Oall_contig40211_v2
| Name | Oall_contig40211_v2 |
|---|---|
| Accession | ID7192409 |
| Sequence | ATTGTTATAATTATACTACAGGTCAGCGAAGCTGCAATACCTTAGCGGAC |
| Length | 962 |
| Type | contig |
| Organism | Oak |
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References
| Dababase | Accession |
|---|---|
| GFF_source | SeqManPro |
ESTs in this contig
| Type | Feature | Position |
|---|---|---|
| EST | ROA_116403_0646_1717 | 0-247 |
| EST | ROB_070412_3508_2266 | 187-430 |
| EST | ROB_097123_3372_2264 | 189-430 |
| EST | WOA_074705_0353_1336 | 219-457 |
| EST | ROA_123145_0226_2963 | 365-609 |
| EST | ROA_128158_0603_0641 | 530-785 |
| EST | ROA_086325_0406_0563 | 575-833 |
| EST | WOA_122498_0882_1268 | 648-898 |
| EST | WOA_031907_0692_3127 | 742-962 |
InterProScan Analysis
Analysis Date: 11-20-2009
(Interpro: Oall_contigs_v2)
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Blast Hits to Contigs V2 AC454
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_AC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
AC454_contig34047_v2 | 1.26395e-43 | 93.48% | ||
AC454_contig34047_v2 | ||||
HSP 1 Score: 115.619 bits (246), Expect = 1.26395e-43 Query: 233 RRMGFCIQCCRSWSSTCCWVRRXDIYEEVLNIVKHVNSINEFSNFS 370 HSP 2 Score: 77.5882 bits (163), Expect = 1.26395e-43 Query: 136 FQILACLI*S*SRGPKWNWL*GHVLCLIPVLVEPYT* 246 HSP 3 Score: 106.914 bits (227), Expect = 4.45292e-43 Query: 238 NLKTHL*N*HVSQYLGPLHICXYA*PSNKCCSSCDSTVCRSPCV 369 HSP 4 Score: 84.4613 bits (178), Expect = 4.45292e-43 Query: 136 LCIRFYENRYQAQDMPSQPIPFWPSTLGSNQTC* 237 HSP 5 Score: 99.5822 bits (211), Expect = 1.05175e-38 Query: 237 QTHGLLHTVLSQLEQHLLLG*AX*HI*RGPKYCETC*FYK*VFKF 371 HSP 6 Score: 77.13 bits (162), Expect = 1.05175e-38 Query: 135 FKF*HV*FDPRVEGQNGIGCEGMSCA*YLFS*NRIHN 245 HSP 7 Score: 83.0867 bits (175), Expect = 1.46051e-32 Query: 137 YVYGSTRTGIKHKTCPHSQFHFGPLL*DQIRHAK 238 HSP 8 Score: 73.0061 bits (153), Expect = 1.46051e-32 Query: 237 KFENSFIELTCFTIFRTSSYMSXXXXXXXXXXXXXXHCMQKPMRL 371 HSP 9 Score: 67.0494 bits (140), Expect = 4.81298e-20 Query: 135 IMYTVLREQVSSTRHALTANSILALYSRIKSDMLKFE 245 HSP 10 Score: 46.8882 bits (96), Expect = 4.81298e-20 Query: 239 I*KLIYRINMFHNI*DLFIYV 301 HSP 11 Score: 69.3404 bits (145), Expect = 5.84967e-19 Query: 137 FSMSDLILE*RAKMELAVRACLVLDTCSRRTVYI 238 HSP 12 Score: 40.9315 bits (83), Expect = 5.84967e-19 Query: 238 TYMKRS*IL*NMLIL*MSFQI 300 | ||||
AC454_contig24380_v2 | 4.7726e-31 | 97.67% | ||
AC454_contig24380_v2 | ||||
