Unigene Oall_v2 SSRs with in silico polymorphism

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The SSR finding software has flagged some sequences with a * because they have some evidence that they are "polymorphic" based on the underlying alignments of the contigs. The software looks for one of four characteristics: a 2bp or larger gap in consensus sequence in SSR region, multiple 1bp gaps in consensus sequence in SSR region, a gap at either end of consensus with another repeat of the motif at corresponding region of an underlying sequence, a gap of 2bp or more in an underlying sequence. Additionally, these sequences have enough flaking sequence to have primers that amplify the SSR region.
Oall_contig10204_v2_125
Oall_contig10363_v2_349
Oall_contig1163_v2_516
Oall_contig11981_v2_105
Oall_contig13001_v2_129
Oall_contig15092_v2_130
Oall_contig15205_v2_180
Oall_contig15398_v2_45
Oall_contig15429_v2_139
Oall_contig15459_v2_126
Oall_contig15520_v2_144
Oall_contig15565_v2_661
Oall_contig15886_v2_255
Oall_contig16273_v2_207
Oall_contig1681_v2_60
Oall_contig17247_v2_187
Oall_contig17415_v2_351
Oall_contig17599_v2_232
Oall_contig18305_v2_145
Oall_contig18305_v2_215
Oall_contig18346_v2_168
Oall_contig18934_v2_91
Oall_contig19027_v2_32
Oall_contig19121_v2_48
Oall_contig19601_v2_67
Oall_contig19825_v2_253
Oall_contig20455_v2_397
Oall_contig20556_v2_91
Oall_contig20556_v2_296
Oall_contig21956_v2_241
Oall_contig22395_v2_196
Oall_contig22567_v2_384
Oall_contig22602_v2_121
Oall_contig22924_v2_211
Oall_contig23035_v2_336
Oall_contig23172_v2_37
Oall_contig23333_v2_156
Oall_contig2415_v2_98
Oall_contig25036_v2_54
Oall_contig26005_v2_138
Oall_contig26729_v2_116
Oall_contig26841_v2_416
Oall_contig26_v2_79
Oall_contig27524_v2_57
Oall_contig28313_v2_360
Oall_contig28547_v2_183
Oall_contig28608_v2_126
Oall_contig29581_v2_182
Oall_contig3314_v2_462
Oall_contig33204_v2_128
Oall_contig33432_v2_65
Oall_contig33433_v2_370
Oall_contig33801_v2_194
Oall_contig348_v2_35
Oall_contig35358_v2_547
Oall_contig35465_v2_468
Oall_contig35989_v2_204
Oall_contig36079_v2_114
Oall_contig36554_v2_205
Oall_contig37002_v2_206
Oall_contig37947_v2_296
Oall_contig3856_v2_331
Oall_contig39988_v2_96
Oall_contig40196_v2_259
Oall_contig6149_v2_105
Oall_contig684_v2_89
Oall_contig7054_v2_864
Oall_contig7054_v2_832
Oall_contig7471_v2_230
Oall_contig7618_v2_121
Oall_contig7650_v2_222
Oall_contig7650_v2_250
Oall_contig8790_v2_214
Oall_contig9023_v2_235
Oall_contig9967_v2_163

All Other SSRs

Oall_contig10000_v2_785
Oall_contig10000_v2_799
Oall_contig10003_v2_134
Oall_contig10003_v2_158
Oall_contig10003_v2_228
Oall_contig10006_v2_16
Oall_contig10007_v2_110
Oall_contig10007_v2_186
Oall_contig10008_v2_104
Oall_contig10008_v2_151
Oall_contig10008_v2_189
Oall_contig10010_v2_321
Oall_contig10011_v2_130
Oall_contig10016_v2_344
Oall_contig10018_v2_341
