AC454_contig27987_v2

NameAC454_contig27987_v2
AccessionID2121018
Sequence
ACTTACAACCAACCAAGTTGCTTAGAAATAAATAAAGCATTCACTGTTAC
aAAAATATGCTGCATTGGTGCCATAAGTTCATAACCCCAATCCCCAACTA
AGTAGTTTTGTAATAATCTCAGTATAATAATCTCATT
Length137
Typecontig
Organism American Chestnut

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References

Dababase Accession
GFF_source SeqManPro

ESTs in this contig

Type Feature Position
EST ACWP2_038512_3941_1259 0-123
EST ACCanker_020477_3046_0669 31-137

Blast Hits to Contigs V2 CC454

Analysis Date: 11-03-2009 (Blast: AC454_contigs_v2_vs_CC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
CC454_contig40366_v26.40717e-2190.24%
CC454_contig40366_v2
HSP 1 
Score: 94.0837 bits (199), Expect = 6.40717e-21
Identity = 37/41 (90.24%), Postives = 38/41 (92.68%), Query Frame = -3
Query:   13 *DYYTEIITKLLSWGLGL*TYGTNAAYFCNSECFIYF*ATW 135
            *DYYTEIITKLLSWGLGL*TYGTNAAYFCNSECFI F + W
Sbjct:   16 *DYYTEIITKLLSWGLGL*TYGTNAAYFCNSECFILFLSNW 138

HSP 2 
Score: 90.8762 bits (192), Expect = 5.91845e-20
Identity = 38/42 (90.48%), Postives = 38/42 (90.48%), Query Frame = 3
Query:   12 TKLLRNK*SIHCYKNMLHWCHKFITPIPN*VVL**SQYNNLI 137
            T  L  K*SIHCYKNMLHWCHKFITPIPN*VVL**SQYNNLI
Sbjct:   15 TSCLGIK*SIHCYKNMLHWCHKFITPIPN*VVL**SQYNNLI 140

HSP 3 
Score: 90.418 bits (191), Expect = 8.13097e-20
Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = -1
Query:   24 NEIIILRLLQNYLVGDWGYELMAPMQHIFVTVNALFIS 137
            NEIIILRLLQNYLVGDWGYELMAPMQHIFVTVNALF S
Sbjct:   27 NEIIILRLLQNYLVGDWGYELMAPMQHIFVTVNALFYS 140

HSP 4 
Score: 83.5449 bits (176), Expect = 9.53148e-18
Identity = 37/41 (90.24%), Postives = 37/41 (90.24%), Query Frame = 1
Query:   13 PSCLEINKAFTVTKICCIGAISS*PQSPTK*FCNNLSIIIS 135
            P   E NKAFTVTKICCIGAISS*PQSPTK*FCNNLSIIIS
Sbjct:   16 PVA*E*NKAFTVTKICCIGAISS*PQSPTK*FCNNLSIIIS 138

Blast Hits to Contigs V2 CCall

Analysis Date: 11-03-2009 (Blast: AC454_contigs_v2_vs_CCall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
CCall_contig14711_v26.63876e-2190.24%
CCall_contig14711_v2
HSP 1 
Score: 94.0837 bits (199), Expect = 6.63876e-21
Identity = 37/41 (90.24%), Postives = 38/41 (92.68%), Query Frame = -3
Query:   13 *DYYTEIITKLLSWGLGL*TYGTNAAYFCNSECFIYF*ATW 135
            *DYYTEIITKLLSWGLGL*TYGTNAAYFCNSECFI F + W
Sbjct:   16 *DYYTEIITKLLSWGLGL*TYGTNAAYFCNSECFILFLSNW 138

HSP 2 
Score: 90.8762 bits (192), Expect = 6.13237e-20
Identity = 38/42 (90.48%), Postives = 38/42 (90.48%), Query Frame = 3
Query:   12 TKLLRNK*SIHCYKNMLHWCHKFITPIPN*VVL**SQYNNLI 137
            T  L  K*SIHCYKNMLHWCHKFITPIPN*VVL**SQYNNLI
Sbjct:   15 TSCLGIK*SIHCYKNMLHWCHKFITPIPN*VVL**SQYNNLI 140

HSP 3 
Score: 90.418 bits (191), Expect = 8.42486e-20
Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = -1
Query:   24 NEIIILRLLQNYLVGDWGYELMAPMQHIFVTVNALFIS 137
            NEIIILRLLQNYLVGDWGYELMAPMQHIFVTVNALF S
Sbjct:   27 NEIIILRLLQNYLVGDWGYELMAPMQHIFVTVNALFYS 140

