WO454_contig252_v2

NameWO454_contig252_v2
AccessionID3257898
Sequence
CTCTCTGTGTGGCGGCTCTTGTTGTTGTTTGGTTCTGAGATTGGATCGGT
GCTTGTGTTTCATTCTTTGCGTTTAAATCTTTGGGGGTGACTTTTTCGAT
CTGAAACTGAGAGATCCGTTTGGGATTTTTTTTCCTTCAAGAACCGCCAT
GTTTGCGGCTACACAGCAGCCACAACAACAACAACACCAACAACACCAAC
ATCAGAAACAACAACAACAACAACAACTACCACCTMAACAACAACAACAA
CAACAACAACAACAAKTWCAACTCCAGCCACAGACACAGACACAGGCAGA
GATTAATGAGCCACAGAAGCTAGCGCCTCGCCGCACATCTGAAATGGACT
CTGATAAGGAAATGTCTGCTGCTGTAATTGAGGGGAATGATGCAGTTACT
GGACACATCATTTCAACCACCATTGGAGGC
Length430
Typecontig
Organism White Oak

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References

Dababase Accession
GFF_source SeqManPro

ESTs in this contig

Type Feature Position
EST WOB_025062_2955_1297 0-262
EST WOB_041633_2709_0623 0-275
microsatellite WO454_contig252_v2-ssr172 171 186 0
microsatellite WO454_contig252_v2-ssr207 206 227 0
EST WOB_091438_1677_1436 216-430
microsatellite WO454_contig252_v2-ssr237 236 263 0

InterProScan Analysis

Analysis Date: 11-18-2009 (Interpro: WO454_contigs_v2)
SEQUENCE: WO454_contig252_v2_1_ORF2 CRC64: D7176374D7110388 LENGTH: 71 aa
noIPR
unintegrated
unintegrated
seg [25-68]? NA seg seg seg
SEQUENCE: WO454_contig252_v2_2_ORF2 CRC64: 7B4377692A51E811 LENGTH: 118 aa
noIPR
unintegrated
unintegrated
seg [29-73]? NA seg seg seg
SEQUENCE: WO454_contig252_v2_3_ORF2 CRC64: 0AA9DE9B76A2D1F7 LENGTH: 70 aa
noIPR
unintegrated
unintegrated
seg [15-70]? NA seg seg seg
SEQUENCE: WO454_contig252_v2_4_ORF1 CRC64: EF04804319004AB2 LENGTH: 75 aa
InterPro
IPR013032
Conserved_site
EGF-like region, conserved site
PS00022 [58-69]? NA PS00022 EGF_1[59-70]? NA PS00022 EGF_1 EGF_1
PS01186 [46-61]? NA PS01186 EGF_2 EGF_2
noIPR
unintegrated
unintegrated
seg [46-74]? NA seg seg seg
SEQUENCE: WO454_contig252_v2_1_ORF2 CRC64: D7176374D7110388 LENGTH: 71 aa
noIPR
unintegrated
unintegrated
SEGseg seg
 NA [25-68]?       
Parent no parent
Children no children
Found in no entries
Contains no entries
GO terms none
SEQUENCE: WO454_contig252_v2_2_ORF2 CRC64: 7B4377692A51E811 LENGTH: 118 aa
noIPR
unintegrated
unintegrated
SEGseg seg
 NA [29-73]?       
Parent no parent
Children no children
Found in no entries
Contains no entries
GO terms none
SEQUENCE: WO454_contig252_v2_3_ORF2 CRC64: 0AA9DE9B76A2D1F7 LENGTH: 70 aa
noIPR
unintegrated
unintegrated
SEGseg seg
 NA [15-70]?       
Parent no parent
Children no children
Found in no entries
Contains no entries
GO terms none
SEQUENCE: WO454_contig252_v2_4_ORF1 CRC64: EF04804319004AB2 LENGTH: 75 aa
InterPro
IPR013032
Conserved_site
EGF-like region, conserved site
PROSITEPS00022EGF_1
 NA [58-69]?   NA [59-70]?     
PROSITEPS01186EGF_2
 NA [46-61]?       
Parent no parent
Children no children
Found in IPR000742 IPR001169 IPR001336 IPR001438 IPR001491 IPR001881 IPR002049 IPR006209 IPR006210 IPR008297 IPR010423 IPR011170 IPR011398 IPR012012 IPR012013 IPR012111 IPR012224 IPR013091 IPR013111 IPR014394 IPR015149 IPR015435 IPR015437 IPR015440 IPR015442 IPR015446 IPR015455 IPR015497 IPR015781 IPR015812 IPR016316 IPR016317 IPR016348 IPR017047 IPR017048 IPR017050 IPR017369 IPR017430 IPR020696
Contains no entries
GO terms none
noIPR
unintegrated
unintegrated
SEGseg seg
 NA [46-74]?       
Parent no parent
Children no children
Found in no entries
Contains no entries
GO terms none

Blast Hits to Contigs V2 AC454

Analysis Date: 11-18-2009 (Blast: WO454_contigs_v2_vs_AC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
AC454_contig15388_v24.12818e-2397.78%
AC454_contig15388_v2
HSP 1 
Score: 103.706 bits (220), Expect = 4.12818e-23
Identity = 44/45 (97.78%), Postives = 44/45 (97.78%), Query Frame = 2
Query:  296 AEINEPQKLAPRRTSEMDSDKEMSAAVIEGNDAVTGHIISTTIGG 430
            AEINEPQKL PRRTSEMDSDKEMSAAVIEGNDAVTGHIISTTIGG
Sbjct:  560 AEINEPQKLGPRRTSEMDSDKEMSAAVIEGNDAVTGHIISTTIGG 694

