AC454_contig27985_v2

NameAC454_contig27985_v2
AccessionID2121012
Sequence
GTTGAGGCGCTACAGGGAAATAGTMCCAAAATTACGACTTGCAGGACCAA
CTTCGTTTGCACCTGTAATTGAGATGGCCATGACCATCGTGGAGCAGAGT
GGGGGCCAATATCATGTGTTAGTAATAATTGCAGATGGACAGGTAACAAG
AAGTGTTGATACTGAGCATAGGAAAGCTAAGTCCGCAAGAGCAGAAGACT
GGTCGATCGCCTAGTTTGTTGGAACGCAAGTCTTAACGTTTTC
Length243
Typecontig
Organism American Chestnut

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References

Dababase Accession
GFF_source SeqManPro

ESTs in this contig

Type Feature Position
EST ACWP1_122526_2277_0919 0-243
EST ACCanker_094402_0313_2335 14-118

InterProScan Analysis

Analysis Date: 11-03-2009 (Interpro: AC454_contigs_v2)
SEQUENCE: AC454_contig27985_v2_2_ORF1 CRC64: 7286E500E3693D50 LENGTH: 70 aa
No hits reported.
SEQUENCE: AC454_contig27985_v2_6_ORF2 CRC64: 620A10A6B94EA7A0 LENGTH: 59 aa
No hits reported.
SEQUENCE: AC454_contig27985_v2_2_ORF1 CRC64: 7286E500E3693D50 LENGTH: 70 aa
No hits reported.
SEQUENCE: AC454_contig27985_v2_6_ORF2 CRC64: 620A10A6B94EA7A0 LENGTH: 59 aa
No hits reported.

Blast Hits to Uniprot

Analysis Date: 11-03-2009 (Blast: AC454_v2_uniprot)
Best 10 Hits Shown | Show Best 25 Hits | Show All Hits
Note: Click a description for more details.
Match Name E value Identity
RGLG1_ARATH6.67845e-2289.29%
E3 ubiquitin-protein ligase RGLG1 OS=Arabidopsis thaliana GN=RGLG1 PE=1 SV=1
HSP 1 
Score: 104.375 bits (259), Expect = 6.67845e-22
Identity = 50/56 (89.29%), Postives = 54/56 (96.43%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEH 169
            L RYREIVP+L+LAGPTSFAP+IEMAMT+VEQS GQYHVLVIIADGQVTRSVDTEH
Sbjct:  242 LARYREIVPQLKLAGPTSFAPIIEMAMTVVEQSSGQYHVLVIIADGQVTRSVDTEH 297

HSP 2 
Score: 23.0978 bits (48), Expect = 6.67845e-22
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  171 GKLSPQEQKT 200
            G+LSPQEQKT
Sbjct:  298 GRLSPQEQKT 307

B9RAR5_RICCO8.51711e-2291.07%
Copine, putative OS=Ricinus communis GN=RCOM_1508170 PE=4 SV=1
HSP 1 
Score: 106.301 bits (264), Expect = 8.51711e-22
Identity = 51/56 (91.07%), Postives = 55/56 (98.21%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEH 169
            LRRYRE+VP LRLAGPTSFAP+IEMA+TIVEQSGGQYHVLVIIADGQVTRSVDT+H
Sbjct:  174 LRRYRELVPHLRLAGPTSFAPIIEMAITIVEQSGGQYHVLVIIADGQVTRSVDTQH 229

B9GIK6_POPTR8.72381e-2291.07%
Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_174078 PE=4 SV=1
HSP 1 
Score: 104.375 bits (259), Expect = 8.72381e-22
Identity = 51/56 (91.07%), Postives = 53/56 (94.64%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEH 169
            L RYREIVP LRLAGPTSFAP+IEMAMTIVEQS GQYHVL+IIADGQVTRSVDTEH
Sbjct:  119 LSRYREIVPNLRLAGPTSFAPIIEMAMTIVEQSAGQYHVLLIIADGQVTRSVDTEH 174

HSP 2 
Score: 22.7126 bits (47), Expect = 8.72381e-22
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  171 GKLSPQEQKT 200
            G+LSPQEQKT
Sbjct:  175 GQLSPQEQKT 184

B9I3I7_POPTR1.11237e-2192.86%
Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_662072 PE=4 SV=1
HSP 1 
Score: 105.916 bits (263), Expect = 1.11237e-21
Identity = 52/56 (92.86%), Postives = 55/56 (98.21%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEH 169
            LRRYRE+VP LRLAGPTSFAPVIEMA+TIVEQSGGQYHVL+IIADGQVTRSVDTEH
Sbjct:  185 LRRYRELVPCLRLAGPTSFAPVIEMAITIVEQSGGQYHVLLIIADGQVTRSVDTEH 240

A7PCN7_VITVI2.4781e-2187.50%
Chromosome chr17 scaffold_12, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00015941001 PE=4 SV=1
HSP 1 
Score: 104.76 bits (260), Expect = 2.4781e-21
Identity = 49/56 (87.50%), Postives = 55/56 (98.21%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEH 169
            L+RYRE+VP LRLAGPTSFAP++EMA+TIVEQSGGQYHVL+IIADGQVTRSVDTEH
Sbjct:  177 LKRYRELVPHLRLAGPTSFAPIVEMAITIVEQSGGQYHVLLIIADGQVTRSVDTEH 232

A7PM08_VITVI3.24297e-2189.29%
Chromosome chr14 scaffold_21, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00020639001 PE=4 SV=1
HSP 1 
Score: 102.449 bits (254), Expect = 3.24297e-21
Identity = 50/56 (89.29%), Postives = 52/56 (92.86%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEH 169
            L RYREIVP+LRLAGPTSFAP+IEMAMTIV  SGGQYHVLVIIADGQVTRSVDT H
Sbjct:  202 LSRYREIVPRLRLAGPTSFAPIIEMAMTIVNHSGGQYHVLVIIADGQVTRSVDTAH 257

HSP 2 
Score: 22.7126 bits (47), Expect = 3.24297e-21
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  171 GKLSPQEQKT 200
            G+LSPQEQKT
Sbjct:  258 GQLSPQEQKT 267

B9DGM7_ARATH4.21846e-2187.50%
AT5G14420 protein OS=Arabidopsis thaliana GN=AT5G14420 PE=2 SV=1
HSP 1 
Score: 102.064 bits (253), Expect = 4.21846e-21
Identity = 49/56 (87.50%), Postives = 55/56 (98.21%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEH 169
            L RY+EIVP+L+LAGPTSFAP+I+MAMTIVEQSGGQYHVLVIIADGQVTRSVDTE+
Sbjct:  208 LSRYKEIVPQLKLAGPTSFAPIIDMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEN 263

HSP 2 
Score: 22.7126 bits (47), Expect = 4.21846e-21
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  171 GKLSPQEQKT 200
            G+LSPQEQKT
Sbjct:  264 GQLSPQEQKT 273

RGLG2_ARATH4.21846e-2187.50%
E3 ubiquitin-protein ligase RGLG2 OS=Arabidopsis thaliana GN=RGLG2 PE=1 SV=1
HSP 1 
Score: 102.064 bits (253), Expect = 4.21846e-21
Identity = 49/56 (87.50%), Postives = 55/56 (98.21%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEH 169
            L RY+EIVP+L+LAGPTSFAP+I+MAMTIVEQSGGQYHVLVIIADGQVTRSVDTE+
Sbjct:  208 LSRYKEIVPQLKLAGPTSFAPIIDMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEN 263

HSP 2 
Score: 22.7126 bits (47), Expect = 4.21846e-21
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  171 GKLSPQEQKT 200
            G+LSPQEQKT
Sbjct:  264 GQLSPQEQKT 273

