Oall_contig40209_v2
| Name | Oall_contig40209_v2 |
|---|---|
| Accession | ID7192376 |
| Sequence | GTCCTGCTGTTATTATCAAAACCGGCTCTCCCTCCTCTCTATCTGTTGTG |
| Length | 1362 |
| Type | contig |
| Organism | Oak |
[-] Collapse All
References
| Dababase | Accession |
|---|---|
| GFF_source | SeqManPro |
ESTs in this contig
| Type | Feature | Position | ||
|---|---|---|---|---|
| EST | ROB_041225_1213_1480 | 0-259 | ||
| EST | WOA_069512_0575_2415 | 169-371 | ||
| EST | WOA_159999_0577_2417 | 169-371 | ||
| EST | WOA_036571_0599_2135 | 169-371 | ||
| EST | WOA_038644_0747_3514 | 169-371 | ||
| point_mutation | Oall_contig40209_v2-snp212 | 211 | 213 | 0 |
| EST | WOA_078967_1738_1912 | 223-507 | ||
| EST | WOA_065638_1197_1643 | 223-507 | ||
| EST | WOA_121565_1370_2664 | 223-508 | ||
| EST | WOA_144686_1357_2817 | 230-511 | ||
| microsatellite | Oall_contig40209_v2-ssr270 | 269 | 284 | 0 |
| point_mutation | Oall_contig40209_v2-snp331 | 330 | 332 | 0 |
| EST | WOA_117185_0823_1926 | 352-651 | ||
| point_mutation | Oall_contig40209_v2-snp356 | 355 | 357 | 0 |
| microsatellite | Oall_contig40209_v2-ssr410 | 409 | 421 | 0 |
| microsatellite | Oall_contig40209_v2-ssr475 | 474 | 494 | 0 |
| EST | WOB_145684_1225_1039 | 482-680 | ||
| EST | ROA_142219_0796_3504 | 540-809 | ||
| EST | ROB_049958_1577_1300 | 571-836 | ||
| microsatellite | Oall_contig40209_v2-ssr594 | 593 | 605 | 0 |
| EST | WOA_130275_1187_1969 | 759-989 | ||
| EST | ROB_061118_3374_1616 | 779-1,005 | ||
| EST | ROA_070592_0804_0466 | 797-1,021 | ||
| EST | ROA_060187_2896_2356 | 840-1,063 | ||
| EST | ROA_071700_2732_0942 | 857-1,085 | ||
| EST | ROA_101108_2559_2949 | 903-1,142 | ||
| EST | ROA_099571_0265_1180 | 918-1,138 | ||
| EST | ROB_028492_3800_2964 | 960-1,145 | ||
| EST | ROB_011583_3352_1230 | 960-1,145 | ||
| EST | ROB_010702_3355_1972 | 1,037-1,257 | ||
| EST | ROB_173975_3353_1970 | 1,039-1,258 | ||
| EST | ROB_113135_3852_0530 | 1,097-1,348 | ||
| EST | ROA_034857_2902_3602 | 1,107-1,362 | ||
| point_mutation | Oall_contig40209_v2-snp1120 | 1119 | 1121 | 0 |
InterProScan Analysis
Analysis Date: 11-20-2009
(Interpro: Oall_contigs_v2)
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Blast Hits to Contigs V2 AC454