HSP 2 
Score: 102.79 bits (218), Expect = 7.79161e-23
Identity = 44/45 (97.78%), Postives = 44/45 (97.78%), Query Frame = -2
Query:  295 PPMVVEMMCPVTASFPSITAADISLSESISDVRRGASFCGSLISA 429
            PPMVVEMMCPVTASFPSITAADISLSESISDVRRG SFCGSLISA
Sbjct:  561 PPMVVEMMCPVTASFPSITAADISLSESISDVRRGPSFCGSLISA 695

HSP 3 
Score: 81.2538 bits (171), Expect = 2.36892e-16
Identity = 33/35 (94.29%), Postives = 33/35 (94.29%), Query Frame = -1
Query:  326 ASNGG*NDVSSNCIIPLNYSSRHFLIRVHFRCAAR 430
            ASNGG NDVSSNCIIPLNYSS HFLIRVHFRCAAR
Sbjct:  560 ASNGGRNDVSSNCIIPLNYSSGHFLIRVHFRCAAR 664

HSP 4 
Score: 75.2971 bits (158), Expect = 1.47129e-14
Identity = 32/45 (71.11%), Postives = 33/45 (73.33%), Query Frame = -3
Query:  294 LQWWLK*CVXXXXXXXXXXXQTFPYQSPFQMCGEALASVAH*SLP 428
            LQWW K*CV           +TFPYQSPFQMCGEALASVAH*SLP
Sbjct:  562 LQWWSK*CVQ*LHHSPQLQQRTFPYQSPFQMCGEALASVAH*SLP 696

HSP 5 
Score: 49.6374 bits (102), Expect = 5.90723e-11
Identity = 21/34 (61.76%), Postives = 22/34 (64.71%), Query Frame = 3
Query:  327 LAAHLKWTLIRKCXXXXXXXXXXXXDTSFQPPLE 428
            LAAHLKWTLIRKC            DTSF+PPLE
Sbjct:  562 LAAHLKWTLIRKCPLL*LRGMMQLLDTSFRPPLE 663

HSP 6 
Score: 32.2255 bits (64), Expect = 5.90723e-11
Identity = 15/16 (93.75%), Postives = 15/16 (93.75%), Query Frame = 1
Query:  295 GRD**ATEASASPHI* 342
            GRD**ATEA ASPHI*
Sbjct:  648 GRD**ATEARASPHI* 695

Blast Hits to Contigs V2 CC454

Analysis Date: 11-18-2009 (Blast: WO454_contigs_v2_vs_CC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
CC454_contig24952_v21.29202e-2496.15%
CC454_contig24952_v2
HSP 1 
Score: 66.1329 bits (138), Expect = 1.29202e-24
Identity = 25/26 (96.15%), Postives = 25/26 (96.15%), Query Frame = 1
Query:   85 G*LFRSETERSVWDFFSFKNRHVCGY 162
            G LFRSETERSVWDFFSFKNRHVCGY
Sbjct:  425 GGLFRSETERSVWDFFSFKNRHVCGY 502

HSP 2 
Score: 62.9255 bits (131), Expect = 1.29202e-24
Identity = 25/31 (80.65%), Postives = 27/31 (87.10%), Query Frame = 3
Query:    3 LCVAALVVVWF*DWIGACVSFFAFKSLGVTF 95
            L VAALV+VWF*DWIGACVSFF F+SLG  F
Sbjct:  491 LSVAALVIVWF*DWIGACVSFFVFESLGGLF 583

HSP 3 
Score: 64.7583 bits (135), Expect = 1.1561e-23
Identity = 26/31 (83.87%), Postives = 26/31 (83.87%), Query Frame = -3
Query:    3 KSHPQRFKRKE*NTSTDPISEPNNNKSRHTE 95
            K  PQRFK KE NTSTDPISEPNNNKSRH E
Sbjct:  491 KKSPQRFKHKERNTSTDPISEPNNNKSRHRE 583

HSP 4 
Score: 61.0927 bits (127), Expect = 1.1561e-23
Identity = 25/28 (89.29%), Postives = 27/28 (96.43%), Query Frame = -2
Query:   79 VAANMAVLEGKKIPNGSLSFRSKKSPPK 162
            VAANMAVLEGKK+PNGSLSFRSKKSP +
Sbjct:  425 VAANMAVLEGKKVPNGSLSFRSKKSPQR 508

HSP 5 
Score: 60.1762 bits (125), Expect = 8.46824e-16
Identity = 25/27 (92.59%), Postives = 26/27 (96.30%), Query Frame = -1
Query:   80 SRKHGGS*RKKNPKRISQFQIEKVTPK 160
            SRKHGGS*RKK+PKRISQFQIEKV PK
Sbjct:  427 SRKHGGS*RKKSPKRISQFQIEKVPPK 507

HSP 6 
Score: 39.0986 bits (79), Expect = 8.46824e-16
Identity = 16/21 (76.19%), Postives = 16/21 (76.19%), Query Frame = -1
Query:   32 KVTPKDLNAKNETQAPIQSQN 94
            K  PKD N K ETQAPIQSQN
Sbjct:  492 KSPPKDSNTKKETQAPIQSQN 554