Oall_contig10019_v2_337
Oall_contig10024_v2_443
Oall_contig10024_v2_267
Oall_contig10033_v2_215
Oall_contig10036_v2_218
Oall_contig10044_v2_575
Oall_contig10045_v2_35
Oall_contig10047_v2_27
Oall_contig1004_v2_157
Oall_contig10067_v2_443
Oall_contig10073_v2_69
Oall_contig10074_v2_56
Oall_contig10074_v2_534
Oall_contig10076_v2_520
Oall_contig10090_v2_256
Oall_contig10097_v2_218
Oall_contig10100_v2_29
Oall_contig10100_v2_106
Oall_contig10102_v2_1396
Oall_contig10106_v2_13
Oall_contig10109_v2_1039
Oall_contig1010_v2_217
Oall_contig10110_v2_11
Oall_contig1012_v2_1131
Oall_contig1012_v2_982
Oall_contig1012_v2_1025
Oall_contig1013_v2_530
Oall_contig1013_v2_425
Oall_contig10140_v2_196
Oall_contig10140_v2_229
Oall_contig10143_v2_58
Oall_contig10143_v2_152
Oall_contig10143_v2_36
Oall_contig10145_v2_346
Oall_contig10148_v2_178
Oall_contig10149_v2_2
Oall_contig10153_v2_132
Oall_contig10153_v2_170
Oall_contig10155_v2_146
Oall_contig10159_v2_183
Oall_contig10159_v2_102
Oall_contig10164_v2_23
Oall_contig10164_v2_637
Oall_contig10166_v2_213
Oall_contig10171_v2_70
Oall_contig10178_v2_179
Oall_contig10180_v2_213
Oall_contig10183_v2_392
Oall_contig10192_v2_1679
Oall_contig10192_v2_1296
Oall_contig10195_v2_671
Oall_contig10204_v2_260
Oall_contig10204_v2_202
Oall_contig10205_v2_30
Oall_contig10215_v2_86
Oall_contig10216_v2_89
Oall_contig10220_v2_14
Oall_contig10220_v2_124
Oall_contig10220_v2_39
Oall_contig10238_v2_438
Oall_contig10240_v2_337
Oall_contig1024_v2_33
Oall_contig10250_v2_18
Oall_contig10258_v2_496
Oall_contig10261_v2_271
Oall_contig10261_v2_302
Oall_contig10261_v2_352
Oall_contig10261_v2_395
Oall_contig10262_v2_265
Oall_contig10269_v2_42
Oall_contig10285_v2_1484
Oall_contig10286_v2_302
Oall_contig10299_v2_161
Oall_contig1029_v2_16
Oall_contig1029_v2_465
Oall_contig102_v2_9
Oall_contig102_v2_177
Oall_contig102_v2_333
Oall_contig102_v2_259
Oall_contig102_v2_1826
Oall_contig10301_v2_161
Oall_contig10301_v2_667
Oall_contig10305_v2_558
Oall_contig10307_v2_330
Oall_contig10307_v2_302
Oall_contig10310_v2_110
Oall_contig10317_v2_33
Oall_contig10318_v2_558
Oall_contig10318_v2_569
Oall_contig10318_v2_697
Oall_contig10318_v2_841
Oall_contig10321_v2_453
Oall_contig10323_v2_51
Oall_contig10324_v2_738
Oall_contig10325_v2_332
Oall_contig10325_v2_282
Oall_contig10325_v2_102
Oall_contig10328_v2_9
Oall_contig10328_v2_125
Oall_contig10328_v2_174
Oall_contig10328_v2_382
Oall_contig10336_v2_1
Oall_contig10336_v2_66
Oall_contig1034_v2_240
Oall_contig1034_v2_510
Oall_contig10350_v2_303
Oall_contig10354_v2_12
Oall_contig10360_v2_116
Oall_contig10363_v2_28
Oall_contig10363_v2_265
Oall_contig10367_v2_205
Oall_contig10372_v2_257
Oall_contig10372_v2_313
Oall_contig10372_v2_382
Oall_contig10372_v2_404
Oall_contig10372_v2_441
Oall_contig10372_v2_611
Oall_contig10372_v2_589
Oall_contig10374_v2_40
Oall_contig10388_v2_171
Oall_contig10393_v2_96