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_AC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
AC454_contig8920_v2 | 2.06166e-112 | 93.25% | ||
AC454_contig8920_v2 | ||||
HSP 1 Score: 347.473 bits (752), Expect = 2.06166e-112 Query: 644 EWP*RASKCAAPGIGNHH*RTD*NCLFXYLNQISSKFR*FRPTGHPHCSFRSRIKVYQSIIYDG*GRTRSKN*PHQGGHRFTRGSK*LK*A*Y*HNHSQRHWGRYN*CR*PGRPVIR*CLSKYSKYGNKA*ATIHSA*ATNHSNFK*G*KEGT*KT*H*HTE* 1132 HSP 2 Score: 76.2135 bits (160), Expect = 2.06166e-112 Query: 515 FGVGFAVCDGGCSDCSVHRPPRHFQDL 595 HSP 3 Score: 241.169 bits (520), Expect = 6.80088e-111 Query: 829 HSVC*CQVFYVPSF*PYLKFEWFVAHAEWIVAHALFPYFEYFERHYLMTGRPGHLHQLYLPQCLCEWLCQYHAHLSHLLPRVNL*PP**G*FFDLVLPHPS 1131 HSP 4 Score: 127.991 bits (273), Expect = 6.80088e-111 Query: 613 QCGCPVGLNHLNLEEIWLRYXNKQF*SVL*WWLPIPGAAHLDARYGHSK*QL*HLQQI 786 HSP 5 Score: 68.8822 bits (144), Expect = 6.80088e-111 Query: 500 KVPRRSVYRTIGATTVTNSKTNTKFLTTI 586 HSP 6 Score: 303.485 bits (656), Expect = 1.28517e-97 Query: 540 NCIFPNVFVSGCVSIMLI*VICFLE*ICDLPDEVSSLILFFLIRHR*YSGRP*FLT*NCNAGVL*V*II*IWKRFG*GIXINNSNRFFNGGCRFLGQHI*TLVMAIQSNSCNIFNKFVSRRRRGLESAEAVGVQNNRSNHR 962 HSP 7 Score: 45.5136 bits (93), Expect = 1.28517e-97 Query: 1076 SFCMLVSGFLRSFFLTLLE 1132 HSP 8 Score: 44.5971 bits (91), Expect = 1.28517e-97 Query: 514 TEQSEQPPSQTAKPTPN 564 HSP 9 Score: 308.067 bits (666), Expect = 9.57553e-90 Query: 549 APIVLYTDRLGTFKTSSSSRDEFVEDVTTVTLNGHNERLNVLPQESATTIKEPIRIVYSDTSTKSLPNSDDLDLQDTRIAVSGQESRSTRVLSMTDEEEQDQRTNLIREVTDSLEEANDSNEHDTDTTTHKDIGEDTI 962 HSP 10 Score: 40.0151 bits (81), Expect = 9.57553e-90 Query: 1072 KLQVRLKRRNVENLTLAYRMTK 1137 HSP 11 Score: 277.825 bits (600), Expect = 1.44058e-76 Query: 643 *MAITSV*MCCPRNRQPPLKNRLELFIXIPQPNLFQIQMI*TYRTPALQFQVKNQGLPEYYL*RMRKNKIKELTSSGRSQIHSRKQMTQMSMILTQPLTKTLGKIQLMQMTRPTSHQIMPLKILKIW 1023 HSP 12 Score: 26.2688 bits (51), Expect = 1.44058e-76 Query: 1098 ERRKPDTSIQND 1133 HSP 13 Score: 144.945 bits (310), Expect = 6.12903e-35 Query: 641 LMRLVLXXXXXXSVIDNTLVDLDS*PETAMRVSCRSKSSEFGRDLVEVSE*TILIGSLMVVADSWGSTFRRSLWPFK 871 | ||||
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Blast Hits to Contigs V2 CC454
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_CC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
