CCall_contig31002_v2

NameCCall_contig31002_v2
AccessionID4074088
Sequence
GGCCAATCGTGGCCAACTATCTCGAGTCTTGCAAACCTGAGCCTCCAAAA
ACCCACCGATTTGGACCCTAAATTATGCTAGAAACTTACAATTAGGGAAG
AGCGTGGCDATGAAGGCTGTAAAGTGGGTATGATGGAGCAGATCAAGAGA
GAAATCTCGGTGTCAAGATRGTCCAACATCCAAACATAGTCGAGCTCCAC
AAAGTTAYGGCGAGCAAATTCAAGATCAACTTCGCCATRGAACTCGTTTG
TGGAGGCGAGCTGTTCTGGAGAAGAAGTGGCGAGAGTCTATTTCCAAA
Length298
Typecontig
Organism Chinese Chestnut

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References

Dababase Accession
GFF_source SeqManPro

ESTs in this contig

Type Feature Position
EST CCNHS_111421_3423_1134 0-258
EST CCMHS_015571_2761_2286 55-298
EST CCWP1_001629_2779_1466 105-175

InterProScan Analysis

Analysis Date: 02-17-2010 (Interpro: CCall_contigs_v2)
SEQUENCE: CCall_contig31002_v2_2_ORF2 CRC64: 0506121189B06A34 LENGTH: 55 aa
No hits reported.
SEQUENCE: CCall_contig31002_v2_3_ORF2 CRC64: 309552BF7BF25E8F LENGTH: 58 aa
No hits reported.
SEQUENCE: CCall_contig31002_v2_5_ORF1 CRC64: 337848AFD2DF1A02 LENGTH: 51 aa
noIPR
unintegrated
unintegrated
seg [5-20]? NA seg seg seg
SEQUENCE: CCall_contig31002_v2_6_ORF2 CRC64: 2953083399DFAA85 LENGTH: 69 aa
No hits reported.
SEQUENCE: CCall_contig31002_v2_2_ORF2 CRC64: 0506121189B06A34 LENGTH: 55 aa
No hits reported.
SEQUENCE: CCall_contig31002_v2_3_ORF2 CRC64: 309552BF7BF25E8F LENGTH: 58 aa
No hits reported.
SEQUENCE: CCall_contig31002_v2_5_ORF1 CRC64: 337848AFD2DF1A02 LENGTH: 51 aa
noIPR
unintegrated
unintegrated
SEGseg seg
 NA [5-20]?       
Parent no parent
Children no children
Found in no entries
Contains no entries
GO terms none
SEQUENCE: CCall_contig31002_v2_6_ORF2 CRC64: 2953083399DFAA85 LENGTH: 69 aa
No hits reported.

Blast Hits to Contigs V2 AB454

Analysis Date: 11-17-2009 (Blast: CCall_contigs_v2_vs_AB454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
AB454_contig4077_v23.12793e-1771.43%
AB454_contig4077_v2
HSP 1 
Score: 56.0524 bits (116), Expect = 3.12793e-17
Identity = 25/35 (71.43%), Postives = 28/35 (80.00%), Query Frame = 3
Query:  162 VKXVQHPNIVELHKVXASKFKINFAXELVCGGELF 266
            +K V+H NIVELH+V ASK KI FA ELV GGELF
Sbjct:  304 MKMVKHQNIVELHEVMASKSKIYFAMELVRGGELF 408

HSP 2 
Score: 35.8912 bits (72), Expect = 3.12793e-17
Identity = 16/19 (84.21%), Postives = 16/19 (84.21%), Query Frame = 1
Query:  106 GXEGCKVGMMEQIKREISV 162
            G E  KVGMMEQIKREISV
Sbjct:  247 GREVIKVGMMEQIKREISV 303

HSP 3 
Score: 25.3524 bits (49), Expect = 3.12793e-17
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 2
Query:   74 YARNLQLGKSVAMKAV 121
            +AR+LQ  KSVAMK V
Sbjct:  199 HARHLQSXKSVAMKVV 246

HSP 4 
Score: 45.0554 bits (92), Expect = 3.40519e-12
Identity = 20/34 (58.82%), Postives = 24/34 (70.59%), Query Frame = -3
Query:  165 EQLASTNEFXGEVDLEFARXNFVELDYVWMLDXL 266
            E+LA+ NEF  E+DL FAR + V LDYV ML  L
Sbjct:  307 EKLATANEFHSEIDLGFARHHLV*LDYVLMLHHL 408

HSP 5 
Score: 30.3927 bits (60), Expect = 3.40519e-12
Identity = 11/17 (64.71%), Postives = 11/17 (64.71%), Query Frame = -2
Query:  112 HRDFSLDLLHHTHFTAF 162
            HRD SLDL HH  F  F
Sbjct:  253 HRDLSLDLFHHPDFDNF 303

HSP 6 
Score: 24.436 bits (47), Expect = 3.40519e-12
Identity = 10/15 (66.67%), Postives = 11/15 (73.33%), Query Frame = -2
Query:   76 TAFIATLFPNCKFLA 120
            T FIATLF  C+ LA
Sbjct:  201 TTFIATLFXLCRCLA 245

