AC454_contig27984_v2

NameAC454_contig27984_v2
AccessionID2121008
Sequence
TAATTCCCTAGCAAATTTGSGGTCCATTGAAGGGTCTTGYGGATGTGTTG
CATTGAAAGWGTAYARCCGATTTGAGAATGAAGAACAATGTGACACCCCT
ATAGAATGTGCC
Length112
Typecontig
Organism American Chestnut

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References

Dababase Accession
GFF_source SeqManPro

ESTs in this contig

Type Feature Position
EST ACCanker_314823_0889_1520 0-104
EST ACCanker_252441_0700_2097 10-106
EST ACCanker_291421_0078_1789 11-112

Blast Hits to Uniprot

Analysis Date: 11-03-2009 (Blast: AC454_v2_uniprot)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
A7PRK0_VITVI8.20967e-1289.19%
Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022535001 PE=4 SV=1
HSP 1 
Score: 73.1738 bits (178), Expect = 8.20967e-12
Identity = 33/37 (89.19%), Postives = 34/37 (91.89%), Query Frame = -2
Query:    1 AHSIGVSHCSSFSNRLYXFNATHPQDPSMDXKFAREL 111
            AHSIGVSHCSSFSNRLY FNATHPQDPSMD +FAR L
Sbjct:  198 AHSIGVSHCSSFSNRLYSFNATHPQDPSMDPEFARHL 234

A5BQ05_VITVI8.20967e-1289.19%
Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028562 PE=4 SV=1
HSP 1 
Score: 73.1738 bits (178), Expect = 8.20967e-12
Identity = 33/37 (89.19%), Postives = 34/37 (91.89%), Query Frame = -2
Query:    1 AHSIGVSHCSSFSNRLYXFNATHPQDPSMDXKFAREL 111
            AHSIGVSHCSSFSNRLY FNATHPQDPSMD +FAR L
Sbjct:  187 AHSIGVSHCSSFSNRLYSFNATHPQDPSMDPEFARHL 223

A7PRK2_VITVI1.40036e-1189.19%
Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022537001 PE=4 SV=1
HSP 1 
Score: 72.4034 bits (176), Expect = 1.40036e-11
Identity = 33/37 (89.19%), Postives = 34/37 (91.89%), Query Frame = -2
Query:    1 AHSIGVSHCSSFSNRLYXFNATHPQDPSMDXKFAREL 111
            AHSIGVSHCSSFSNRLY FNATHPQDPSMD +FAR L
Sbjct:  197 AHSIGVSHCSSFSNRLYSFNATHPQDPSMDPEFARYL 233

A7PRJ8_VITVI6.9499e-1183.78%
Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022533001 PE=4 SV=1
HSP 1 
Score: 70.0922 bits (170), Expect = 6.9499e-11
Identity = 31/37 (83.78%), Postives = 34/37 (91.89%), Query Frame = -2
Query:    1 AHSIGVSHCSSFSNRLYXFNATHPQDPSMDXKFAREL 111
            AHSIGVSHCSSFSNRLY FNATHPQDPS++ +FAR L
Sbjct:  196 AHSIGVSHCSSFSNRLYSFNATHPQDPSIEPEFARHL 232

Blast Hits to Contigs V2 CC454

Analysis Date: 11-03-2009 (Blast: AC454_contigs_v2_vs_CC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
CC454_contig23817_v22.33722e-1375.68%
CC454_contig23817_v2
HSP 1 
Score: 68.8822 bits (144), Expect = 2.33722e-13
Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = -2
Query:    1 AHSIGVSHCSSFSNRLYXFNATHPQDPSMDXKFAREL 111
            AHSIG SHCSSFS RLY F+ T+PQDPSMD  FAR+L
Sbjct:  197 AHSIGRSHCSSFSXRLYNFSDTNPQDPSMDPIFARDL 307

HSP 2 
Score: 65.0529 bits (136), Expect = 3.71669e-12
Identity = 26/36 (72.22%), Postives = 28/36 (77.78%), Query Frame = 2
Query:    5 SLANLXSIEGSCGCVALKXYXRFENEEQCDTPIECA 112
            SLAN+ SIEGSCG V+LK Y R E EEQCD P ECA
Sbjct:  196 SLANIGSIEGSCGFVSLKLYNRXEKEEQCDLPXECA 303