CC454_contig40747_v2 | 0 | 92.13% | ||
CC454_contig40747_v2 | ||||
HSP 1 Score: 402.916 bits (873), Expect = 0 Query: 829 FLWPMFAPLPSICHRHSLAVPNLFSHPQVLAELPSXDPEAPL*SEDCFLWLGGIYKPLP**FDL*VAAPEHLA*LFGHSVC*CQVFYVPSF*PYLKFEWFVAHAEWIVAHALFPYFEYFERHYLMTGRPGHLHQLYLPQCLCEWLCQYHAHLSHLLPRVNL*PP**G*FFDLVLPHPS 1362 HSP 2 Score: 134.864 bits (288), Expect = 0 Query: 613 QCGCPVGLNHLNLEEIWLRYXNKQF*SVL*WWLPIPGAAHLDARYGHSK*QL*HLQQI 786 HSP 3 Score: 88.5852 bits (187), Expect = 0 Query: 274 NHFINFILWILS*QNXRPLLYPFIH*T*NKTKTDRFAVEGRRR 402 HSP 4 Score: 68.8822 bits (144), Expect = 0 Query: 500 KVPRRSVYRTIGATTVTNSKTNTKFLTTI 586 HSP 5 Score: 47.3464 bits (97), Expect = 0 Query: 57 MLIFYLRQHLANANHSTNYRENKK*TKY 140 HSP 6 Score: 36.3494 bits (73), Expect = 0 Query: 206 SVLLAHIRQFCDS*SLEKRR 265 HSP 7 Score: 23.0613 bits (44), Expect = 0 Query: 404 YKEEERKKN* 433 HSP 8 Score: 22.6031 bits (43), Expect = 0 Query: 3 RGGRAGFDNNSR 38 HSP 9 Score: 492.267 bits (1068), Expect = 0 Query: 644 EWP*RASKCAAPGIGNHH*RTD*NCLFXYLNQISSKFR*FRPTGHPHCSFRSRIKVYQSIIYDG*GRTRSKN*PHQGGHRFTRGSK*LK*A*Y*HNHSQRHWGRYN*CR*PGRPVIR*CLSKYSKYGNKA*ATIHSA*ATNHSNFK*G*KEGT*KT*H*HTE*PNSYARCSGAATQRSNHQGKGLYIPPSHKKQSSLYKXXXXXXXXXXXXTWGCEKRFGTAKECL*QIEGNGANIGQR 1360 HSP 10 Score: 80.7956 bits (170), Expect = 0 Query: 272 LLLLPSTANLSVLVLFYVQXIKG*SNGLXFCQESIQRIKLIK 397 HSP 11 Score: 76.2135 bits (160), Expect = 0 Query: 515 FGVGFAVCDGGCSDCSVHRPPRHFQDL 595 HSP 12 Score: 39.5569 bits (80), Expect = 0 Query: 56 SILFTSCFLCS*YCD*H*QGVVLGK 130 HSP 13 Score: 34.0583 bits (68), Expect = 0 Query: 219 KL*ESQNCLM*ASNT 263 HSP 14 Score: 23.5196 bits (45), Expect = 0 Query: 2 SCCYYQNRLSLLSI 43 HSP 15 Score: 23.0613 bits (44), Expect = 0 Query: 429 LYNNNIRF 452 HSP 16 Score: 308.067 bits (666), Expect = 4.05764e-176 Query: 540 NCIFPNVFVSGCVSIMLI*VICFLE*ICDLPDEVSSLILFFLIRHR*YSGRP*FLT*NCNAGVL*V*II*IWKRFG*GIXINNSNRFFNGGCRFLGQHI*TLVMAIQSNSCNIFNKFVSRRRRGLESAEAVGVQNNRSNHR 962 HSP 17 Score: 196.722 bits (423), Expect = 4.05764e-176 Query: 1076 PLANVCSIAFNLS*AFLGSSESFLTSPSTR*TSFXXPRSSLVK*GLFLVAGRDI*TFALMI*SLSCRTRASGIAVWSFCMLVSGFLRSFFLTLLE 1360 HSP 18 Score: 85.8359 bits (181), Expect = 4.05764e-176 Query: 284 RKKN*KPLY*LYSLDTFLTKFKTVALPFYXLNIE*N*NRQICCRR 418 HSP 19 Score: 44.5971 bits (91), Expect = 4.05764e-176 