Fagaceae Genomics Web

WO454_contig247_v2

Name	WO454_contig247_v2
Accession	ID3257866
Sequence	GTGCCTTTCACTTTGAAAAAAAATTCTGGGTTTTTGTTTTTTCCGGCAAC CCGGGTCAGAATCCAGTGAAATTGGCAGAAATCCCAGCAACCCATTTCGG ATTTGGAGCCACTCGGATCAAATCTGGACAtTTTTTTTgGGaAAAAAAAT CCAACATTTACATTTTTTGACGTTGTTTAAGATaAAACCCACAAGACAAG TTTTTGAGTTTATGAGTGACCGTGATGAAATAGAAATGGTTTCTGTAGAA TTGTAATGGGAAGATGAAATGCAAATCTGGATTGTGCTTGTGGTTGAGAC TCATGGGGATTTGTTTTAGTATTGAAGAGCAAG
Length	333
Type	contig
Organism	White Oak

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References

Dababase	Accession
GFF_source	SeqManPro

ESTs in this contig

Type	Feature	Position
EST	WOA_126385_0730_3469	0-300
EST	WOB_031313_2787_1147	59-333

InterProScan Analysis

Analysis Date: 11-18-2009 (Interpro: WO454_contigs_v2)

SEQUENCE: WO454_contig247_v2_2_ORF2 CRC64: 335A9550CBED0FDF LENGTH: 79 aa
No hits reported.

SEQUENCE: WO454_contig247_v2_3_ORF1 CRC64: AB79EC9922C59D04 LENGTH: 55 aa
No hits reported.

SEQUENCE: WO454_contig247_v2_4_ORF2 CRC64: 8C912676D5E88B7D LENGTH: 60 aa

noIPR
unintegrated

unintegrated
seg		seg

SEQUENCE: WO454_contig247_v2_5_ORF1 CRC64: 191571FB5927B15A LENGTH: 57 aa
No hits reported.

SEQUENCE: WO454_contig247_v2_6_ORF2 CRC64: 08BF14D1755870C2 LENGTH: 59 aa
No hits reported.

SEQUENCE: WO454_contig247_v2_2_ORF2 CRC64: 335A9550CBED0FDF LENGTH: 79 aa
No hits reported.

SEQUENCE: WO454_contig247_v2_3_ORF1 CRC64: AB79EC9922C59D04 LENGTH: 55 aa
No hits reported.

SEQUENCE: WO454_contig247_v2_4_ORF2 CRC64: 8C912676D5E88B7D LENGTH: 60 aa

noIPR
unintegrated

unintegrated

SEG

seg

seg

NA [2-14]?

Parent

no parent

Children

no children

Found in

no entries

Contains

no entries

GO terms

none

SEQUENCE: WO454_contig247_v2_5_ORF1 CRC64: 191571FB5927B15A LENGTH: 57 aa
No hits reported.

SEQUENCE: WO454_contig247_v2_6_ORF2 CRC64: 08BF14D1755870C2 LENGTH: 59 aa
No hits reported.

Blast Hits to Contigs V2 CC454

Analysis Date: 11-18-2009 (Blast: WO454_contigs_v2_vs_CC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.

