Fagaceae Genomics Web

Oall_contig40263_v2

Name	Oall_contig40263_v2
Accession	ID7192960
Sequence	GGGCTAATCATAATTTTATTTTTTTTCTATATTTCAGTTCCCGTTGCGAA AAGTCCTGGTCCTGTCTTTGACTTTATTGTTTTCTCTATTTACTTCATGC CTTAGTAATTATACTGAAATGACTCTATGTCTCTTTGTATGTGTAATTTT GACCATGTTTTGTGTATCAAATTATTATAGGTATCATTATTTGTTTTTAC ACTNNNGGcTTCANTNTTNTTgTNATAATNATAATAATAATAATAATAAT AATAATNATNATAACTACaAATTNNATNTANAAAAAAATTAAAATACAAG TAGCTAAAAATTGTCCACTTTCTTGTACATAAAGTAATAACTAATAACAC CATGGTTGCTTCTTGCTTGAGCTTGACCAATGGTATTATTTTGTACCGCT TGAAATCTATGGTTGTGGAAAAAACCTGTCCAGTAAAAACTAAACAGAAT AAAA
Length	454
Type	contig
Organism	Oak

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References

Dababase	Accession
GFF_source	SeqManPro

ESTs in this contig

Type	Feature	Position
EST	WOA_090084_1334_0958	0-282
EST	ROA_035865_2628_3514	201-454
microsatellite	Oall_contig40263_v2-ssr231	230	254	0

InterProScan Analysis

Analysis Date: 11-20-2009 (Interpro: Oall_contigs_v2)

SEQUENCE: Oall_contig40263_v2_1_ORF2 CRC64: 3B2C285B9D27B957 LENGTH: 50 aa
No hits reported.

SEQUENCE: Oall_contig40263_v2_2_ORF2 CRC64: 3D6700D59B82EDBA LENGTH: 92 aa
No hits reported.

SEQUENCE: Oall_contig40263_v2_3_ORF2 CRC64: 7A89C08AAB1EC2BD LENGTH: 59 aa
No hits reported.

SEQUENCE: Oall_contig40263_v2_4_ORF1 CRC64: 1D83A5A419C78C47 LENGTH: 49 aa
No hits reported.

SEQUENCE: Oall_contig40263_v2_6_ORF1 CRC64: 0913AEBB83400AAF LENGTH: 116 aa
No hits reported.

SEQUENCE: Oall_contig40263_v2_1_ORF2 CRC64: 3B2C285B9D27B957 LENGTH: 50 aa
No hits reported.

SEQUENCE: Oall_contig40263_v2_2_ORF2 CRC64: 3D6700D59B82EDBA LENGTH: 92 aa
No hits reported.

SEQUENCE: Oall_contig40263_v2_3_ORF2 CRC64: 7A89C08AAB1EC2BD LENGTH: 59 aa
No hits reported.

SEQUENCE: Oall_contig40263_v2_4_ORF1 CRC64: 1D83A5A419C78C47 LENGTH: 49 aa
No hits reported.

SEQUENCE: Oall_contig40263_v2_6_ORF1 CRC64: 0913AEBB83400AAF LENGTH: 116 aa
No hits reported.

Blast Hits to Contigs V2 AC454

Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_AC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.