HSP 7 
Score: 69.7986 bits (146), Expect = 1.25608e-12
Identity = 30/44 (68.18%), Postives = 32/44 (72.73%), Query Frame = -2
Query:    1 KKIPNGSLSFRSKKSPPKI*TQRMKHKHRSNLRTKQQQEPPHRE 132
            KK P     F+ +K PPKI TQR KHKHRSNLRTKQ QEPP RE
Sbjct:  454 KKSPKRISQFQIEKVPPKIQTQRKKHKHRSNLRTKQ*QEPPQRE 585

HSP 8 
Score: 61.5509 bits (128), Expect = 2.00275e-12
Identity = 24/25 (96.00%), Postives = 24/25 (96.00%), Query Frame = 2
Query:   86 GDFFDLKLRDPFGIFFPSRTAMFAA 160
            GDFFDLKLRDPFG FFPSRTAMFAA
Sbjct:  427 GDFFDLKLRDPFGTFFPSRTAMFAA 501

HSP 9 
Score: 26.2688 bits (51), Expect = 2.00275e-12
Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = 2
Query:   59 FILCV*IFGGDF 94
            F LCV*IFGG F
Sbjct:  492 FFLCV*IFGGTF 527

CC454_contig19603_v27.79583e-2397.78%
CC454_contig19603_v2
HSP 1 
Score: 103.706 bits (220), Expect = 7.79583e-23
Identity = 44/45 (97.78%), Postives = 44/45 (97.78%), Query Frame = 2
Query:  296 AEINEPQKLAPRRTSEMDSDKEMSAAVIEGNDAVTGHIISTTIGG 430
            AEINEPQKL PRRTSEMDSDKEMSAAVIEGNDAVTGHIISTTIGG
Sbjct: 1587 AEINEPQKLGPRRTSEMDSDKEMSAAVIEGNDAVTGHIISTTIGG 1721

HSP 2 
Score: 102.79 bits (218), Expect = 1.4714e-22
Identity = 44/45 (97.78%), Postives = 44/45 (97.78%), Query Frame = -2
Query:  295 PPMVVEMMCPVTASFPSITAADISLSESISDVRRGASFCGSLISA 429
            PPMVVEMMCPVTASFPSITAADISLSESISDVRRG SFCGSLISA
Sbjct: 1588 PPMVVEMMCPVTASFPSITAADISLSESISDVRRGPSFCGSLISA 1722

HSP 3 
Score: 81.2538 bits (171), Expect = 4.47356e-16
Identity = 33/35 (94.29%), Postives = 33/35 (94.29%), Query Frame = -1
Query:  326 ASNGG*NDVSSNCIIPLNYSSRHFLIRVHFRCAAR 430
            ASNGG NDVSSNCIIPLNYSS HFLIRVHFRCAAR
Sbjct: 1587 ASNGGRNDVSSNCIIPLNYSSGHFLIRVHFRCAAR 1691

HSP 4 
Score: 75.2971 bits (158), Expect = 2.77845e-14
Identity = 32/45 (71.11%), Postives = 33/45 (73.33%), Query Frame = -3
Query:  294 LQWWLK*CVXXXXXXXXXXXQTFPYQSPFQMCGEALASVAH*SLP 428
            LQWW K*CV           +TFPYQSPFQMCGEALASVAH*SLP
Sbjct: 1589 LQWWSK*CVQ*LHHSPQLQQRTFPYQSPFQMCGEALASVAH*SLP 1723

Blast Hits to Contigs V2 CCall

Analysis Date: 11-18-2009 (Blast: WO454_contigs_v2_vs_CCall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
CCall_contig24677_v21.34144e-2496.15%
CCall_contig24677_v2
HSP 1 
Score: 66.1329 bits (138), Expect = 1.34144e-24
Identity = 25/26 (96.15%), Postives = 25/26 (96.15%), Query Frame = 1
Query:   85 G*LFRSETERSVWDFFSFKNRHVCGY 162
            G LFRSETERSVWDFFSFKNRHVCGY
Sbjct:  425 GGLFRSETERSVWDFFSFKNRHVCGY 502

HSP 2 
Score: 62.9255 bits (131), Expect = 1.34144e-24
Identity = 25/31 (80.65%), Postives = 27/31 (87.10%), Query Frame = 3
Query:    3 LCVAALVVVWF*DWIGACVSFFAFKSLGVTF 95
            L VAALV+VWF*DWIGACVSFF F+SLG  F
Sbjct:  491 LSVAALVIVWF*DWIGACVSFFVFESLGGLF 583

HSP 3 
Score: 64.7583 bits (135), Expect = 1.20031e-23
Identity = 26/31 (83.87%), Postives = 26/31 (83.87%), Query Frame = -3
Query:    3 KSHPQRFKRKE*NTSTDPISEPNNNKSRHTE 95
            K  PQRFK KE NTSTDPISEPNNNKSRH E
Sbjct:  491 KKSPQRFKHKERNTSTDPISEPNNNKSRHRE 583

HSP 4 
Score: 61.0927 bits (127), Expect = 1.20031e-23
Identity = 25/28 (89.29%), Postives = 27/28 (96.43%), Query Frame = -2
Query:   79 VAANMAVLEGKKIPNGSLSFRSKKSPPK 162
            VAANMAVLEGKK+PNGSLSFRSKKSP +
Sbjct:  425 VAANMAVLEGKKVPNGSLSFRSKKSPQR 508