Match Name	E value	Identity
CC454_contig945_v2	1.16998e-34	85.42%
CC454_contig945_v2
HSP 1 Score: 101.873 bits (216), Expect = 1.16998e-34 Identity = 41/48 (85.42%), Postives = 44/48 (91.67%), Query Frame = -1 Query: 1 FPKKNVQISEWLQIRNGLLGFLPISLDSDPGCRKKQKPRIFFQSERH 144 F +KN+QISEWLQIRNGL GFLPIS DSDPGCRKKQKPR FFQS+RH Sbjct: 91 FFQKNIQISEWLQIRNGLPGFLPISPDSDPGCRKKQKPRFFFQSKRH 234 HSP 2* Score: 40.9315 bits (83), Expect = 1.16998e-34 Identity = 15/23 (65.22%), Postives = 16/23 (69.57%), Query Frame = -1 Query: 136 KTCLVGFILNNVKKCKCWIFFPK 204 K GFI NVKKC+CWIFF K Sbjct: 223 KNLSCGFISYNVKKCQCWIFFQK 291 HSP 3 Score: 34.0583 bits (68), Expect = 1.16998e-34 Identity = 13/15 (86.67%), Postives = 13/15 (86.67%), Query Frame = -3 Query: 185 FITVTHKLKNLSCGF 229 F VTHKLKNLSCGF Sbjct: 271 FHQVTHKLKNLSCGF 315 HSP 4 Score: 102.331 bits (217), Expect = 5.87065e-32 Identity = 40/48 (83.33%), Postives = 40/48 (83.33%), Query Frame = 2 Query: 2 CLSLKKILGFCFFRQPGSESSEIGRNPSNPFRIWSHSDQIWTFFLGK 145 CL L KK LGFCFFRQPGSES EIGRNP NPFRIWSHSDQIW FF K Sbjct: 92 CLLLXKKNLGFCFFRQPGSESGEIGRNPGNPFRIWSHSDQIWIFFWKK 235 HSP 5* Score: 35.433 bits (71), Expect = 5.87065e-32 Identity = 15/23 (65.22%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 136 FGKKNPTFTFFDVVDKTHKTSF 204 F +KNPT TFFDVVDK + F Sbjct: 223 FLEKNPTLTFFDVVDKPTRQVF 291 HSP 6* Score: 29.9345 bits (59), Expect = 5.87065e-32 Identity = 11/12 (91.67%), Postives = 12/12 (100.00%), Query Frame = 2 Query: 185 KPTRQVFEFMSD 220 KPTRQVF+FMSD Sbjct: 271 KPTRQVFKFMSD 306 HSP 7 Score: 97.2911 bits (206), Expect = 4.53515e-30 Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = 3 Query: 3 AFHFEKKFWVFVFSGNPGQNPVKLAEIPATHFGFGATRIKSGHFFWEKKS 152 AF+F KK WVFVFSGN QNPVKLAEIPAT FGFGATRIKSG+FF +K + Sbjct: 93 AFYFXKKIWVFVFSGNLDQNPVKLAEIPATRFGFGATRIKSGYFFGKKSN 242 HSP 8 Score: 34.5166 bits (69), Expect = 4.53515e-30 Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 2 Query: 134 FLGKKIQHLHFLTLFKIKP 190 F KKIQH HFLTL++I P Sbjct: 221 FFWKKIQHHFLTLYEINP 277 HSP 9* Score: 29.4763 bits (58), Expect = 4.53515e-30 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1 Query: 187 THKTSFVYEP 222 THKTSFVYEP Sbjct: 273 THKTSFVYEP 308 HSP 10 Score: 96.8329 bits (205), Expect = 2.13948e-29 Identity = 39/48 (81.25%), Postives = 43/48 (89.58%), Query Frame = 1 Query: 1 VPFTLKKNSGFLFFPATRVRIQNWQKSQQPISDLEPLGSNLDIFFGK 144 VPFTL K SGFLFFPAT +RI+NWQKS+QP+SDLEPLGSNLDIF K Sbjct: 91 VPFTLXKKSGFLFFPATWIRIRNWQKSRQPVSDLEPLGSNLDIFLEK 234 HSP 11* Score: 33.1419 bits (66), Expect = 2.13948e-29 Identity = 14/24 (58.33%), Postives = 18/24 (75.00%), Query Frame = 3 Query: 132 FFWEKKSNIYIFRCLRNPQDKF 203 +F+ KKSNI IFRC+R + F Sbjct: 219 YFFGKKSNIDIFRCMRTHKTSF 290 HSP 12 Score: 29.0181 bits (57), Expect = 2.13948e-29 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 3 Query: 186 NPQDKFLSLVT 221 NPQDKFLSLVT Sbjct: 272 NPQDKFLSLVT 307 HSP 13* Score: 99.124 bits (210), Expect = 6.26954e-26 Identity = 39/48 (81.25%), Postives = 42/48 (87.50%), Query Frame = -2 Query: 3 FFPKKMSRFDPSGSKSEMGCWDFCQFHWILTRVAGKNKNPEFFFKVKG 146 FF KK+SRFDPSGSKSE GC DFCQFH IL +VAGKNKNP+FF KVKG Sbjct: 93 FFSKKISRFDPSGSKSETGCRDFCQFHRILIQVAGKNKNPDFFXKVKG 236 HSP 14 Score: 32.2255 bits (64), Expect = 6.26954e-26 Identity = 16/23 (69.57%), Postives = 16/23 (69.57%), Query Frame = -2 Query: 135 KLVLWVLSTTSKNVNVGFFFPK 203 K L LS TTSKNVNVGFF K Sbjct: 222 KTCLVGLSHTTSKNVNVGFFSKK 290 HSP 15* Score: 87.2105 bits (184), Expect = 5.49231e-22 Identity = 40/48 (83.33%), Postives = 40/48 (83.33%), Query Frame = -3 Query: 2 FSQKKCPDLIRVAPNPKWVAGISANFTGFPGLPEKTKTQNFFSKKA 145 F KK PDLIRVAPNPK VAGISANFTGF* LPEKTKTQ FF KKA Sbjct: 92 FFPKKYPDLIRVAPNPKRVAGISANFTGFSRLPEKTKTQIFFXKKA 235 HSP 16* Score: 30.8509 bits (61), Expect = 5.49231e-22 Identity = 13/17 (76.47%), Postives = 14/17 (82.35%), Query Frame = -3 Query: 134 YLKQRQKM*MLDFFSQK 184 YL QRQKM MLDFF +K Sbjct: 221 YLIQRQKMSMLDFFPKK 271

Match Name

E value

Identity

CC454_contig945_v2

1.16998e-34

85.42%

CC454_contig945_v2

HSP 1

Score: 101.873 bits (216), Expect = 1.16998e-34
Identity = 41/48 (85.42%), Postives = 44/48 (91.67%), Query Frame = -1

Query:    1 FPKKNVQI*SEWLQIRNGLLGFLPISLDSDPGCRKKQKPRIFFQSERH 144
            F +KN+QI*SEWLQIRNGL GFLPIS DSDPGCRKKQKPR FFQS+RH
Sbjct:   91 FFQKNIQI*SEWLQIRNGLPGFLPISPDSDPGCRKKQKPRFFFQSKRH 234

HSP 2

Score: 40.9315 bits (83), Expect = 1.16998e-34
Identity = 15/23 (65.22%), Postives = 16/23 (69.57%), Query Frame = -1