Blast Hits to Contigs V2 ABall

Analysis Date: 11-17-2009 (Blast: CCall_contigs_v2_vs_ABall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
ABall_contig4158_v23.18707e-1771.43%
ABall_contig4158_v2
HSP 1 
Score: 56.0524 bits (116), Expect = 3.18707e-17
Identity = 25/35 (71.43%), Postives = 28/35 (80.00%), Query Frame = 3
Query:  162 VKXVQHPNIVELHKVXASKFKINFAXELVCGGELF 266
            +K V+H NIVELH+V ASK KI FA ELV GGELF
Sbjct:  304 MKMVKHQNIVELHEVMASKSKIYFAMELVRGGELF 408

HSP 2 
Score: 35.8912 bits (72), Expect = 3.18707e-17
Identity = 16/19 (84.21%), Postives = 16/19 (84.21%), Query Frame = 1
Query:  106 GXEGCKVGMMEQIKREISV 162
            G E  KVGMMEQIKREISV
Sbjct:  247 GREVIKVGMMEQIKREISV 303

HSP 3 
Score: 25.3524 bits (49), Expect = 3.18707e-17
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 2
Query:   74 YARNLQLGKSVAMKAV 121
            +AR+LQ  KSVAMK V
Sbjct:  199 HARHLQSXKSVAMKVV 246

HSP 4 
Score: 45.0554 bits (92), Expect = 4.24958e-12
Identity = 20/34 (58.82%), Postives = 24/34 (70.59%), Query Frame = -3
Query:  165 EQLASTNEFXGEVDLEFARXNFVELDYVWMLDXL 266
            E+LA+ NEF  E+DL FAR + V LDYV ML  L
Sbjct:  307 EKLATANEFHSEIDLGFARHHLV*LDYVLMLHHL 408

HSP 5 
Score: 37.724 bits (76), Expect = 4.24958e-12
Identity = 17/27 (62.96%), Postives = 19/27 (70.37%), Query Frame = -3
Query:   81 TEISLLICSIIPTLQPSXPRSSLIVSF 161
            TEISLLICSIIPTL  S P + +   F
Sbjct:  222 TEISLLICSIIPTLITSLPTTFIATLF 302

Blast Hits to Contigs V2 AC454

Analysis Date: 11-17-2009 (Blast: CCall_contigs_v2_vs_AC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
AC454_contig16772_v21.05519e-1877.14%
AC454_contig16772_v2
HSP 1 
Score: 61.5509 bits (128), Expect = 1.05519e-18
Identity = 27/35 (77.14%), Postives = 29/35 (82.86%), Query Frame = 3
Query:  162 VKXVQHPNIVELHKVXASKFKINFAXELVCGGELF 266
            +K VQHPNIVELH+V ASK KI FA ELV GGELF
Sbjct:  526 MKMVQHPNIVELHEVMASKSKIYFAMELVRGGELF 630

HSP 2 
Score: 34.9748 bits (70), Expect = 1.05519e-18
Identity = 13/13 (100.00%), Postives = 13/13 (100.00%), Query Frame = 3
Query:  123 SGYDGADQERNLG 161
            SGYDGADQERNLG
Sbjct:  486 SGYDGADQERNLG 524

HSP 3 
Score: 28.1016 bits (55), Expect = 1.05519e-18
Identity = 12/16 (75.00%), Postives = 13/16 (81.25%), Query Frame = 2
Query:   74 YARNLQLGKSVAMKAV 121
            +ARNL  GKSVAMK V
Sbjct:  418 HARNLXSGKSVAMKVV 465

HSP 4 
Score: 56.0524 bits (116), Expect = 2.26018e-17
Identity = 24/31 (77.42%), Postives = 24/31 (77.42%), Query Frame = -3
Query:  174 EQLASTNEFXGEVDLEFARXNFVELDYVWML 266
            EQLAST E   EVDL FA  NFVELDYVWML
Sbjct:  538 EQLASTXEXHXEVDLXFAXHNFVELDYVWML 630

HSP 5 
Score: 33.6001 bits (67), Expect = 2.26018e-17
Identity = 12/13 (92.31%), Postives = 12/13 (92.31%), Query Frame = -2
Query:  124 HRDFSLDLLHHTH 162
            HRDFSLDLL HTH
Sbjct:  487 HRDFSLDLLXHTH 525

HSP 6 
Score: 30.3927 bits (60), Expect = 2.26018e-17
Identity = 12/15 (80.00%), Postives = 13/15 (86.67%), Query Frame = -2
Query:   76 TAFIATLFPNCKFLA 120
            T FIATLFP+ KFLA
Sbjct:  420 TTFIATLFPDXKFLA 464

HSP 7 
Score: 56.5106 bits (117), Expect = 2.53226e-14
Identity = 23/38 (60.53%), Postives = 26/38 (68.42%), Query Frame = 2
Query:  164 QDXPTSKHSRAPQSYGEQIQDQLRHXTRLWRRAVLEKK 277
            +D   SKHSRAP+SYG QI D LR   R WRRAV E +
Sbjct:  528 EDGTASKHSRAPRSYGXQIXDLLRXGXRXWRRAVXENR 641