HSP 5 
Score: 60.1762 bits (125), Expect = 8.79214e-16
Identity = 25/27 (92.59%), Postives = 26/27 (96.30%), Query Frame = -1
Query:   80 SRKHGGS*RKKNPKRISQFQIEKVTPK 160
            SRKHGGS*RKK+PKRISQFQIEKV PK
Sbjct:  427 SRKHGGS*RKKSPKRISQFQIEKVPPK 507

HSP 6 
Score: 39.0986 bits (79), Expect = 8.79214e-16
Identity = 16/21 (76.19%), Postives = 16/21 (76.19%), Query Frame = -1
Query:   32 KVTPKDLNAKNETQAPIQSQN 94
            K  PKD N K ETQAPIQSQN
Sbjct:  492 KSPPKDSNTKKETQAPIQSQN 554

HSP 7 
Score: 69.7986 bits (146), Expect = 1.30412e-12
Identity = 30/44 (68.18%), Postives = 32/44 (72.73%), Query Frame = -2
Query:    1 KKIPNGSLSFRSKKSPPKI*TQRMKHKHRSNLRTKQQQEPPHRE 132
            KK P     F+ +K PPKI TQR KHKHRSNLRTKQ QEPP RE
Sbjct:  454 KKSPKRISQFQIEKVPPKIQTQRKKHKHRSNLRTKQ*QEPPQRE 585

HSP 8 
Score: 61.5509 bits (128), Expect = 2.07935e-12
Identity = 24/25 (96.00%), Postives = 24/25 (96.00%), Query Frame = 2
Query:   86 GDFFDLKLRDPFGIFFPSRTAMFAA 160
            GDFFDLKLRDPFG FFPSRTAMFAA
Sbjct:  427 GDFFDLKLRDPFGTFFPSRTAMFAA 501

HSP 9 
Score: 26.2688 bits (51), Expect = 2.07935e-12
Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = 2
Query:   59 FILCV*IFGGDF 94
            F LCV*IFGG F
Sbjct:  492 FFLCV*IFGGTF 527

CCall_contig30093_v28.09401e-2397.78%
CCall_contig30093_v2
HSP 1 
Score: 103.706 bits (220), Expect = 8.09401e-23
Identity = 44/45 (97.78%), Postives = 44/45 (97.78%), Query Frame = 2
Query:  296 AEINEPQKLAPRRTSEMDSDKEMSAAVIEGNDAVTGHIISTTIGG 430
            AEINEPQKL PRRTSEMDSDKEMSAAVIEGNDAVTGHIISTTIGG
Sbjct: 1587 AEINEPQKLGPRRTSEMDSDKEMSAAVIEGNDAVTGHIISTTIGG 1721

HSP 2 
Score: 102.79 bits (218), Expect = 1.52768e-22
Identity = 44/45 (97.78%), Postives = 44/45 (97.78%), Query Frame = -2
Query:  295 PPMVVEMMCPVTASFPSITAADISLSESISDVRRGASFCGSLISA 429
            PPMVVEMMCPVTASFPSITAADISLSESISDVRRG SFCGSLISA
Sbjct: 1588 PPMVVEMMCPVTASFPSITAADISLSESISDVRRGPSFCGSLISA 1722

HSP 3 
Score: 81.2538 bits (171), Expect = 4.64467e-16
Identity = 33/35 (94.29%), Postives = 33/35 (94.29%), Query Frame = -1
Query:  326 ASNGG*NDVSSNCIIPLNYSSRHFLIRVHFRCAAR 430
            ASNGG NDVSSNCIIPLNYSS HFLIRVHFRCAAR
Sbjct: 1587 ASNGGRNDVSSNCIIPLNYSSGHFLIRVHFRCAAR 1691

HSP 4 
Score: 75.2971 bits (158), Expect = 2.88472e-14
Identity = 32/45 (71.11%), Postives = 33/45 (73.33%), Query Frame = -3
Query:  294 LQWWLK*CVXXXXXXXXXXXQTFPYQSPFQMCGEALASVAH*SLP 428
            LQWW K*CV           +TFPYQSPFQMCGEALASVAH*SLP
Sbjct: 1589 LQWWSK*CVQ*LHHSPQLQQRTFPYQSPFQMCGEALASVAH*SLP 1723

Blast Hits to Contig V2 Oall

Analysis Date: 11-18-2009 (Blast: WO454_contigs_v2_vs_Oall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
Oall_contig589_v28.36048e-58100.00%
Oall_contig589_v2
HSP 1 
Score: 133.948 bits (286), Expect = 8.36048e-58
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 1
Query:    1 LSVWRLLLLFGSEIGSVLVFHSLRLNLWG*LFRSETERSVWDFFSFKNRHVCGY 162
            LSVWRLLLLFGSEIGSVLVFHSLRLNLWG*LFRSETERSVWDFFSFKNRHVCGY
Sbjct:  269 LSVWRLLLLFGSEIGSVLVFHSLRLNLWG*LFRSETERSVWDFFSFKNRHVCGY 430

HSP 2 
Score: 105.539 bits (224), Expect = 8.36048e-58
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 2
Query:  296 AEINEPQKLAPRRTSEMDSDKEMSAAVIEGNDAVTGHIISTTIGG 430
            AEINEPQKLAPRRTSEMDSDKEMSAAVIEGNDAVTGHIISTTIGG
Sbjct:    1 AEINEPQKLAPRRTSEMDSDKEMSAAVIEGNDAVTGHIISTTIGG 135