CC454_contig36749_v24.91501e-1288.24%
CC454_contig36749_v2
HSP 1 
Score: 41.8479 bits (85), Expect = 4.91501e-12
Identity = 15/17 (88.24%), Postives = 15/17 (88.24%), Query Frame = -2
Query:   13 YXFNATHPQDPSMDXKF 63
            Y FNATHPQDPSMD KF
Sbjct:  385 YSFNATHPQDPSMDRKF 435

HSP 2 
Score: 37.2658 bits (75), Expect = 4.91501e-12
Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = -2
Query:   70 AHSIGVSHCSSFSN 111
            AHSIGVSHCSSFSN
Sbjct:  334 AHSIGVSHCSSFSN 375

HSP 3 
Score: 39.9249 bits (81), Expect = 6.85478e-12
Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = 2
Query:   71 FENEEQCDTPIECA 112
            FENEEQCDTPIECA
Sbjct:  333 FENEEQCDTPIECA 374

HSP 4 
Score: 39.0111 bits (79), Expect = 6.85478e-12
Identity = 15/17 (88.24%), Postives = 15/17 (88.24%), Query Frame = 2
Query:   14 NLXSIEGSCGCVALKXY 64
            NL SIEGSCGCVALK Y
Sbjct:  384 NLRSIEGSCGCVALKEY 434

HSP 5 
Score: 40.0151 bits (81), Expect = 3.15226e-11
Identity = 15/24 (62.50%), Postives = 16/24 (66.67%), Query Frame = -1
Query:   14 FFILKSXXXFQCNTSXRPFNGPQI 85
            F +      FQCNTS RPFNGPQI
Sbjct:  363 FILKYGLILFQCNTSARPFNGPQI 434

HSP 6 
Score: 36.3494 bits (73), Expect = 3.15226e-11
Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = -3
Query:   69 HIL*GCHIVLHSQI 110
            HIL*GCHIVLHSQI
Sbjct:  335 HIL*GCHIVLHSQI 376

CC454_contig45332_v25.17113e-1162.16%
CC454_contig45332_v2
HSP 1 
Score: 61.0927 bits (127), Expect = 5.17113e-11
Identity = 23/37 (62.16%), Postives = 28/37 (75.68%), Query Frame = -2
Query:    1 AHSIGVSHCSSFSNRLYXFNATHPQDPSMDXKFAREL 111
            AH+IGVSHCSSFSNRLY F     QDP++D ++A  L
Sbjct:  543 AHTIGVSHCSSFSNRLYNFTGVGDQDPALDPEYAANL 653

Blast Hits to Contigs V2 CCall

Analysis Date: 11-03-2009 (Blast: AC454_contigs_v2_vs_CCall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
CCall_contig23576_v22.41725e-1375.68%
CCall_contig23576_v2
HSP 1 
Score: 68.8822 bits (144), Expect = 2.41725e-13
Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = -2
Query:    1 AHSIGVSHCSSFSNRLYXFNATHPQDPSMDXKFAREL 111
            AHSIG SHCSSFS RLY F+ T+PQDPSMD  FAR+L
Sbjct:  197 AHSIGRSHCSSFSXRLYNFSDTNPQDPSMDPIFARDL 307

HSP 2 
Score: 65.0529 bits (136), Expect = 3.43597e-12
Identity = 26/36 (72.22%), Postives = 28/36 (77.78%), Query Frame = 2
Query:    5 SLANLXSIEGSCGCVALKXYXRFENEEQCDTPIECA 112
            SLAN+ SIEGSCG V+LK Y R E EEQCD P ECA
Sbjct:  196 SLANIGSIEGSCGFVSLKLYNRXEKEEQCDLPXECA 303