HSP 8 
Score: 28.1016 bits (55), Expect = 2.53226e-14
Identity = 12/13 (92.31%), Postives = 12/13 (92.31%), Query Frame = 1
Query:  124 VGMMEQIKREISV 162
            VGM EQIKREISV
Sbjct:  487 VGMXEQIKREISV 525

HSP 9 
Score: 24.8942 bits (48), Expect = 2.53226e-14
Identity = 9/15 (60.00%), Postives = 10/15 (66.67%), Query Frame = 1
Query:   76 C*KLTIREERGXEGC 120
            C  L +REER  EGC
Sbjct:  420 CQXLXVREERXDEGC 464

HSP 10 
Score: 51.4703 bits (106), Expect = 6.46198e-11
Identity = 24/32 (75.00%), Postives = 24/32 (75.00%), Query Frame = -2
Query:  178 FSRTARLHKRVXWRS*S*ICSP*LCGARLCLD 273
            FSRTARLH R   RS S IC P*L GARLCLD
Sbjct:  542 FSRTARLHXRXPXRSRSXICXP*LRGARLCLD 637

HSP 11 
Score: 29.4763 bits (58), Expect = 6.46198e-11
Identity = 12/13 (92.31%), Postives = 12/13 (92.31%), Query Frame = -3
Query:  123 TEISLLICSIIPT 161
            TEISLLICS IPT
Sbjct:  486 TEISLLICSXIPT 524

Blast Hits to Contigs V2 CC454

Analysis Date: 11-17-2009 (Blast:CCall_contigs_v2_vs_CC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
CC454_contig31354_v24.26063e-62100.00%
CC454_contig31354_v2
HSP 1 
Score: 233.379 bits (503), Expect = 4.26063e-62
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = -2
Query:    1 LEIDSRHFFSRTARLHKRVXWRS*S*ICSP*LCGARLCLDVGXS*HRDFSLDLLHHTHFTAFIATLFPNCKFLA*FRVQIGGFLEAQVCKTRDSWPRLA 297
            LEIDSRHFFSRTARLHKRVXWRS*S*ICSP*LCGARLCLDVGXS*HRDFSLDLLHHTHFTAFIATLFPNCKFLA*FRVQIGGFLEAQVCKTRDSWPRLA
Sbjct:    1 LEIDSRHFFSRTARLHKRVXWRS*S*ICSP*LCGARLCLDVGXS*HRDFSLDLLHHTHFTAFIATLFPNCKFLA*FRVQIGGFLEAQVCKTRDSWPRLA 297

HSP 2 
Score: 232.921 bits (502), Expect = 5.8534e-62
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 2
Query:    2 ANRGQLSRVLQT*ASKNPPIWTLNYARNLQLGKSVAMKAVKWV*WSRSREKSRCQDXPTSKHSRAPQSYGEQIQDQLRHXTRLWRRAVLEKKWRESISK 298
            ANRGQLSRVLQT*ASKNPPIWTLNYARNLQLGKSVAMKAVKWV*WSRSREKSRCQDXPTSKHSRAPQSYGEQIQDQLRHXTRLWRRAVLEKKWRESISK
Sbjct:    2 ANRGQLSRVLQT*ASKNPPIWTLNYARNLQLGKSVAMKAVKWV*WSRSREKSRCQDXPTSKHSRAPQSYGEQIQDQLRHXTRLWRRAVLEKKWRESISK 298

HSP 3 
Score: 227.881 bits (491), Expect = 1.92614e-60
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 3
Query:    3 PIVANYLESCKPEPPKTHRFGP*IMLETYN*GRAWX*RL*SGYDGADQERNLGVKXVQHPNIVELHKVXASKFKINFAXELVCGGELFWRRSGESLFP 296
            PIVANYLESCKPEPPKTHRFGP*IMLETYN*GRAWX*RL*SGYDGADQERNLGVKXVQHPNIVELHKVXASKFKINFAXELVCGGELFWRRSGESLFP
Sbjct:    3 PIVANYLESCKPEPPKTHRFGP*IMLETYN*GRAWX*RL*SGYDGADQERNLGVKXVQHPNIVELHKVXASKFKINFAXELVCGGELFWRRSGESLFP 296

HSP 4 
Score: 222.84 bits (480), Expect = 6.33823e-59
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = -3
Query:    3 WK*TLATSSPEQLASTNEFXGEVDLEFARXNFVELDYVWMLDXLDTEISLLICSIIPTLQPSXPRSSLIVSF*HNLGSKSVGFWRLRFARLEIVGHDW 296
            WK*TLATSSPEQLASTNEFXGEVDLEFARXNFVELDYVWMLDXLDTEISLLICSIIPTLQPSXPRSSLIVSF*HNLGSKSVGFWRLRFARLEIVGHDW
Sbjct:    3 WK*TLATSSPEQLASTNEFXGEVDLEFARXNFVELDYVWMLDXLDTEISLLICSIIPTLQPSXPRSSLIVSF*HNLGSKSVGFWRLRFARLEIVGHDW 296