B9RMT9_RICCO5.48679e-2185.71%
Copine, putative OS=Ricinus communis GN=RCOM_1083740 PE=4 SV=1
HSP 1 
Score: 102.834 bits (255), Expect = 5.48679e-21
Identity = 48/56 (85.71%), Postives = 55/56 (98.21%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEH 169
            L RYREIVP+LRLAGPTSFAP+I+MA+TIVEQSGGQYHVL+IIADGQVTRS+DT+H
Sbjct:  194 LTRYREIVPQLRLAGPTSFAPIIDMAITIVEQSGGQYHVLLIIADGQVTRSIDTQH 249

HSP 2 
Score: 21.557 bits (44), Expect = 5.48679e-21
Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  171 GKLSPQEQKT 200
            G+LSPQEQ+T
Sbjct:  250 GQLSPQEQRT 259

Q08ET6_CAPAN1.20799e-2092.59%
RING-finger protein OS=Capsicum annuum GN=RFP1 PE=2 SV=1
HSP 1 
Score: 100.523 bits (249), Expect = 1.20799e-20
Identity = 50/54 (92.59%), Postives = 53/54 (98.15%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDT 163
            L RYREIVP+L+LAGPTSFAPVIEMAMTIVEQSGGQYHVL+IIADGQVTRSVDT
Sbjct:  200 LFRYREIVPQLKLAGPTSFAPVIEMAMTIVEQSGGQYHVLLIIADGQVTRSVDT 253

HSP 2 
Score: 22.7126 bits (47), Expect = 1.20799e-20
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  171 GKLSPQEQKT 200
            G+LSPQEQKT
Sbjct:  256 GQLSPQEQKT 265

Blast Hits to Contigs V2 CC454

Analysis Date: 11-03-2009 (Blast: AC454_contigs_v2_vs_CC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
CC454_contig24084_v22.33796e-2790.91%
CC454_contig24084_v2
HSP 1 
Score: 117.452 bits (250), Expect = 2.33796e-27
Identity = 50/55 (90.91%), Postives = 53/55 (96.36%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTE 166
            L RYRE+VP LRLAGPTSFAPVIEMA+TIVEQSGGQYHVL+IIADGQVTRSVDTE
Sbjct:  972 LARYRELVPVLRLAGPTSFAPVIEMAITIVEQSGGQYHVLLIIADGQVTRSVDTE 1136

HSP 2 
Score: 107.372 bits (228), Expect = 2.53161e-24
Identity = 46/55 (83.64%), Postives = 49/55 (89.09%), Query Frame = -1
Query:    1 SVSTLLVTCPSAIITNT*YWPPLCSTMVMAISITGANEVGPASRNFGTISL*RLN 165
            SVSTLLVTCPSAII NT*YWPPLCST+VMAIS+TGAN+VGPASR  GT SL R N
Sbjct:  973 SVSTLLVTCPSAIINNT*YWPPLCSTIVMAISMTGANDVGPASRRTGTNSLYRAN 1137

HSP 3 
Score: 80.3374 bits (169), Expect = 3.47963e-16
Identity = 28/45 (62.22%), Postives = 37/45 (82.22%), Query Frame = 1
Query:   34 TTCRTNFVCTCN*DGHDHRGAEWGPISCVSNNCRWTGNKKC*Y*A 168
            TTCR N +C+C+*+GH +  A+W P+SCV +NC WTG+KKC*Y*A
Sbjct:  970 TTCRANIICSCH*NGHHYC*AKWWPVSCVIDNC*WTGDKKC*Y*A 1104

HSP 4 
Score: 73.0061 bits (153), Expect = 5.60384e-14
Identity = 33/55 (60.00%), Postives = 38/55 (69.09%), Query Frame = -3
Query:    2 LSINTSCYLSICNYY*HMILAPTLLHDGHGHLNYRCKRSWSCKS*FWXYFPVAPQ 166
            LSINTSC+LSI NY *HMILA TLL++  GH N R K  W CKS*    F ++ Q
Sbjct:  972 LSINTSCHLSISNYQ*HMILATTLLNNSDGHFNDRSK*CWPCKS*NRDQFSISCQ 1136

CC454_contig42908_v21.2032e-2683.64%
CC454_contig42908_v2
HSP 1 
Score: 110.121 bits (234), Expect = 1.2032e-26
Identity = 46/55 (83.64%), Postives = 51/55 (92.73%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTE 166
            L +Y+EIVP LRLAGPTSFAP+IEMA+T VEQS GQYHVLVIIADGQVTRSVDT+
Sbjct: 1437 LLQYKEIVPNLRLAGPTSFAPIIEMAITTVEQSSGQYHVLVIIADGQVTRSVDTQ 1601

HSP 2 
Score: 24.436 bits (47), Expect = 1.2032e-26
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  171 GKLSPQEQKT 200
            G+LSPQEQKT
Sbjct: 1404 GQLSPQEQKT 1433

HSP 3 
Score: 95.4583 bits (202), Expect = 3.09178e-23
Identity = 41/50 (82.00%), Postives = 43/50 (86.00%), Query Frame = -1
Query:   13 VSTLLVTCPSAIITNT*YWPPLCSTMVMAISITGANEVGPASRNFGTISL 162
            VSTLLVTCPSAIIT T YWP LCST+VMAISI GA +VGPASR  GTISL
Sbjct: 1441 VSTLLVTCPSAIITKTWYWPLLCSTVVMAISIIGAKDVGPASRRLGTISL 1590

HSP 4 
Score: 27.6434 bits (54), Expect = 3.09178e-23
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = -3
Query:  170 VFCSCGLSFP 199
            VFCSCGLS+P
Sbjct: 1405 VFCSCGLSWP 1434

HSP 5 
Score: 65.6747 bits (137), Expect = 9.02481e-12
Identity = 27/44 (61.36%), Postives = 32/44 (72.73%), Query Frame = -3
Query:   35 LSINTSCYLSICNYY*HMILAPTLLHDGHGHLNYRCKRSWSCKS 166
            LSINTSCYL I NY+ +M+LA TLL   +GHLN   KR W C+S
Sbjct: 1437 LSINTSCYLPISNYHQNMVLATTLLDSCNGHLNNWSKRCWPCES 1568

CC454_contig45698_v22.89528e-2272.73%
CC454_contig45698_v2
HSP 1 
Score: 100.499 bits (213), Expect = 2.89528e-22
Identity = 40/55 (72.73%), Postives = 50/55 (90.91%), Query Frame = 2
Query:   11 YREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEHRK 175
            Y++IVP LRLAGPTS+APV+E A+ IVE+SGGQYHVLV+IADGQVTRSV+T  ++
Sbjct:  829 YKKIVPNLRLAGPTSYAPVVEAAIDIVEKSGGQYHVLVLIADGQVTRSVNTSEKE 993

HSP 2 
Score: 76.2135 bits (160), Expect = 6.06658e-15
Identity = 36/52 (69.23%), Postives = 40/52 (76.92%), Query Frame = -1
Query:    7 VSTLLVTCPSAIITNT*YWPPLCSTMVMAISITGANEVGPASRNFGTISL*R 162
            V TLLVT PSA+ T+T YWPPL STM +A S TGA EVGPASR  GTI L*+
Sbjct:  842 VLTLLVTWPSAMRTSTWYWPPLFSTMSIAASTTGA*EVGPASRKLGTIFL*Q 997

CC454_contig46567_v21.16003e-2069.81%
CC454_contig46567_v2
HSP 1 
Score: 91.3344 bits (193), Expect = 1.16003e-20
Identity = 37/53 (69.81%), Postives = 46/53 (86.79%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVD 160
            L RYREIVP+L+L+GPTSFAP+I+ A+ IVE++ GQYHVLVIIADGQ+  S D
Sbjct:  651 LARYREIVPRLKLSGPTSFAPIIDAAIDIVEKNNGQYHVLVIIADGQLPSSSD 809