HSP 4 
Score: 83.5449 bits (176), Expect = 9.87599e-18
Identity = 37/41 (90.24%), Postives = 37/41 (90.24%), Query Frame = 1
Query:   13 PSCLEINKAFTVTKICCIGAISS*PQSPTK*FCNNLSIIIS 135
            P   E NKAFTVTKICCIGAISS*PQSPTK*FCNNLSIIIS
Sbjct:   16 PVA*E*NKAFTVTKICCIGAISS*PQSPTK*FCNNLSIIIS 138

Blast Hits to Contig V2 Oall

Analysis Date: 11-03-2009 (Blast: AC454_contigs_v2_vs_Oall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
Oall_contig18528_v26.55785e-1682.86%
Oall_contig18528_v2
HSP 1 
Score: 77.13 bits (162), Expect = 6.55785e-16
Identity = 29/35 (82.86%), Postives = 32/35 (91.43%), Query Frame = -3
Query:   13 IITKLLSWGLGL*TYGTNAAYFCNSECFIYF*ATW 117
            IIT+LL+WGLGL*TYGTNAAYFCNSECFI F + W
Sbjct:  113 IITRLLNWGLGL*TYGTNAAYFCNSECFILFLSNW 217

HSP 2 
Score: 73.9225 bits (155), Expect = 6.05764e-15
Identity = 30/35 (85.71%), Postives = 30/35 (85.71%), Query Frame = 3
Query:   12 TKLLRNK*SIHCYKNMLHWCHKFITPIPN*VVL** 116
            T  L  K*SIHCYKNMLHWCH FITPIPN*VVL**
Sbjct:  112 TSCLETK*SIHCYKNMLHWCHMFITPIPN*VVL** 216

HSP 3 
Score: 68.424 bits (143), Expect = 2.73853e-13
Identity = 26/29 (89.66%), Postives = 28/29 (96.55%), Query Frame = -1
Query:   30 LLQNYLVGDWGYELMAPMQHIFVTVNALF 116
            LLQ+YL+GDWGYE MAPMQHIFVTVNALF
Sbjct:  130 LLQDYLIGDWGYEHMAPMQHIFVTVNALF 216

HSP 4 
Score: 62.9255 bits (131), Expect = 1.23803e-11
Identity = 26/29 (89.66%), Postives = 26/29 (89.66%), Query Frame = 1
Query:   31 NKAFTVTKICCIGAISS*PQSPTK*FCNN 117
            NKAFTVTKICCIGAI S*PQSP K* CNN
Sbjct:  131 NKAFTVTKICCIGAICS*PQSPIK*SCNN 217

Blast Hits to Contigs V2 WO454

Analysis Date: 11-03-2009 (Blast: AC454_contigs_v2_vs_WO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
WO454_contig2474_v23.22475e-1682.86%
WO454_contig2474_v2
HSP 1 
Score: 77.13 bits (162), Expect = 3.22475e-16
Identity = 29/35 (82.86%), Postives = 32/35 (91.43%), Query Frame = -3
Query:   13 IITKLLSWGLGL*TYGTNAAYFCNSECFIYF*ATW 117
            IIT+LL+WGLGL*TYGTNAAYFCNSECFI F + W
Sbjct:  126 IITRLLNWGLGL*TYGTNAAYFCNSECFILFLSNW 230

HSP 2 
Score: 73.9225 bits (155), Expect = 2.97878e-15
Identity = 30/35 (85.71%), Postives = 30/35 (85.71%), Query Frame = 3
Query:   12 TKLLRNK*SIHCYKNMLHWCHKFITPIPN*VVL** 116
            T  L  K*SIHCYKNMLHWCH FITPIPN*VVL**
Sbjct:  127 TSCLETK*SIHCYKNMLHWCHMFITPIPN*VVL** 231

HSP 3 
Score: 68.424 bits (143), Expect = 1.34664e-13
Identity = 26/29 (89.66%), Postives = 28/29 (96.55%), Query Frame = -1
Query:   30 LLQNYLVGDWGYELMAPMQHIFVTVNALF 116
            LLQ+YL+GDWGYE MAPMQHIFVTVNALF
Sbjct:  127 LLQDYLIGDWGYEHMAPMQHIFVTVNALF 213

HSP 4 
Score: 62.9255 bits (131), Expect = 6.08788e-12
Identity = 26/29 (89.66%), Postives = 26/29 (89.66%), Query Frame = 1
Query:   31 NKAFTVTKICCIGAISS*PQSPTK*FCNN 117
            NKAFTVTKICCIGAI S*PQSP K* CNN
Sbjct:  126 NKAFTVTKICCIGAICS*PQSPIK*SCNN 212

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