HSP 5 
Score: 126.158 bits (269), Expect = 2.62223e-46
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 1
Query:    1 GQSWPTISSLANLSLQKPTDLDPKLC*KLTIREERGXEGCKVGMMEQIKREISV 162
            GQSWPTISSLANLSLQKPTDLDPKLC*KLTIREERGXEGCKVGMMEQIKREISV
Sbjct:    1 GQSWPTISSLANLSLQKPTDLDPKLC*KLTIREERGXEGCKVGMMEQIKREISV 162

HSP 6 
Score: 73.0061 bits (153), Expect = 2.62223e-46
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 1
Query:  199 TKLXRANSRSTSPXNSFVEASCSGEEVARVYFQ 297
            TKLXRANSRSTSPXNSFVEASCSGEEVARVYFQ
Sbjct:  199 TKLXRANSRSTSPXNSFVEASCSGEEVARVYFQ 297

HSP 7 
Score: 81.712 bits (172), Expect = 1.64874e-32
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = -1
Query:    2 HXHALP*L*VSSII*GPNRWVFGGSGLQDSR*LATIG 112
            HXHALP*L*VSSII*GPNRWVFGGSGLQDSR*LATIG
Sbjct:    2 HXHALP*L*VSSII*GPNRWVFGGSGLQDSR*LATIG 112

HSP 8 
Score: 71.1732 bits (149), Expect = 1.64874e-32
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = -1
Query:  152 MAKLILNLLAXTLWSSTMFGCWTILTPRF 238
            MAKLILNLLAXTLWSSTMFGCWTILTPRF
Sbjct:  152 MAKLILNLLAXTLWSSTMFGCWTILTPRF 238

CC454_contig7111_v28.07116e-2268.42%
CC454_contig7111_v2
HSP 1 
Score: 67.0494 bits (140), Expect = 8.07116e-22
Identity = 26/38 (68.42%), Postives = 29/38 (76.32%), Query Frame = 2
Query:  164 QDXPTSKHSRAPQSYGEQIQDQLRHXTRLWRRAVLEKK 277
            +D   SKHSRAP+SYGEQIQD LRH  R WRRAV E +
Sbjct:  530 EDGSASKHSRAPRSYGEQIQDLLRHGARTWRRAVFENR 643

HSP 2 
Score: 34.9748 bits (70), Expect = 8.07116e-22
Identity = 13/13 (100.00%), Postives = 13/13 (100.00%), Query Frame = 3
Query:  123 SGYDGADQERNLG 161
            SGYDGADQERNLG
Sbjct:  488 SGYDGADQERNLG 526

HSP 3 
Score: 29.0181 bits (57), Expect = 8.07116e-22
Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 2
Query:   74 YARNLQLGKSVAMKAV 121
            +ARNL+ GKSVAMK V
Sbjct:  420 HARNLKSGKSVAMKVV 467

HSP 4 
Score: 22.1449 bits (42), Expect = 8.07116e-22
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 1
Query:  271 EEVARVYFQ 297
            E+VARVYFQ
Sbjct:  660 EDVARVYFQ 686

HSP 5 
Score: 61.5509 bits (128), Expect = 1.45945e-20
Identity = 26/34 (76.47%), Postives = 28/34 (82.35%), Query Frame = -3
Query:  165 EQLASTNEFXGEVDLEFARXNFVELDYVWMLDXL 266
            +QLAST E  GEVDL FAR NFVELDYVWML+ L
Sbjct:  531 KQLASTYELHGEVDLGFARHNFVELDYVWMLNHL 632

HSP 6 
Score: 40.4733 bits (82), Expect = 1.45945e-20
Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = -2
Query:  121 HRDFSLDLLHHTHF 162
            HRDFSLDLLHHTHF
Sbjct:  486 HRDFSLDLLHHTHF 527

HSP 7 
Score: 29.9345 bits (59), Expect = 1.45945e-20
Identity = 12/15 (80.00%), Postives = 13/15 (86.67%), Query Frame = -2
Query:   76 TAFIATLFPNCKFLA 120
            T FIATLFP+ KFLA
Sbjct:  422 TTFIATLFPDFKFLA 466

HSP 8 
Score: 61.5509 bits (128), Expect = 1.46392e-18
Identity = 27/35 (77.14%), Postives = 29/35 (82.86%), Query Frame = 3
Query:  162 VKXVQHPNIVELHKVXASKFKINFAXELVCGGELF 266
            +K VQHPNIVELH+V ASK KI FA ELV GGELF
Sbjct:  528 MKMVQHPNIVELHEVMASKSKIYFAMELVRGGELF 632

HSP 9 
Score: 34.5166 bits (69), Expect = 1.46392e-18
Identity = 13/13 (100.00%), Postives = 13/13 (100.00%), Query Frame = 2
Query:  122 KWV*WSRSREKSR 160
            KWV*WSRSREKSR
Sbjct:  487 KWV*WSRSREKSR 525

HSP 10 
Score: 29.0181 bits (57), Expect = 1.46392e-18
Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 1
Query:   76 C*KLTIREERGXEGC 120
            C +L +REERG EGC
Sbjct:  422 CQELEVREERGNEGC 466