HSP 1 Score: 101.873 bits (216), Expect = 4.7726e-31 Query: 577 SAPPNTFAFKIQDKKGRMHRFTCETHSLADLIAAIIQRVGDDI 705 HSP 2 Score: 48.721 bits (100), Expect = 4.7726e-31 Query: 697 SLKLASEGGTETGRALSYPLSAP 765 HSP 3 Score: 101.873 bits (216), Expect = 8.04453e-30 Query: 577 NVIPHPLNDRSYKICQTMCLASKPMHPALLILDFKSKCIRGG*Q 708 HSP 4 Score: 44.5971 bits (91), Expect = 8.04453e-30 Query: 698 GADKG*ESARPVSVPPSEANFK 763 HSP 5 Score: 97.7493 bits (207), Expect = 5.83241e-27 Query: 576 QPPLIHLLLKSKIRRAGCIGLLARHIVWQIL*LRSFRGWGMTL 704 HSP 6 Score: 39.0986 bits (79), Expect = 5.83241e-27 Query: 681 *SWLQREEQRQDEHFPILCQPPLIHLL 761 HSP 7 Score: 97.2911 bits (206), Expect = 7.15593e-26 Query: 575 SMSSPTL*MIAAIRSAKLCVSQVNLCILPFLSWILKANVLGGAD 706 HSP 8 Score: 35.8912 bits (72), Expect = 7.15593e-26 Query: 699 GLTKDRKVLVLSLFLPLKPTLR 764 HSP 9 Score: 94.5419 bits (200), Expect = 9.78888e-26 Query: 575 VSPP*YICF*NPR*EGQDA*VYLRDT*FGRSYSCDHSEGGG*H* 706 HSP 10 Score: 38.1822 bits (77), Expect = 9.78888e-26 Query: 698 KVGFRGRNRDRTSTFLSFVSP 760 HSP 11 Score: 95.0001 bits (201), Expect = 4.5356e-20 Query: 576 QCHPPPSE*SQL*DLPNYVSRK*TYASCPSYLGF*KQMY*GGLT 707 | ||||
AC454_contig9939_v2 | 6.74885e-13 | 68.29% | ||
AC454_contig9939_v2 | ||||
HSP 1 Score: 71.1732 bits (149), Expect = 6.74885e-13 Query: 439 PQILYEDEDQDKVVLASDSDLATAVDHARSAGWKGLRLHLD 561 | ||||
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Blast Hits to Contigs V2 CC454
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_CC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
CC454_contig41743_v2 | 2.16833e-143 | 89.24% | ||
CC454_contig41743_v2 | ||||
HSP 1 Score: 337.851 bits (731), Expect = 2.16833e-143 Query: 233 VSPP*YICF*NPR*EGQDA*VYLRDT*FGRSYSCDHSEGGG*H*PPQTTSDSV*R*RPG*SCTSIG**SCNCRGPCKVSWLEGLEIAFRLFRKTWSWESLXFGSXGLC*NTXRRMGFCIQCCRSWSSTCCWVRRXDIYEEVLNIVKHVNSINEFSNFS 706 HSP 2 Score: 134.406 bits (287), Expect = 2.16833e-143 Query: 698 GYCWHKY*SNKQYDAKVLGFCHGLNL**G*RRCTK*RFLKVGFRGRNRDRTSTFLSFVSP 877 HSP 3 Score: 74.8389 bits (157), Expect = 2.16833e-143 Query: 142 FQILACLI*S*SRGPKWNWL*GHVLCLIPVLVEPY 246 HSP 4 Score: 323.646 bits (700), Expect = 1.70927e-137 Query: 237 QPPLIHLLLKSKIRRAGCIGLLARHIVWQIL*LRSFRGWGMTLTPTNYLRFCMKMKTRIKLY*HRIVILQLPWTMQGQLVGRA*DCI*TIQENVVVGELTVRELWTXLKHXQTHGLLHTVLSQLEQHLLLG*AX*HI*RGPKYCETC*FYK*VFKF 704 HSP 5 Score: 133.031 bits (284), Expect = 1.70927e-137 Query: 697 GTAGISTEATNSMMQKFWDSAMVLTSNEDEEDARSEGSLKLASEGGTETGRALSYPLSAP 876 HSP 6 Score: 70.715 bits (148), Expect = 1.70927e-137 Query: 144 FKF*HV*FDPRVEGQNGIGCEGMSCA*YLFS*NR 245 HSP 7 Score: 298.903 bits (646), Expect = 1.58305e-126 Query: 237 KFENSFIELTCFTIFRTSSYMSXXXXXXXXXXXXXXHCMQKPMRLXVFQXSPXLPNXKLSHDHVFLNSLNAISSPSNQLTLHGPRQLQDHYPMLVQLYPGLHLHTESEVVCGGQCHPPPSE*SQL*DLPNYVSRK*TYASCPSYLGF*KQMY*GGLT 707 HSP 8 Score: 113.787 bits (242), Expect = 1.58305e-126 Query: 698 GADKG*ESARPVSVPPSEANFKEPSLRAXXXXXLEVKTMAESQNFCIILFVASVLMPAVP 877 HSP 9 