Oall_contig40228_v2

NameOall_contig40228_v2
AccessionID7192580
Sequence
ACTAGAGATTGAACCCCAAACATTGAACCACCAAAAAGGTGGGACATGCC
ACTAGGCCGGACAGCCTTTAGTTCACATATATGCAATAGGCATTGAGAAT
GGTTCTAATTCAGCGAGGCACTAAATAAAATGTGTCACTTCTATAACTAG
TGTTCTGTGCTATAACAACAATCCAGAAATATTATTAGTATGTACCACAA
TCAGGAGAATCAAATAAAAAACTaAGCTGAACAACAAAACTTTAAGNAAC
TTAAGGNACACAGCCAACCAACCTGNAGGTTTAACAATGAAACTCAAAAC
TCGATTTATAAAGTTNCCCAAGTTATTTAGCAACTCGTTGTTTAATTTTG
CTTGCAAGTCGGCCCATGTAAATAATGTNTCTGACACCTAGTTTACACAA
ACCCATTAATCAATCCAGAAAGCAATTAGTAGAACCCAGCATTAATTCTT
AATTAAAAAAAAAAAGTAATAAATATATGCTGCTTACCTCAGGCCTATTA
GTCAGTAAGTAATATTGCCATT
Length522
Typecontig
Organism Oak

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References

Dababase Accession
GFF_source SeqManPro

ESTs in this contig

Type Feature Position
EST ROA_138082_0095_3592 0-228
EST ROB_024631_3391_1041 194-434
EST ROB_037479_3443_0544 194-434
EST ROB_081215_3419_0942 243-522

InterProScan Analysis

Analysis Date: 11-20-2009 (Interpro: Oall_contigs_v2)
SEQUENCE: Oall_contig40228_v2_2_ORF2 CRC64: 34080EE05CEEB44A LENGTH: 57 aa
No hits reported.
SEQUENCE: Oall_contig40228_v2_4_ORF2 CRC64: 2B60FE9E2C3F2953 LENGTH: 75 aa
No hits reported.
SEQUENCE: Oall_contig40228_v2_2_ORF2 CRC64: 34080EE05CEEB44A LENGTH: 57 aa
No hits reported.
SEQUENCE: Oall_contig40228_v2_4_ORF2 CRC64: 2B60FE9E2C3F2953 LENGTH: 75 aa
No hits reported.

Blast Hits to Contigs V2 AC454

Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_AC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
AC454_contig10305_v24.05529e-2190.00%
AC454_contig10305_v2
HSP 1 
Score: 81.712 bits (172), Expect = 4.05529e-21
Identity = 36/40 (90.00%), Postives = 36/40 (90.00%), Query Frame = -2
Query:  270 RCQXHYLHGPTCKQN*TTSC*ITWXTL*IEF*VSLLNLQV 389
            RCQ HYL G TCKQN*TTSC*ITW TL*IEF*VSLLNLQV
Sbjct:  159 RCQTHYLLGLTCKQN*TTSC*ITWATL*IEF*VSLLNLQV 278

HSP 2 
Score: 34.9748 bits (70), Expect = 4.05529e-21
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = -3
Query:  482 WQYYLLTNRPEVS 520
            W+YYLLTNRPEVS
Sbjct:  128 WRYYLLTNRPEVS 166

HSP 3 
Score: 86.7523 bits (183), Expect = 2.64285e-20
Identity = 36/39 (92.31%), Postives = 36/39 (92.31%), Query Frame = 2
Query:  272 PXGLTMKLKTRFIKXPKLFSNSLFNFACKSAHVNNVSDT 388
            P GLTMKLKTRFIK PKLFSNSLFNFACKSA VNNVSDT
Sbjct:  160 PGGLTMKLKTRFIKLPKLFSNSLFNFACKSAQVNNVSDT 276

HSP 4 
Score: 27.1852 bits (53), Expect = 2.64285e-20
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1
Query:  475 ICCLPQAY*SVSNIAI 522
            +C  PQAY* VSNI+I
Sbjct:  126 MCLTPQAY*LVSNISI 173