HSP 11 
Score: 58.3434 bits (121), Expect = 7.18502e-14
Identity = 26/36 (72.22%), Postives = 27/36 (75.00%), Query Frame = -2
Query:  166 FSRTARLHKRVXWRS*S*ICSP*LCGARLCLDVGXS 273
            FS+TARLH R  WRS S ICSP*L GARLCLD   S
Sbjct:  532 FSKTARLHVRAPWRSRSWICSP*LRGARLCLDAEPS 639

HSP 12 
Score: 33.6001 bits (67), Expect = 7.18502e-14
Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = -3
Query:  120 TEISLLICSIIPTL 161
            TEISLLICSIIPTL
Sbjct:  485 TEISLLICSIIPTL 526

CC454_contig40720_v23.48444e-2183.87%
CC454_contig40720_v2
HSP 1 
Score: 62.0091 bits (129), Expect = 3.48444e-21
Identity = 26/31 (83.87%), Postives = 27/31 (87.10%), Query Frame = -3
Query:  174 EQLASTNEFXGEVDLEFARXNFVELDYVWML 266
            EQLAST+EF  EVDL FAR NFVELDYVWML
Sbjct:  443 EQLASTDEFHSEVDL*FARHNFVELDYVWML 535

HSP 2 
Score: 36.3494 bits (73), Expect = 3.48444e-21
Identity = 13/18 (72.22%), Postives = 14/18 (77.78%), Query Frame = -2
Query:  109 HRDFSLDLLHHTHFTAFI 162
            HRDFSLDLL HTH   F+
Sbjct:  377 HRDFSLDLLRHTHLDHFL 430

HSP 3 
Score: 34.9748 bits (70), Expect = 3.48444e-21
Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = -2
Query:   76 TAFIATLFPNCKFLA 120
            T FIATLFP+CKFLA
Sbjct:  325 TTFIATLFPDCKFLA 369

HSP 4 
Score: 65.6747 bits (137), Expect = 1.1941e-20
Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = 2
Query:  164 QDXPTSKHSRAPQSYGEQIQDQLRHXTRLWRRAVLEKK 277
            +D   SKHSRAP+SYGEQI+D LR+ TR WRRAVLE +
Sbjct:  433 EDGTASKHSRAPRSYGEQIKDLLRYGTRPWRRAVLENR 546

HSP 5 
Score: 34.9748 bits (70), Expect = 1.1941e-20
Identity = 13/13 (100.00%), Postives = 13/13 (100.00%), Query Frame = 3
Query:  123 SGYDGADQERNLG 161
            SGYDGADQERNLG
Sbjct:  391 SGYDGADQERNLG 429

HSP 6 
Score: 30.8509 bits (61), Expect = 1.1941e-20
Identity = 13/16 (81.25%), Postives = 14/16 (87.50%), Query Frame = 2
Query:   74 YARNLQLGKSVAMKAV 121
            +ARNLQ GKSVAMK V
Sbjct:  323 HARNLQSGKSVAMKVV 370

HSP 7 
Score: 61.5509 bits (128), Expect = 1.39919e-17
Identity = 27/35 (77.14%), Postives = 29/35 (82.86%), Query Frame = 3
Query:  162 VKXVQHPNIVELHKVXASKFKINFAXELVCGGELF 266
            +K VQHPNIVELH+V ASK KI FA ELV GGELF
Sbjct:  431 MKMVQHPNIVELHEVMASKSKIYFAMELVRGGELF 535

HSP 8 
Score: 30.8509 bits (61), Expect = 1.39919e-17
Identity = 11/15 (73.33%), Postives = 12/15 (80.00%), Query Frame = 1
Query:   76 C*KLTIREERGXEGC 120
            C KLT+REER  EGC
Sbjct:  325 CQKLTVREERSDEGC 369

HSP 9 
Score: 28.5598 bits (56), Expect = 1.39919e-17
Identity = 12/14 (85.71%), Postives = 13/14 (92.86%), Query Frame = 1
Query:  121 KVGMMEQIKREISV 162
            +VGM EQIKREISV
Sbjct:  389 QVGMTEQIKREISV 430

HSP 10 
Score: 54.2195 bits (112), Expect = 5.67838e-12
Identity = 26/32 (81.25%), Postives = 26/32 (81.25%), Query Frame = -2
Query:  178 FSRTARLHKRVXWRS*S*ICSP*LCGARLCLD 273
            FSRTARLH RV  RS S ICSP*L GARLCLD
Sbjct:  447 FSRTARLHGRVP*RSRSLICSP*LRGARLCLD 542

HSP 11 
Score: 31.3091 bits (62), Expect = 5.67838e-12
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = -3
Query:  123 TEISLLICSIIPT 161
            TEISLLICS+IPT
Sbjct:  391 TEISLLICSVIPT 429

Blast Hits to Contig V2 Oall

Analysis Date: 11-17-2009 (Blast: CCall_contigs_v2_vs_Oall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
Oall_contig34983_v21.01322e-1980.00%
Oall_contig34983_v2
HSP 1 
Score: 58.3434 bits (121), Expect = 1.01322e-19
Identity = 24/30 (80.00%), Postives = 25/30 (83.33%), Query Frame = -3
Query:  174 QLASTNEFXGEVDLEFARXNFVELDYVWML 263
            QLAST E  GEVDL FAR NF+ELDYVWML
Sbjct:  460 QLASTXEXHGEVDLXFARHNFMELDYVWML 549