Score: 78.0464 bits (164), Expect = 1.58305e-126 Query: 143 YGSTRTGIKHKTCPHSQFHFGPLL*DQIRHAK 238 HSP 10 Score: 195.348 bits (420), Expect = 2.38346e-120 Query: 436 IV*MQSQALPTS*PCMVHGSCKITIRC*YNFILVFIFIQNLR*FVGVNVIPHPLNDRSYKICQTMCLASKPMHPALLILDFKSKCIRGG*Q 708 HSP 11 Score: 114.245 bits (243), Expect = 2.38346e-120 Query: 238 NLKTHL*N*HVSQYLGPLHICXYA*PSNKCCSSCDSTVCRSPCVCMCF 381 HSP 12 Score: 101.873 bits (216), Expect = 2.38346e-120 Query: 699 GLTKDRKVLVLSLFLPLKPTLRNLHFVHLLHPH*RLRPWQNPRTFAS 839 HSP 13 Score: 77.5882 bits (163), Expect = 2.38346e-120 Query: 142 IRFYENRYQAQDMPSQPIPFWPSTLGSNQTC* 237 HSP 14 Score: 209.094 bits (450), Expect = 2.90271e-102 Query: 439 SAPPNTFAFKIQDKKGRMHRFTCETHSLADLIAAIIQRVGDDIDPHKLPQILYEDEDQDKVVLASDSDLATAVDHARSAGWKGLRLHLD 705 HSP 15 Score: 121.576 bits (259), Expect = 2.90271e-102 Query: 681 VLLA*VLKQQTV*CKSSGILPWS*PLMRMKKMHEVKVP*SWLQREEQRQDEHFPILCQPPLIHLL 875 HSP 16 Score: 64.3001 bits (134), Expect = 2.90271e-102 Query: 143 FSMSDLILE*RAKMELAVRACLVLDTCSRRTV 238 HSP 17 Score: 38.1822 bits (77), Expect = 2.90271e-102 Query: 238 TYMKRS*IL*NMLIL*MSFQI 300 HSP 18 Score: 191.224 bits (411), Expect = 2.66644e-91 Query: 368 SXCVSAXSXAPEX*ALPRPRFPE*SKCNLKPFQPADLAWSTAVARXXXXXXXXXXXXXXXYRI*GSLWGSMSSPTL*MIAAIRSAKLCVSQVNLCILPFLSWILKANVLGGAD 706 HSP 19 Score: 94.0837 bits (199), Expect = 2.66644e-91 Query: 763 GTFTSCIFFILIRG*DHGRIPELLHHTVCCFSTYASST 876 HSP 20 Score: 61.0927 bits (127), Expect = 2.66644e-91 Query: 144 TVLREQVSSTRHALTANSILALYSRIKSDMLKFE 245 HSP 21 Score: 45.0554 bits (92), Expect = 2.66644e-91 Query: 239 I*KLIYRINMFHNI*DLFIYV 301 | ||||
CC454_contig43450_v2 | 5.95814e-38 | 68.29% | ||
CC454_contig43450_v2 | ||||
HSP 1 Score: 71.1732 bits (149), Expect = 5.95814e-38 Query: 439 PQILYEDEDQDKVVLASDSDLATAVDHARSAGWKGLRLHLD 561 HSP 2 Score: 70.2568 bits (147), Expect = 5.95814e-38 Query: 574 GTETGRALSYPLSAPPNTFAFKIQDKKGRMHRFTCETHSLADLIAAIIQRVGDDID 741 HSP 3 Score: 51.9285 bits (107), Expect = 5.95814e-38 Query: 790 LQITHAAVSTVGGTAGISTEATNSMMQKFWDSAMVLTSNED 912 HSP 4 Score: 43.2225 bits (88), Expect = 1.6115e-17 Query: 438 SLNAISSPSNQLTLHGPRQLQDHYPMLVQLYPGLHLHTESE 560 HSP 5 Score: 42.3061 bits (86), Expect = 1.6115e-17 Query: 815 AESQNFCIILFVASVLMPAVPPTVDTAA*VIC 910 HSP 6 Score: 38.1822 bits (77), Expect = 1.6115e-17 Query: 575 SMSSPTL*MIAAIRSAKLCVSQVNLCILPFLSWILKANVLGGADKG*ESARPVSVPPSEAN 757 | ||||
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Blast Hits to Contigs V2 CCall
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_CCall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
CCall_contig41276_v2 | 2.25266e-143 | 89.24% | ||
CCall_contig41276_v2 | ||||