HSP 2 
Score: 23.0613 bits (44), Expect = 1.16003e-20
Identity = 10/15 (66.67%), Postives = 11/15 (73.33%), Query Frame = 3
Query:  165 SIGKLSPQEQKTGRS 209
            S G+LSPQEQ T  S
Sbjct:  603 SPGRLSPQEQATVNS 647

HSP 3 
Score: 65.2165 bits (136), Expect = 4.46632e-13
Identity = 33/52 (63.46%), Postives = 37/52 (71.15%), Query Frame = -1
Query:    7 VSTLLVTCPSAIITNT*YWPPLCSTMVMAISITGANEVGPASRNFGTISL*R 162
            +S L  +CPSAI+T T*Y P   STM +A SI GANEVGP S   GTISL*R
Sbjct:  649 LSELEGSCPSAIMTRT*YCPLFFSTMSIAASIIGANEVGPDSFKRGTISL*R 804

HSP 4 
Score: 23.5196 bits (45), Expect = 4.46632e-13
Identity = 8/10 (80.00%), Postives = 8/10 (80.00%), Query Frame = -3
Query:  170 VFCSCGLSFP 199
            V CSCGLS P
Sbjct:  613 VACSCGLSLP 642

CC454_contig35966_v27.11151e-1395.83%
CC454_contig35966_v2
HSP 1 
Score: 69.3404 bits (145), Expect = 7.11151e-13
Identity = 23/24 (95.83%), Postives = 23/24 (95.83%), Query Frame = 1
Query:   73 DGHDHRGAEWGPISCVSNNCRWTG 144
            DGHDHRGAEWGPISCVSNNCRW G
Sbjct:    1 DGHDHRGAEWGPISCVSNNCRWXG 72

HSP 2 
Score: 63.3837 bits (132), Expect = 4.41683e-11
Identity = 24/29 (82.76%), Postives = 25/29 (86.21%), Query Frame = -3
Query:   74 INTSCYLSICNYY*HMILAPTLLHDGHGH 160
            I  + YL ICNYY*HMILAPTLLHDGHGH
Sbjct:    2 IQDAKYLXICNYY*HMILAPTLLHDGHGH 88

HSP 3 
Score: 62.4673 bits (130), Expect = 8.33642e-11
Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = -1
Query:   73 TCPSAIITNT*YWPPLCSTMVMAI 144
            TCPSAIITNT*YWPPLCSTMVMAI
Sbjct:    1 TCPSAIITNT*YWPPLCSTMVMAI 72

Blast Hits to Contigs V2 CCall

Analysis Date: 11-03-2009 (Blast: AC454_contigs_v2_vs_CCall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
CCall_contig40237_v22.42593e-2790.91%
CCall_contig40237_v2
HSP 1 
Score: 117.452 bits (250), Expect = 2.42593e-27
Identity = 50/55 (90.91%), Postives = 53/55 (96.36%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTE 166
            L RYRE+VP LRLAGPTSFAPVIEMA+TIVEQSGGQYHVL+IIADGQVTRSVDTE
Sbjct:  972 LARYRELVPVLRLAGPTSFAPVIEMAITIVEQSGGQYHVLLIIADGQVTRSVDTE 1136

HSP 2 
Score: 107.372 bits (228), Expect = 2.62687e-24
Identity = 46/55 (83.64%), Postives = 49/55 (89.09%), Query Frame = -1
Query:    1 SVSTLLVTCPSAIITNT*YWPPLCSTMVMAISITGANEVGPASRNFGTISL*RLN 165
            SVSTLLVTCPSAII NT*YWPPLCST+VMAIS+TGAN+VGPASR  GT SL R N
Sbjct:  973 SVSTLLVTCPSAIINNT*YWPPLCSTIVMAISMTGANDVGPASRRTGTNSLYRAN 1137

HSP 3 
Score: 78.0464 bits (164), Expect = 1.76704e-15
Identity = 26/43 (60.47%), Postives = 35/43 (81.40%), Query Frame = 1
Query:   34 TTCRTNFVCTCN*DGHDHRGAEWGPISCVSNNCRWTGNKKC*Y 162
            TTCR N +C+C+*+GH +  A+W P+SCV +NC WTG+KKC*Y
Sbjct:  976 TTCRANIICSCH*NGHHYC*AKWWPVSCVIDNC*WTGDKKC*Y 1104

HSP 4 
Score: 70.715 bits (148), Expect = 2.84576e-13
Identity = 32/55 (58.18%), Postives = 37/55 (67.27%), Query Frame = -3
Query:    2 LSINTSCYLSICNYY*HMILAPTLLHDGHGHLNYRCKRSWSCKS*FWXYFPVAPQ 166
            L INTSC+LSI NY *HMILA TLL++  GH N R K  W CKS*    F ++ Q
Sbjct:  972 LXINTSCHLSISNYQ*HMILATTLLNNSDGHFNDRSK*CWPCKS*NRDQFSISCQ 1136

CCall_contig44743_v21.24778e-2683.64%
CCall_contig44743_v2
HSP 1 
Score: 110.121 bits (234), Expect = 1.24778e-26
Identity = 46/55 (83.64%), Postives = 51/55 (92.73%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTE 166
            L +Y+EIVP LRLAGPTSFAP+IEMA+T VEQS GQYHVLVIIADGQVTRSVDT+
Sbjct: 1542 LLQYKEIVPNLRLAGPTSFAPIIEMAITTVEQSSGQYHVLVIIADGQVTRSVDTQ 1706

HSP 2 
Score: 24.436 bits (47), Expect = 1.24778e-26
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  171 GKLSPQEQKT 200
            G+LSPQEQKT
Sbjct: 1509 GQLSPQEQKT 1538

HSP 3 
Score: 95.4583 bits (202), Expect = 3.20611e-23
Identity = 41/50 (82.00%), Postives = 43/50 (86.00%), Query Frame = -1
Query:   13 VSTLLVTCPSAIITNT*YWPPLCSTMVMAISITGANEVGPASRNFGTISL 162
            VSTLLVTCPSAIIT T YWP LCST+VMAISI GA +VGPASR  GTISL
Sbjct: 1546 VSTLLVTCPSAIITKTWYWPLLCSTVVMAISIIGAKDVGPASRRLGTISL 1695

HSP 4 
Score: 27.6434 bits (54), Expect = 3.20611e-23
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = -3
Query:  170 VFCSCGLSFP 199
            VFCSCGLS+P
Sbjct: 1510 VFCSCGLSWP 1539

HSP 5 
Score: 65.6747 bits (137), Expect = 9.36437e-12
Identity = 27/44 (61.36%), Postives = 32/44 (72.73%), Query Frame = -3
Query:   35 LSINTSCYLSICNYY*HMILAPTLLHDGHGHLNYRCKRSWSCKS 166
            LSINTSCYL I NY+ +M+LA TLL   +GHLN   KR W C+S
Sbjct: 1542 LSINTSCYLPISNYHQNMVLATTLLDSCNGHLNNWSKRCWPCES 1673

CCall_contig20337_v23.00422e-2272.73%
CCall_contig20337_v2
HSP 1 
Score: 100.499 bits (213), Expect = 3.00422e-22
Identity = 40/55 (72.73%), Postives = 50/55 (90.91%), Query Frame = 2
Query:   11 YREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEHRK 175
            Y++IVP LRLAGPTS+APV+E A+ IVE+SGGQYHVLV+IADGQVTRSV+T  ++
Sbjct:  829 YKKIVPNLRLAGPTSYAPVVEAAIDIVEKSGGQYHVLVLIADGQVTRSVNTSEKE 993