HSP 2 
Score: 40.4733 bits (82), Expect = 1.01322e-19
Identity = 14/18 (77.78%), Postives = 15/18 (83.33%), Query Frame = -2
Query:  109 HRDFSLDLLHHTHFTAFI 162
            HRDF LDLLHHTHF  F+
Sbjct:  394 HRDFXLDLLHHTHFDHFL 447

HSP 3 
Score: 29.9345 bits (59), Expect = 1.01322e-19
Identity = 12/15 (80.00%), Postives = 13/15 (86.67%), Query Frame = -2
Query:   76 TAFIATLFPNCKFLA 120
            T FIATLFP+ KFLA
Sbjct:  342 TTFIATLFPDFKFLA 386

HSP 4 
Score: 61.5509 bits (128), Expect = 1.52917e-19
Identity = 27/35 (77.14%), Postives = 29/35 (82.86%), Query Frame = 3
Query:  162 VKXVQHPNIVELHKVXASKFKINFAXELVCGGELF 266
            +K VQHPNIVELH+V ASK KI FA ELV GGELF
Sbjct:  448 MKMVQHPNIVELHEVMASKSKIYFAMELVRGGELF 552

HSP 5 
Score: 32.2255 bits (64), Expect = 1.52917e-19
Identity = 12/13 (92.31%), Postives = 12/13 (92.31%), Query Frame = 3
Query:  123 SGYDGADQERNLG 161
            SGYDGADQE NLG
Sbjct:  408 SGYDGADQEXNLG 446

HSP 6 
Score: 29.0181 bits (57), Expect = 1.52917e-19
Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 2
Query:   74 YARNLQLGKSVAMKAV 121
            +ARNL+ GKSVAMK V
Sbjct:  340 HARNLKSGKSVAMKVV 387

HSP 7 
Score: 22.1449 bits (42), Expect = 1.52917e-19
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 1
Query:  271 EEVARVYFQ 297
            E+VARVYFQ
Sbjct:  580 EDVARVYFQ 606

HSP 8 
Score: 61.0927 bits (127), Expect = 1.86473e-17
Identity = 25/38 (65.79%), Postives = 27/38 (71.05%), Query Frame = 2
Query:  164 QDXPTSKHSRAPQSYGEQIQDQLRHXTRLWRRAVLEKK 277
            +D   SKHSRAP SYGEQI D LRH  R WRRAV E +
Sbjct:  450 EDGTASKHSRAP*SYGEQIXDLLRHGXRXWRRAVXENR 563

HSP 9 
Score: 31.7673 bits (63), Expect = 1.86473e-17
Identity = 12/13 (92.31%), Postives = 12/13 (92.31%), Query Frame = 2
Query:  122 KWV*WSRSREKSR 160
            KWV*WSRSR KSR
Sbjct:  407 KWV*WSRSRXKSR 445

HSP 10 
Score: 28.1016 bits (55), Expect = 1.86473e-17
Identity = 10/15 (66.67%), Postives = 11/15 (73.33%), Query Frame = 1
Query:   76 C*KLTIREERGXEGC 120
            C  L +REERG EGC
Sbjct:  342 CQXLEVREERGDEGC 386

HSP 11 
Score: 56.5106 bits (117), Expect = 2.00586e-13
Identity = 25/32 (78.12%), Postives = 25/32 (78.12%), Query Frame = -2
Query:  178 FSRTARLHKRVXWRS*S*ICSP*LCGARLCLD 273
            FS TARLH R  WRS S ICSP*L GARLCLD
Sbjct:  464 FSXTARLHXRXPWRSRSXICSP*LHGARLCLD 559

HSP 12 
Score: 33.6001 bits (67), Expect = 2.00586e-13
Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = -3
Query:  120 TEISLLICSIIPTL 161
            TEISLLICSIIPTL
Sbjct:  405 TEISLLICSIIPTL 446

Oall_contig12107_v26.87247e-1160.00%
Oall_contig12107_v2
HSP 1 
Score: 50.0956 bits (103), Expect = 6.87247e-11
Identity = 21/35 (60.00%), Postives = 25/35 (71.43%), Query Frame = 3
Query:  162 VKXVQHPNIVELHKVXASKFKINFAXELVCGGELF 266
            +K V+HPNIV LH+V AS+ KI    E V GGELF
Sbjct:  202 MKIVRHPNIVRLHEVLASQTKIYIVLEFVTGGELF 306

HSP 2 
Score: 23.5196 bits (45), Expect = 6.87247e-11
Identity = 8/18 (44.44%), Postives = 14/18 (77.78%), Query Frame = 2
Query:   68 LNYARNLQLGKSVAMKAV 121
            + +ARN + G+SVA+K +
Sbjct:  367 VKFARNTETGESVAVKVL 420

HSP 3 
Score: 22.6031 bits (43), Expect = 6.87247e-11
Identity = 8/11 (72.73%), Postives = 11/11 (100.00%), Query Frame = 1
Query:  130 MMEQIKREISV 162
            M++QIKREIS+
Sbjct:  307 MVDQIKREISI 339