Query:  136 KTCLVGFILNNVKKCKCWIFFPK 204
            K    GFI  NVKKC+CWIFF K
Sbjct:  223 KNLSCGFISYNVKKCQCWIFFQK 291

HSP 3

Score: 34.0583 bits (68), Expect = 1.16998e-34
Identity = 13/15 (86.67%), Postives = 13/15 (86.67%), Query Frame = -3

Query:  185 FITVTHKLKNLSCGF 229
            F  VTHKLKNLSCGF
Sbjct:  271 FHQVTHKLKNLSCGF 315

HSP 4

Score: 102.331 bits (217), Expect = 5.87065e-32
Identity = 40/48 (83.33%), Postives = 40/48 (83.33%), Query Frame = 2

Query:    2 CLSL*KKILGFCFFRQPGSESSEIGRNPSNPFRIWSHSDQIWTFFLGK 145
            CL L KK LGFCFFRQPGSES EIGRNP NPFRIWSHSDQIW FF  K
Sbjct:   92 CLLLXKKNLGFCFFRQPGSESGEIGRNPGNPFRIWSHSDQIWIFFWKK 235

HSP 5

Score: 35.433 bits (71), Expect = 5.87065e-32
Identity = 15/23 (65.22%), Postives = 17/23 (73.91%), Query Frame = 1

Query:  136 FGKKNPTFTFFDVV*DKTHKTSF 204
            F +KNPT TFFDVV*DK  +  F
Sbjct:  223 FLEKNPTLTFFDVV*DKPTRQVF 291

HSP 6

Score: 29.9345 bits (59), Expect = 5.87065e-32
Identity = 11/12 (91.67%), Postives = 12/12 (100.00%), Query Frame = 2

Query:  185 KPTRQVFEFMSD 220
            KPTRQVF+FMSD
Sbjct:  271 KPTRQVFKFMSD 306

HSP 7

Score: 97.2911 bits (206), Expect = 4.53515e-30
Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = 3

Query:    3 AFHFEKKFWVFVFSGNPGQNPVKLAEIPATHFGFGATRIKSGHFFWEKKS 152
            AF+F KK WVFVFSGN  QNPVKLAEIPAT FGFGATRIKSG+FF +K +
Sbjct:   93 AFYFXKKIWVFVFSGNLDQNPVKLAEIPATRFGFGATRIKSGYFFGKKSN 242

HSP 8

Score: 34.5166 bits (69), Expect = 4.53515e-30
Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 2

Query:  134 FLGKKIQHLHFLTLFKIKP 190
            F  KKIQH HFLTL++I P
Sbjct:  221 FFWKKIQH*HFLTLYEINP 277

HSP 9

Score: 29.4763 bits (58), Expect = 4.53515e-30
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1

Query:  187 THKTSF*VYE*P 222
            THKTSF*VYE*P
Sbjct:  273 THKTSF*VYE*P 308

HSP 10

Score: 96.8329 bits (205), Expect = 2.13948e-29
Identity = 39/48 (81.25%), Postives = 43/48 (89.58%), Query Frame = 1

Query:    1 VPFTLKKNSGFLFFPATRVRIQ*NWQKSQQPISDLEPLGSNLDIFFGK 144
            VPFTL K SGFLFFPAT +RI+*NWQKS+QP+SDLEPLGSNLDIF  K
Sbjct:   91 VPFTLXKKSGFLFFPATWIRIR*NWQKSRQPVSDLEPLGSNLDIFLEK 234

HSP 11

Score: 33.1419 bits (66), Expect = 2.13948e-29
Identity = 14/24 (58.33%), Postives = 18/24 (75.00%), Query Frame = 3

Query:  132 FFWEKKSNIYIF*RCLR*NPQDKF 203
            +F+ KKSNI IF*RC+R*  +  F
Sbjct:  219 YFFGKKSNIDIF*RCMR*THKTSF 290

HSP 12

Score: 29.0181 bits (57), Expect = 2.13948e-29
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 3

Query:  186 NPQDKFLSL*VT 221
            NPQDKFLSL*VT
Sbjct:  272 NPQDKFLSL*VT 307

HSP 13

Score: 99.124 bits (210), Expect = 6.26954e-26
Identity = 39/48 (81.25%), Postives = 42/48 (87.50%), Query Frame = -2

Query:    3 FFPKKMSRFDPSGSKSEMGCWDFCQFHWILTRVAGKNKNPEFFFKVKG 146
            FF KK+SRFDPSGSKSE GC DFCQFH IL +VAGKNKNP+FF KVKG
Sbjct:   93 FFSKKISRFDPSGSKSETGCRDFCQFHRILIQVAGKNKNPDFFXKVKG 236

HSP 14

Score: 32.2255 bits (64), Expect = 6.26954e-26
Identity = 16/23 (69.57%), Postives = 16/23 (69.57%), Query Frame = -2

Query:  135 KLVLWVLS*TTSKNVNVGFFFPK 203
            K  L  LS TTSKNVNVGFF  K
Sbjct:  222 KTCLVGLSHTTSKNVNVGFFSKK 290

HSP 15

Score: 87.2105 bits (184), Expect = 5.49231e-22
Identity = 40/48 (83.33%), Postives = 40/48 (83.33%), Query Frame = -3