HSP 3 
Score: 129.366 bits (276), Expect = 2.68606e-56
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = -2
Query:    1 VAANMAVLEGKKIPNGSLSFRSKKSPPKI*TQRMKHKHRSNLRTKQQQEPPHRE 162
            VAANMAVLEGKKIPNGSLSFRSKKSPPKI*TQRMKHKHRSNLRTKQQQEPPHRE
Sbjct:  269 VAANMAVLEGKKIPNGSLSFRSKKSPPKI*TQRMKHKHRSNLRTKQQQEPPHRE 430

HSP 4 
Score: 105.081 bits (223), Expect = 2.68606e-56
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = -2
Query:  295 PPMVVEMMCPVTASFPSITAADISLSESISDVRRGASFCGSLISA 429
            PPMVVEMMCPVTASFPSITAADISLSESISDVRRGASFCGSLISA
Sbjct:    2 PPMVVEMMCPVTASFPSITAADISLSESISDVRRGASFCGSLISA 136

HSP 5 
Score: 128.908 bits (275), Expect = 1.6672e-51
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = -3
Query:    3 *PQTWRFLKEKKSQTDLSVSDRKSHPQRFKRKE*NTSTDPISEPNNNKSRHTE 161
            *PQTWRFLKEKKSQTDLSVSDRKSHPQRFKRKE*NTSTDPISEPNNNKSRHTE
Sbjct:  270 *PQTWRFLKEKKSQTDLSVSDRKSHPQRFKRKE*NTSTDPISEPNNNKSRHTE 428

HSP 6 
Score: 89.5016 bits (189), Expect = 1.6672e-51
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = -1
Query:  320 ASNGG*NDVSSNCIIPLNYSSRHFLIRVHFRCAARR* 430
            ASNGG*NDVSSNCIIPLNYSSRHFLIRVHFRCAARR*
Sbjct:    1 ASNGG*NDVSSNCIIPLNYSSRHFLIRVHFRCAARR* 111

HSP 7 
Score: 121.118 bits (258), Expect = 9.7923e-44
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 3
Query:    3 LCVAALVVVWF*DWIGACVSFFAFKSLGVTFSI*N*EIRLGFFFLQEPPC 152
            LCVAALVVVWF*DWIGACVSFFAFKSLGVTFSI*N*EIRLGFFFLQEPPC
Sbjct:  279 LCVAALVVVWF*DWIGACVSFFAFKSLGVTFSI*N*EIRLGFFFLQEPPC 428

HSP 8 
Score: 54.2195 bits (112), Expect = 9.7923e-44
Identity = 24/36 (66.67%), Postives = 24/36 (66.67%), Query Frame = 3
Query:  321 *RLAAHLKWTLIRKCXXXXXXXXXXXXDTSFQPPLE 428
            *RLAAHLKWTLIRKC            DTSFQPPLE
Sbjct:    3 *RLAAHLKWTLIRKCLLL*LRGMMQLLDTSFQPPLE 110

HSP 9 
Score: 34.5166 bits (69), Expect = 9.7923e-44
Identity = 16/16 (100.00%), Postives = 16/16 (100.00%), Query Frame = 1
Query:  295 GRD**ATEASASPHI* 342
            GRD**ATEASASPHI*
Sbjct:   89 GRD**ATEASASPHI* 136

HSP 10 
Score: 102.331 bits (217), Expect = 3.75572e-40
Identity = 43/43 (100.00%), Postives = 43/43 (100.00%), Query Frame = -1
Query:   32 SRKHGGS*RKKNPKRISQFQIEKVTPKDLNAKNETQAPIQSQN 160
            SRKHGGS*RKKNPKRISQFQIEKVTPKDLNAKNETQAPIQSQN
Sbjct:  271 SRKHGGS*RKKNPKRISQFQIEKVTPKDLNAKNETQAPIQSQN 399

HSP 11 
Score: 78.0464 bits (164), Expect = 3.75572e-40
Identity = 34/45 (75.56%), Postives = 34/45 (75.56%), Query Frame = -3
Query:  294 LQWWLK*CVXXXXXXXXXXXQTFPYQSPFQMCGEALASVAH*SLP 428
            LQWWLK*CV           QTFPYQSPFQMCGEALASVAH*SLP
Sbjct:    3 LQWWLK*CVQ*LHHSPQLQQQTFPYQSPFQMCGEALASVAH*SLP 137

HSP 12 
Score: 84.0031 bits (177), Expect = 3.36652e-24
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 2
Query:   59 FILCV*IFGGDFFDLKLRDPFGIFFPSRTAMFAA 160
            FILCV*IFGGDFFDLKLRDPFGIFFPSRTAMFAA
Sbjct:  271 FILCV*IFGGDFFDLKLRDPFGIFFPSRTAMFAA 372

HSP 13 
Score: 42.7643 bits (87), Expect = 3.36652e-24
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1
Query:  394 SYWTHHFNHHWR 429
            SYWTHHFNHHWR
Sbjct:    2 SYWTHHFNHHWR 37

Oall_contig588_v21.9408e-2896.15%
Oall_contig588_v2
HSP 1 
Score: 122.034 bits (260), Expect = 1.9408e-28
Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 1
Query:    1 LSVWRLLLLFGSEIGSVLVFHSLRLNLWG*LFRSETERSVWDFFSFKNRHVC 156
            L VWRLLLLFGSEIGSVLVFHSLRLNLWG*L RSETERSVWDFFSFKNRHVC
Sbjct:   60 LCVWRLLLLFGSEIGSVLVFHSLRLNLWG*LSRSETERSVWDFFSFKNRHVC 215