Oall_contig10395_v2_150
Oall_contig10396_v2_502
Oall_contig10406_v2_10
Oall_contig1040_v2_35
Oall_contig1040_v2_77
Oall_contig1040_v2_427
Oall_contig10415_v2_571
Oall_contig10419_v2_676
Oall_contig10419_v2_741
Oall_contig10425_v2_10
Oall_contig10433_v2_1
Oall_contig10434_v2_421
Oall_contig10435_v2_145
Oall_contig10449_v2_181
Oall_contig1044_v2_844
Oall_contig1044_v2_586
Oall_contig1045_v2_24
Oall_contig10461_v2_233
Oall_contig10474_v2_730
Oall_contig10476_v2_202
Oall_contig1047_v2_435
Oall_contig10489_v2_37
Oall_contig10494_v2_1180
Oall_contig10498_v2_610
Oall_contig1049_v2_1228
Oall_contig104_v2_632
Oall_contig104_v2_400
Oall_contig10510_v2_216
Oall_contig10511_v2_888
Oall_contig10513_v2_538
Oall_contig10525_v2_779
Oall_contig10535_v2_278
Oall_contig10536_v2_1054
Oall_contig10558_v2_190
Oall_contig10563_v2_6
Oall_contig10575_v2_1377
Oall_contig10575_v2_1557
Oall_contig10582_v2_509
Oall_contig10582_v2_561
Oall_contig10584_v2_454
Oall_contig10584_v2_728
Oall_contig10592_v2_212
Oall_contig10593_v2_388
Oall_contig10593_v2_331
Oall_contig10596_v2_220
Oall_contig10603_v2_296
Oall_contig10604_v2_207
Oall_contig10605_v2_309
Oall_contig10607_v2_31
Oall_contig10615_v2_341
Oall_contig10616_v2_30
Oall_contig10616_v2_857
Oall_contig10621_v2_1
Oall_contig10621_v2_593
Oall_contig10627_v2_243
Oall_contig10627_v2_355
Oall_contig10628_v2_489
Oall_contig10631_v2_52
Oall_contig10642_v2_2120
Oall_contig10645_v2_1485
Oall_contig10645_v2_1511
Oall_contig10646_v2_151
Oall_contig10646_v2_165
Oall_contig10652_v2_91
Oall_contig10653_v2_1460
Oall_contig10653_v2_3320
Oall_contig10656_v2_67
Oall_contig10662_v2_39
Oall_contig1066_v2_137
Oall_contig10677_v2_94
Oall_contig10682_v2_6
Oall_contig10685_v2_884
Oall_contig10691_v2_285
Oall_contig10703_v2_92
Oall_contig10703_v2_1149
Oall_contig10704_v2_303
Oall_contig10704_v2_373
Oall_contig1070_v2_65
Oall_contig10720_v2_323
Oall_contig10728_v2_600
Oall_contig10731_v2_331
Oall_contig10735_v2_109
Oall_contig10735_v2_253
Oall_contig10737_v2_30
Oall_contig10740_v2_713
Oall_contig10751_v2_200
Oall_contig10752_v2_43
Oall_contig10752_v2_63
Oall_contig10759_v2_283
Oall_contig10759_v2_394
Oall_contig10775_v2_173
Oall_contig10785_v2_2625
Oall_contig10786_v2_218
Oall_contig10791_v2_178
Oall_contig10791_v2_3
Oall_contig107_v2_59
Oall_contig10806_v2_71
Oall_contig1080_v2_63
Oall_contig10841_v2_2149
Oall_contig10844_v2_193
Oall_contig10846_v2_1191
Oall_contig10855_v2_42
Oall_contig10855_v2_982
Oall_contig10859_v2_10
Oall_contig10871_v2_1
Oall_contig10874_v2_20
Oall_contig10876_v2_128
Oall_contig10876_v2_167
Oall_contig10876_v2_182
Oall_contig10887_v2_1001
Oall_contig10889_v2_442
Oall_contig10895_v2_10
Oall_contig10907_v2_776
Oall_contig10907_v2_862
Oall_contig10911_v2_846
Oall_contig10911_v2_296
Oall_contig10911_v2_686
Oall_contig1092_v2_487
Oall_contig10957_v2_373
Oall_contig10968_v2_82
Oall_contig10968_v2_224