Match Name	E value	Identity
AC454_contig3540_v2	1.74834e-26	97.62%
AC454_contig3540_v2
HSP 1 Score: 108.288 bits (230), Expect = 1.74834e-26 Identity = 41/42 (97.62%), Postives = 41/42 (97.62%), Query Frame = 3 Query: 297 QVAKNCPLSCTSNNHHGCFLLELDQWYYFVPLEIYGCGK 422 QVAKNCPLSCTSNN*HHGCFLLELDQWYYF PLEIYGCGK Sbjct: 163 QVAKNCPLSCTSNNHHGCFLLELDQWYYFAPLEIYGCGK 288 HSP 2 Score: 26.2688 bits (51), Expect = 1.74834e-26 Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 Query: 421 KTCPVKTKQNK 453 KTC VKTKQNK Sbjct: 133 KTCLVKTKQNK 165 HSP 3** Score: 98.6658 bits (209), Expect = 1.02638e-24 Identity = 40/41 (97.56%), Postives = 40/41 (97.56%), Query Frame = -1 Query: 299 FPQPISSGTKYHWSSSSKKQPWCYLLLYVQESGQFLAT 421 FPQPISSG KYHWSSSSKKQPWCYLLLYVQESGQFLAT Sbjct: 164 FPQPISSGAKYHWSSSSKKQPWCYLLLYVQESGQFLAT 286 HSP 4* Score: 29.9345 bits (59), Expect = 1.02638e-24 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = -1 Query: 419 FYSVFLLDRFF 454 FYSVFLLDRFF Sbjct: 132 FYSVFLLDRFF 167 HSP 5* Score: 93.6255 bits (198), Expect = 3.92304e-22 Identity = 40/47 (85.11%), Postives = 42/47 (89.36%), Query Frame = -3 Query: 282 FSTTIDFKRYKIIPLVKLKQEATMVLLVITLCTRKWTIFSYLYFNFF 422 FSTTI+FK KIIPLVKLKQEATMVLL+ITLCTRKWTIFSYL FF Sbjct: 163 FSTTINFKWCKIIPLVKLKQEATMVLLIITLCTRKWTIFSYLILIFF 303 HSP 6 Score: 26.2688 bits (51), Expect = 3.92304e-22 Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = -3 Query: 420 LFCLVFTGQVF 452 LFCLVFT QVF Sbjct: 134 LFCLVFTRQVF 166 HSP 7 Score: 93.1672 bits (197), Expect = 7.3323e-22 Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = -2 Query: 310 FFHNHRFQAVQNNTIGQAQARSNHGVISYYFMYKKVDN 423 FFHNH+FQ VQNNTIGQAQARSNHGVI+YYFMYKKVDN Sbjct: 162 FFHNHKFQVVQNNTIGQAQARSNHGVINYYFMYKKVDN 275 HSP 8 Score: 25.8106 bits (50), Expect = 7.3323e-22 Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = -2 Query: 421 FILFSFYWTGF 453 FILFSFY TGF Sbjct: 133 FILFSFYTGF 165 HSP 9* Score: 90.8762 bits (192), Expect = 1.22176e-20 Identity = 41/46 (89.13%), Postives = 42/46 (91.30%), Query Frame = 2 Query: 284 KNNTSSKLSTFLYIK*LITPWLLLAAPMVLFCTANLWLWK 421 K +SSKLSTFLYIKLITPWLLLAAPMVLFCT NLWLWK Sbjct: 164 KKLKSSSKLSTFLYIKLITPWLLLAAPMVLFCTTNLWLWK 301 HSP 10 Score: 23.9778 bits (46), Expect = 1.22176e-20 Identity = 11/11 (100.00%), Postives = 11/11 (100.00%), Query Frame = 3 Query: 420 KNLSSKNTE 452 KNLSSKNTE Sbjct: 134 KNLSSKNTE 166 HSP 11 Score: 78.9628 bits (166), Expect = 1.03965e-16 Identity = 34/38 (89.47%), Postives = 35/38 (92.11%), Query Frame = 1 Query: 310 IVHFLVHKVITNNTMVASCLSLTNGIILYRLKSMVVEK 423 IVHFLVHKVI NNTMVASCLSLTNGIIL+ LK MVVEK Sbjct: 162 IVHFLVHKVIINNTMVASCLSLTNGIILHHLKFMVVEK 275 HSP 12 Score: 22.6031 bits (43), Expect = 1.03965e-16 Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 2 Query: 419 KKPVQKLNRIK 454 +KPV KLNRIK Sbjct: 132 EKPV**KLNRIK 167

Match Name

E value

Identity

AC454_contig3540_v2

1.74834e-26

97.62%

AC454_contig3540_v2

HSP 1

Score: 108.288 bits (230), Expect = 1.74834e-26
Identity = 41/42 (97.62%), Postives = 41/42 (97.62%), Query Frame = 3

Query:  297 QVAKNCPLSCT*SNN**HHGCFLLELDQWYYFVPLEIYGCGK 422
            QVAKNCPLSCT*SNN**HHGCFLLELDQWYYF PLEIYGCGK
Sbjct:  163 QVAKNCPLSCT*SNN**HHGCFLLELDQWYYFAPLEIYGCGK 288

HSP 2

Score: 26.2688 bits (51), Expect = 1.74834e-26
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1