Query:    2 FSQKKCPDLIRVAPNPKWVAGISANFTGF*PGLPEKTKTQNFFSK*KA 145
            F  KK PDLIRVAPNPK VAGISANFTGF*  LPEKTKTQ FF K*KA
Sbjct:   92 FFPKKYPDLIRVAPNPKRVAGISANFTGF*SRLPEKTKTQIFFXK*KA 235

HSP 16

Score: 30.8509 bits (61), Expect = 5.49231e-22
Identity = 13/17 (76.47%), Postives = 14/17 (82.35%), Query Frame = -3

Query:  134 YLKQRQKM*MLDFFSQK 184
            YL QRQKM MLDFF +K
Sbjct:  221 YLIQRQKMSMLDFFPKK 271

Blast Hits to Contigs V2 CCall

Analysis Date: 11-18-2009 (Blast: WO454_contigs_v2_vs_CCall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.

Match Name	E value	Identity
CCall_contig1014_v2	1.21436e-34	85.42%
CCall_contig1014_v2
HSP 1 Score: 101.873 bits (216), Expect = 1.21436e-34 Identity = 41/48 (85.42%), Postives = 44/48 (91.67%), Query Frame = -1 Query: 1 FPKKNVQISEWLQIRNGLLGFLPISLDSDPGCRKKQKPRIFFQSERH 144 F +KN+QISEWLQIRNGL GFLPIS DSDPGCRKKQKPR FFQS+RH Sbjct: 91 FFQKNIQISEWLQIRNGLPGFLPISPDSDPGCRKKQKPRFFFQSKRH 234 HSP 2* Score: 40.9315 bits (83), Expect = 1.21436e-34 Identity = 15/23 (65.22%), Postives = 16/23 (69.57%), Query Frame = -1 Query: 136 KTCLVGFILNNVKKCKCWIFFPK 204 K GFI NVKKC+CWIFF K Sbjct: 223 KNLSCGFISYNVKKCQCWIFFQK 291 HSP 3 Score: 34.0583 bits (68), Expect = 1.21436e-34 Identity = 13/15 (86.67%), Postives = 13/15 (86.67%), Query Frame = -3 Query: 185 FITVTHKLKNLSCGF 229 F VTHKLKNLSCGF Sbjct: 271 FHQVTHKLKNLSCGF 315 HSP 4 Score: 102.331 bits (217), Expect = 6.09336e-32 Identity = 40/48 (83.33%), Postives = 40/48 (83.33%), Query Frame = 2 Query: 2 CLSLKKILGFCFFRQPGSESSEIGRNPSNPFRIWSHSDQIWTFFLGK 145 CL L KK LGFCFFRQPGSES EIGRNP NPFRIWSHSDQIW FF K Sbjct: 92 CLLLXKKNLGFCFFRQPGSESGEIGRNPGNPFRIWSHSDQIWIFFWKK 235 HSP 5* Score: 35.433 bits (71), Expect = 6.09336e-32 Identity = 15/23 (65.22%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 136 FGKKNPTFTFFDVVDKTHKTSF 204 F +KNPT TFFDVVDK + F Sbjct: 223 FLEKNPTLTFFDVVDKPTRQVF 291 HSP 6* Score: 29.9345 bits (59), Expect = 6.09336e-32 Identity = 11/12 (91.67%), Postives = 12/12 (100.00%), Query Frame = 2 Query: 185 KPTRQVFEFMSD 220 KPTRQVF+FMSD Sbjct: 271 KPTRQVFKFMSD 306 HSP 7 Score: 97.2911 bits (206), Expect = 4.70719e-30 Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = 3 Query: 3 AFHFEKKFWVFVFSGNPGQNPVKLAEIPATHFGFGATRIKSGHFFWEKKS 152 AF+F KK WVFVFSGN QNPVKLAEIPAT FGFGATRIKSG+FF +K + Sbjct: 93 AFYFXKKIWVFVFSGNLDQNPVKLAEIPATRFGFGATRIKSGYFFGKKSN 242 HSP 8 Score: 34.5166 bits (69), Expect = 4.70719e-30 Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 2 Query: 134 FLGKKIQHLHFLTLFKIKP 190 F KKIQH HFLTL++I P Sbjct: 221 FFWKKIQHHFLTLYEINP 277 HSP 9* Score: 29.4763 bits (58), Expect = 4.70719e-30 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1 Query: 187 THKTSFVYEP 222 THKTSFVYEP Sbjct: 273 THKTSFVYEP 308 HSP 10 Score: 96.8329 bits (205), Expect = 2.22064e-29 Identity = 39/48 (81.25%), Postives = 43/48 (89.58%), Query Frame = 1 Query: 1 VPFTLKKNSGFLFFPATRVRIQNWQKSQQPISDLEPLGSNLDIFFGK 144 VPFTL K SGFLFFPAT +RI+NWQKS+QP+SDLEPLGSNLDIF K Sbjct: 91 VPFTLXKKSGFLFFPATWIRIRNWQKSRQPVSDLEPLGSNLDIFLEK 234 HSP 11* Score: 33.1419 bits (66), Expect = 2.22064e-29 Identity = 14/24 (58.33%), Postives = 18/24 (75.00%), Query Frame = 3 Query: 132 FFWEKKSNIYIFRCLRNPQDKF 203 +F+ KKSNI IFRC+R + F Sbjct: 219 YFFGKKSNIDIFRCMRTHKTSF 290 HSP 12 Score: 29.0181 bits (57), Expect = 2.22064e-29 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 3 Query: 186 NPQDKFLSLVT 221 NPQDKFLSLVT Sbjct: 272 NPQDKFLSLVT 307 HSP 13* Score: 99.124 bits (210), Expect = 6.50738e-26 Identity = 39/48 (81.25%), Postives = 42/48 (87.50%), Query Frame = -2 Query: 3 FFPKKMSRFDPSGSKSEMGCWDFCQFHWILTRVAGKNKNPEFFFKVKG 146 FF KK+SRFDPSGSKSE GC DFCQFH IL +VAGKNKNP+FF KVKG Sbjct: 93 FFSKKISRFDPSGSKSETGCRDFCQFHRILIQVAGKNKNPDFFXKVKG 236 HSP 14 Score: 32.2255 bits (64), Expect = 6.50738e-26 Identity = 16/23 (69.57%), Postives = 16/23 (69.57%), Query Frame = -2 Query: 135 KLVLWVLSTTSKNVNVGFFFPK 203 K L LS TTSKNVNVGFF K Sbjct: 222 KTCLVGLSHTTSKNVNVGFFSKK 290 HSP 15* Score: 87.2105 bits (184), Expect = 5.70066e-22 Identity = 40/48 (83.33%), Postives = 40/48 (83.33%), Query Frame = -3 Query: 2 FSQKKCPDLIRVAPNPKWVAGISANFTGFPGLPEKTKTQNFFSKKA 145 F KK PDLIRVAPNPK VAGISANFTGF* LPEKTKTQ FF KKA Sbjct: 92 FFPKKYPDLIRVAPNPKRVAGISANFTGFSRLPEKTKTQIFFXKKA 235 HSP 16* Score: 30.8509 bits (61), Expect = 5.70066e-22 Identity = 13/17 (76.47%), Postives = 14/17 (82.35%), Query Frame = -3 Query: 134 YLKQRQKM*MLDFFSQK 184 YL QRQKM MLDFF +K Sbjct: 221 YLIQRQKMSMLDFFPKK 271