HSP 2 
Score: 76.2135 bits (160), Expect = 6.29484e-15
Identity = 36/52 (69.23%), Postives = 40/52 (76.92%), Query Frame = -1
Query:    7 VSTLLVTCPSAIITNT*YWPPLCSTMVMAISITGANEVGPASRNFGTISL*R 162
            V TLLVT PSA+ T+T YWPPL STM +A S TGA EVGPASR  GTI L*+
Sbjct:  842 VLTLLVTWPSAMRTSTWYWPPLFSTMSIAASTTGA*EVGPASRKLGTIFL*Q 997

CCall_contig5607_v21.20245e-2069.81%
CCall_contig5607_v2
HSP 1 
Score: 91.3344 bits (193), Expect = 1.20245e-20
Identity = 37/53 (69.81%), Postives = 46/53 (86.79%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVD 160
            L RYREIVP+L+L+GPTSFAP+I+ A+ IVE++ GQYHVLVIIADGQ+  S D
Sbjct:  651 LARYREIVPRLKLSGPTSFAPIIDAAIDIVEKNNGQYHVLVIIADGQLPSSSD 809

HSP 2 
Score: 23.0613 bits (44), Expect = 1.20245e-20
Identity = 10/15 (66.67%), Postives = 11/15 (73.33%), Query Frame = 3
Query:  165 SIGKLSPQEQKTGRS 209
            S G+LSPQEQ T  S
Sbjct:  603 SPGRLSPQEQATVNS 647

HSP 3 
Score: 65.2165 bits (136), Expect = 4.62767e-13
Identity = 33/52 (63.46%), Postives = 37/52 (71.15%), Query Frame = -1
Query:    7 VSTLLVTCPSAIITNT*YWPPLCSTMVMAISITGANEVGPASRNFGTISL*R 162
            +S L  +CPSAI+T T*Y P   STM +A SI GANEVGP S   GTISL*R
Sbjct:  649 LSELEGSCPSAIMTRT*YCPLFFSTMSIAASIIGANEVGPDSFKRGTISL*R 804

HSP 4 
Score: 23.5196 bits (45), Expect = 4.62767e-13
Identity = 8/10 (80.00%), Postives = 8/10 (80.00%), Query Frame = -3
Query:  170 VFCSCGLSFP 199
            V CSCGLS P
Sbjct:  613 VACSCGLSLP 642

CCall_contig35579_v27.37909e-1395.83%
CCall_contig35579_v2
HSP 1 
Score: 69.3404 bits (145), Expect = 7.37909e-13
Identity = 23/24 (95.83%), Postives = 23/24 (95.83%), Query Frame = 1
Query:   73 DGHDHRGAEWGPISCVSNNCRWTG 144
            DGHDHRGAEWGPISCVSNNCRW G
Sbjct:    1 DGHDHRGAEWGPISCVSNNCRWXG 72

HSP 2 
Score: 63.3837 bits (132), Expect = 4.58301e-11
Identity = 24/29 (82.76%), Postives = 25/29 (86.21%), Query Frame = -3
Query:   74 INTSCYLSICNYY*HMILAPTLLHDGHGH 160
            I  + YL ICNYY*HMILAPTLLHDGHGH
Sbjct:    2 IQDAKYLXICNYY*HMILAPTLLHDGHGH 88

HSP 3 
Score: 62.4673 bits (130), Expect = 8.65008e-11
Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = -1
Query:   73 TCPSAIITNT*YWPPLCSTMVMAI 144
            TCPSAIITNT*YWPPLCSTMVMAI
Sbjct:    1 TCPSAIITNT*YWPPLCSTMVMAI 72

Blast Hits to MedicagoProt

Analysis Date: 11-03-2009 (Blast: AC454_contigs_v2_vs_MedicagoProt_20080227)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
IMGA|CT573420_15.4 Zinc finger, RING-type; von Willebrand factor, type A; Copine chr03_p3.87139e-2385.71%
eudomolecule_IMGAG_V2 24733234-24729191 F EGN_Mt071002 20080227
HSP 1 
Score: 100.908 bits (250), Expect = 3.87139e-23
Identity = 48/56 (85.71%), Postives = 54/56 (96.43%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEH 169
            L RYREIVP+L+LAGPTSFAP+IEMAMTIVEQS GQYHVL+IIADGQVTRS+DTE+
Sbjct:  211 LARYREIVPQLKLAGPTSFAPIIEMAMTIVEQSAGQYHVLLIIADGQVTRSIDTEY 266

HSP 2 
Score: 22.3274 bits (46), Expect = 3.87139e-23
Identity = 9/10 (90.00%), Postives = 9/10 (90.00%), Query Frame = 3
Query:  171 GKLSPQEQKT 200
            G LSPQEQKT
Sbjct:  267 GNLSPQEQKT 276

IMGA|CT009521_4.4 Zinc finger, RING-type; von Willebrand factor, type A; Copine chr03_p3.12662e-1870.69%
eudomolecule_IMGAG_V2 35309917-35314462 F EGN_Mt071002 20080227
HSP 1 
Score: 84.7297 bits (208), Expect = 3.12662e-18
Identity = 41/58 (70.69%), Postives = 49/58 (84.48%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEHRK 175
            L RYR+IVP L+L+GPTSFAPVI+ A+ IVE++ GQYHVLVIIADGQVTR+  T H K
Sbjct:  188 LARYRQIVPHLKLSGPTSFAPVIDAAIDIVERNNGQYHVLVIIADGQVTRNPGTPHGK 245

HSP 2 
Score: 21.9422 bits (45), Expect = 3.12662e-18
Identity = 9/10 (90.00%), Postives = 9/10 (90.00%), Query Frame = 3
Query:  171 GKLSPQEQKT 200
            GKLSPQEQ T
Sbjct:  244 GKLSPQEQAT 253

IMGA|AC167958_23.4 Zinc finger, RING-type; von Willebrand factor, type A; Copine chr06_p2.20289e-1673.08%
eudomolecule_IMGAG_V2 17732352-17727991 E EGN_Mt071002 20080227
HSP 1 
Score: 80.1073 bits (196), Expect = 2.20289e-16
Identity = 38/52 (73.08%), Postives = 46/52 (88.46%), Query Frame = 2
Query:   11 YREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTE 166
            Y+ IVP L+L+GPTS+APVIE A+ IVE+S GQ+HVLVIIADGQVT+SVD E
Sbjct:  160 YKNIVPNLKLSGPTSYAPVIEAAIDIVEKSHGQFHVLVIIADGQVTKSVDNE 211

IMGA|AC202353_15.4 Zinc finger, RING-type; von Willebrand factor, type A; Copine chr06_p2.20289e-1673.08%
eudomolecule_IMGAG_V2 17555631-17558693 E EGN_Mt071002 20080227
HSP 1 
Score: 80.1073 bits (196), Expect = 2.20289e-16
Identity = 38/52 (73.08%), Postives = 46/52 (88.46%), Query Frame = 2
Query:   11 YREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTE 166
            Y+ IVP L+L+GPTS+APVIE A+ IVE+S GQ+HVLVIIADGQVT+SVD E
Sbjct:  116 YKNIVPNLKLSGPTSYAPVIEAAIDIVEKSHGQFHVLVIIADGQVTKSVDNE 167

IMGA|AC167958_18.4 von Willebrand factor, type A; Copine chr06_p4.90753e-1674.00%
eudomolecule_IMGAG_V2 17645363-17641979 E EGN_Mt071002 20080227
HSP 1 
Score: 78.9518 bits (193), Expect = 4.90753e-16
Identity = 37/50 (74.00%), Postives = 45/50 (90.00%), Query Frame = 2
Query:   11 YREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVD 160
            Y+ +VP L+L+GPTS+APVIE A+ IVE+S GQ+HVLVIIADGQVTRSVD
Sbjct:  118 YKNVVPNLKLSGPTSYAPVIEAAIDIVEKSHGQFHVLVIIADGQVTRSVD 167