HSP 5 
Score: 78.0464 bits (164), Expect = 1.85186e-17
Identity = 35/40 (87.50%), Postives = 35/40 (87.50%), Query Frame = 1
Query:  271 TXRFNNETQNSIYKVXQVI*QLVV*FCLQVGPCK*CX*HL 390
            T RFNNETQNSIYKV QVI*QLVV*FCLQV P K*C *HL
Sbjct:  158 TWRFNNETQNSIYKVAQVI*QLVV*FCLQVSPSK*CV*HL 277

HSP 6 
Score: 26.2688 bits (51), Expect = 1.85186e-17
Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = 3
Query:  486 TSGLLVSK*YCH 521
            TSGLLVSK*Y H
Sbjct:  127 TSGLLVSK*YLH 162

HSP 7 
Score: 76.2135 bits (160), Expect = 2.23833e-16
Identity = 34/39 (87.18%), Postives = 35/39 (89.74%), Query Frame = -3
Query:  272 GVRXIIYMGRLASKIKQRVAK*LGXLYKSSFEFHC*TXR 388
            GVR IIY+G LASKIKQRVAK*LG LYKSSFEFHC*T R
Sbjct:  160 GVRHIIYLG*LASKIKQRVAK*LGQLYKSSFEFHC*TSR 276

HSP 8 
Score: 24.436 bits (47), Expect = 2.23833e-16
Identity = 10/11 (90.91%), Postives = 11/11 (100.00%), Query Frame = -1
Query:  487 GNITY*LIGLR 519
            G+ITY*LIGLR
Sbjct:  129 GDITY*LIGLR 161

HSP 9 
Score: 71.6314 bits (150), Expect = 2.39117e-13
Identity = 34/43 (79.07%), Postives = 37/43 (86.05%), Query Frame = 3
Query:  270 NLXV*Q*NSKLDL*SXPSYLATRCLILLASRPM*IMXLTPSLH 398
            +L V*Q*NSKLDL*S PSYLATRCLILLAS+P *IM LTP  +
Sbjct:  150 DLEV*Q*NSKLDL*SCPSYLATRCLILLASQPK*IMCLTPQAY 278

Blast Hits to Contigs V2 CC454

Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_CC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
CC454_contig79_v23.64137e-2087.50%
CC454_contig79_v2
HSP 1 
Score: 79.421 bits (167), Expect = 3.64137e-20
Identity = 35/40 (87.50%), Postives = 35/40 (87.50%), Query Frame = -2
Query:  270 RCQXHYLHGPTCKQN*TTSC*ITWXTL*IEF*VSLLNLQV 389
            RCQ HYL G TCKQN*TTSC*ITW TL IEF*VSLLNLQV
Sbjct: 1266 RCQTHYLLGLTCKQN*TTSC*ITWATLXIEF*VSLLNLQV 1385

HSP 2 
Score: 34.9748 bits (70), Expect = 3.64137e-20
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = -3
Query:  482 WQYYLLTNRPEVS 520
            W+YYLLTNRPEVS
Sbjct: 1378 WRYYLLTNRPEVS 1416

HSP 3 
Score: 83.5449 bits (176), Expect = 4.42365e-19
Identity = 35/39 (89.74%), Postives = 35/39 (89.74%), Query Frame = 2
Query:  272 PXGLTMKLKTRFIKXPKLFSNSLFNFACKSAHVNNVSDT 388
            P GLTMKLKTR IK PKLFSNSLFNFACKSA VNNVSDT
Sbjct: 1268 PGGLTMKLKTRXIKLPKLFSNSLFNFACKSAQVNNVSDT 1384

HSP 4 
Score: 27.1852 bits (53), Expect = 4.42365e-19
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1
Query:  475 ICCLPQAY*SVSNIAI 522
            +C  PQAY* VSNI+I
Sbjct: 1371 MCLTPQAY*LVSNISI 1418