Match Name

E value

Identity

CCall_contig1014_v2

1.21436e-34

85.42%

CCall_contig1014_v2

HSP 1

Score: 101.873 bits (216), Expect = 1.21436e-34
Identity = 41/48 (85.42%), Postives = 44/48 (91.67%), Query Frame = -1

Query:    1 FPKKNVQI*SEWLQIRNGLLGFLPISLDSDPGCRKKQKPRIFFQSERH 144
            F +KN+QI*SEWLQIRNGL GFLPIS DSDPGCRKKQKPR FFQS+RH
Sbjct:   91 FFQKNIQI*SEWLQIRNGLPGFLPISPDSDPGCRKKQKPRFFFQSKRH 234

HSP 2

Score: 40.9315 bits (83), Expect = 1.21436e-34
Identity = 15/23 (65.22%), Postives = 16/23 (69.57%), Query Frame = -1

Query:  136 KTCLVGFILNNVKKCKCWIFFPK 204
            K    GFI  NVKKC+CWIFF K
Sbjct:  223 KNLSCGFISYNVKKCQCWIFFQK 291

HSP 3

Score: 34.0583 bits (68), Expect = 1.21436e-34
Identity = 13/15 (86.67%), Postives = 13/15 (86.67%), Query Frame = -3

Query:  185 FITVTHKLKNLSCGF 229
            F  VTHKLKNLSCGF
Sbjct:  271 FHQVTHKLKNLSCGF 315

HSP 4

Score: 102.331 bits (217), Expect = 6.09336e-32
Identity = 40/48 (83.33%), Postives = 40/48 (83.33%), Query Frame = 2

Query:    2 CLSL*KKILGFCFFRQPGSESSEIGRNPSNPFRIWSHSDQIWTFFLGK 145
            CL L KK LGFCFFRQPGSES EIGRNP NPFRIWSHSDQIW FF  K
Sbjct:   92 CLLLXKKNLGFCFFRQPGSESGEIGRNPGNPFRIWSHSDQIWIFFWKK 235

HSP 5

Score: 35.433 bits (71), Expect = 6.09336e-32
Identity = 15/23 (65.22%), Postives = 17/23 (73.91%), Query Frame = 1

Query:  136 FGKKNPTFTFFDVV*DKTHKTSF 204
            F +KNPT TFFDVV*DK  +  F
Sbjct:  223 FLEKNPTLTFFDVV*DKPTRQVF 291

HSP 6

Score: 29.9345 bits (59), Expect = 6.09336e-32
Identity = 11/12 (91.67%), Postives = 12/12 (100.00%), Query Frame = 2

Query:  185 KPTRQVFEFMSD 220
            KPTRQVF+FMSD
Sbjct:  271 KPTRQVFKFMSD 306

HSP 7

Score: 97.2911 bits (206), Expect = 4.70719e-30
Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = 3