Oall_contig10973_v2_266
Oall_contig10978_v2_353
Oall_contig10978_v2_487
Oall_contig10980_v2_337
Oall_contig10986_v2_196
Oall_contig1098_v2_237
Oall_contig1098_v2_255
Oall_contig10991_v2_80
Oall_contig10996_v2_136
Oall_contig1099_v2_439
Oall_contig10_v2_140
Oall_contig11001_v2_149
Oall_contig11003_v2_147
Oall_contig11003_v2_1526
Oall_contig11014_v2_18
Oall_contig11014_v2_787
Oall_contig11014_v2_104
Oall_contig11016_v2_137
Oall_contig11016_v2_550
Oall_contig11021_v2_306
Oall_contig11030_v2_51
Oall_contig11030_v2_481
Oall_contig11030_v2_1042
Oall_contig11030_v2_1249
Oall_contig11032_v2_239
Oall_contig11032_v2_203
Oall_contig11033_v2_369
Oall_contig11036_v2_1329
Oall_contig11036_v2_569
Oall_contig11044_v2_106
Oall_contig11046_v2_17
Oall_contig11052_v2_915
Oall_contig11057_v2_333
Oall_contig11058_v2_328
Oall_contig11064_v2_201
Oall_contig11072_v2_160
Oall_contig11072_v2_202
Oall_contig11088_v2_167
Oall_contig1108_v2_184
Oall_contig11124_v2_350
Oall_contig11128_v2_844
Oall_contig11134_v2_409
Oall_contig11134_v2_328
Oall_contig11134_v2_364
Oall_contig1113_v2_271
Oall_contig11150_v2_823
Oall_contig11155_v2_3
Oall_contig1115_v2_2756
Oall_contig11161_v2_83
Oall_contig11166_v2_340
Oall_contig11171_v2_50
Oall_contig11179_v2_312
Oall_contig1117_v2_53
Oall_contig11182_v2_1065
Oall_contig11186_v2_192
Oall_contig11186_v2_415
Oall_contig11192_v2_292
Oall_contig11193_v2_412
Oall_contig11195_v2_1
Oall_contig11200_v2_638
Oall_contig1121_v2_21
Oall_contig11236_v2_696
Oall_contig11242_v2_178
Oall_contig11245_v2_1470
Oall_contig11245_v2_1545
Oall_contig11253_v2_209
Oall_contig11268_v2_4
Oall_contig11283_v2_59
Oall_contig11289_v2_415
Oall_contig1128_v2_135
Oall_contig11294_v2_24
Oall_contig11294_v2_215
Oall_contig11296_v2_46
Oall_contig11296_v2_1133
Oall_contig11298_v2_255
Oall_contig11311_v2_117
Oall_contig11311_v2_127
Oall_contig11317_v2_81
Oall_contig1132_v2_297
Oall_contig11336_v2_81
Oall_contig11336_v2_108
Oall_contig11354_v2_21
Oall_contig11359_v2_1518
Oall_contig11360_v2_85
Oall_contig11360_v2_394
Oall_contig11364_v2_219
Oall_contig11379_v2_729
Oall_contig11380_v2_223
Oall_contig11380_v2_329
Oall_contig11383_v2_133
Oall_contig11389_v2_826
Oall_contig11389_v2_860
Oall_contig11390_v2_2257
Oall_contig11390_v2_2618
Oall_contig113_v2_451
Oall_contig113_v2_564
Oall_contig11415_v2_16
Oall_contig11419_v2_21
Oall_contig11426_v2_277
Oall_contig11430_v2_55
Oall_contig11430_v2_297
Oall_contig11430_v2_2139
Oall_contig11446_v2_1
Oall_contig11451_v2_36
Oall_contig11452_v2_303
Oall_contig11453_v2_163
Oall_contig11458_v2_755
Oall_contig11468_v2_1244
Oall_contig11473_v2_219
Oall_contig11479_v2_370
Oall_contig11479_v2_387
Oall_contig11479_v2_238
Oall_contig11480_v2_82
Oall_contig11480_v2_32
Oall_contig11480_v2_22
Oall_contig11484_v2_1019
Oall_contig11484_v2_880
Oall_contig11498_v2_33
Oall_contig11501_v2_106
Oall_contig11501_v2_662
Oall_contig11505_v2_412