HSP 5 
Score: 74.3807 bits (156), Expect = 4.20224e-16
Identity = 34/40 (85.00%), Postives = 34/40 (85.00%), Query Frame = 1
Query:  271 TXRFNNETQNSIYKVXQVI*QLVV*FCLQVGPCK*CX*HL 390
            T RFNNETQNSI KV QVI*QLVV*FCLQV P K*C *HL
Sbjct: 1267 TWRFNNETQNSIXKVAQVI*QLVV*FCLQVSPSK*CV*HL 1386

HSP 6 
Score: 26.2688 bits (51), Expect = 4.20224e-16
Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = 3
Query:  486 TSGLLVSK*YCH 521
            TSGLLVSK*Y H
Sbjct: 1382 TSGLLVSK*YLH 1417

HSP 7 
Score: 73.4643 bits (154), Expect = 2.71767e-15
Identity = 33/39 (84.62%), Postives = 34/39 (87.18%), Query Frame = -3
Query:  272 GVRXIIYMGRLASKIKQRVAK*LGXLYKSSFEFHC*TXR 388
            GVR IIY+G LASKIKQRVAK*LG LY SSFEFHC*T R
Sbjct: 1268 GVRHIIYLG*LASKIKQRVAK*LGQLYXSSFEFHC*TSR 1384

HSP 8 
Score: 24.436 bits (47), Expect = 2.71767e-15
Identity = 10/11 (90.91%), Postives = 11/11 (100.00%), Query Frame = -1
Query:  487 GNITY*LIGLR 519
            G+ITY*LIGLR
Sbjct: 1383 GDITY*LIGLR 1415

HSP 9 
Score: 69.3404 bits (145), Expect = 2.23821e-12
Identity = 33/43 (76.74%), Postives = 36/43 (83.72%), Query Frame = 3
Query:  270 NLXV*Q*NSKLDL*SXPSYLATRCLILLASRPM*IMXLTPSLH 398
            +L V*Q*NSKLD *S PSYLATRCLILLAS+P *IM LTP  +
Sbjct: 1266 DLEV*Q*NSKLDX*SCPSYLATRCLILLASQPK*IMCLTPQAY 1394

CC454_contig40296_v21.22938e-1676.92%
CC454_contig40296_v2
HSP 1 
Score: 77.13 bits (162), Expect = 1.22938e-16
Identity = 30/39 (76.92%), Postives = 34/39 (87.18%), Query Frame = 2
Query:  272 PXGLTMKLKTRFIKXPKLFSNSLFNFACKSAHVNNVSDT 388
            P GL MKL TR +K PKLFSNS+F+FACKSAHVNNVS+T
Sbjct:  616 PGGLAMKLNTRLVKLPKLFSNSVFSFACKSAHVNNVSET 732

HSP 2 
Score: 25.3524 bits (49), Expect = 1.22938e-16
Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = 3
Query:  486 TSGLLVSK*YCH 521
            TSGLLVSK*Y H
Sbjct:  583 TSGLLVSK*YRH 618

HSP 3 
Score: 49.6374 bits (102), Expect = 2.24453e-11
Identity = 22/39 (56.41%), Postives = 26/39 (66.67%), Query Frame = -3
Query:  272 GVRXIIYMGRLASKIKQRVAK*LGXLYKSSFEFHC*TXR 388
            G+R I+YMGRLASK K  V +* G  +  S EFHC T R
Sbjct:  616 GLRHIVYMGRLASKTKY*VTE*FGQFH*PSIEFHCQTSR 732

HSP 4 
Score: 34.9748 bits (70), Expect = 2.24453e-11
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = -3
Query:  482 WQYYLLTNRPEVS 520
            W+YYLLTNRPEVS
Sbjct:  584 WRYYLLTNRPEVS 622

Blast Hits to Contigs V2 CCall

Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_CCall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
CCall_contig1736_v27.81091e-2190.00%
CCall_contig1736_v2
HSP 1 
Score: 81.712 bits (172), Expect = 7.81091e-21
Identity = 36/40 (90.00%), Postives = 36/40 (90.00%), Query Frame = -2
Query:  270 RCQXHYLHGPTCKQN*TTSC*ITWXTL*IEF*VSLLNLQV 389
            RCQ HYL G TCKQN*TTSC*ITW TL*IEF*VSLLNLQV
Sbjct:  500 RCQTHYLLGLTCKQN*TTSC*ITWATL*IEF*VSLLNLQV 619