HSP 1 Score: 337.851 bits (731), Expect = 2.25266e-143 Query: 233 VSPP*YICF*NPR*EGQDA*VYLRDT*FGRSYSCDHSEGGG*H*PPQTTSDSV*R*RPG*SCTSIG**SCNCRGPCKVSWLEGLEIAFRLFRKTWSWESLXFGSXGLC*NTXRRMGFCIQCCRSWSSTCCWVRRXDIYEEVLNIVKHVNSINEFSNFS 706 HSP 2 Score: 134.406 bits (287), Expect = 2.25266e-143 Query: 698 GYCWHKY*SNKQYDAKVLGFCHGLNL**G*RRCTK*RFLKVGFRGRNRDRTSTFLSFVSP 877 HSP 3 Score: 74.8389 bits (157), Expect = 2.25266e-143 Query: 142 FQILACLI*S*SRGPKWNWL*GHVLCLIPVLVEPY 246 HSP 4 Score: 323.646 bits (700), Expect = 1.77574e-137 Query: 237 QPPLIHLLLKSKIRRAGCIGLLARHIVWQIL*LRSFRGWGMTLTPTNYLRFCMKMKTRIKLY*HRIVILQLPWTMQGQLVGRA*DCI*TIQENVVVGELTVRELWTXLKHXQTHGLLHTVLSQLEQHLLLG*AX*HI*RGPKYCETC*FYK*VFKF 704 HSP 5 Score: 133.031 bits (284), Expect = 1.77574e-137 Query: 697 GTAGISTEATNSMMQKFWDSAMVLTSNEDEEDARSEGSLKLASEGGTETGRALSYPLSAP 876 HSP 6 Score: 70.715 bits (148), Expect = 1.77574e-137 Query: 144 FKF*HV*FDPRVEGQNGIGCEGMSCA*YLFS*NR 245 HSP 7 Score: 298.903 bits (646), Expect = 1.64462e-126 Query: 237 KFENSFIELTCFTIFRTSSYMSXXXXXXXXXXXXXXHCMQKPMRLXVFQXSPXLPNXKLSHDHVFLNSLNAISSPSNQLTLHGPRQLQDHYPMLVQLYPGLHLHTESEVVCGGQCHPPPSE*SQL*DLPNYVSRK*TYASCPSYLGF*KQMY*GGLT 707 HSP 8 Score: 113.787 bits (242), Expect = 1.64462e-126 Query: 698 GADKG*ESARPVSVPPSEANFKEPSLRAXXXXXLEVKTMAESQNFCIILFVASVLMPAVP 877 HSP 9 Score: 78.0464 bits (164), Expect = 1.64462e-126 Query: 143 YGSTRTGIKHKTCPHSQFHFGPLL*DQIRHAK 238 HSP 10 Score: 195.348 bits (420), Expect = 2.47616e-120 Query: 436 IV*MQSQALPTS*PCMVHGSCKITIRC*YNFILVFIFIQNLR*FVGVNVIPHPLNDRSYKICQTMCLASKPMHPALLILDFKSKCIRGG*Q 708 HSP 11 Score: 114.245 bits (243), Expect = 2.47616e-120 Query: 238 NLKTHL*N*HVSQYLGPLHICXYA*PSNKCCSSCDSTVCRSPCVCMCF 381 HSP 12 Score: 101.873 bits (216), Expect = 2.47616e-120 Query: 699 GLTKDRKVLVLSLFLPLKPTLRNLHFVHLLHPH*RLRPWQNPRTFAS 839 HSP 13 Score: 77.5882 bits (163), Expect = 2.47616e-120 Query: 142 IRFYENRYQAQDMPSQPIPFWPSTLGSNQTC* 237 HSP 14 Score: 209.094 bits (450), Expect = 3.0156e-102 Query: 439 SAPPNTFAFKIQDKKGRMHRFTCETHSLADLIAAIIQRVGDDIDPHKLPQILYEDEDQDKVVLASDSDLATAVDHARSAGWKGLRLHLD 705 HSP 15 Score: 121.576 bits (259), Expect = 3.0156e-102 Query: 681 VLLA*VLKQQTV*CKSSGILPWS*PLMRMKKMHEVKVP*SWLQREEQRQDEHFPILCQPPLIHLL 875 HSP 16 Score: 64.3001 bits (134), Expect = 3.0156e-102 Query: 143 FSMSDLILE*RAKMELAVRACLVLDTCSRRTV 238 HSP 17 Score: 38.1822 bits (77), Expect = 3.0156e-102 Query: 238 TYMKRS*IL*NMLIL*MSFQI 300 HSP 18 Score: 191.224 bits (411), Expect = 2.77014e-91 Query: 368 SXCVSAXSXAPEX*ALPRPRFPE*SKCNLKPFQPADLAWSTAVARXXXXXXXXXXXXXXXYRI*GSLWGSMSSPTL*MIAAIRSAKLCVSQVNLCILPFLSWILKANVLGGAD 706 HSP 19 Score: 94.0837 bits (199), Expect = 2.77014e-91 Query: 763 GTFTSCIFFILIRG*DHGRIPELLHHTVCCFSTYASST 876 HSP 20 Score: 61.0927 bits (127), Expect = 2.77014e-91 Query: 144 TVLREQVSSTRHALTANSILALYSRIKSDMLKFE 245 HSP 21 Score: 45.0554 bits (92), Expect = 2.77014e-91 Query: 239 I*KLIYRINMFHNI*DLFIYV 301 | ||||