Query:  421 KTCPVKTKQNK 453
            KTC VKTKQNK
Sbjct:  133 KTCLVKTKQNK 165

HSP 3

Score: 98.6658 bits (209), Expect = 1.02638e-24
Identity = 40/41 (97.56%), Postives = 40/41 (97.56%), Query Frame = -1

Query:  299 FPQP*ISSGTK*YHWSSSSKKQPWCY*LLLYVQESGQFLAT 421
            FPQP*ISSG K*YHWSSSSKKQPWCY*LLLYVQESGQFLAT
Sbjct:  164 FPQP*ISSGAK*YHWSSSSKKQPWCY*LLLYVQESGQFLAT 286

HSP 4

Score: 29.9345 bits (59), Expect = 1.02638e-24
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = -1

Query:  419 FYSV*FLLDRFF 454
            FYSV*FLLDRFF
Sbjct:  132 FYSV*FLLDRFF 167

HSP 5

Score: 93.6255 bits (198), Expect = 3.92304e-22
Identity = 40/47 (85.11%), Postives = 42/47 (89.36%), Query Frame = -3

Query:  282 FSTTIDFKRYKIIPLVKLKQEATMVLLVITLCTRKWTIFSYLYFNFF 422
            FSTTI+FK  KIIPLVKLKQEATMVLL+ITLCTRKWTIFSYL   FF
Sbjct:  163 FSTTINFKWCKIIPLVKLKQEATMVLLIITLCTRKWTIFSYLILIFF 303

HSP 6

Score: 26.2688 bits (51), Expect = 3.92304e-22
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = -3

Query:  420 LFCLVFTGQVF 452
            LFCLVFT QVF
Sbjct:  134 LFCLVFTRQVF 166

HSP 7

Score: 93.1672 bits (197), Expect = 7.3323e-22
Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = -2

Query:  310 FFHNHRFQAVQNNTIGQAQARSNHGVISYYFMYKKVDN 423
            FFHNH+FQ VQNNTIGQAQARSNHGVI+YYFMYKKVDN
Sbjct:  162 FFHNHKFQVVQNNTIGQAQARSNHGVINYYFMYKKVDN 275

HSP 8

Score: 25.8106 bits (50), Expect = 7.3323e-22
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = -2

Query:  421 FILFSFYWTGF 453
            FILFSFY TGF
Sbjct:  133 FILFSFY*TGF 165

HSP 9

Score: 90.8762 bits (192), Expect = 1.22176e-20
Identity = 41/46 (89.13%), Postives = 42/46 (91.30%), Query Frame = 2

Query:  284 KN*NTSS*KLSTFLYIK**LITPWLLLA*A*PMVLFCTA*NLWLWK 421
            K   +SS*KLSTFLYIK**LITPWLLLA*A*PMVLFCT *NLWLWK
Sbjct:  164 KKLKSSS*KLSTFLYIK**LITPWLLLA*A*PMVLFCTT*NLWLWK 301

HSP 10

Score: 23.9778 bits (46), Expect = 1.22176e-20
Identity = 11/11 (100.00%), Postives = 11/11 (100.00%), Query Frame = 3

Query:  420 KNLSSKN*TE* 452
            KNLSSKN*TE*
Sbjct:  134 KNLSSKN*TE* 166

HSP 11

Score: 78.9628 bits (166), Expect = 1.03965e-16
Identity = 34/38 (89.47%), Postives = 35/38 (92.11%), Query Frame = 1

Query:  310 IVHFLVHKVITNNTMVASCLSLTNGIILYRLKSMVVEK 423
            IVHFLVHKVI NNTMVASCLSLTNGIIL+ LK MVVEK
Sbjct:  162 IVHFLVHKVIINNTMVASCLSLTNGIILHHLKFMVVEK 275

HSP 12

Score: 22.6031 bits (43), Expect = 1.03965e-16
Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 2

Query:  419 KKPVQ*KLNRIK 454
            +KPV *KLNRIK
Sbjct:  132 EKPV**KLNRIK 167

Blast Hits to Contigs V2 CC454

Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_CC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.