Query:    3 AFHFEKKFWVFVFSGNPGQNPVKLAEIPATHFGFGATRIKSGHFFWEKKS 152
            AF+F KK WVFVFSGN  QNPVKLAEIPAT FGFGATRIKSG+FF +K +
Sbjct:   93 AFYFXKKIWVFVFSGNLDQNPVKLAEIPATRFGFGATRIKSGYFFGKKSN 242

HSP 8

Score: 34.5166 bits (69), Expect = 4.70719e-30
Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 2

Query:  134 FLGKKIQHLHFLTLFKIKP 190
            F  KKIQH HFLTL++I P
Sbjct:  221 FFWKKIQH*HFLTLYEINP 277

HSP 9

Score: 29.4763 bits (58), Expect = 4.70719e-30
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1

Query:  187 THKTSF*VYE*P 222
            THKTSF*VYE*P
Sbjct:  273 THKTSF*VYE*P 308

HSP 10

Score: 96.8329 bits (205), Expect = 2.22064e-29
Identity = 39/48 (81.25%), Postives = 43/48 (89.58%), Query Frame = 1

Query:    1 VPFTLKKNSGFLFFPATRVRIQ*NWQKSQQPISDLEPLGSNLDIFFGK 144
            VPFTL K SGFLFFPAT +RI+*NWQKS+QP+SDLEPLGSNLDIF  K
Sbjct:   91 VPFTLXKKSGFLFFPATWIRIR*NWQKSRQPVSDLEPLGSNLDIFLEK 234

HSP 11

Score: 33.1419 bits (66), Expect = 2.22064e-29
Identity = 14/24 (58.33%), Postives = 18/24 (75.00%), Query Frame = 3

Query:  132 FFWEKKSNIYIF*RCLR*NPQDKF 203
            +F+ KKSNI IF*RC+R*  +  F
Sbjct:  219 YFFGKKSNIDIF*RCMR*THKTSF 290

HSP 12

Score: 29.0181 bits (57), Expect = 2.22064e-29
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 3

Query:  186 NPQDKFLSL*VT 221
            NPQDKFLSL*VT
Sbjct:  272 NPQDKFLSL*VT 307

HSP 13

Score: 99.124 bits (210), Expect = 6.50738e-26
Identity = 39/48 (81.25%), Postives = 42/48 (87.50%), Query Frame = -2

Query:    3 FFPKKMSRFDPSGSKSEMGCWDFCQFHWILTRVAGKNKNPEFFFKVKG 146
            FF KK+SRFDPSGSKSE GC DFCQFH IL +VAGKNKNP+FF KVKG
Sbjct:   93 FFSKKISRFDPSGSKSETGCRDFCQFHRILIQVAGKNKNPDFFXKVKG 236

HSP 14

Score: 32.2255 bits (64), Expect = 6.50738e-26
Identity = 16/23 (69.57%), Postives = 16/23 (69.57%), Query Frame = -2

Query:  135 KLVLWVLS*TTSKNVNVGFFFPK 203
            K  L  LS TTSKNVNVGFF  K
Sbjct:  222 KTCLVGLSHTTSKNVNVGFFSKK 290

HSP 15

Score: 87.2105 bits (184), Expect = 5.70066e-22
Identity = 40/48 (83.33%), Postives = 40/48 (83.33%), Query Frame = -3

Query:    2 FSQKKCPDLIRVAPNPKWVAGISANFTGF*PGLPEKTKTQNFFSK*KA 145
            F  KK PDLIRVAPNPK VAGISANFTGF*  LPEKTKTQ FF K*KA
Sbjct:   92 FFPKKYPDLIRVAPNPKRVAGISANFTGF*SRLPEKTKTQIFFXK*KA 235

HSP 16

Score: 30.8509 bits (61), Expect = 5.70066e-22
Identity = 13/17 (76.47%), Postives = 14/17 (82.35%), Query Frame = -3

Query:  134 YLKQRQKM*MLDFFSQK 184
            YL QRQKM MLDFF +K
Sbjct:  221 YLIQRQKMSMLDFFPKK 271

Blast Hits to Contig V2 Oall

Analysis Date: 11-18-2009 (Blast: WO454_contigs_v2_vs_Oall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.