CCall_contig20213_v2 | 6.11358e-38 | 68.29% | ||
CCall_contig20213_v2 | ||||
HSP 1 Score: 71.1732 bits (149), Expect = 6.11358e-38 Query: 439 PQILYEDEDQDKVVLASDSDLATAVDHARSAGWKGLRLHLD 561 HSP 2 Score: 70.2568 bits (147), Expect = 6.11358e-38 Query: 574 GTETGRALSYPLSAPPNTFAFKIQDKKGRMHRFTCETHSLADLIAAIIQRVGDDID 741 HSP 3 Score: 51.9285 bits (107), Expect = 6.11358e-38 Query: 790 LQITHAAVSTVGGTAGISTEATNSMMQKFWDSAMVLTSNED 912 HSP 4 Score: 43.2225 bits (88), Expect = 1.63612e-17 Query: 438 SLNAISSPSNQLTLHGPRQLQDHYPMLVQLYPGLHLHTESE 560 HSP 5 Score: 42.3061 bits (86), Expect = 1.63612e-17 Query: 815 AESQNFCIILFVASVLMPAVPPTVDTAA*VIC 910 HSP 6 Score: 38.1822 bits (77), Expect = 1.63612e-17 Query: 575 SMSSPTL*MIAAIRSAKLCVSQVNLCILPFLSWILKANVLGGADKG*ESARPVSVPPSEAN 757 | ||||
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Blast Hits to MedicagoProt
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_MedicagoProt_20080227)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
IMGA|CT954252_14.4 Octico | 1.64324e-52 | 60.76% | ||
apeptide/Phox/Bem1p; CBS chr03_pseudomolecule_IMGAG_V2 28042379-28050261 E EGN_Mt071002 20080227 | ||||
HSP 1 Score: 202.601 bits (514), Expect = 1.64324e-52 Query: 439 LQITHAAVSTVGGTAGISTEATNSMMQKFWDSAMVLTSNEDEEDARSEGSLKLASEGGTETGRALSYPLSAPPNTFAFKIQDKKGRMHRFTCETHSLADLIAAIIQRVGDDIDPHKLPQILYEDEDQDKVVLASDSDLATAVDHARSAGWKGLRLHLD 912 | ||||
IMGA|AC152348_29.4 Octico | 8.47867e-33 | 46.84% | ||
apeptide/Phox/Bem1p; CBS chr04_pseudomolecule_IMGAG_V2 33998045-34006475 F EGN_Mt071002 20080227 | ||||
HSP 1 Score: 137.117 bits (344), Expect = 8.47867e-33 Query: 439 LQITHAAVSTVGGTAGISTEATNSMMQKFWDSAMVLTSNEDEEDARSEGSLKLASEGGTETGRALSYPLSAPPNTFAFKIQDKKGRMHRFTCETHSLADLIAAIIQRVGDDIDPHKLPQILYEDEDQDKVVLASDSDLATAVDHARSAGWKGLRLHLD 912 | ||||
IMGA|CT009488_20.4 Octico | 8.21226e-28 | 42.14% | ||
apeptide/Phox/Bem1p; CBS chr03_pseudomolecule_IMGAG_V2 35597428-35604242 E EGN_Mt071002 20080227 | ||||
HSP 1 Score: 120.553 bits (301), Expect = 8.21226e-28 Query: 439 LQITHAAVSTV-GGTAGISTEATNSMMQKFWDSAMVLTSNEDEEDARSEGSLKLASEGGTETGRALSYPLSAPPNTFAFKIQDKKGRMHRFTCETHSLADLIAAIIQRVGDDIDPHKLPQILYEDEDQDKVVLASDSDLATAVDHARSAGWKGLRLHLD 912 | ||||
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Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_PopulusProt_JamboreeModels1_1)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
fgenesh4_pm.C_LG_XV000301 | 3.76966e-59 | 70.89% | ||
jgi|Poptr1_1|808090|fgenesh4_pm.C_LG_XV000301 | ||||