HSP 2 
Score: 34.9748 bits (70), Expect = 7.81091e-21
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = -3
Query:  482 WQYYLLTNRPEVS 520
            W+YYLLTNRPEVS
Sbjct:  469 WRYYLLTNRPEVS 507

HSP 3 
Score: 86.7523 bits (183), Expect = 5.08787e-20
Identity = 36/39 (92.31%), Postives = 36/39 (92.31%), Query Frame = 2
Query:  272 PXGLTMKLKTRFIKXPKLFSNSLFNFACKSAHVNNVSDT 388
            P GLTMKLKTRFIK PKLFSNSLFNFACKSA VNNVSDT
Sbjct:  501 PGGLTMKLKTRFIKLPKLFSNSLFNFACKSAQVNNVSDT 617

HSP 4 
Score: 27.1852 bits (53), Expect = 5.08787e-20
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1
Query:  475 ICCLPQAY*SVSNIAI 522
            +C  PQAY* VSNI+I
Sbjct:  467 MCLTPQAY*LVSNISI 514

HSP 5 
Score: 78.0464 bits (164), Expect = 3.55793e-17
Identity = 35/40 (87.50%), Postives = 35/40 (87.50%), Query Frame = 1
Query:  271 TXRFNNETQNSIYKVXQVI*QLVV*FCLQVGPCK*CX*HL 390
            T RFNNETQNSIYKV QVI*QLVV*FCLQV P K*C *HL
Sbjct:  499 TWRFNNETQNSIYKVAQVI*QLVV*FCLQVSPSK*CV*HL 618

HSP 6 
Score: 26.2688 bits (51), Expect = 3.55793e-17
Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = 3
Query:  486 TSGLLVSK*YCH 521
            TSGLLVSK*Y H
Sbjct:  468 TSGLLVSK*YLH 503

HSP 7 
Score: 76.2135 bits (160), Expect = 4.29654e-16
Identity = 34/39 (87.18%), Postives = 35/39 (89.74%), Query Frame = -3
Query:  272 GVRXIIYMGRLASKIKQRVAK*LGXLYKSSFEFHC*TXR 388
            GVR IIY+G LASKIKQRVAK*LG LYKSSFEFHC*T R
Sbjct:  501 GVRHIIYLG*LASKIKQRVAK*LGQLYKSSFEFHC*TSR 617

HSP 8 
Score: 24.436 bits (47), Expect = 4.29654e-16
Identity = 10/11 (90.91%), Postives = 11/11 (100.00%), Query Frame = -1
Query:  487 GNITY*LIGLR 519
            G+ITY*LIGLR
Sbjct:  470 GDITY*LIGLR 502

HSP 9 
Score: 71.6314 bits (150), Expect = 4.67761e-13
Identity = 34/43 (79.07%), Postives = 37/43 (86.05%), Query Frame = 3
Query:  270 NLXV*Q*NSKLDL*SXPSYLATRCLILLASRPM*IMXLTPSLH 398
            +L V*Q*NSKLDL*S PSYLATRCLILLAS+P *IM LTP  +
Sbjct:  491 DLEV*Q*NSKLDL*SCPSYLATRCLILLASQPK*IMCLTPQAY 619

CCall_contig39958_v21.25761e-1676.92%
CCall_contig39958_v2
HSP 1 
Score: 77.13 bits (162), Expect = 1.25761e-16
Identity = 30/39 (76.92%), Postives = 34/39 (87.18%), Query Frame = 2
Query:  272 PXGLTMKLKTRFIKXPKLFSNSLFNFACKSAHVNNVSDT 388
            P GL MKL TR +K PKLFSNS+F+FACKSAHVNNVS+T
Sbjct:  616 PGGLAMKLNTRLVKLPKLFSNSVFSFACKSAHVNNVSET 732