Match Name	E value	Identity
CC454_contig42162_v2	4.09814e-20	100.00%
CC454_contig42162_v2
HSP 1 Score: 83.0867 bits (175), Expect = 4.09814e-20 Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = -1 Query: 323 FPQPISSGTKYHWSSSSKKQPWCYLLLYVQ 421 FPQPISSGTKYHWSSSSKKQPWCYLLLYVQ Sbjct: 2 FPQPISSGTKYHWSSSSKKQPWCYLLLYVQ 100 HSP 2* Score: 29.9345 bits (59), Expect = 4.09814e-20 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = -1 Query: 419 FYSVFLLDRFF 454 FYSVFLLDRFF Sbjct: 97 FYSVFLLDRFF 132 HSP 3* Score: 83.0867 bits (175), Expect = 4.98253e-19 Identity = 32/33 (96.97%), Postives = 32/33 (96.97%), Query Frame = 3 Query: 324 CTSNNHHGCFLLELDQWYYFVPLEIYGCGK 422 CTSNN*HHGCFLLELDQWYYFVPLEI GCGK Sbjct: 3 CTSNN*HHGCFLLELDQWYYFVPLEIGCGK 101 HSP 4 Score: 26.2688 bits (51), Expect = 4.98253e-19 Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 Query: 421 KTCPVKTKQNK 453 KTC VKTKQNK Sbjct: 99 KTCLVKTKQNK 131 HSP 5 Score: 78.5046 bits (165), Expect = 1.1281e-17 Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = -2 Query: 322 FFHNHRFQAVQNNTIGQAQARSNHGVISYYFMYK 423 FFHN +FQ VQNNTIGQAQARSNHGVI+YYFMYK Sbjct: 1 FFHNLKFQVVQNNTIGQAQARSNHGVINYYFMYK 102 HSP 6 Score: 26.2688 bits (51), Expect = 1.1281e-17 Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = -3 Query: 420 LFCLVFTGQVF 452 LFCLVFT QVF Sbjct: 98 LFCLVFTRQVF 130 HSP 7 Score: 69.7986 bits (146), Expect = 5.72243e-15 Identity = 29/33 (87.88%), Postives = 32/33 (96.97%), Query Frame = -3 Query: 324 FSTTIDFKRYKIIPLVKLKQEATMVLLVITLCT 422 FSTT++FK YKIIPLVKLKQEATMVLL+ITLCT Sbjct: 3 FSTTLNFKWYKIIPLVKLKQEATMVLLIITLCT 101 HSP 8 Score: 25.8106 bits (50), Expect = 5.72243e-15 Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = -2 Query: 421 FILFSFYWTGF 453 FILFSFY TGF Sbjct: 99 FILFSFYTGF 131 HSP 9* Score: 68.424 bits (143), Expect = 5.04361e-14 Identity = 31/33 (93.94%), Postives = 31/33 (93.94%), Query Frame = 2 Query: 323 LYIK*LITPWLLLAAPMVLFCTANLWLWK 421 LYIK*LITPWLLLAAPMVLFCT NL LWK Sbjct: 2 LYIK*LITPWLLLAAPMVLFCTTNLRLWK 100 HSP 10 Score: 23.9778 bits (46), Expect = 5.04361e-14 Identity = 11/11 (100.00%), Postives = 11/11 (100.00%), Query Frame = 3 Query: 420 KNLSSKNTE 452 KNLSSKNTE Sbjct: 98 KNLSSKNTE 130 HSP 11 Score: 68.424 bits (143), Expect = 1.28088e-13 Identity = 30/34 (88.24%), Postives = 30/34 (88.24%), Query Frame = 1 Query: 322 LVHKVITNNTMVASCLSLTNGIILYRLKSMVVEK 423 LVHKVI NNTMVASCLSLTNGIILY LK VVEK Sbjct: 1 LVHKVIINNTMVASCLSLTNGIILYHLKFKVVEK 102 HSP 12 Score: 22.6031 bits (43), Expect = 1.28088e-13 Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 2 Query: 419 KKPVQKLNRIK 454 +KPV KLNRIK Sbjct: 97 EKPV**KLNRIK 132

Match Name

E value

Identity

CC454_contig42162_v2

4.09814e-20

100.00%

CC454_contig42162_v2

HSP 1

Score: 83.0867 bits (175), Expect = 4.09814e-20
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = -1

Query:  323 FPQP*ISSGTK*YHWSSSSKKQPWCY*LLLYVQ 421
            FPQP*ISSGTK*YHWSSSSKKQPWCY*LLLYVQ
Sbjct:    2 FPQP*ISSGTK*YHWSSSSKKQPWCY*LLLYVQ 100