Query: 514 TEQSEQPPSQTAKPTPN 564 HSP 20 Score: 44.5971 bits (91), Expect = 4.05764e-176 Query: 56 FFT*DNTLLMLITVLTTEKTRSEQNT 133 HSP 21 Score: 34.5166 bits (69), Expect = 4.05764e-176 Query: 226 RRRKKVCCSLTSDNFVIL 279 HSP 22 Score: 312.649 bits (676), Expect = 2.09319e-156 Query: 549 APIVLYTDRLGTFKTSSSSRDEFVEDVTTVTLNGHNERLNVLPQESATTIKEPIRIVYSDTSTKSLPNSDDLDLQDTRIAVSGQESRSTRVLSMTDEEEQDQRTNLIREVTDSLEEANDSNEHDTDTTTHKDIGEDTI 962 HSP 23 Score: 214.134 bits (461), Expect = 2.09319e-156 Query: 1072 KLQVRLKRRNVENLTLAYRMTKQLCQMLGCGNSKIKSSGQRFIYPSQPQETILTLQGSFGVX*RKFSEYLGM*EKIRNCQGMPMTN*RQWSKHWPKE 1362 HSP 24 Score: 50.0956 bits (103), Expect = 2.09319e-156 Query: 315 YSMFNX*KGKATVLNFVKKVSKE* 386 HSP 25 Score: 30.3927 bits (60), Expect = 2.09319e-156 Query: 226 KNHKIV*CERATH 264 HSP 26 Score: 22.1449 bits (42), Expect = 2.09319e-156 Query: 430 YTITTLDF 453 HSP 27 Score: 279.2 bits (603), Expect = 5.6015e-134 Query: 643 *MAITSV*MCCPRNRQPPLKNRLELFIXIPQPNLFQIQMI*TYRTPALQFQVKNQGLPEYYL*RMRKNKIKELTSSGRSQIHSRKQMTQMSMILTQPLTKTLGKIQLMQMTRPTSHQIMPLKILKIW 1023 HSP 28 Score: 194.89 bits (419), Expect = 5.6015e-134 Query: 1098 ERRKPDTSIQNDQTAMPDARVRQLKDQIIRAKVYISLPATRNNPHFTRELRGXXKEVQRVLGDVRKDSELPRNAYDKLKAMEQTLAKG 1361 HSP 29 Score: 44.1389 bits (90), Expect = 5.6015e-134 Query: 316 ILCSMXKRVKQRS*ILSRKYP 378 HSP 30 Score: 29.9345 bits (59), Expect = 5.6015e-134 Query: 227 RITKLSDVSEQHTFF 271 HSP 31 Score: 210.01 bits (452), Expect = 2.54694e-111 Query: 1107 SFGQCLLHCLQFVIGIPWQFRIFSHIPKYSLNFLXXTPKLPCKVRIVSCGWEGYINLCPDDLIFELPHPSIWHSCLVILYASVRF 1361 HSP 32 Score: 148.152 bits (317), Expect = 2.54694e-111 Query: 641 LMRLVLXXXXXXSVIDNTLVDLDS*PETAMRVSCRSKSSEFGRDLVEVSE*TILIGSLMVVADSWGSTFRRSLWPFK 871 HSP 33 Score: 64.3001 bits (134), Expect = 2.54694e-111 Query: 291 FFGYFLDKIXDRCFTLLXIEHRIKLKQTDLL 383 HSP 34 Score: 41.3897 bits (84), Expect = 2.54694e-111 Query: 55 LPKTTPC*C*SQY*LQRKQEVNKIL 129 HSP 35 Score: 28.1016 bits (55), Expect = 2.54694e-111 Query: 228 CVARSHQTIL*F 263 HSP 36 Score: 21.6867 bits (41), Expect = 2.54694e-111 Query: 197 SLEKRRGRE 223 | ||||
CC454_contig27717_v2 | 8.64478e-11 | 32.53% | ||
CC454_contig27717_v2 | ||||
HSP 1 Score: 65.6747 bits (137), Expect = 8.64478e-11 Query: 1110 PDTSIQNDQTAMPDARVRQLKDQIIRAKVYISLPATRNNPHFTRELRGXXKEVQRVLGDVRKDSELPRNAYDKLKAMEQTLAK 1358 | ||||