IMGA|AC149129_52.4 Copine chr07_p7.83499e-1455.71%
eudomolecule_IMGAG_V2 19111947-19111064 E EGN_Mt071002 20080227
HSP 1 
Score: 71.633 bits (174), Expect = 7.83499e-14
Identity = 39/70 (55.71%), Postives = 50/70 (71.43%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQY-HVLVIIADGQVTRS----VDTEHRKAKSARAE 196
            L RYREIVP +RLAGP SFA +++ A  IVE+SGGQY HVL+I+A+GQVTR+    +  + RK   A  E
Sbjct:   71 LSRYREIVPNIRLAGPRSFAHIVKTATAIVERSGGQYHHVLMILANGQVTRTRHGRLSPQERKTMDAIVE 140

Blast Hits to Contig V2 Oall

Analysis Date: 11-03-2009 (Blast: AC454_contigs_v2_vs_Oall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
Oall_contig5066_v21.0137e-2683.64%
Oall_contig5066_v2
HSP 1 
Score: 110.121 bits (234), Expect = 1.0137e-26
Identity = 46/55 (83.64%), Postives = 51/55 (92.73%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTE 166
            L +Y+EIVP LRLAGPTSFAP+IEMA+T VEQS GQYHVLVIIADGQVTRSVDT+
Sbjct:  736 LMQYKEIVPNLRLAGPTSFAPIIEMAITTVEQSXGQYHVLVIIADGQVTRSVDTQ 900

HSP 2 
Score: 24.436 bits (47), Expect = 1.0137e-26
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  171 GKLSPQEQKT 200
            G+LSPQEQKT
Sbjct:  703 GQLSPQEQKT 732

HSP 3 
Score: 96.3747 bits (204), Expect = 1.39439e-23
Identity = 41/50 (82.00%), Postives = 43/50 (86.00%), Query Frame = -1
Query:   13 VSTLLVTCPSAIITNT*YWPPLCSTMVMAISITGANEVGPASRNFGTISL 162
            VSTLLVTCPSAIIT T YWP LCST+VMAISI GA +VGPASR  GTISL
Sbjct:  740 VSTLLVTCPSAIITKTWYWPXLCSTVVMAISIIGAKDVGPASRRLGTISL 889

HSP 4 
Score: 27.6434 bits (54), Expect = 1.39439e-23
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = -3
Query:  170 VFCSCGLSFP 199
            VFCSCGLS+P
Sbjct:  704 VFCSCGLSWP 733

HSP 5 
Score: 66.5912 bits (139), Expect = 3.97563e-12
Identity = 27/44 (61.36%), Postives = 33/44 (75.00%), Query Frame = -3
Query:   35 LSINTSCYLSICNYY*HMILAPTLLHDGHGHLNYRCKRSWSCKS 166
            LSINTSCYL I NY+ +M+LA TLL+  +GHLN   KR W C+S
Sbjct:  736 LSINTSCYLPISNYHQNMVLAXTLLNSCNGHLNNWSKRCWPCES 867

Oall_contig1172_v21.79563e-2689.09%
Oall_contig1172_v2
HSP 1 
Score: 114.245 bits (243), Expect = 1.79563e-26
Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTE 166
            L RYRE+VP LRLAGPTSFAPVIEMA+TIVEQS GQYHVL+IIADGQVTRSVDTE
Sbjct:  965 LARYRELVPVLRLAGPTSFAPVIEMAITIVEQSXGQYHVLLIIADGQVTRSVDTE 1129

HSP 2 
Score: 103.706 bits (220), Expect = 2.67123e-23
Identity = 45/55 (81.82%), Postives = 48/55 (87.27%), Query Frame = -1
Query:    1 SVSTLLVTCPSAIITNT*YWPPLCSTMVMAISITGANEVGPASRNFGTISL*RLN 165
            SVSTLLVTCPSAII NT*YWP LCST+VMAIS+TGAN+VGPASR  GT SL R N
Sbjct:  966 SVSTLLVTCPSAIINNT*YWPXLCSTIVMAISMTGANDVGPASRRTGTNSLYRAN 1130

HSP 3 
Score: 72.5479 bits (152), Expect = 6.40114e-14
Identity = 25/43 (58.14%), Postives = 34/43 (79.07%), Query Frame = 1
Query:   34 TTCRTNFVCTCN*DGHDHRGAEWGPISCVSNNCRWTGNKKC*Y 162
            TTCR N +C+C+*+GH +  A+  P+SCV +NC WTG+KKC*Y
Sbjct:  969 TTCRANIICSCH*NGHHYC*AKXWPVSCVIDNC*WTGDKKC*Y 1097

HSP 4 
Score: 71.1732 bits (149), Expect = 1.65982e-13
Identity = 32/55 (58.18%), Postives = 37/55 (67.27%), Query Frame = -3
Query:    2 LSINTSCYLSICNYY*HMILAPTLLHDGHGHLNYRCKRSWSCKS*FWXYFPVAPQ 166
            L INTSC+LSI NY *HMILA TLL++  GH N R K  W CKS*    F ++ Q
Sbjct:  965 LGINTSCHLSISNYQ*HMILAXTLLNNSDGHFNDRSK*CWPCKS*NRDQFSISCQ 1129

Oall_contig3893_v23.58245e-2379.63%
Oall_contig3893_v2
HSP 1 
Score: 103.248 bits (219), Expect = 3.58245e-23
Identity = 43/54 (79.63%), Postives = 49/54 (90.74%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDT 163
            L RYREIVPK+ LAGPTSFAP+IE A+ IV+ SGGQYHVL+IIADGQVTRSV+T
Sbjct:   40 LSRYREIVPKVHLAGPTSFAPIIETAIGIVDNSGGQYHVLMIIADGQVTRSVNT 201

HSP 2 
Score: 74.3807 bits (156), Expect = 1.79688e-14
Identity = 34/52 (65.38%), Postives = 40/52 (76.92%), Query Frame = -1
Query:    7 VSTLLVTCPSAIITNT*YWPPLCSTMVMAISITGANEVGPASRNFGTISL*R 162
            V TLLVTCPSA+I  T*Y PPL ST+ +A+S+ GA +VGPA   FGTIS *R
Sbjct:   41 VFTLLVTCPSAMIIRT*Y*PPLLSTIPIAVSMIGAKDVGPARCTFGTISR*R 196

Oall_contig35121_v22.05528e-2070.37%
Oall_contig35121_v2
HSP 1 
Score: 94.0837 bits (199), Expect = 2.05528e-20
Identity = 38/54 (70.37%), Postives = 48/54 (88.89%), Query Frame = 2
Query:   14 REIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEHRK 175
            ++IVP LRLAGPTS+APV+E A+ IVE+SGG YHVLV+IADGQVTRSV+T  ++
Sbjct:  675 QKIVPNLRLAGPTSYAPVVEAAIDIVEKSGGXYHVLVLIADGQVTRSVNTSEKE 836

HSP 2 
Score: 68.8822 bits (144), Expect = 8.12332e-13
Identity = 33/48 (68.75%), Postives = 36/48 (75.00%), Query Frame = -1
Query:   19 VSTLLVTCPSAIITNT*YWPPLCSTMVMAISITGANEVGPASRNFGTI 162
            V TLLVT PSA+ T+T Y PPL STM +A S TGA EVGPASR  GTI
Sbjct:  680 VLTLLVTWPSAMRTSTWYXPPLFSTMSIAASTTGA*EVGPASRKLGTI 823