HSP 1 Score: 225.328 bits (573), Expect = 3.76966e-59 Query: 439 LQITHAAVSTVGGTAGISTEATNSMMQKFWDSAMVLTSNEDEEDARSEGSLKLASEGGTETGRALSYPLSAPPNTFAFKIQDKKGRMHRFTCETHSLADLIAAIIQRVGDDIDPHKLPQILYEDEDQDKVVLASDSDLATAVDHARSAGWKGLRLHLD 912 | ||||
fgenesh4_pm.C_LG_XII000372 | 9.9432e-52 | 63.03% | ||
jgi|Poptr1_1|806552|fgenesh4_pm.C_LG_XII000372 | ||||
HSP 1 Score: 200.675 bits (509), Expect = 9.9432e-52 Query: 439 LQITHAAVSTVGGTAGISTEATNSMMQKFWDSAMVLTSNEDEEDARSEGSLKL-------ASEGGTETGRALSYPLSAPPNTFAFKIQDKKGRMHRFTCETHSLADLIAAIIQRVGDDIDPHKLPQILYEDEDQDKVVLASDSDLATAVDHARSAGWKGLRLHLD 912 | ||||
gw1.VII.1651.1 | 5.85635e-36 | 51.27% | ||
jgi|Poptr1_1|217346|gw1.VII.1651.1 | ||||
HSP 1 Score: 148.288 bits (373), Expect = 5.85635e-36 Query: 439 LQITHAAVSTVGGTAGISTEATNSMMQKFWDSAMVLTSNEDEEDARSEGSLKLASEGGTETGRALSYPLSAPPNTFAFKIQDKKGRMHRFTCETHSLADLIAAIIQRVGDDIDPHKLPQILYEDEDQDKVVLASDSDLATAVDHARSAGWKGLRLHLD 912 | ||||
grail3.0026009102 | 4.66184e-17 | 50.53% | ||
jgi|Poptr1_1|650674|grail3.0026009102 | ||||
HSP 1 Score: 85.5001 bits (210), Expect = 4.66184e-17 Query: 628 LQITHAAVSTVGGTAGISTEATNSMMQKFWDSAMVLTSNEDEEDARSEGSLKLASEGGTETGRALSYPLSAPPNTFAFKIQDKKGRMHRFTCETH 912 | ||||
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Blast Hits to Contig V2 RO454
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_RO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
RO454_contig28012_v2 | 0 | 98.55% | ||
RO454_contig28012_v2 | ||||
HSP 1 Score: 639.81 bits (1390), Expect = 0 Query: 2 VLGFCHGLNL**G*RRCTK*RFLKVGFRGRNRDRTSTFLSFVSPP*YICF*NPR*EGQDA*VYLRDT*FGRSYSCDHSEGGG*H*PPQTTSDSV*R*RPG*SCTSIG**SCNCRGPCKVSWLEGLEIAFRLFRKTWSWESLXFGSXGLC*NTXRRMGFCIQCCRSWSSTCCWVRRXDIYEEVLNIVKHVNSINEFSNFSMSDLILE*RAKMELAVRACLVLDTCSRRTVYIIHEENHFLCTG*VAIALVTCVTLWWLEFLSAKVLQLR*PVV*L*Q 829 HSP 2 Score: 638.435 bits (1387), Expect = 0 Query: 3 SGILPWS*PLMRMKKMHEVKVP*SWLQREEQRQDEHFPILCQPPLIHLLLKSKIRRAGCIGLLARHIVWQIL*LRSFRGWGMTLTPTNYLRFCMKMKTRIKLY*HRIVILQLPWTMQGQLVGRA*DCI*TIQENVVVGELTVRELWTXLKHXQTHGLLHTVLSQLEQHLLLG*AX*HI*RGPKYCETC*FYK*VFKF*HV*FDPRVEGQNGIGCEGMSCA*YLFS*NRIHNT*GKSFFVYWLSGYCAGYMRDTLVA*VLVR*GIAASLTCSIIIT 827 HSP 3 Score: 609.568 bits (1324), Expect = 5.3792e-175 Query: 3 CYNYTTGQRSCNTLADKNSSHQSVTHVTSAIAT*PVHKK*FSSCIMYTVLREQVSSTRHALTANSILALYSRIKSDMLKFENSFIELTCFTIFRTSSYMSXXXXXXXXXXXXXXHCMQKPMRLXVFQXSPXLPNXKLSHDHVFLNSLNAISSPSNQLTLHGPRQLQDHYPMLVQLYPGLHLHTESEVVCGGQCHPPPSE*SQL*DLPNYVSRK*TYASCPSYLGF*KQMY*GGLTKDRKVLVLSLFLPLKPTLRNLHFVHLLHPH*RLRPWQNPR 827 HSP 4 Score: 307.609 bits (665), Expect = 2.61903e-164 Query: 1 IVIIILQVSEAAIP*RTRTQATKVSRM*PAQ*PLSQYTKNDFPHVLCIRFYENRYQAQDMPSQPIPFWPSTLGSNQTC*NLKTHL*N*HVSQYLGPLHICXYA*PSNKCCSSCDSTVCRSPCVCMCF 381 HSP 5 Score: 288.364 bits (623), Expect = 2.61903e-164 Query: 368 