HSP 2 
Score: 122.034 bits (260), Expect = 1.9408e-28
Identity = 49/51 (96.08%), Postives = 51/51 (100.00%), Query Frame = -3
Query:    3 QTWRFLKEKKSQTDLSVSDRKSHPQRFKRKE*NTSTDPISEPNNNKSRHTE 155
            QTWRFLKEKKSQTDLSVSDR+SHPQRFKRKE*NTSTDPISEPNNNKSRHT+
Sbjct:   61 QTWRFLKEKKSQTDLSVSDRESHPQRFKRKE*NTSTDPISEPNNNKSRHTQ 213

HSP 3 
Score: 121.118 bits (258), Expect = 3.66311e-28
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 3
Query:    3 LCVAALVVVWF*DWIGACVSFFAFKSLGVTFSI*N*EIRLGFFFLQEPPC 152
            LCVAALVVVWF*DWIGACVSFFAFKSLGVTFSI*N*EIRLGFFFLQEPPC
Sbjct:   64 LCVAALVVVWF*DWIGACVSFFAFKSLGVTFSI*N*EIRLGFFFLQEPPC 213

HSP 4 
Score: 119.743 bits (255), Expect = 9.49846e-28
Identity = 49/51 (96.08%), Postives = 50/51 (98.04%), Query Frame = -2
Query:    1 NMAVLEGKKIPNGSLSFRSKKSPPKI*TQRMKHKHRSNLRTKQQQEPPHRE 153
            NMAVLEGKKIPNGSLSFRS+KSPPKI*TQRMKHKHRSNLRTKQQQEPPH E
Sbjct:   63 NMAVLEGKKIPNGSLSFRSRKSPPKI*TQRMKHKHRSNLRTKQQQEPPHTE 215

HSP 5 
Score: 98.2075 bits (208), Expect = 2.88785e-21
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = -1
Query:   32 KHGGS*RKKNPKRISQFQIEKVTPKDLNAKNETQAPIQSQN 154
            KHGGS*RKKNPKRISQFQIEKVTPKDLNAKNETQAPIQSQN
Sbjct:   62 KHGGS*RKKNPKRISQFQIEKVTPKDLNAKNETQAPIQSQN 184

HSP 6 
Score: 77.5882 bits (163), Expect = 4.65188e-15
Identity = 31/32 (96.88%), Postives = 31/32 (96.88%), Query Frame = 2
Query:   59 FILCV*IFGGDFFDLKLRDPFGIFFPSRTAMF 154
            FILCV*IFGGDF DLKLRDPFGIFFPSRTAMF
Sbjct:   62 FILCV*IFGGDFLDLKLRDPFGIFFPSRTAMF 157

Oall_contig7004_v21.7756e-23100.00%
Oall_contig7004_v2
HSP 1 
Score: 105.539 bits (224), Expect = 1.7756e-23
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 2
Query:  296 AEINEPQKLAPRRTSEMDSDKEMSAAVIEGNDAVTGHIISTTIGG 430
            AEINEPQKLAPRRTSEMDSDKEMSAAVIEGNDAVTGHIISTTIGG
Sbjct:  467 AEINEPQKLAPRRTSEMDSDKEMSAAVIEGNDAVTGHIISTTIGG 601

HSP 2 
Score: 105.081 bits (223), Expect = 2.43938e-23
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = -2
Query:  295 PPMVVEMMCPVTASFPSITAADISLSESISDVRRGASFCGSLISA 429
            PPMVVEMMCPVTASFPSITAADISLSESISDVRRGASFCGSLISA
Sbjct:  466 PPMVVEMMCPVTASFPSITAADISLSESISDVRRGASFCGSLISA 600

HSP 3 
Score: 86.2941 bits (182), Expect = 1.10305e-17
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = -1
Query:  320 ASNGG*NDVSSNCIIPLNYSSRHFLIRVHFRCAARR* 430
            ASNGG*NDVSSNCIIPLNYSS HFLIRVHFRCAARR*
Sbjct:  491 ASNGG*NDVSSNCIIPLNYSSGHFLIRVHFRCAARR* 601

HSP 4 
Score: 75.2971 bits (158), Expect = 2.25435e-14
Identity = 32/45 (71.11%), Postives = 33/45 (73.33%), Query Frame = -3
Query:  294 LQWWLK*CVXXXXXXXXXXXQTFPYQSPFQMCGEALASVAH*SLP 428
            LQWWLK*CV           +TFPYQSPFQMCGEALA VAH*SLP
Sbjct:  465 LQWWLK*CVQ*LHHSPQLQQRTFPYQSPFQMCGEALAFVAH*SLP 599

HSP 5 
Score: 54.2195 bits (112), Expect = 2.93324e-12
Identity = 24/36 (66.67%), Postives = 24/36 (66.67%), Query Frame = 3
Query:  321 *RLAAHLKWTLIRKCXXXXXXXXXXXXDTSFQPPLE 428
            *RLAAHLKWTLIRKC            DTSFQPPLE
Sbjct:  492 *RLAAHLKWTLIRKCPLL*LRGMMQLLDTSFQPPLE 599

HSP 6 
Score: 32.6837 bits (65), Expect = 2.93324e-12
Identity = 15/16 (93.75%), Postives = 16/16 (100.00%), Query Frame = 1
Query:  295 GRD**ATEASASPHI* 342
            GRD**AT+ASASPHI*
Sbjct:  466 GRD**ATKASASPHI* 513