HSP 2 
Score: 25.3524 bits (49), Expect = 1.25761e-16
Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = 3
Query:  486 TSGLLVSK*YCH 521
            TSGLLVSK*Y H
Sbjct:  583 TSGLLVSK*YRH 618

HSP 3 
Score: 49.6374 bits (102), Expect = 2.29617e-11
Identity = 22/39 (56.41%), Postives = 26/39 (66.67%), Query Frame = -3
Query:  272 GVRXIIYMGRLASKIKQRVAK*LGXLYKSSFEFHC*TXR 388
            G+R I+YMGRLASK K  V +* G  +  S EFHC T R
Sbjct:  616 GLRHIVYMGRLASKTKY*VTE*FGQFH*PSIEFHCQTSR 732

HSP 4 
Score: 34.9748 bits (70), Expect = 2.29617e-11
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = -3
Query:  482 WQYYLLTNRPEVS 520
            W+YYLLTNRPEVS
Sbjct:  584 WRYYLLTNRPEVS 622

Blast Hits to Contig V2 RO454

Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_RO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
RO454_contig28020_v29.21674e-111100.00%
RO454_contig28020_v2
HSP 1 
Score: 395.127 bits (856), Expect = 9.21674e-111
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1
Query:    1 TRD*TPNIEPPKRWDMPLGRTAFSSHICNRH*EWF*FSEALNKMCHFYN*CSVL*QQSRNIISMYHNQENQIKN*AEQQNFKXLKXHSQPTXRFNNETQNSIYKVXQVI*QLVV*FCLQVGPCK*CX*HLVYTNPLINPESN**NPALILN*KKKVINICCLPQAY*SVSNIAI 522
            TRD*TPNIEPPKRWDMPLGRTAFSSHICNRH*EWF*FSEALNKMCHFYN*CSVL*QQSRNIISMYHNQENQIKN*AEQQNFKXLKXHSQPTXRFNNETQNSIYKVXQVI*QLVV*FCLQVGPCK*CX*HLVYTNPLINPESN**NPALILN*KKKVINICCLPQAY*SVSNIAI
Sbjct:    1 TRD*TPNIEPPKRWDMPLGRTAFSSHICNRH*EWF*FSEALNKMCHFYN*CSVL*QQSRNIISMYHNQENQIKN*AEQQNFKXLKXHSQPTXRFNNETQNSIYKVXQVI*QLVV*FCLQVGPCK*CX*HLVYTNPLINPESN**NPALILN*KKKVINICCLPQAY*SVSNIAI 522

HSP 2 
Score: 357.554 bits (774), Expect = 1.89883e-99
Identity = 162/173 (93.64%), Postives = 162/173 (93.64%), Query Frame = -3
Query:    2 WQYYLLTNRPEVSSIYXXXXXXXXXXXLGSTNCFLD*LMGLCKLGVRXIIYMGRLASKIKQRVAK*LGXLYKSSFEFHC*TXRLVGCVP*VX*SFVVQLSFLFDSPDCGTY**YFWIVVIAQNTSYRSDTFYLVPR*IRTILNAYCIYVN*RLSGLVACPTFLVVQCLGFNL* 520
            WQYYLLTNRPEVSSIY           LGSTNCFLD*LMGLCKLGVRXIIYMGRLASKIKQRVAK*LGXLYKSSFEFHC*TXRLVGCVP*VX*SFVVQLSFLFDSPDCGTY**YFWIVVIAQNTSYRSDTFYLVPR*IRTILNAYCIYVN*RLSGLVACPTFLVVQCLGFNL*
Sbjct:    2 WQYYLLTNRPEVSSIYLLLFFFN*ELMLGSTNCFLD*LMGLCKLGVRXIIYMGRLASKIKQRVAK*LGXLYKSSFEFHC*TXRLVGCVP*VX*SFVVQLSFLFDSPDCGTY**YFWIVVIAQNTSYRSDTFYLVPR*IRTILNAYCIYVN*RLSGLVACPTFLVVQCLGFNL* 520