Match Name	E value	Identity
Oall_contig581_v2	3.25189e-75	100.00%
Oall_contig581_v2
HSP 1 Score: 276.909 bits (598), Expect = 3.25189e-75 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = -2 Query: 3 LLFNTKTNPHESQPQAQSRFAFHLPITILQKPFLFHHGHSTQKLVLWVLSTTSKNVNVGFFFPKKMSRFDPSGSKSEMGCWDFCQFHWILTRVAGKNKNPEFFFKVKG 332 LLFNTKTNPHESQPQAQSRFAFHLPITILQKPFLFHHGHSTQKLVLWVLSTTSKNVNVGFFFPKKMSRFDPSGSKSEMGCWDFCQFHWILTRVAGKNKNPEFFFKVKG Sbjct: 3 LLFNTKTNPHESQPQAQSRFAFHLPITILQKPFLFHHGHSTQKLVLWVLSTTSKNVNVGFFFPKKMSRFDPSGSKSEMGCWDFCQFHWILTRVAGKNKNPEFFFKVKG 332 HSP 2 Score: 273.701 bits (591), Expect = 3.00384e-74 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 3 Query: 3 AFHFEKKFWVFVFSGNPGQNPVKLAEIPATHFGFGATRIKSGHFFWEKKSNIYIFRCLRNPQDKFLSLVTVMKKWFLNCNGKMKCKSGLCLWLRLMGICFSIEEQ 332 AFHFEKKFWVFVFSGNPGQNPVKLAEIPATHFGFGATRIKSGHFFWEKKSNIYIFRCLRNPQDKFLSLVTVMKKWFLNCNGKMKCKSGLCLWLRLMGICFSIEEQ Sbjct: 3 AFHFEKKFWVFVFSGNPGQNPVKLAEIPATHFGFGATRIKSGHFFWEKKSNIYIFRCLRNPQDKFLSLVTVMKKWFLNCNGKMKCKSGLCLWLRLMGICFSIEEQ 332 HSP 3* Score: 272.785 bits (589), Expect = 5.66952e-74 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = -3 Query: 2 CSSILKQIPMSLNHKHNPDLHFIFPLQFYRNHFYFITVTHKLKNLSCGFYLKQRQKMMLDFFSQKKCPDLIRVAPNPKWVAGISANFTGFPGLPEKTKTQNFFSKKA 331 CSSILKQIPMSLNHKHNPDLHFIFPLQFYRNHFYFITVTHKLKNLSCGFYLKQRQKMMLDFFSQKKCPDLIRVAPNPKWVAGISANFTGFPGLPEKTKTQNFFSKKA Sbjct: 2 CSSILKQIPMSLNHKHNPDLHFIFPLQFYRNHFYFITVTHKLKNLSCGFYLKQRQKMMLDFFSQKKCPDLIRVAPNPKWVAGISANFTGFPGLPEKTKTQNFFSKKA 331 HSP 4* Score: 266.828 bits (576), Expect = 3.52124e-72 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 2 Query: 2 CLSLKKILGFCFFRQPGSESSEIGRNPSNPFRIWSHSDQIWTFFLGKKIQHLHFLTLFKIKPTRQVFEFMSDRDEIEMVSVELWEDEMQIWIVLVVETHGDLFYRA 331 CLSLKKILGFCFFRQPGSESSEIGRNPSNPFRIWSHSDQIWTFFLGKKIQHLHFLTLFKIKPTRQVFEFMSDRDEIEMVSVELWEDEMQIWIVLVVETHGDLFYRA Sbjct: 2 CLSLKKILGFCFFRQPGSESSEIGRNPSNPFRIWSHSDQIWTFFLGKKIQHLHFLTLFKIKPTRQVFEFMSDRDEIEMVSVELWEDEMQIWIVLVVETHGDLFYRA 331 HSP 5 Score: 262.704 bits (567), Expect = 6.13911e-71 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 1 Query: 1 VPFTLKKNSGFLFFPATRVRIQNWQKSQQPISDLEPLGSNLDIFFGKKNPTFTFFDVVDKTHKTSFVYEP*NRNGFCRIVMGRNANLDCACGDSWGFVLVLKSK 333 VPFTLKKNSGFLFFPATRVRIQNWQKSQQPISDLEPLGSNLDIFFGKKNPTFTFFDVVDKTHKTSFVYEPNRNGFCRIVMGRNANLDCACGDSWGFVLVLKSK Sbjct: 1 VPFTLKKNSGFLFFPATRVRIQNWQKSQQPISDLEPLGSNLDIFFGKKNPTFTFFDVVDKTHKTSFVYEPNRNGFCRIVMGRNANLDCACGDSWGFVLVLKSK 333 HSP 6* Score: 230.63 bits (497), Expect = 2.77665e-61 Identity = 99/111 (89.19%), Postives = 99/111 (89.19%), Query Frame = -1 Query: 1 LALQYNKSPVXXXXXXXXXXXXSHYNSTETISISSRSLINSKTCLVGFILNNVKKCKCWIFFPKKNVQISEWLQIRNGLLGFLPISLDSDPGCRKKQKPRIFFQSERH 333 LALQYNKSPV SHYNSTETISISSRSLINSKTCLVGFILNNVKKCKCWIFFPKKNVQISEWLQIRNGLLGFLPISLDSDPGCRKKQKPRIFFQSERH Sbjct: 1 LALQYNKSPVSTTSTIQICISSSHYNSTETISISSRSLINSKTCLVGFILNNVKKCKCWIFFPKKNVQI*SEWLQIRNGLLGFLPISLDSDPGCRKKQKPRIFFQSERH 333

Match Name

E value

Identity

Oall_contig581_v2

3.25189e-75

100.00%

Oall_contig581_v2

HSP 1

Score: 276.909 bits (598), Expect = 3.25189e-75
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = -2

Query:    3 LLFNTKTNPHESQPQAQSRFAFHLPITILQKPFLFHHGHS*TQKLVLWVLS*TTSKNVNVGFFFPKKMSRFDPSGSKSEMGCWDFCQFHWILTRVAGKNKNPEFFFKVKG 332
            LLFNTKTNPHESQPQAQSRFAFHLPITILQKPFLFHHGHS*TQKLVLWVLS*TTSKNVNVGFFFPKKMSRFDPSGSKSEMGCWDFCQFHWILTRVAGKNKNPEFFFKVKG
Sbjct:    3 LLFNTKTNPHESQPQAQSRFAFHLPITILQKPFLFHHGHS*TQKLVLWVLS*TTSKNVNVGFFFPKKMSRFDPSGSKSEMGCWDFCQFHWILTRVAGKNKNPEFFFKVKG 332