Oall_contig6019_v21.7756e-23100.00%
Oall_contig6019_v2
HSP 1 
Score: 105.539 bits (224), Expect = 1.7756e-23
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 2
Query:  296 AEINEPQKLAPRRTSEMDSDKEMSAAVIEGNDAVTGHIISTTIGG 430
            AEINEPQKLAPRRTSEMDSDKEMSAAVIEGNDAVTGHIISTTIGG
Sbjct:   89 AEINEPQKLAPRRTSEMDSDKEMSAAVIEGNDAVTGHIISTTIGG 223

HSP 2 
Score: 105.081 bits (223), Expect = 2.46353e-23
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = -2
Query:  295 PPMVVEMMCPVTASFPSITAADISLSESISDVRRGASFCGSLISA 429
            PPMVVEMMCPVTASFPSITAADISLSESISDVRRGASFCGSLISA
Sbjct:   88 PPMVVEMMCPVTASFPSITAADISLSESISDVRRGASFCGSLISA 222

HSP 3 
Score: 89.5016 bits (189), Expect = 1.20595e-18
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = -1
Query:  320 ASNGG*NDVSSNCIIPLNYSSRHFLIRVHFRCAARR* 430
            ASNGG*NDVSSNCIIPLNYSSRHFLIRVHFRCAARR*
Sbjct:  113 ASNGG*NDVSSNCIIPLNYSSRHFLIRVHFRCAARR* 223

HSP 4 
Score: 78.0464 bits (164), Expect = 3.38605e-15
Identity = 34/45 (75.56%), Postives = 34/45 (75.56%), Query Frame = -3
Query:  294 LQWWLK*CVXXXXXXXXXXXQTFPYQSPFQMCGEALASVAH*SLP 428
            LQWWLK*CV           QTFPYQSPFQMCGEALASVAH*SLP
Sbjct:   87 LQWWLK*CVQ*LHHSPQLQQQTFPYQSPFQMCGEALASVAH*SLP 221

HSP 5 
Score: 54.2195 bits (112), Expect = 8.7475e-13
Identity = 24/36 (66.67%), Postives = 24/36 (66.67%), Query Frame = 3
Query:  321 *RLAAHLKWTLIRKCXXXXXXXXXXXXDTSFQPPLE 428
            *RLAAHLKWTLIRKC            DTSFQPPLE
Sbjct:  114 *RLAAHLKWTLIRKCLLL*LRGMMQLLDTSFQPPLE 221

HSP 6 
Score: 34.5166 bits (69), Expect = 8.7475e-13
Identity = 16/16 (100.00%), Postives = 16/16 (100.00%), Query Frame = 1
Query:  295 GRD**ATEASASPHI* 342
            GRD**ATEASASPHI*
Sbjct:   88 GRD**ATEASASPHI* 135

Oall_contig33414_v26.81105e-20100.00%
Oall_contig33414_v2
HSP 1 
Score: 65.2165 bits (136), Expect = 6.81105e-20
Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 1
Query:   91 LFRSETERSVWDFFSFKNRHVCGY 162
            LFRSETERSVWDFFSFKNRHVCGY
Sbjct:  130 LFRSETERSVWDFFSFKNRHVCGY 201

HSP 2 
Score: 42.3061 bits (86), Expect = 6.81105e-20
Identity = 15/24 (62.50%), Postives = 18/24 (75.00%), Query Frame = 3
Query:   18 LVVVWF*DWIGACVSFFAFKSLGV 89
            L + W *DWIGACVSFFA +S  +
Sbjct:   69 LFLFWL*DWIGACVSFFAXESFSI 140

HSP 3 
Score: 22.6031 bits (43), Expect = 6.81105e-20
Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 1
Query:    1 LSVWRLLLLF 30
            LS+WRLL LF
Sbjct:   51 LSLWRLLFLF 80

HSP 4 
Score: 58.3434 bits (121), Expect = 3.22563e-15
Identity = 23/23 (100.00%), Postives = 23/23 (100.00%), Query Frame = 2
Query:   92 FFDLKLRDPFGIFFPSRTAMFAA 160
            FFDLKLRDPFGIFFPSRTAMFAA
Sbjct:  131 FFDLKLRDPFGIFFPSRTAMFAA 199

HSP 5 
Score: 38.6404 bits (78), Expect = 3.22563e-15
Identity = 17/19 (89.47%), Postives = 18/19 (94.74%), Query Frame = 1
Query:   28 FGSEIGSVLVFHSLRLNLW 84
            FGSEIGSVLVF SLRLNL+
Sbjct:   79 FGSEIGSVLVFLSLRLNLF 135

Blast Hits to Contig V2 RO454

Analysis Date: 11-18-2009 (Blast: WO454_contigs_v2_vs_RO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
RO454_contig25620_v21.07438e-23100.00%
RO454_contig25620_v2
HSP 1 
Score: 105.539 bits (224), Expect = 1.07438e-23
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 2
Query:  296 AEINEPQKLAPRRTSEMDSDKEMSAAVIEGNDAVTGHIISTTIGG 430
            AEINEPQKLAPRRTSEMDSDKEMSAAVIEGNDAVTGHIISTTIGG
Sbjct:  415 AEINEPQKLAPRRTSEMDSDKEMSAAVIEGNDAVTGHIISTTIGG 549

HSP 2 
Score: 105.081 bits (223), Expect = 1.49049e-23
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = -2
Query:  295 PPMVVEMMCPVTASFPSITAADISLSESISDVRRGASFCGSLISA 429
            PPMVVEMMCPVTASFPSITAADISLSESISDVRRGASFCGSLISA
Sbjct:  416 PPMVVEMMCPVTASFPSITAADISLSESISDVRRGASFCGSLISA 550