HSP 3 
Score: 338.309 bits (732), Expect = 1.17073e-93
Identity = 163/173 (94.22%), Postives = 163/173 (94.22%), Query Frame = 3
Query:    3 *RLNPKH*TTKKVGHATRPDSL*FTYMQ*ALRMVLIQRGTK*NVSLL*LVFCAITTIQKYY*YVPQSGESNKKLS*TTKL*XT*GTQPTNLXV*Q*NSKLDL*SXPSYLATRCLILLASRPM*IMXLTPSLHKPINQSRKQLVEPSIXXXXXXXXXXYMLLTSGLLVSK*YCH 521
            *RLNPKH*TTKKVGHATRPDSL*FTYMQ*ALRMVLIQRGTK*NVSLL*LVFCAITTIQKYY*YVPQSGESNKKLS*TTKL*XT*GTQPTNLXV*Q*NSKLDL*SXPSYLATRCLILLASRPM*IMXLTPSLHKPINQSRKQLVEPSI          YMLLTSGLLVSK*YCH
Sbjct:    3 *RLNPKH*TTKKVGHATRPDSL*FTYMQ*ALRMVLIQRGTK*NVSLL*LVFCAITTIQKYY*YVPQSGESNKKLS*TTKL*XT*GTQPTNLXV*Q*NSKLDL*SXPSYLATRCLILLASRPM*IMXLTPSLHKPINQSRKQLVEPSINS*LKKKSNKYMLLTSGLLVSK*YCH 521

HSP 4 
Score: 189.849 bits (408), Expect = 2.39338e-91
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = -2
Query:  264 MAILLTD**A*GKQHIFITFFF*LRINAGFY*LLSGLINGFV*TRCQXHYLHGPTCKQN*TTSC*ITWXTL*IEF*VSLLNLQVGW 521
            MAILLTD**A*GKQHIFITFFF*LRINAGFY*LLSGLINGFV*TRCQXHYLHGPTCKQN*TTSC*ITWXTL*IEF*VSLLNLQVGW
Sbjct:  264 MAILLTD**A*GKQHIFITFFF*LRINAGFY*LLSGLINGFV*TRCQXHYLHGPTCKQN*TTSC*ITWXTL*IEF*VSLLNLQVGW 521

HSP 5 
Score: 161.899 bits (347), Expect = 2.39338e-91
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = -1
Query:    1 HTNNISGLLL*HRTLVIEVTHFI*CLAELEPFSMPIAYM*TKGCPA*WHVPPFWWFNVWGSISS 192
            HTNNISGLLL*HRTLVIEVTHFI*CLAELEPFSMPIAYM*TKGCPA*WHVPPFWWFNVWGSISS
Sbjct:    1 HTNNISGLLL*HRTLVIEVTHFI*CLAELEPFSMPIAYM*TKGCPA*WHVPPFWWFNVWGSISS 192

HSP 6 
Score: 171.521 bits (368), Expect = 1.74074e-84
Identity = 80/86 (93.02%), Postives = 80/86 (93.02%), Query Frame = 2
Query:  263 ANQPXGLTMKLKTRFIKXPKLFSNSLFNFACKSAHVNNVSDT*FTQTH*SIQKAISRTQH*FLIXXXXXXIYAAYLRPISQ*VILP 520
            ANQPXGLTMKLKTRFIKXPKLFSNSLFNFACKSAHVNNVSDT*FTQTH*SIQKAISRTQH*FLI      IYAAYLRPISQ*VILP
Sbjct:  263 ANQPXGLTMKLKTRFIKXPKLFSNSLFNFACKSAHVNNVSDT*FTQTH*SIQKAISRTQH*FLIKKKK**IYAAYLRPISQ*VILP 520

HSP 7 
Score: 157.316 bits (337), Expect = 1.74074e-84
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 2
Query:    2 LEIEPQTLNHQKGGTCH*AGQPLVHIYAIGIENGSNSARH*IKCVTSITSVLCYNNNPEILLVC 193
            LEIEPQTLNHQKGGTCH*AGQPLVHIYAIGIENGSNSARH*IKCVTSITSVLCYNNNPEILLVC
Sbjct:    2 LEIEPQTLNHQKGGTCH*AGQPLVHIYAIGIENGSNSARH*IKCVTSITSVLCYNNNPEILLVC 193