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Blast Hits to Contigs V2 CCall
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_CCall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
CCall_contig40381_v2 | 0 | 92.13% | ||
CCall_contig40381_v2 | ||||
HSP 1 Score: 402.916 bits (873), Expect = 0 Query: 829 FLWPMFAPLPSICHRHSLAVPNLFSHPQVLAELPSXDPEAPL*SEDCFLWLGGIYKPLP**FDL*VAAPEHLA*LFGHSVC*CQVFYVPSF*PYLKFEWFVAHAEWIVAHALFPYFEYFERHYLMTGRPGHLHQLYLPQCLCEWLCQYHAHLSHLLPRVNL*PP**G*FFDLVLPHPS 1362 HSP 2 Score: 134.864 bits (288), Expect = 0 Query: 613 QCGCPVGLNHLNLEEIWLRYXNKQF*SVL*WWLPIPGAAHLDARYGHSK*QL*HLQQI 786 HSP 3 Score: 88.5852 bits (187), Expect = 0 Query: 274 NHFINFILWILS*QNXRPLLYPFIH*T*NKTKTDRFAVEGRRR 402 HSP 4 Score: 68.8822 bits (144), Expect = 0 Query: 500 KVPRRSVYRTIGATTVTNSKTNTKFLTTI 586 HSP 5 Score: 47.3464 bits (97), Expect = 0 Query: 57 MLIFYLRQHLANANHSTNYRENKK*TKY 140 HSP 6 Score: 36.3494 bits (73), Expect = 0 Query: 206 SVLLAHIRQFCDS*SLEKRR 265 HSP 7 Score: 23.0613 bits (44), Expect = 0 Query: 404 YKEEERKKN* 433 HSP 8 Score: 22.6031 bits (43), Expect = 0 Query: 3 RGGRAGFDNNSR 38 HSP 9 Score: 492.267 bits (1068), Expect = 0 Query: 644 EWP*RASKCAAPGIGNHH*RTD*NCLFXYLNQISSKFR*FRPTGHPHCSFRSRIKVYQSIIYDG*GRTRSKN*PHQGGHRFTRGSK*LK*A*Y*HNHSQRHWGRYN*CR*PGRPVIR*CLSKYSKYGNKA*ATIHSA*ATNHSNFK*G*KEGT*KT*H*HTE*PNSYARCSGAATQRSNHQGKGLYIPPSHKKQSSLYKXXXXXXXXXXXXTWGCEKRFGTAKECL*QIEGNGANIGQR 1360 HSP 10 Score: 80.7956 bits (170), Expect = 0 Query: 272 LLLLPSTANLSVLVLFYVQXIKG*SNGLXFCQESIQRIKLIK 397 HSP 11 Score: 76.2135 bits (160), Expect = 0 Query: 515 FGVGFAVCDGGCSDCSVHRPPRHFQDL 595 HSP 12 Score: 39.5569 bits (80), Expect = 0 Query: 56 SILFTSCFLCS*YCD*H*QGVVLGK 130 HSP 13 Score: 34.0583 bits (68), Expect = 0 Query: 219 KL*ESQNCLM*ASNT 263 HSP 14 Score: 23.9778 bits (46), Expect = 0 Query: 430 YTITTLDFVK 459 HSP 15 Score: 23.5196 bits (45), Expect = 0 Query: 2 SCCYYQNRLSLLSI 43 HSP 16 Score: 308.067 bits (666), Expect = 2.09262e-168 Query: 540 NCIFPNVFVSGCVSIMLI*VICFLE*ICDLPDEVSSLILFFLIRHR*YSGRP*FLT*NCNAGVL*V*II*IWKRFG*GIXINNSNRFFNGGCRFLGQHI*TLVMAIQSNSCNIFNKFVSRRRRGLESAEAVGVQNNRSNHR 962 HSP 17 Score: 196.722 bits (423), Expect = 2.09262e-168 