cDNA Libraries

cDNA Libraries have been constructed for a suite of tissues, both infected and uninfected, from Chinese and American chestnuts, American beech, and both red and white oaks by K.M. Baier & W.A. Powell at SUNY-ESF.

You can also search for an EST or contig by name, organism or BLAST annotation.

Libraries used for Pyrosequencing (454 Platform)
Name Description EST count
ABWP1 American Beech, Whole Plant Tissues, Tree 1 35424
ABWP2 American Beech, Whole Plant Tissues, Tree 2 28829
ACCanker American Chestnut, Canker Tissues 129508
ACHS1n American Chestnut, Healthy Stem Tissues, Tree 1 96148
ACHS2n American Chestnut, Healthy Stem Tissues, Tree 1 92186
ACWP1 American Chestnut, Whole Plant Tissues, Tree 1 47653
ACWP2 American Chestnut, Whole Plant Tissues, Tree 2 33288
CCCanker Chinese Chestnut, Canker Tissues 235635
CCMHS Chinese Chestnut, Vanuxem, Healthy Stem 228594
CCNHS Chinese Chestnut, Nanking, Healthy Stem 259859
CCWP1 Chinese Chestnut, Whole Plant, Tree 1 60445
CCWP2 Chinese Chestnut, Whole Plant, Tree 2 53939
ROA Red Oak, Above Ground Tissues 131630
ROB Red Oak, Below Ground Tissues 145524
WOA White Oak, Above Ground Tissues 119385
WOB White Oak, Below Ground Tissues 83821
Libraries used for Sanger Sequencing
Name Description EST count
CMFMEa Chinese Chestnut, Flower fraction 678 213
CMFMEb Chinese Chestnut, Flower fraction 9 1043
CMFMEc Chinese Chestnut, Flower fraction 10 1030
CMLMEa Chinese Chestnut, Leaf fraction 567 1029
CMLMEb Chinese Chestnut, Leaf fraction 8 1316
CMRMEb Chinese Chestnut, Root fraction 8 1071
CMSMEa Chinese Chestnut, Stem fraction 678 1364
CMSMEb Chinese Chestnut, Stem fraction 9 1035