HSP 8 
Score: 159.149 bits (341), Expect = 2.17733e-76
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = -2
Query:    3 *LWYILIIFLDCCYSTEH*L*K*HILFSASLN*NHSQCLLHICELKAVRPSGMSHLFGGSMFGVQSL 203
            *LWYILIIFLDCCYSTEH*L*K*HILFSASLN*NHSQCLLHICELKAVRPSGMSHLFGGSMFGVQSL
Sbjct:    3 *LWYILIIFLDCCYSTEH*L*K*HILFSASLN*NHSQCLLHICELKAVRPSGMSHLFGGSMFGVQSL 203

HSP 9 
Score: 131.657 bits (281), Expect = 2.17733e-76
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = -1
Query:  358 NGNITY*LIGLR*AAYIYYFFFLIKN*CWVLLIAFWID*WVCVN*VSXTLFTWAD 522
            NGNITY*LIGLR*AAYIYYFFFLIKN*CWVLLIAFWID*WVCVN*VSXTLFTWAD
Sbjct:  358 NGNITY*LIGLR*AAYIYYFFFLIKN*CWVLLIAFWID*WVCVN*VSXTLFTWAD 522

HSP 10 
Score: 29.9345 bits (59), Expect = 2.17733e-76
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = -1
Query:  268 RVLSFIVKPXGW 303
            RVLSFIVKPXGW
Sbjct:  268 RVLSFIVKPXGW 303

RO454_contig10673_v27.84645e-2290.00%
RO454_contig10673_v2
HSP 1 
Score: 88.127 bits (186), Expect = 7.84645e-22
Identity = 36/40 (90.00%), Postives = 37/40 (92.50%), Query Frame = 2
Query:  269 QPXGLTMKLKTRFIKXPKLFSNSLFNFACKSAHVNNVSDT 388
            +P GLTMKLKTRFIK PKLFSN LFNFACKSAHVNNVSDT
Sbjct:  676 RPGGLTMKLKTRFIKLPKLFSNLLFNFACKSAHVNNVSDT 795

HSP 2 
Score: 30.8509 bits (61), Expect = 7.84645e-22
Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 1
Query:  475 ICCLPQAY*SVSNIAI 522
            +C +PQAY*SV NIAI
Sbjct:  782 MCLIPQAY*SVGNIAI 829

HSP 3 
Score: 79.421 bits (167), Expect = 1.78501e-20
Identity = 35/40 (87.50%), Postives = 35/40 (87.50%), Query Frame = -2
Query:  270 RCQXHYLHGPTCKQN*TTSC*ITWXTL*IEF*VSLLNLQV 389
            R Q HYLHG TCKQN*T SC*ITW TL*IEF*VSLLNLQV
Sbjct:  677 RYQTHYLHGLTCKQN*TASC*ITWATL*IEF*VSLLNLQV 796

HSP 4 
Score: 34.9748 bits (70), Expect = 1.78501e-20
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = -3
Query:  482 WQYYLLTNRPEVS 520
            W+YYLLTNRPEVS
Sbjct:  789 WRYYLLTNRPEVS 827

HSP 5 
Score: 78.0464 bits (164), Expect = 2.3325e-17
Identity = 34/40 (85.00%), Postives = 35/40 (87.50%), Query Frame = 1
Query:  271 TXRFNNETQNSIYKVXQVI*QLVV*FCLQVGPCK*CX*HL 390
            T RFNNETQNSIYKV QVI*QL V*FCLQV PCK*C *+L
Sbjct:  678 TWRFNNETQNSIYKVAQVI*QLAV*FCLQVSPCK*CV*YL 797

HSP 6 
Score: 25.8106 bits (50), Expect = 2.3325e-17
Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = 2
Query:  485 YLRPISQ*VILP 520
            YLRPISQ*VI P
Sbjct:  792 YLRPISQ*VISP 827