Query: 1076 PLANVCSIAFNLS*AFLGSSESFLTSPSTR*TSFXXPRSSLVK*GLFLVAGRDI*TFALMI*SLSCRTRASGIAVWSFCMLVSGFLRSFFLTLLE 1360 HSP 18 Score: 85.8359 bits (181), Expect = 2.09262e-168 Query: 284 RKKN*KPLY*LYSLDTFLTKFKTVALPFYXLNIE*N*NRQICCRR 418 HSP 19 Score: 44.5971 bits (91), Expect = 2.09262e-168 Query: 56 FFT*DNTLLMLITVLTTEKTRSEQNT 133 HSP 20 Score: 34.5166 bits (69), Expect = 2.09262e-168 Query: 226 RRRKKVCCSLTSDNFVIL 279 HSP 21 Score: 312.649 bits (676), Expect = 1.16016e-156 Query: 549 APIVLYTDRLGTFKTSSSSRDEFVEDVTTVTLNGHNERLNVLPQESATTIKEPIRIVYSDTSTKSLPNSDDLDLQDTRIAVSGQESRSTRVLSMTDEEEQDQRTNLIREVTDSLEEANDSNEHDTDTTTHKDIGEDTI 962 HSP 22 Score: 214.134 bits (461), Expect = 1.16016e-156 Query: 1072 KLQVRLKRRNVENLTLAYRMTKQLCQMLGCGNSKIKSSGQRFIYPSQPQETILTLQGSFGVX*RKFSEYLGM*EKIRNCQGMPMTN*RQWSKHWPKE 1362 HSP 23 Score: 50.0956 bits (103), Expect = 1.16016e-156 Query: 315 YSMFNX*KGKATVLNFVKKVSKE* 386 HSP 24 Score: 30.3927 bits (60), Expect = 1.16016e-156 Query: 226 KNHKIV*CERATH 264 HSP 25 Score: 23.0613 bits (44), Expect = 1.16016e-156 Query: 429 LYNNNIRF 452 HSP 26 Score: 279.2 bits (603), Expect = 5.80391e-134 Query: 643 *MAITSV*MCCPRNRQPPLKNRLELFIXIPQPNLFQIQMI*TYRTPALQFQVKNQGLPEYYL*RMRKNKIKELTSSGRSQIHSRKQMTQMSMILTQPLTKTLGKIQLMQMTRPTSHQIMPLKILKIW 1023 HSP 27 Score: 194.89 bits (419), Expect = 5.80391e-134 Query: 1098 ERRKPDTSIQNDQTAMPDARVRQLKDQIIRAKVYISLPATRNNPHFTRELRGXXKEVQRVLGDVRKDSELPRNAYDKLKAMEQTLAKG 1361 HSP 28 Score: 44.1389 bits (90), Expect = 5.80391e-134 Query: 316 ILCSMXKRVKQRS*ILSRKYP 378 HSP 29 Score: 29.9345 bits (59), Expect = 5.80391e-134 Query: 227 RITKLSDVSEQHTFF 271 HSP 30 Score: 210.01 bits (452), Expect = 1.13654e-118 Query: 1107 SFGQCLLHCLQFVIGIPWQFRIFSHIPKYSLNFLXXTPKLPCKVRIVSCGWEGYINLCPDDLIFELPHPSIWHSCLVILYASVRF 1361 HSP 31 Score: 148.152 bits (317), Expect = 1.13654e-118 Query: 641 LMRLVLXXXXXXSVIDNTLVDLDS*PETAMRVSCRSKSSEFGRDLVEVSE*TILIGSLMVVADSWGSTFRRSLWPFK 871 HSP 32 Score: 64.3001 bits (134), Expect = 1.13654e-118 Query: 291 FFGYFLDKIXDRCFTLLXIEHRIKLKQTDLL 383 HSP 33 Score: 44.5971 bits (91), Expect = 1.13654e-118 Query: 514 TEQSEQPPSQTAKPTPN 564 HSP 34 Score: 41.3897 bits (84), Expect = 1.13654e-118 Query: 55 LPKTTPC*C*SQY*LQRKQEVNKIL 129 HSP 35 Score: 28.1016 bits (55), Expect = 1.13654e-118 Query: 228 CVARSHQTIL*F 263 HSP 36 Score: 21.6867 bits (41), Expect = 1.13654e-118 Query: 197 SLEKRRGRE 223 | ||||