HSP 2

Score: 29.9345 bits (59), Expect = 4.09814e-20
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = -1

Query:  419 FYSV*FLLDRFF 454
            FYSV*FLLDRFF
Sbjct:   97 FYSV*FLLDRFF 132

HSP 3

Score: 83.0867 bits (175), Expect = 4.98253e-19
Identity = 32/33 (96.97%), Postives = 32/33 (96.97%), Query Frame = 3

Query:  324 CT*SNN**HHGCFLLELDQWYYFVPLEIYGCGK 422
            CT*SNN**HHGCFLLELDQWYYFVPLEI GCGK
Sbjct:    3 CT*SNN**HHGCFLLELDQWYYFVPLEI*GCGK 101

HSP 4

Score: 26.2688 bits (51), Expect = 4.98253e-19
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1

Query:  421 KTCPVKTKQNK 453
            KTC VKTKQNK
Sbjct:   99 KTCLVKTKQNK 131

HSP 5

Score: 78.5046 bits (165), Expect = 1.1281e-17
Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = -2

Query:  322 FFHNHRFQAVQNNTIGQAQARSNHGVISYYFMYK 423
            FFHN +FQ VQNNTIGQAQARSNHGVI+YYFMYK
Sbjct:    1 FFHNLKFQVVQNNTIGQAQARSNHGVINYYFMYK 102

HSP 6

Score: 26.2688 bits (51), Expect = 1.1281e-17
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = -3

Query:  420 LFCLVFTGQVF 452
            LFCLVFT QVF
Sbjct:   98 LFCLVFTRQVF 130

HSP 7

Score: 69.7986 bits (146), Expect = 5.72243e-15
Identity = 29/33 (87.88%), Postives = 32/33 (96.97%), Query Frame = -3

Query:  324 FSTTIDFKRYKIIPLVKLKQEATMVLLVITLCT 422
            FSTT++FK YKIIPLVKLKQEATMVLL+ITLCT
Sbjct:    3 FSTTLNFKWYKIIPLVKLKQEATMVLLIITLCT 101

HSP 8

Score: 25.8106 bits (50), Expect = 5.72243e-15
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = -2

Query:  421 FILFSFYWTGF 453
            FILFSFY TGF
Sbjct:   99 FILFSFY*TGF 131

HSP 9

Score: 68.424 bits (143), Expect = 5.04361e-14
Identity = 31/33 (93.94%), Postives = 31/33 (93.94%), Query Frame = 2

Query:  323 LYIK**LITPWLLLA*A*PMVLFCTA*NLWLWK 421
            LYIK**LITPWLLLA*A*PMVLFCT *NL LWK
Sbjct:    2 LYIK**LITPWLLLA*A*PMVLFCTT*NLRLWK 100

HSP 10

Score: 23.9778 bits (46), Expect = 5.04361e-14
Identity = 11/11 (100.00%), Postives = 11/11 (100.00%), Query Frame = 3

Query:  420 KNLSSKN*TE* 452
            KNLSSKN*TE*
Sbjct:   98 KNLSSKN*TE* 130

HSP 11

Score: 68.424 bits (143), Expect = 1.28088e-13
Identity = 30/34 (88.24%), Postives = 30/34 (88.24%), Query Frame = 1

Query:  322 LVHKVITNNTMVASCLSLTNGIILYRLKSMVVEK 423
            LVHKVI NNTMVASCLSLTNGIILY LK  VVEK
Sbjct:    1 LVHKVIINNTMVASCLSLTNGIILYHLKFKVVEK 102

HSP 12

Score: 22.6031 bits (43), Expect = 1.28088e-13
Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 2

Query:  419 KKPVQ*KLNRIK 454
            +KPV *KLNRIK
Sbjct:   97 EKPV**KLNRIK 132

Blast Hits to Contigs V2 CCall

Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_CCall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.