CCall_contig36100_v22.71552e-1288.24%
CCall_contig36100_v2
HSP 1 
Score: 41.8479 bits (85), Expect = 2.71552e-12
Identity = 15/17 (88.24%), Postives = 15/17 (88.24%), Query Frame = -2
Query:   13 YXFNATHPQDPSMDXKF 63
            Y FNATHPQDPSMD KF
Sbjct:    1 YSFNATHPQDPSMDRKF 51

HSP 2 
Score: 38.1822 bits (77), Expect = 2.71552e-12
Identity = 15/23 (65.22%), Postives = 16/23 (69.57%), Query Frame = -2
Query:   43 AHSIGVSHCSSFSNRLYXFNATH 111
            AHSIGVSHCSSFSN     +  H
Sbjct:   33 AHSIGVSHCSSFSNTANTLSMQH 101

HSP 3 
Score: 39.5569 bits (80), Expect = 4.41187e-11
Identity = 14/15 (93.33%), Postives = 14/15 (93.33%), Query Frame = -1
Query:   14 FQCNTSXRPFNGPQI 58
            FQCNTS RPFNGPQI
Sbjct:    2 FQCNTSARPFNGPQI 46

HSP 4 
Score: 36.3494 bits (73), Expect = 4.41187e-11
Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = -3
Query:   69 HIL*GCHIVLHSQI 110
            HIL*GCHIVLHSQI
Sbjct:   59 HIL*GCHIVLHSQI 100

HSP 5 
Score: 39.9249 bits (81), Expect = 4.68903e-11
Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = 2
Query:   71 FENEEQCDTPIECA 112
            FENEEQCDTPIECA
Sbjct:   61 FENEEQCDTPIECA 102

HSP 6 
Score: 35.8912 bits (72), Expect = 4.68903e-11
Identity = 15/22 (68.18%), Postives = 16/22 (72.73%), Query Frame = 1
Query:   13 KFXVH*RVLXMCCIEXVXPI*E 78
            KF VH*RVL MCCIE V  + E
Sbjct:    1 KFAVH*RVLRMCCIERVLAVFE 66

CCall_contig44618_v25.34821e-1162.16%
CCall_contig44618_v2
HSP 1 
Score: 61.0927 bits (127), Expect = 5.34821e-11
Identity = 23/37 (62.16%), Postives = 28/37 (75.68%), Query Frame = -2
Query:    1 AHSIGVSHCSSFSNRLYXFNATHPQDPSMDXKFAREL 111
            AH+IGVSHCSSFSNRLY F     QDP++D ++A  L
Sbjct:  543 AHTIGVSHCSSFSNRLYNFTGVGDQDPALDPEYAANL 653

Blast Hits to MedicagoProt

Analysis Date: 11-03-2009 (Blast: AC454_contigs_v2_vs_MedicagoProt_20080227)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
IMGA|AC124961_15.4 Haem peroxida5.54368e-1283.78%
e, plant/fungal/bacterial chr01_pseudomolecule_IMGAG_V2 21472760-21471732 H EGN_Mt071002 20080227
HSP 1 
Score: 65.4698 bits (158), Expect = 5.54368e-12
Identity = 31/37 (83.78%), Postives = 31/37 (83.78%), Query Frame = -2
Query:    1 AHSIGVSHCSSFSNRLYXFNATHPQDPSMDXKFAREL 111
            AHSIGVSHCSSFS RLY FNAT PQDPSMD  FAR L
Sbjct:  198 AHSIGVSHCSSFSKRLYSFNATFPQDPSMDPDFARLL 234

IMGA|AC136840_7.5 Haem peroxida1.61296e-1181.08%
e, plant/fungal/bacterial chr01_pseudomolecule_IMGAG_V2 21403160-21404752 E EGN_Mt071002 20080227
HSP 1 
Score: 63.929 bits (154), Expect = 1.61296e-11
Identity = 30/37 (81.08%), Postives = 30/37 (81.08%), Query Frame = -2
Query:    1 AHSIGVSHCSSFSNRLYXFNATHPQDPSMDXKFAREL 111
            AHSIGVSHCSSFS RLY FN T PQDPSMD  FAR L
Sbjct:  198 AHSIGVSHCSSFSKRLYSFNLTFPQDPSMDPNFARLL 234

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