Blast Hits to Populus Trichocarpa Proteins

Analysis Date: 11-03-2009 (Blast: AC454_contigs_v2_vs_PopulusProt_JamboreeModels1_1)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
gw1.I.2678.14.10855e-2491.07%
jgi|Poptr1_1|174078|gw1.I.2678.1
HSP 1 
Score: 104.375 bits (259), Expect = 4.10855e-24
Identity = 51/56 (91.07%), Postives = 53/56 (94.64%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEH 169
            L RYREIVP LRLAGPTSFAP+IEMAMTIVEQS GQYHVL+IIADGQVTRSVDTEH
Sbjct:  119 LSRYREIVPNLRLAGPTSFAPIIEMAMTIVEQSAGQYHVLLIIADGQVTRSVDTEH 174

HSP 2 
Score: 22.7126 bits (47), Expect = 4.10855e-24
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  171 GKLSPQEQKT 200
            G+LSPQEQKT
Sbjct:  175 GQLSPQEQKT 184

grail3.00150203015.3336e-2492.86%
jgi|Poptr1_1|662072|grail3.0015020301
HSP 1 
Score: 105.916 bits (263), Expect = 5.3336e-24
Identity = 52/56 (92.86%), Postives = 55/56 (98.21%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEH 169
            LRRYRE+VP LRLAGPTSFAPVIEMA+TIVEQSGGQYHVL+IIADGQVTRSVDTEH
Sbjct:  185 LRRYRELVPCLRLAGPTSFAPVIEMAITIVEQSGGQYHVLLIIADGQVTRSVDTEH 240

gw1.VIII.369.11.71576e-2287.50%
jgi|Poptr1_1|418941|gw1.VIII.369.1
HSP 1 
Score: 100.908 bits (250), Expect = 1.71576e-22
Identity = 49/56 (87.50%), Postives = 52/56 (92.86%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEH 169
            L RY+EIVP LRLAGPTSFAPVIEMA+TIVEQ GGQYHVL+IIADGQVTRSVDT H
Sbjct:  180 LTRYKEIVPNLRLAGPTSFAPVIEMAITIVEQGGGQYHVLLIIADGQVTRSVDTHH 235

fgenesh4_pg.C_LG_X0005548.51524e-2287.27%
jgi|Poptr1_1|769064|fgenesh4_pg.C_LG_X000554
HSP 1 
Score: 98.5969 bits (244), Expect = 8.51524e-22
Identity = 48/55 (87.27%), Postives = 53/55 (96.36%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTE 166
            L +Y+EIVP LRLAGPTSFAPVIEMA+TIVEQSGGQYHVL+IIADGQVTRSVDT+
Sbjct:  140 LMQYKEIVPNLRLAGPTSFAPVIEMAITIVEQSGGQYHVLLIIADGQVTRSVDTQ 194

grail3.00050179018.51524e-2285.45%
jgi|Poptr1_1|666549|grail3.0005017901
HSP 1 
Score: 98.5969 bits (244), Expect = 8.51524e-22
Identity = 47/55 (85.45%), Postives = 53/55 (96.36%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTE 166
            L +YRE+ P+LRLAGPTSFAP+IEMA+TIVEQSGGQYHVL+IIADGQVTRSVDTE
Sbjct:  176 LTQYRELAPQLRLAGPTSFAPIIEMAITIVEQSGGQYHVLLIIADGQVTRSVDTE 230

gw1.V.2535.12.56387e-1875.93%
jgi|Poptr1_1|207134|gw1.V.2535.1
HSP 1 
Score: 87.0409 bits (214), Expect = 2.56387e-18
Identity = 41/54 (75.93%), Postives = 48/54 (88.89%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDT 163
            L RYREIVP L+L+GPTSFAP+I+ A+ IVE+SGGQYHVLV+IADGQVTR  DT
Sbjct:  112 LTRYREIVPHLKLSGPTSFAPIIDAAIDIVEKSGGQYHVLVVIADGQVTRGPDT 165

gw1.VI.1555.17.79514e-1875.93%
jgi|Poptr1_1|417182|gw1.VI.1555.1
HSP 1 
Score: 85.1149 bits (209), Expect = 7.79514e-18
Identity = 41/54 (75.93%), Postives = 47/54 (87.04%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDT 163
            L RYREIVP++ LAGPTSFAP+IE A+ IV+ SGGQYHVL+IIADGQVT SV T
Sbjct:  120 LSRYREIVPRVNLAGPTSFAPIIETAIEIVDNSGGQYHVLLIIADGQVTSSVGT 173

HSP 2 
Score: 20.7866 bits (42), Expect = 7.79514e-18
Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 3
Query:  171 GKLSPQEQKT 200
            G+LSPQEQ T
Sbjct:  176 GQLSPQEQNT 185

gw1.X.1323.11.27243e-1778.43%
jgi|Poptr1_1|226626|gw1.X.1323.1
HSP 1 
Score: 84.7297 bits (208), Expect = 1.27243e-17
Identity = 40/51 (78.43%), Postives = 47/51 (92.16%), Query Frame = 2
Query:   11 YREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDT 163
            Y++IVP LRL+GPTS+ PVIE A+ IVE+SGGQYHVL+IIADGQVTRSVDT
Sbjct:  128 YKKIVPNLRLSGPTSYGPVIEAAIDIVEKSGGQYHVLLIIADGQVTRSVDT 178

gw1.VIII.2087.11.19096e-1567.27%
jgi|Poptr1_1|420659|gw1.VIII.2087.1
HSP 1 
Score: 78.1814 bits (191), Expect = 1.19096e-15
Identity = 37/55 (67.27%), Postives = 47/55 (85.45%), Query Frame = 2
Query:   11 YREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEHRK 175
            Y++IVP LRLAGPTS+ PVIE A+ IV++S GQYHVL+IIADGQVTRS ++  R+
Sbjct:  107 YKKIVPNLRLAGPTSYGPVIEAAIDIVQKSKGQYHVLIIIADGQVTRSDNSSDRE 161

gw1.VII.1520.11.47358e-1574.07%
jgi|Poptr1_1|217215|gw1.VII.1520.1
HSP 1 
Score: 77.0258 bits (188), Expect = 1.47358e-15
Identity = 40/54 (74.07%), Postives = 46/54 (85.19%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDT 163
            L RYREIVP L+L+GPTSFA +I  A+ IVE+S GQYHVLVIIADGQVTR+ DT
Sbjct:  123 LARYREIVPHLKLSGPTSFAAIINAAIDIVEKS-GQYHVLVIIADGQVTRTPDT 175

HSP 2 
Score: 21.1718 bits (43), Expect = 1.47358e-15
Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 3
Query:  171 GKLSPQEQKTGRS 209
            G+LSPQEQ T  S
Sbjct:  178 GRLSPQEQATVNS 190

Blast Hits to Contig V2 RO454

Analysis Date: 11-03-2009 (Blast: AC454_contigs_v2_vs_RO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
RO454_contig27852_v26.22003e-2783.64%
RO454_contig27852_v2
HSP 1 
Score: 110.121 bits (234), Expect = 6.22003e-27
Identity = 46/55 (83.64%), Postives = 51/55 (92.73%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTE 166
            L +Y+EIVP LRLAGPTSFAP+IEMA+T VEQS GQYHVLVIIADGQVTRSVDT+
Sbjct:  211 LMQYKEIVPNLRLAGPTSFAPIIEMAITTVEQSXGQYHVLVIIADGQVTRSVDTQ 375

HSP 2 
Score: 24.436 bits (47), Expect = 6.22003e-27
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  171 GKLSPQEQKT 200
            G+LSPQEQKT
Sbjct:  178 GQLSPQEQKT 207