HSP 3 
Score: 86.2941 bits (182), Expect = 6.73977e-18
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = -1
Query:  320 ASNGG*NDVSSNCIIPLNYSSRHFLIRVHFRCAARR* 430
            ASNGG*NDVSSNCIIPLNYSS HFLIRVHFRCAARR*
Sbjct:  415 ASNGG*NDVSSNCIIPLNYSSGHFLIRVHFRCAARR* 525

HSP 4 
Score: 75.2971 bits (158), Expect = 1.37744e-14
Identity = 32/45 (71.11%), Postives = 33/45 (73.33%), Query Frame = -3
Query:  294 LQWWLK*CVXXXXXXXXXXXQTFPYQSPFQMCGEALASVAH*SLP 428
            LQWWLK*CV           +TFPYQSPFQMCGEALA VAH*SLP
Sbjct:  417 LQWWLK*CVQ*LHHSPQLQQRTFPYQSPFQMCGEALAFVAH*SLP 551

HSP 5 
Score: 54.2195 bits (112), Expect = 1.81671e-12
Identity = 24/36 (66.67%), Postives = 24/36 (66.67%), Query Frame = 3
Query:  321 *RLAAHLKWTLIRKCXXXXXXXXXXXXDTSFQPPLE 428
            *RLAAHLKWTLIRKC            DTSFQPPLE
Sbjct:  417 *RLAAHLKWTLIRKCPLL*LRGMMQLLDTSFQPPLE 524

HSP 6 
Score: 32.6837 bits (65), Expect = 1.81671e-12
Identity = 15/16 (93.75%), Postives = 16/16 (100.00%), Query Frame = 1
Query:  295 GRD**ATEASASPHI* 342
            GRD**AT+ASASPHI*
Sbjct:  503 GRD**ATKASASPHI* 550

RO454_contig24515_v24.09857e-20100.00%
RO454_contig24515_v2
HSP 1 
Score: 65.2165 bits (136), Expect = 4.09857e-20
Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 1
Query:   91 LFRSETERSVWDFFSFKNRHVCGY 162
            LFRSETERSVWDFFSFKNRHVCGY
Sbjct:  130 LFRSETERSVWDFFSFKNRHVCGY 201

HSP 2 
Score: 42.3061 bits (86), Expect = 4.09857e-20
Identity = 15/24 (62.50%), Postives = 18/24 (75.00%), Query Frame = 3
Query:   18 LVVVWF*DWIGACVSFFAFKSLGV 89
            L + W *DWIGACVSFFA +S  +
Sbjct:   69 LFLFWL*DWIGACVSFFAXESFSI 140

HSP 3 
Score: 22.6031 bits (43), Expect = 4.09857e-20
Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 1
Query:    1 LSVWRLLLLF 30
            LS+WRLL LF
Sbjct:   51 LSLWRLLFLF 80

HSP 4 
Score: 58.3434 bits (121), Expect = 1.94475e-15
Identity = 23/23 (100.00%), Postives = 23/23 (100.00%), Query Frame = 2
Query:   92 FFDLKLRDPFGIFFPSRTAMFAA 160
            FFDLKLRDPFGIFFPSRTAMFAA
Sbjct:  131 FFDLKLRDPFGIFFPSRTAMFAA 199

HSP 5 
Score: 38.6404 bits (78), Expect = 1.94475e-15
Identity = 17/19 (89.47%), Postives = 18/19 (94.74%), Query Frame = 1
Query:   28 FGSEIGSVLVFHSLRLNLW 84
            FGSEIGSVLVF SLRLNL+
Sbjct:   79 FGSEIGSVLVFLSLRLNLF 135

Blast Hits to TAIR7 Peptides

Analysis Date: 11-18-2009 (Blast: WO454_contigs_v2_vs_TAIR7_pep_20070425)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
AT1G06390.2 4.45278e-1166.67%
GSK1 (GSK3/SHAGGY-LIKE PROTEIN KINASE 1); kinase | chr1:1946859-1950416 FORWARD
HSP 1 
Score: 63.5438 bits (153), Expect = 4.45278e-11
Identity = 34/51 (66.67%), Postives = 37/51 (72.55%), Query Frame = 2
Query:  308 EPQKLAP----------RRTSEMDSDKEMSAAVIEGNDAVTGHIISTTIGG 430
            +P  LAP          +R  E+DSDKEMSAAVIEGNDAVTGHIISTTIGG
Sbjct:    9 QPHALAPPLQLHDGDALKRRPELDSDKEMSAAVIEGNDAVTGHIISTTIGG 59

AT1G06390.1 4.45278e-1166.67%
GSK1 (GSK3/SHAGGY-LIKE PROTEIN KINASE 1); kinase | chr1:1946859-1950416 FORWARD
HSP 1 
Score: 63.5438 bits (153), Expect = 4.45278e-11
Identity = 34/51 (66.67%), Postives = 37/51 (72.55%), Query Frame = 2
Query:  308 EPQKLAP----------RRTSEMDSDKEMSAAVIEGNDAVTGHIISTTIGG 430
            +P  LAP          +R  E+DSDKEMSAAVIEGNDAVTGHIISTTIGG
Sbjct:    9 QPHALAPPLQLHDGDALKRRPELDSDKEMSAAVIEGNDAVTGHIISTTIGG 59

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