HSP 7 
Score: 75.2971 bits (158), Expect = 2.81749e-16
Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = -3
Query:  272 GVRXIIYMGRLASKIKQRVAK*LGXLYKSSFEFHC*TXR 388
            G+R IIYMG LASKIKQ+VAK*LG LYKSSFEFHC*T R
Sbjct:  679 GIRHIIYMG*LASKIKQQVAK*LGQLYKSSFEFHC*TSR 795

HSP 8 
Score: 24.8942 bits (48), Expect = 2.81749e-16
Identity = 13/16 (81.25%), Postives = 14/16 (87.50%), Query Frame = -2
Query:  474 MAILLTD**A*GKQHI 521
            MAIL TD**A*G +HI
Sbjct:  781 MAILPTD**A*GIRHI 828

HSP 9 
Score: 67.9658 bits (142), Expect = 7.58926e-14
Identity = 33/43 (76.74%), Postives = 36/43 (83.72%), Query Frame = 3
Query:  270 NLXV*Q*NSKLDL*SXPSYLATRCLILLASRPM*IMXLTPSLH 398
            +L V*Q*NSKLDL*S PSYLAT CLILLAS+PM*IM L P  +
Sbjct:  677 DLEV*Q*NSKLDL*SCPSYLATCCLILLASQPM*IMCLIPQAY 805

HSP 10 
Score: 23.9778 bits (46), Expect = 7.58926e-14
Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 3
Query:  486 TSGLLVSK*YCH 521
            TSGLLVS+*Y H
Sbjct:  793 TSGLLVSR*YRH 828

RO454_contig672_v23.04986e-1377.78%
RO454_contig672_v2
HSP 1 
Score: 71.1732 bits (149), Expect = 3.04986e-13
Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 2
Query:  272 PXGLTMKLKTRFIKXPKLFSNSLFNFACKSAHVNNV 379
            P GL MKL TR +K PKLFSNS+F+FACKSAHVNNV
Sbjct:    1 PGGLAMKLNTRLMKLPKLFSNSVFSFACKSAHVNNV 108

Blast Hits to Contigs V2 WO454

Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_WO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
WO454_contig2047_v25.10161e-1588.57%
WO454_contig2047_v2
HSP 1 
Score: 76.6717 bits (161), Expect = 5.10161e-15
Identity = 31/35 (88.57%), Postives = 32/35 (91.43%), Query Frame = 2
Query:  269 QPXGLTMKLKTRFIKXPKLFSNSLFNFACKSAHVN 373
            +P GLTMKLKTRFIK PKLFSN LFNFACKSAHVN
Sbjct:    2 RPGGLTMKLKTRFIKLPKLFSNLLFNFACKSAHVN 106

HSP 2 
Score: 72.5479 bits (152), Expect = 8.82805e-14
Identity = 32/35 (91.43%), Postives = 32/35 (91.43%), Query Frame = -2
Query:  270 YLHGPTCKQN*TTSC*ITWXTL*IEF*VSLLNLQV 374
            YLHG TCKQN*T SC*ITW TL*IEF*VSLLNLQV
Sbjct:    1 YLHGLTCKQN*TASC*ITWATL*IEF*VSLLNLQV 105

HSP 3 
Score: 70.715 bits (148), Expect = 3.16852e-13
Identity = 30/34 (88.24%), Postives = 30/34 (88.24%), Query Frame = 1
Query:  271 TXRFNNETQNSIYKVXQVI*QLVV*FCLQVGPCK 372
            T RFNNETQNSIYKV QVI*QL V*FCLQV PCK
Sbjct:    3 TWRFNNETQNSIYKVAQVI*QLAV*FCLQVSPCK 104

HSP 4 
Score: 67.5076 bits (141), Expect = 2.90499e-12
Identity = 30/34 (88.24%), Postives = 31/34 (91.18%), Query Frame = -3
Query:  272 IYMGRLASKIKQRVAK*LGXLYKSSFEFHC*TXR 373
            IYMG LASKIKQ+VAK*LG LYKSSFEFHC*T R
Sbjct:    2 IYMG*LASKIKQQVAK*LGQLYKSSFEFHC*TSR 103

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