SXCVSAXSXAPEX*ALPRPRFPE*SKCNLKPFQPADLAWSTAVARXXXXXXXXXXXXXXXYRI*GSLWGSMSSPTL*MIAAIRSAKLCVSQVNLCILPFLSWILKANVLGGADKG*ESARPVSVPPSEANFKEPSLRAXXXXXLEVKTMAESQN 829 HSP 6 Score: 311.733 bits (674), Expect = 1.48777e-149 Query: 439 FWDSAMVLTSNEDEEDARSEGSLKLASEGGTETGRALSYPLSAPPNTFAFKIQDKKGRMHRFTCETHSLADLIAAIIQRVGDDIDPHKLPQILYEDEDQDKVVLASDSDLATAVDHARSAGWKGLRLHLD 828 HSP 7 Score: 237.961 bits (513), Expect = 1.48777e-149 Query: 1 TYMKRS*IL*NMLIL*MSFQILACLI*S*SRGPKWNWL*GHVLCLIPVLVEPYT*YMRKIIFCVLAKWLLRWLHA*HFGGLSSCPLRYCSFADL*YNYNN 300 HSP 8 Score: 243.001 bits (524), Expect = 1.28243e-135 Query: 2 LL*LYYRSAKLQYLSGQELKPPKCHACNQRNSHLASTQKMIFLMYYVYGSTRTGIKHKTCPHSQFHFGPLL*DQIRHAKI*KLIYRINMFHNI*DLFIYV 301 HSP 9 Score: 225.59 bits (486), Expect = 1.28243e-135 Query: 436 IV*MQSQALPTS*PCMVHGSCKITIRC*YNFILVFIFIQNLR*FVGVNVIPHPLNDRSYKICQTMCLASKPMHPALLILDFKSKCIRGG*QRIGK 720 HSP 10 Score: 56.0524 bits (116), Expect = 1.28243e-135 Query: 763 GTFTSCIFFILIRG*DHGRIPE 828 | ||||
RO454_contig26099_v2 | 6.51307e-37 | 65.85% | ||
RO454_contig26099_v2 | ||||
HSP 1 Score: 68.424 bits (143), Expect = 6.51307e-37 Query: 439 PQILYEDEDQDKVVLASDSDLATAVDHARSAGWKGLRLHLD 561 HSP 2 Score: 67.0494 bits (140), Expect = 6.51307e-37 Query: 577 GTETGRALSYPLSAPPNTFAFKIQDKKGRMHRFTCETHSLADLIAAIIQRVGDDI 741 HSP 3 Score: 53.3031 bits (110), Expect = 6.51307e-37 Query: 784 LQITHAAVSTVGGTAGISTEATNSMMQKFWDSAMVLTSNEDEE 912 HSP 4 Score: 44.5971 bits (91), Expect = 1.95049e-17 Query: 438 SLNAISSPSNQLTLHGPRQLQDHYPMLVQLYPGLHLHTESE 560 HSP 5 Score: 43.2225 bits (88), Expect = 1.95049e-17 Query: 815 AESQNFCIILFVASVLMPAVPPTVDTAA*VIC 910 HSP 6 Score: 34.5166 bits (69), Expect = 1.95049e-17 Query: 584 SPTL*MIAAIRSAKLCVSQVNLCILPFLSWILKANVLGGADKG*ESARPVSVPPSEAN 757 | ||||
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Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_TAIR7_pep_20070425)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
AT5G50530.1 | 2.02005e-54 | 66.67% | ||
CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein | chr5:20589102-20592148 REVERSE | ||||
HSP 1 Score: 209.534 bits (532), Expect = 2.02005e-54 Query: 439 LQITHAAVSTVGGTAGISTEATNSMMQKFWDSAMVLTSNEDEEDARSEG-SLKLASEGGTETGRALSYPLSAPPNTFAFKIQDKKGRMHRFTCETHSLADLIAAIIQRVGDDIDPHKLPQILYEDEDQDKVVLASDSDLATAVDHARSAGWKGLRLHLD 912 | ||||
AT5G50640.1 | 2.02005e-54 | 66.67% | ||
CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein | chr5:20622444-20625490 REVERSE | ||||
HSP 1 Score: 209.534 bits (532), Expect = 2.02005e-54 Query: 439 LQITHAAVSTVGGTAGISTEATNSMMQKFWDSAMVLTSNEDEEDARSEG-SLKLASEGGTETGRALSYPLSAPPNTFAFKIQDKKGRMHRFTCETHSLADLIAAIIQRVGDDIDPHKLPQILYEDEDQDKVVLASDSDLATAVDHARSAGWKGLRLHLD 912 | ||||
AT5G63490.1 | 3.44568e-54 | 66.46% | ||
CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein | chr5:25435942-25439196 REVERSE | ||||