Blast Hits to Contig V2 RO454

Analysis Date: 11-17-2009 (Blast: CCall_contigs_v2_vs_RO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
RO454_contig24293_v27.17088e-1968.42%
RO454_contig24293_v2
HSP 1 
Score: 63.8419 bits (133), Expect = 7.17088e-19
Identity = 26/38 (68.42%), Postives = 28/38 (73.68%), Query Frame = 2
Query:  164 QDXPTSKHSRAPQSYGEQIQDQLRHXTRLWRRAVLEKK 277
            +D   SKHSRAP SYGEQIQD LRH  R WRRAV E +
Sbjct: 1432 EDGTASKHSRAP*SYGEQIQDLLRHGXRXWRRAVXENR 1545

HSP 2 
Score: 57.8852 bits (120), Expect = 7.17088e-19
Identity = 24/30 (80.00%), Postives = 25/30 (83.33%), Query Frame = -3
Query:  174 QLASTNEFXGEVDLEFARXNFVELDYVWML 263
            QLAST E  GEVDL FAR NF+ELDYVWML
Sbjct: 1446 QLASTXEXHGEVDLGFARHNFMELDYVWML 1535

HSP 3 
Score: 37.2658 bits (75), Expect = 7.17088e-19
Identity = 13/18 (72.22%), Postives = 14/18 (77.78%), Query Frame = -2
Query:  109 HRDFSLDLLHHTHFTAFI 162
            HRDF LDLLHHTH   F+
Sbjct: 1548 HRDFXLDLLHHTHXDHFL 1601

HSP 4 
Score: 32.2255 bits (64), Expect = 7.17088e-19
Identity = 12/13 (92.31%), Postives = 12/13 (92.31%), Query Frame = 3
Query:  123 SGYDGADQERNLG 161
            SGYDGADQE NLG
Sbjct: 1549 SGYDGADQEXNLG 1587

HSP 5 
Score: 29.9345 bits (59), Expect = 7.17088e-19
Identity = 12/15 (80.00%), Postives = 13/15 (86.67%), Query Frame = -2
Query:   76 TAFIATLFPNCKFLA 120
            T FIATLFP+ KFLA
Sbjct: 1609 TTFIATLFPDFKFLA 1653

HSP 6 
Score: 29.0181 bits (57), Expect = 7.17088e-19
Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 2
Query:   74 YARNLQLGKSVAMKAV 121
            +ARNL+ GKSVAMK V
Sbjct: 1608 HARNLKSGKSVAMKVV 1655

HSP 7 
Score: 61.5509 bits (128), Expect = 4.51345e-18
Identity = 27/35 (77.14%), Postives = 29/35 (82.86%), Query Frame = 3
Query:  162 VKXVQHPNIVELHKVXASKFKINFAXELVCGGELF 266
            +K VQHPNIVELH+V ASK KI FA ELV GGELF
Sbjct: 1443 MKMVQHPNIVELHEVMASKSKIYFAMELVRGGELF 1547

HSP 8 
Score: 31.7673 bits (63), Expect = 4.51345e-18
Identity = 12/13 (92.31%), Postives = 12/13 (92.31%), Query Frame = 2
Query:  122 KWV*WSRSREKSR 160
            KWV*WSRSR KSR
Sbjct: 1550 KWV*WSRSRXKSR 1588

HSP 9 
Score: 29.0181 bits (57), Expect = 4.51345e-18
Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 1
Query:   76 C*KLTIREERGXEGC 120
            C +L +REERG EGC
Sbjct: 1609 CQELEVREERGDEGC 1653

HSP 10 
Score: 56.5106 bits (117), Expect = 4.21671e-13
Identity = 25/32 (78.12%), Postives = 25/32 (78.12%), Query Frame = -2
Query:  178 FSRTARLHKRVXWRS*S*ICSP*LCGARLCLD 273
            FS TARLH R  WRS S ICSP*L GARLCLD
Sbjct: 1436 FSXTARLHXRXPWRSRSWICSP*LHGARLCLD 1531

HSP 11 
Score: 31.7673 bits (63), Expect = 4.21671e-13
Identity = 13/13 (100.00%), Postives = 13/13 (100.00%), Query Frame = -3
Query:  123 TEISLLICSIIPT 161
            TEISLLICSIIPT
Sbjct: 1549 TEISLLICSIIPT 1587

RO454_contig8066_v24.28532e-1160.00%
RO454_contig8066_v2
HSP 1 
Score: 50.0956 bits (103), Expect = 4.28532e-11
Identity = 21/35 (60.00%), Postives = 25/35 (71.43%), Query Frame = 3
Query:  162 VKXVQHPNIVELHKVXASKFKINFAXELVCGGELF 266
            +K V+HPNIV LH+V AS+ KI    E V GGELF
Sbjct:  202 MKIVRHPNIVRLHEVLASQTKIYIVLEFVTGGELF 306

HSP 2 
Score: 23.5196 bits (45), Expect = 4.28532e-11
Identity = 8/18 (44.44%), Postives = 14/18 (77.78%), Query Frame = 2
Query:   68 LNYARNLQLGKSVAMKAV 121
            + +ARN + G+SVA+K +
Sbjct:  367 VKFARNTETGESVAVKVL 420