HSP 3 
Score: 96.3747 bits (204), Expect = 8.54869e-24
Identity = 41/50 (82.00%), Postives = 43/50 (86.00%), Query Frame = -1
Query:   13 VSTLLVTCPSAIITNT*YWPPLCSTMVMAISITGANEVGPASRNFGTISL 162
            VSTLLVTCPSAIIT T YWP LCST+VMAISI GA +VGPASR  GTISL
Sbjct:  215 VSTLLVTCPSAIITKTWYWPXLCSTVVMAISIIGAKDVGPASRRLGTISL 364

HSP 4 
Score: 27.6434 bits (54), Expect = 8.54869e-24
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = -3
Query:  170 VFCSCGLSFP 199
            VFCSCGLS+P
Sbjct:  179 VFCSCGLSWP 208

HSP 5 
Score: 66.5912 bits (139), Expect = 2.44477e-12
Identity = 27/44 (61.36%), Postives = 33/44 (75.00%), Query Frame = -3
Query:   35 LSINTSCYLSICNYY*HMILAPTLLHDGHGHLNYRCKRSWSCKS 166
            LSINTSCYL I NY+ +M+LA TLL+  +GHLN   KR W C+S
Sbjct:  211 LSINTSCYLPISNYHQNMVLAXTLLNSCNGHLNNWSKRCWPCES 342

RO454_contig7418_v22.08409e-2689.09%
RO454_contig7418_v2
HSP 1 
Score: 113.328 bits (241), Expect = 2.08409e-26
Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTE 166
            L RYRE+VP LRLAGPTSFAPVIEMA+TIVEQS GQYHVL+IIADGQVTRSVDTE
Sbjct:  829 LARYRELVPVLRLAGPTSFAPVIEMAITIVEQSVGQYHVLLIIADGQVTRSVDTE 993

HSP 2 
Score: 103.706 bits (220), Expect = 1.64264e-23
Identity = 45/55 (81.82%), Postives = 48/55 (87.27%), Query Frame = -1
Query:    1 SVSTLLVTCPSAIITNT*YWPPLCSTMVMAISITGANEVGPASRNFGTISL*RLN 165
            SVSTLLVTCPSAII NT*YWP LCST+VMAIS+TGAN+VGPASR  GT SL R N
Sbjct:  830 SVSTLLVTCPSAIINNT*YWPTLCSTIVMAISMTGANDVGPASRRTGTNSLYRAN 994

HSP 3 
Score: 69.7986 bits (146), Expect = 2.64665e-13
Identity = 24/42 (57.14%), Postives = 33/42 (78.57%), Query Frame = 1
Query:   37 TCRTNFVCTCN*DGHDHRGAEWGPISCVSNNCRWTGNKKC*Y 162
            TCR N +C+C+*+GH +  A+  P+SCV +NC WTG+KKC*Y
Sbjct:  833 TCRANIICSCH*NGHHYC*AKCWPVSCVIDNC*WTGDKKC*Y 958

HSP 4 
Score: 68.8822 bits (144), Expect = 4.99534e-13
Identity = 29/44 (65.91%), Postives = 32/44 (72.73%), Query Frame = -3
Query:   35 LSINTSCYLSICNYY*HMILAPTLLHDGHGHLNYRCKRSWSCKS 166
            L INTSC+LSI NY *HMILA TLL++  GH N R K  W CKS
Sbjct:  829 LGINTSCHLSISNYQ*HMILANTLLNNSDGHFNDRSK*CWPCKS 960

RO454_contig2437_v22.20423e-2379.63%
RO454_contig2437_v2
HSP 1 
Score: 103.248 bits (219), Expect = 2.20423e-23
Identity = 43/54 (79.63%), Postives = 49/54 (90.74%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDT 163
            L RYREIVPK+ LAGPTSFAP+IE A+ IV+ SGGQYHVL+IIADGQVTRSV+T
Sbjct:   40 LSRYREIVPKVHLAGPTSFAPIIETAIGIVDNSGGQYHVLMIIADGQVTRSVNT 201

HSP 2 
Score: 74.3807 bits (156), Expect = 1.10497e-14
Identity = 34/52 (65.38%), Postives = 40/52 (76.92%), Query Frame = -1
Query:    7 VSTLLVTCPSAIITNT*YWPPLCSTMVMAISITGANEVGPASRNFGTISL*R 162
            V TLLVTCPSA+I  T*Y PPL ST+ +A+S+ GA +VGPA   FGTIS *R
Sbjct:   41 VFTLLVTCPSAMIIRT*Y*PPLLSTIPIAVSMIGAKDVGPARCTFGTISR*R 196

Blast Hits to TAIR7 Peptides

Analysis Date: 11-03-2009 (Blast: AC454_contigs_v2_vs_TAIR7_pep_20070425)
Best 10 Hits Shown | Show Best 25 Hits
Note: Click a description for more details.
Match Name E value Identity
AT3G01650.1 2.7185e-2489.29%
copine-related | chr3:242741-245069 FORWARD
HSP 1 
Score: 104.375 bits (259), Expect = 2.7185e-24
Identity = 50/56 (89.29%), Postives = 54/56 (96.43%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEH 169
            L RYREIVP+L+LAGPTSFAP+IEMAMT+VEQS GQYHVLVIIADGQVTRSVDTEH
Sbjct:  242 LARYREIVPQLKLAGPTSFAPIIEMAMTVVEQSSGQYHVLVIIADGQVTRSVDTEH 297

HSP 2 
Score: 23.0978 bits (48), Expect = 2.7185e-24
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  171 GKLSPQEQKT 200
            G+LSPQEQKT
Sbjct:  298 GRLSPQEQKT 307

AT5G14420.2 1.71723e-2387.50%
copine-related | chr5:4648358-4650566 REVERSE
HSP 1 
Score: 102.064 bits (253), Expect = 1.71723e-23
Identity = 49/56 (87.50%), Postives = 55/56 (98.21%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEH 169
            L RY+EIVP+L+LAGPTSFAP+I+MAMTIVEQSGGQYHVLVIIADGQVTRSVDTE+
Sbjct:  208 LSRYKEIVPQLKLAGPTSFAPIIDMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEN 263

HSP 2 
Score: 22.7126 bits (47), Expect = 1.71723e-23
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  171 GKLSPQEQKT 200
            G+LSPQEQKT
Sbjct:  264 GQLSPQEQKT 273

AT5G14420.4 1.71723e-2387.50%
copine-related | chr5:4648358-4650566 REVERSE
HSP 1 
Score: 102.064 bits (253), Expect = 1.71723e-23
Identity = 49/56 (87.50%), Postives = 55/56 (98.21%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEH 169
            L RY+EIVP+L+LAGPTSFAP+I+MAMTIVEQSGGQYHVLVIIADGQVTRSVDTE+
Sbjct:  208 LSRYKEIVPQLKLAGPTSFAPIIDMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEN 263

HSP 2 
Score: 22.7126 bits (47), Expect = 1.71723e-23
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  171 GKLSPQEQKT 200
            G+LSPQEQKT
Sbjct:  264 GQLSPQEQKT 273

AT5G14420.3 1.71723e-2387.50%
copine-related | chr5:4648358-4650566 REVERSE
HSP 1 
Score: 102.064 bits (253), Expect = 1.71723e-23
Identity = 49/56 (87.50%), Postives = 55/56 (98.21%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEH 169
            L RY+EIVP+L+LAGPTSFAP+I+MAMTIVEQSGGQYHVLVIIADGQVTRSVDTE+
Sbjct:  208 LSRYKEIVPQLKLAGPTSFAPIIDMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEN 263