Match Name	E value	Identity
CCall_contig13839_v2	1.98564e-24	100.00%
CCall_contig13839_v2
HSP 1 Score: 98.6658 bits (209), Expect = 1.98564e-24 Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = -1 Query: 302 FPQPISSGTKYHWSSSSKKQPWCYLLLYVQESGQFLA 421 FPQPISSGTKYHWSSSSKKQPWCYLLLYVQESGQFLA Sbjct: 168 FPQPISSGTKYHWSSSSKKQPWCYLLLYVQESGQFLA 287 HSP 2* Score: 29.9345 bits (59), Expect = 1.98564e-24 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = -1 Query: 419 FYSVFLLDRFF 454 FYSVFLLDRFF Sbjct: 284 FYSVFLLDRFF 319 HSP 3* Score: 101.415 bits (215), Expect = 3.71416e-24 Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 3 Query: 300 VAKNCPLSCTSNNHHGCFLLELDQWYYFVPLEIYGCGK 422 +AKNCPLSCTSNN*HHGCFLLELDQWYYFVPLEI GCGK Sbjct: 166 LAKNCPLSCTSNN*HHGCFLLELDQWYYFVPLEIGCGK 288 HSP 4 Score: 26.2688 bits (51), Expect = 3.71416e-24 Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 Query: 421 KTCPVKTKQNK 453 KTC VKTKQNK Sbjct: 286 KTCLVKTKQNK 318 HSP 5 Score: 88.127 bits (186), Expect = 3.22791e-20 Identity = 34/38 (89.47%), Postives = 36/38 (94.74%), Query Frame = -2 Query: 310 FFHNHRFQAVQNNTIGQAQARSNHGVISYYFMYKKVDN 423 FFHN +FQ VQNNTIGQAQARSNHGVI+YYFMYKKVDN Sbjct: 176 FFHNLKFQVVQNNTIGQAQARSNHGVINYYFMYKKVDN 289 HSP 6 Score: 26.2688 bits (51), Expect = 3.22791e-20 Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = -3 Query: 420 LFCLVFTGQVF 452 LFCLVFT QVF Sbjct: 285 LFCLVFTRQVF 317 HSP 7 Score: 88.127 bits (186), Expect = 4.41154e-20 Identity = 36/40 (90.00%), Postives = 39/40 (97.50%), Query Frame = -3 Query: 303 FSTTIDFKRYKIIPLVKLKQEATMVLLVITLCTRKWTIFS 422 FSTT++FK YKIIPLVKLKQEATMVLL+ITLCTRKWTIFS Sbjct: 169 FSTTLNFKWYKIIPLVKLKQEATMVLLIITLCTRKWTIFS 288 HSP 8 Score: 25.8106 bits (50), Expect = 4.41154e-20 Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = -2 Query: 421 FILFSFYWTGF 453 FILFSFY TGF Sbjct: 286 FILFSFYTGF 318 HSP 9* Score: 81.712 bits (172), Expect = 1.21469e-17 Identity = 38/40 (95.00%), Postives = 38/40 (95.00%), Query Frame = 2 Query: 302 SKLSTFLYIKLITPWLLLAAPMVLFCTANLWLWK 421 SKLSTFLYIKLITPWLLLAAPMVLFCT NL LWK Sbjct: 168 SKLSTFLYIKLITPWLLLAAPMVLFCTTNLRLWK 287 HSP 10 Score: 23.9778 bits (46), Expect = 1.21469e-17 Identity = 11/11 (100.00%), Postives = 11/11 (100.00%), Query Frame = 3 Query: 420 KNLSSKNTE 452 KNLSSKNTE Sbjct: 285 KNLSSKNTE 317 HSP 11 Score: 78.5046 bits (165), Expect = 2.74143e-16 Identity = 34/38 (89.47%), Postives = 34/38 (89.47%), Query Frame = 1 Query: 310 IVHFLVHKVITNNTMVASCLSLTNGIILYRLKSMVVEK 423 IVHFLVHKVI NNTMVASCLSLTNGIILY LK VVEK Sbjct: 176 IVHFLVHKVIINNTMVASCLSLTNGIILYHLKFKVVEK 289 HSP 12 Score: 22.6031 bits (43), Expect = 2.74143e-16 Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 2 Query: 419 KKPVQKLNRIK 454 +KPV KLNRIK Sbjct: 284 EKPV**KLNRIK 319

Match Name

E value

Identity

CCall_contig13839_v2

1.98564e-24

100.00%

CCall_contig13839_v2

HSP 1

Score: 98.6658 bits (209), Expect = 1.98564e-24
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = -1

Query:  302 FPQP*ISSGTK*YHWSSSSKKQPWCY*LLLYVQESGQFLA 421
            FPQP*ISSGTK*YHWSSSSKKQPWCY*LLLYVQESGQFLA
Sbjct:  168 FPQP*ISSGTK*YHWSSSSKKQPWCY*LLLYVQESGQFLA 287