HSP 3 
Score: 22.6031 bits (43), Expect = 4.28532e-11
Identity = 8/11 (72.73%), Postives = 11/11 (100.00%), Query Frame = 1
Query:  130 MMEQIKREISV 162
            M++QIKREIS+
Sbjct:  307 MVDQIKREISI 339

Blast Hits to Contigs V2 WO454

Analysis Date: 11-17-2009 (Blast: CCall_contigs_v2_vs_WO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
WO454_contig6891_v23.02042e-2268.42%
WO454_contig6891_v2
HSP 1 
Score: 65.2165 bits (136), Expect = 3.02042e-22
Identity = 26/38 (68.42%), Postives = 28/38 (73.68%), Query Frame = 2
Query:  164 QDXPTSKHSRAPQSYGEQIQDQLRHXTRLWRRAVLEKK 277
            +D   SKHSRAP SYGEQIQD LRH  R WRRAV E +
Sbjct:  440 EDGTASKHSRAPXSYGEQIQDLLRHGXRXWRRAVXENR 553

HSP 2 
Score: 34.9748 bits (70), Expect = 3.02042e-22
Identity = 13/13 (100.00%), Postives = 13/13 (100.00%), Query Frame = 3
Query:  123 SGYDGADQERNLG 161
            SGYDGADQERNLG
Sbjct:  398 SGYDGADQERNLG 436

HSP 3 
Score: 30.8509 bits (61), Expect = 3.02042e-22
Identity = 11/15 (73.33%), Postives = 12/15 (80.00%), Query Frame = 1
Query:   76 C*KLTIREERGXEGC 120
            C KL +REERG EGC
Sbjct:  332 CQKLXVREERGDEGC 376

HSP 4 
Score: 22.1449 bits (42), Expect = 3.02042e-22
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 1
Query:  271 EEVARVYFQ 297
            E+VARVYFQ
Sbjct:  570 EDVARVYFQ 596

HSP 5 
Score: 57.427 bits (119), Expect = 1.35061e-20
Identity = 25/32 (78.12%), Postives = 25/32 (78.12%), Query Frame = -2
Query:  178 FSRTARLHKRVXWRS*S*ICSP*LCGARLCLD 273
            FS TARLH R  WRS S ICSP*L GARLCLD
Sbjct:  454 FSXTARLHXRXPWRSRSWICSP*LXGARLCLD 549

HSP 6 
Score: 42.7643 bits (87), Expect = 1.35061e-20
Identity = 15/18 (83.33%), Postives = 16/18 (88.89%), Query Frame = -2
Query:  109 HRDFSLDLLHHTHFTAFI 162
            HRDFSLDLLHHTHF  F+
Sbjct:  384 HRDFSLDLLHHTHFDHFL 437

HSP 7 
Score: 30.3927 bits (60), Expect = 1.35061e-20
Identity = 12/15 (80.00%), Postives = 13/15 (86.67%), Query Frame = -2
Query:   76 TAFIATLFPNCKFLA 120
            T FIATLFP+ KFLA
Sbjct:  332 TTFIATLFPDXKFLA 376

HSP 8 
Score: 61.5509 bits (128), Expect = 1.01081e-18
Identity = 27/35 (77.14%), Postives = 29/35 (82.86%), Query Frame = 3
Query:  162 VKXVQHPNIVELHKVXASKFKINFAXELVCGGELF 266
            +K VQHPNIVELH+V ASK KI FA ELV GGELF
Sbjct:  438 MKMVQHPNIVELHEVMASKSKIYFAMELVRGGELF 542

HSP 9 
Score: 34.5166 bits (69), Expect = 1.01081e-18
Identity = 13/13 (100.00%), Postives = 13/13 (100.00%), Query Frame = 2
Query:  122 KWV*WSRSREKSR 160
            KWV*WSRSREKSR
Sbjct:  397 KWV*WSRSREKSR 435

HSP 10 
Score: 28.1016 bits (55), Expect = 1.01081e-18
Identity = 12/16 (75.00%), Postives = 13/16 (81.25%), Query Frame = 2
Query:   74 YARNLQLGKSVAMKAV 121
            +ARNL  GKSVAMK V
Sbjct:  330 HARNLXSGKSVAMKVV 377

HSP 11 
Score: 56.9688 bits (118), Expect = 8.34339e-16
Identity = 24/30 (80.00%), Postives = 24/30 (80.00%), Query Frame = -3
Query:  174 QLASTNEFXGEVDLEFARXNFVELDYVWML 263
            QLAST E  GEVDL FAR NF ELDYVWML
Sbjct:  450 QLASTXEXHGEVDLGFARHNFXELDYVWML 539

HSP 12 
Score: 33.6001 bits (67), Expect = 8.34339e-16
Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = -3
Query:  120 TEISLLICSIIPTL 161
            TEISLLICSIIPTL
Sbjct:  395 TEISLLICSIIPTL 436

HSP 13 
Score: 23.5196 bits (45), Expect = 8.34339e-16
Identity = 10/15 (66.67%), Postives = 10/15 (66.67%), Query Frame = -3
Query:   75 QPSXPRSSLIVSF*H 119
            QPS PRSS   SF H
Sbjct:  331 QPSSPRSSRTXSFWH 375

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