HSP 2 
Score: 22.7126 bits (47), Expect = 1.71723e-23
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  171 GKLSPQEQKT 200
            G+LSPQEQKT
Sbjct:  264 GQLSPQEQKT 273

AT5G14420.1 1.71723e-2387.50%
copine-related | chr5:4648358-4650566 REVERSE
HSP 1 
Score: 102.064 bits (253), Expect = 1.71723e-23
Identity = 49/56 (87.50%), Postives = 55/56 (98.21%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEH 169
            L RY+EIVP+L+LAGPTSFAP+I+MAMTIVEQSGGQYHVLVIIADGQVTRSVDTE+
Sbjct:  208 LSRYKEIVPQLKLAGPTSFAPIIDMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEN 263

HSP 2 
Score: 22.7126 bits (47), Expect = 1.71723e-23
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  171 GKLSPQEQKT 200
            G+LSPQEQKT
Sbjct:  264 GQLSPQEQKT 273

AT1G67800.4 6.25265e-2184.91%
protein binding / zinc ion binding | chr1:25424692-25426900 REVERSE
HSP 1 
Score: 95.5153 bits (236), Expect = 6.25265e-21
Identity = 45/53 (84.91%), Postives = 52/53 (98.11%), Query Frame = 2
Query:   11 YREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEH 169
            YREIVP+LRL+GPTSFAP+IE AMTIVE+SGGQYHVL+IIADGQVTRSVDT++
Sbjct:  182 YREIVPQLRLSGPTSFAPIIERAMTIVEESGGQYHVLLIIADGQVTRSVDTDN 234

AT1G67800.3 6.25265e-2184.91%
copine-related | chr1:25424692-25426900 REVERSE
HSP 1 
Score: 95.5153 bits (236), Expect = 6.25265e-21
Identity = 45/53 (84.91%), Postives = 52/53 (98.11%), Query Frame = 2
Query:   11 YREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEH 169
            YREIVP+LRL+GPTSFAP+IE AMTIVE+SGGQYHVL+IIADGQVTRSVDT++
Sbjct:  182 YREIVPQLRLSGPTSFAPIIERAMTIVEESGGQYHVLLIIADGQVTRSVDTDN 234

AT1G67800.2 6.25265e-2184.91%
copine-related | chr1:25424692-25426960 REVERSE
HSP 1 
Score: 95.5153 bits (236), Expect = 6.25265e-21
Identity = 45/53 (84.91%), Postives = 52/53 (98.11%), Query Frame = 2
Query:   11 YREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEH 169
            YREIVP+LRL+GPTSFAP+IE AMTIVE+SGGQYHVL+IIADGQVTRSVDT++
Sbjct:  202 YREIVPQLRLSGPTSFAPIIERAMTIVEESGGQYHVLLIIADGQVTRSVDTDN 254

AT1G67800.1 6.25265e-2184.91%
copine-related | chr1:25424692-25426900 REVERSE
HSP 1 
Score: 95.5153 bits (236), Expect = 6.25265e-21
Identity = 45/53 (84.91%), Postives = 52/53 (98.11%), Query Frame = 2
Query:   11 YREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEH 169
            YREIVP+LRL+GPTSFAP+IE AMTIVE+SGGQYHVL+IIADGQVTRSVDT++
Sbjct:  182 YREIVPQLRLSGPTSFAPIIERAMTIVEESGGQYHVLLIIADGQVTRSVDTDN 234

AT5G63970.2 9.27328e-1773.58%
protein binding / zinc ion binding | chr5:25624232-25626142 REVERSE
HSP 1 
Score: 81.2629 bits (199), Expect = 9.27328e-17
Identity = 39/53 (73.58%), Postives = 47/53 (88.68%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVD 160
            ++RYREIVP L+L+GPTSFAPVI+ A+ IVEQ+  QYHVLVIIADGQVTR+ D
Sbjct:  123 VKRYREIVPHLKLSGPTSFAPVIDAAINIVEQNNMQYHVLVIIADGQVTRNPD 175

HSP 2 
Score: 20.7866 bits (42), Expect = 9.27328e-17
Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  168 IGKLSPQEQKTGRS 209
            +G+LSPQE+ T  S
Sbjct:  178 LGRLSPQEEATMNS 191

Blast Hits to Contigs V2 WO454

Analysis Date: 11-03-2009 (Blast: AC454_contigs_v2_vs_WO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
WO454_contig20357_v28.42975e-2789.09%
WO454_contig20357_v2
HSP 1 
Score: 114.245 bits (243), Expect = 8.42975e-27
Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 2
Query:    2 LRRYREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTE 166
            L RYRE+VP LRLAGPTSFAPVIEMA+TIVEQS GQYHVL+IIADGQVTRSVDTE
Sbjct:  121 LARYRELVPVLRLAGPTSFAPVIEMAITIVEQSXGQYHVLLIIADGQVTRSVDTE 285

HSP 2 
Score: 103.706 bits (220), Expect = 1.25403e-23
Identity = 45/55 (81.82%), Postives = 48/55 (87.27%), Query Frame = -1
Query:    1 SVSTLLVTCPSAIITNT*YWPPLCSTMVMAISITGANEVGPASRNFGTISL*RLN 165
            SVSTLLVTCPSAII NT*YWP LCST+VMAIS+TGAN+VGPASR  GT SL R N
Sbjct:  120 SVSTLLVTCPSAIINNT*YWPXLCSTIVMAISMTGANDVGPASRRTGTNSLYRAN 284

HSP 3 
Score: 72.5479 bits (152), Expect = 3.00508e-14
Identity = 25/43 (58.14%), Postives = 34/43 (79.07%), Query Frame = 1
Query:   34 TTCRTNFVCTCN*DGHDHRGAEWGPISCVSNNCRWTGNKKC*Y 162
            TTCR N +C+C+*+GH +  A+  P+SCV +NC WTG+KKC*Y
Sbjct:  153 TTCRANIICSCH*NGHHYC*AKXWPVSCVIDNC*WTGDKKC*Y 281

HSP 4 
Score: 71.1732 bits (149), Expect = 7.79218e-14
Identity = 32/55 (58.18%), Postives = 37/55 (67.27%), Query Frame = -3
Query:    2 LSINTSCYLSICNYY*HMILAPTLLHDGHGHLNYRCKRSWSCKS*FWXYFPVAPQ 166
            L INTSC+LSI NY *HMILA TLL++  GH N R K  W CKS*    F ++ Q
Sbjct:  121 LGINTSCHLSISNYQ*HMILAXTLLNNSDGHFNDRSK*CWPCKS*NRDQFSISCQ 285

WO454_contig18864_v21.13205e-2272.73%
WO454_contig18864_v2
HSP 1 
Score: 100.499 bits (213), Expect = 1.13205e-22
Identity = 40/55 (72.73%), Postives = 50/55 (90.91%), Query Frame = 2
Query:   11 YREIVPKLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLVIIADGQVTRSVDTEHRK 175
            Y++IVP LRLAGPTS+APV+E A+ IVE+SGGQYHVLV+IADGQVTRSV+T  ++
Sbjct:  213 YKKIVPNLRLAGPTSYAPVVEAAIDIVEKSGGQYHVLVLIADGQVTRSVNTSEKE 377

HSP 2 
Score: 76.2135 bits (160), Expect = 2.36799e-15
Identity = 36/52 (69.23%), Postives = 40/52 (76.92%), Query Frame = -1
Query:    7 VSTLLVTCPSAIITNT*YWPPLCSTMVMAISITGANEVGPASRNFGTISL*R 162
            V TLLVT PSA+ T+T YWPPL STM +A S TGA EVGPASR  GTI L*+
Sbjct:  226 VLTLLVTWPSAMRTSTWYWPPLFSTMSIAASTTGA*EVGPASRKLGTIFL*Q 381

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