HSP 2

Score: 29.9345 bits (59), Expect = 1.98564e-24
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = -1

Query:  419 FYSV*FLLDRFF 454
            FYSV*FLLDRFF
Sbjct:  284 FYSV*FLLDRFF 319

HSP 3

Score: 101.415 bits (215), Expect = 3.71416e-24
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 3

Query:  300 VAKNCPLSCT*SNN**HHGCFLLELDQWYYFVPLEIYGCGK 422
            +AKNCPLSCT*SNN**HHGCFLLELDQWYYFVPLEI GCGK
Sbjct:  166 LAKNCPLSCT*SNN**HHGCFLLELDQWYYFVPLEI*GCGK 288

HSP 4

Score: 26.2688 bits (51), Expect = 3.71416e-24
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1

Query:  421 KTCPVKTKQNK 453
            KTC VKTKQNK
Sbjct:  286 KTCLVKTKQNK 318

HSP 5

Score: 88.127 bits (186), Expect = 3.22791e-20
Identity = 34/38 (89.47%), Postives = 36/38 (94.74%), Query Frame = -2

Query:  310 FFHNHRFQAVQNNTIGQAQARSNHGVISYYFMYKKVDN 423
            FFHN +FQ VQNNTIGQAQARSNHGVI+YYFMYKKVDN
Sbjct:  176 FFHNLKFQVVQNNTIGQAQARSNHGVINYYFMYKKVDN 289

HSP 6

Score: 26.2688 bits (51), Expect = 3.22791e-20
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = -3

Query:  420 LFCLVFTGQVF 452
            LFCLVFT QVF
Sbjct:  285 LFCLVFTRQVF 317

HSP 7

Score: 88.127 bits (186), Expect = 4.41154e-20
Identity = 36/40 (90.00%), Postives = 39/40 (97.50%), Query Frame = -3

Query:  303 FSTTIDFKRYKIIPLVKLKQEATMVLLVITLCTRKWTIFS 422
            FSTT++FK YKIIPLVKLKQEATMVLL+ITLCTRKWTIFS
Sbjct:  169 FSTTLNFKWYKIIPLVKLKQEATMVLLIITLCTRKWTIFS 288

HSP 8

Score: 25.8106 bits (50), Expect = 4.41154e-20
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = -2

Query:  421 FILFSFYWTGF 453
            FILFSFY TGF
Sbjct:  286 FILFSFY*TGF 318

HSP 9

Score: 81.712 bits (172), Expect = 1.21469e-17
Identity = 38/40 (95.00%), Postives = 38/40 (95.00%), Query Frame = 2

Query:  302 S*KLSTFLYIK**LITPWLLLA*A*PMVLFCTA*NLWLWK 421
            S*KLSTFLYIK**LITPWLLLA*A*PMVLFCT *NL LWK
Sbjct:  168 S*KLSTFLYIK**LITPWLLLA*A*PMVLFCTT*NLRLWK 287

HSP 10

Score: 23.9778 bits (46), Expect = 1.21469e-17
Identity = 11/11 (100.00%), Postives = 11/11 (100.00%), Query Frame = 3

Query:  420 KNLSSKN*TE* 452
            KNLSSKN*TE*
Sbjct:  285 KNLSSKN*TE* 317

HSP 11

Score: 78.5046 bits (165), Expect = 2.74143e-16
Identity = 34/38 (89.47%), Postives = 34/38 (89.47%), Query Frame = 1

Query:  310 IVHFLVHKVITNNTMVASCLSLTNGIILYRLKSMVVEK 423
            IVHFLVHKVI NNTMVASCLSLTNGIILY LK  VVEK
Sbjct:  176 IVHFLVHKVIINNTMVASCLSLTNGIILYHLKFKVVEK 289

HSP 12

Score: 22.6031 bits (43), Expect = 2.74143e-16
Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 2

Query:  419 KKPVQ*KLNRIK 454
            +KPV *KLNRIK
Sbjct:  284 EKPV**KLNRIK 319

Fagaceae Genomics Web

Oall_contig40263_v2

References

ESTs in this contig

InterProScan Analysis

Blast Hits to Contigs V2 AC454

Blast Hits to Contigs V2 CC454

Blast Hits to Contigs V2 CCall

Organisms

Project Information

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