HSP 1 Score: 208.764 bits (530), Expect = 3.44568e-54 Query: 439 LQITHAAVSTVGGTAGISTEATNSMMQKFWDSAMVLTSNEDEEDARSEGSLKLASEGGTETGRALSYPLSAPPNTFAFKIQDKKGRMHRFTCETHSLADLIAAIIQRVGDDIDPHKLPQILYEDEDQDKVVLASDSDLATAVDHARSAGWKGLRLHLD 912 | ||||
AT3G52950.1 | 9.75553e-33 | 47.17% | ||
CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein | chr3:19645844-19647514 FORWARD | ||||
HSP 1 Score: 137.502 bits (345), Expect = 9.75553e-33 Query: 439 LQITHAAVSTVGGTAGISTEATNSMMQKFWDSAMVLTSNEDEEDARSEGSLKLASEGGTETGRALSYPLSAPPNTFAFKIQDKKGRMHRFTCETHSLADLIAAIIQRVG-DDIDPHKLPQILYEDEDQDKVVLASDSDLATAVDHARSAGWKGLRLHLD 912 | ||||
AT2G36500.1 | 1.04471e-26 | 43.40% | ||
CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein | chr2:15325552-15327162 FORWARD | ||||
HSP 1 Score: 117.472 bits (293), Expect = 1.04471e-26 Query: 439 LQITHAAVSTV-GGTAGISTEATNSMMQKFWDSAMVLTSNEDEEDARSEGSLKLASEGGTETGRALSYPLSAPPNTFAFKIQDKKGRMHRFTCETHSLADLIAAIIQRVGDDIDPHKLPQILYEDEDQDKVVLASDSDLATAVDHARSAGWKGLRLHLD 912 | ||||
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Blast Hits to Contigs V2 WO454
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_WO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
WO454_contig10363_v2 | 2.6846e-58 | 100.00% | ||
WO454_contig10363_v2 | ||||
HSP 1 Score: 221.466 bits (477), Expect = 2.6846e-58 Query: 650 TTDHSCCCIHSWGYCWHKY*SNKQYDAKVLGFCHGLNL**G*RRCTK*RFLKVGFRGRNRDRTSTFLSFVSPP*YICF*NPR*EGQDA 913 HSP 2 Score: 216.425 bits (466), Expect = 8.83404e-57 Query: 651 WMYYRSLMLLYPQLGVLLA*VLKQQTV*CKSSGILPWS*PLMRMKKMHEVKVP*SWLQREEQRQDEHFPILCQPPLIHLLLKSKIRRAGC 920 HSP 3 Score: 207.261 bits (446), Expect = 5.06815e-54 Query: 649 LQITHAAVSTVGGTAGISTEATNSMMQKFWDSAMVLTSNEDEEDARSEGSLKLASEGGTETGRALSYPLSAPPNTFAFKIQDKKGRMH 912 HSP 4 Score: 166.481 bits (357), Expect = 2.62002e-53 Query: 763 GTFTSCIFFILIRG*DHGRIPELLHHTVCCFSTYASSTPNCGYSSMSDL*YIHYSNNFSISIYNRN 960 HSP 5 Score: 58.8016 bits (122), Expect = 2.62002e-53 Query: 649 MHPALLILDFKSKCIRGG*QRIGK 720 HSP 6 Score: 188.016 bits (404), Expect = 3.14847e-48 Query: 650 CILPFLSWILKANVLGGADKG*ESARPVSVPPSEANFKEPSLRAXXXXXLEVKTMAESQNFCIILFVASVLMPAVPPTVDTAA*VIC 910 HSP 7 Score: 177.478 bits (381), Expect = 4.68375e-45 Query: 651 ASCPSYLGF*KQMY*GGLTKDRKVLVLSLFLPLKPTLRNLHFVHLLHPH*RLRPWQNPRTFASXXXXXXXXXXXXXXXWIQQHE*SVVHP 920 | ||||
WO454_contig9953_v2 | 3.28221e-19 | 44.90% | ||
WO454_contig9953_v2 | ||||
HSP 1 Score: 58.3434 bits (121), Expect = 3.28221e-19 Query: 595 GTETGRALSYPLSAPPNTFAFKIQDKKGRMHRFTCETHSLADLIAAIIQ 741 HSP 2 Score: 52.3867 bits (108), Expect = 3.28221e-19 Query: 790 LQITHAAVSTVGGTAGISTEATNSMMQKFWDSAMVLTSNED 912 | ||||
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