HSP 2

Score: 273.701 bits (591), Expect = 3.00384e-74
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 3

Query:    3 AFHFEKKFWVFVFSGNPGQNPVKLAEIPATHFGFGATRIKSGHFFWEKKSNIYIF*RCLR*NPQDKFLSL*VTVMK*KWFL*NCNGKMKCKSGLCLWLRLMGICFSIEEQ 332
            AFHFEKKFWVFVFSGNPGQNPVKLAEIPATHFGFGATRIKSGHFFWEKKSNIYIF*RCLR*NPQDKFLSL*VTVMK*KWFL*NCNGKMKCKSGLCLWLRLMGICFSIEEQ
Sbjct:    3 AFHFEKKFWVFVFSGNPGQNPVKLAEIPATHFGFGATRIKSGHFFWEKKSNIYIF*RCLR*NPQDKFLSL*VTVMK*KWFL*NCNGKMKCKSGLCLWLRLMGICFSIEEQ 332

HSP 3

Score: 272.785 bits (589), Expect = 5.66952e-74
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = -3

Query:    2 CSSILKQIPMSLNHKHNPDLHFIFPLQFYRNHFYFITVTHKLKNLSCGFYLKQRQKM*MLDFFSQKKCPDLIRVAPNPKWVAGISANFTGF*PGLPEKTKTQNFFSK*KA 331
            CSSILKQIPMSLNHKHNPDLHFIFPLQFYRNHFYFITVTHKLKNLSCGFYLKQRQKM*MLDFFSQKKCPDLIRVAPNPKWVAGISANFTGF*PGLPEKTKTQNFFSK*KA
Sbjct:    2 CSSILKQIPMSLNHKHNPDLHFIFPLQFYRNHFYFITVTHKLKNLSCGFYLKQRQKM*MLDFFSQKKCPDLIRVAPNPKWVAGISANFTGF*PGLPEKTKTQNFFSK*KA 331

HSP 4

Score: 266.828 bits (576), Expect = 3.52124e-72
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 2

Query:    2 CLSL*KKILGFCFFRQPGSESSEIGRNPSNPFRIWSHSDQIWTFFLGKKIQHLHFLTLFKIKPTRQVFEFMSDRDEIEMVSVEL*WEDEMQIWIVLVVETHGDLF*Y*RA 331
            CLSL*KKILGFCFFRQPGSESSEIGRNPSNPFRIWSHSDQIWTFFLGKKIQHLHFLTLFKIKPTRQVFEFMSDRDEIEMVSVEL*WEDEMQIWIVLVVETHGDLF*Y*RA
Sbjct:    2 CLSL*KKILGFCFFRQPGSESSEIGRNPSNPFRIWSHSDQIWTFFLGKKIQHLHFLTLFKIKPTRQVFEFMSDRDEIEMVSVEL*WEDEMQIWIVLVVETHGDLF*Y*RA 331

HSP 5

Score: 262.704 bits (567), Expect = 6.13911e-71
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 1

Query:    1 VPFTLKKNSGFLFFPATRVRIQ*NWQKSQQPISDLEPLGSNLDIFFGKKNPTFTFFDVV*DKTHKTSF*VYE*P**NRNGFCRIVMGR*NANLDCACG*DSWGFVLVLKSK 333
            VPFTLKKNSGFLFFPATRVRIQ*NWQKSQQPISDLEPLGSNLDIFFGKKNPTFTFFDVV*DKTHKTSF*VYE*P**NRNGFCRIVMGR*NANLDCACG*DSWGFVLVLKSK
Sbjct:    1 VPFTLKKNSGFLFFPATRVRIQ*NWQKSQQPISDLEPLGSNLDIFFGKKNPTFTFFDVV*DKTHKTSF*VYE*P**NRNGFCRIVMGR*NANLDCACG*DSWGFVLVLKSK 333

HSP 6

Score: 230.63 bits (497), Expect = 2.77665e-61
Identity = 99/111 (89.19%), Postives = 99/111 (89.19%), Query Frame = -1

Query:    1 LALQY*NKSP*VXXXXXXXXXXXXSHYNSTETISISSRSLINSKTCLVGFILNNVKKCKCWIFFPKKNVQI*SEWLQIRNGLLGFLPISLDSDPGCRKKQKPRIFFQSERH 333
            LALQY*NKSP*V            SHYNSTETISISSRSLINSKTCLVGFILNNVKKCKCWIFFPKKNVQI*SEWLQIRNGLLGFLPISLDSDPGCRKKQKPRIFFQSERH
Sbjct:    1 LALQY*NKSP*VSTTSTIQICISSSHYNSTETISISSRSLINSKTCLVGFILNNVKKCKCWIFFPKKNVQI*SEWLQIRNGLLGFLPISLDSDPGCRKKQKPRIFFQSERH 333

Fagaceae Genomics Web

WO454_contig247_v2

References

ESTs in this contig

InterProScan Analysis

Blast Hits to Contigs V2 CC454

Blast Hits to Contigs V2 CCall

Blast Hits to Contig V2 Oall

Organisms

Project Information

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