Oall_contig11510_v2_177
Oall_contig11510_v2_189
Oall_contig11524_v2_18
Oall_contig1152_v2_51
Oall_contig11540_v2_57
Oall_contig11544_v2_1359
Oall_contig11560_v2_44
Oall_contig11564_v2_681
Oall_contig11564_v2_722
Oall_contig11567_v2_89
Oall_contig11573_v2_135
Oall_contig11574_v2_213
Oall_contig11577_v2_247
Oall_contig11578_v2_1067
Oall_contig11579_v2_33
Oall_contig11580_v2_1101
Oall_contig11590_v2_55
Oall_contig11590_v2_127
Oall_contig11591_v2_886
Oall_contig11596_v2_874
Oall_contig11596_v2_497
Oall_contig11618_v2_77
Oall_contig1161_v2_140
Oall_contig11626_v2_1354
Oall_contig11632_v2_565
Oall_contig11634_v2_589
Oall_contig11634_v2_143
Oall_contig11638_v2_2021
Oall_contig11638_v2_2259
Oall_contig1163_v2_539
Oall_contig11640_v2_366
Oall_contig11640_v2_1245
Oall_contig11642_v2_173
Oall_contig11642_v2_338
Oall_contig11649_v2_20
Oall_contig11655_v2_4
Oall_contig1165_v2_40
Oall_contig11660_v2_1649
Oall_contig11662_v2_320
Oall_contig11664_v2_600
Oall_contig11664_v2_622
Oall_contig11669_v2_42
Oall_contig11676_v2_121
Oall_contig11678_v2_413
Oall_contig11678_v2_485
Oall_contig11686_v2_37
Oall_contig11689_v2_570
Oall_contig11691_v2_367
Oall_contig11692_v2_109
Oall_contig11693_v2_791
Oall_contig11695_v2_177
Oall_contig116_v2_109
Oall_contig11703_v2_47
Oall_contig11705_v2_513
Oall_contig11707_v2_10
Oall_contig11712_v2_350
Oall_contig11715_v2_329
Oall_contig11715_v2_223
Oall_contig11722_v2_7
Oall_contig11725_v2_283
Oall_contig11740_v2_19
Oall_contig11740_v2_100
Oall_contig11751_v2_3
Oall_contig11751_v2_630
Oall_contig11754_v2_841
Oall_contig11754_v2_952
Oall_contig11759_v2_368
Oall_contig11763_v2_1
Oall_contig11768_v2_333
Oall_contig11769_v2_400
Oall_contig11775_v2_118
Oall_contig11775_v2_648
Oall_contig11795_v2_121
Oall_contig11797_v2_146
Oall_contig11800_v2_115
Oall_contig11800_v2_212
Oall_contig11812_v2_138
Oall_contig11820_v2_341
Oall_contig11821_v2_527
Oall_contig11821_v2_537
Oall_contig11821_v2_270
Oall_contig11826_v2_1
Oall_contig11833_v2_370
Oall_contig11833_v2_439
Oall_contig11847_v2_36
Oall_contig11850_v2_513
Oall_contig11850_v2_570
Oall_contig11850_v2_379
Oall_contig11857_v2_17
Oall_contig11861_v2_113
Oall_contig11861_v2_1008
Oall_contig11861_v2_152
Oall_contig11878_v2_502
Oall_contig11888_v2_218
Oall_contig11890_v2_358
Oall_contig11897_v2_168
Oall_contig118_v2_162
Oall_contig118_v2_214
Oall_contig11907_v2_172
Oall_contig1190_v2_17
Oall_contig1190_v2_179
Oall_contig11910_v2_214
Oall_contig11911_v2_1
Oall_contig11911_v2_178
Oall_contig11911_v2_726
Oall_contig11911_v2_561
Oall_contig11911_v2_1259
Oall_contig1191_v2_24
Oall_contig1191_v2_60
Oall_contig1191_v2_182
Oall_contig11942_v2_1
Oall_contig11942_v2_807
Oall_contig11949_v2_428
Oall_contig11962_v2_1
Oall_contig11974_v2_1007
Oall_contig11974_v2_1090
Oall_contig11981_v2_41
Oall_contig11981_v2_151
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