CCall_contig39030_v2 | 8.98384e-11 | 32.53% | ||
CCall_contig39030_v2 | ||||
HSP 1 Score: 65.6747 bits (137), Expect = 8.98384e-11 Query: 1110 PDTSIQNDQTAMPDARVRQLKDQIIRAKVYISLPATRNNPHFTRELRGXXKEVQRVLGDVRKDSELPRNAYDKLKAMEQTLAK 1358 | ||||
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Blast Hits to MedicagoProt
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_MedicagoProt_20080227)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
IMGA|AC161399_60.5 Glyco | 2.0239e-49 | 43.73% | ||
yl transferase, family 8 chr02_pseudomolecule_IMGAG_V2 7567664-7571736 E EGN_Mt071002 20080227 | ||||
HSP 1 Score: 192.971 bits (489), Expect = 2.0239e-49 Query: 549 APIVLYTDRLGTFKTSSSSRDEFVEDVTTVTLN-GHNERLNVLPQESATTIKEPIRIVYSDTST---KSLPNSDDLDLQDTRIAVSGQESRSTRVLSMTDEEEQDQRTNLIREVTDSLEEANDSNE---HDTDTTTHKDIGEDTIXXXXXXXXXXXXXXXXTQNMEIKXXXXXXXXXXXXXXXXXXXXXXERRKPDTSIQNDQTAMP-DARVRQLKDQIIRAKVYISLPATRNNPHFTRELRGXXKEVQRVLGDVRKDSELPRNAYDKLKAMEQTLAKG 1361 | ||||
IMGA|AC202485_14.4 Glyco | 3.85248e-16 | 57.14% | ||
yl transferase, family 8 chr04_pseudomolecule_IMGAG_V2 32664879-32667930 E EGN_Mt071002 20080227 | ||||
HSP 1 Score: 82.4185 bits (202), Expect = 3.85248e-16 Query: 1152 ARVRQLKDQIIRAKVYISLPATRNNPHFTRELRGXXKEVQRVLGDVRKDSELPRNAYDKLKAMEQTLAKG 1361 | ||||
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Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_PopulusProt_JamboreeModels1_1)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
eugene3.00060014 | 2.34368e-31 | 37.76% | ||
jgi|Poptr1_1|560055|eugene3.00060014 | ||||
HSP 1 Score: 133.65 bits (335), Expect = 2.34368e-31 Query: 642 LNGHNERLNVLPQ-ESATTIKEPIRIVYSDTSTKSLPNSDDLDLQDTRIAVSGQESRSTRVLSMTDEEEQDQRTNLIREVTDSLEEANDSNEHDTDTTTHKDIGEDTIXXXXXXXXXXXXXXXXTQNMEIKXXXXXXXXXXXXXXXXXXXXXXERRKPDTSIQNDQTAMPDARVRQLKDQIIRAKVYISLPATRNNPHFTRELRGXXKEVQRVLGDVRKDSELPRNAYDKLKAMEQTLAKG 1361 | ||||
estExt_fgenesh4_pg.C_1370028 | 8.90599e-31 | 37.67% | ||
jgi|Poptr1_1|828111|estExt_fgenesh4_pg.C_1370028 | ||||
HSP 1 Score: 131.724 bits (330), Expect = 8.90599e-31 Query: 693 TIKEPIRIVYSDTSTKSLPNSDDLDLQDTRIAVSGQESRSTRVLSMTDEEEQDQRTNLIREVTDSLEEANDSNEHDTDTTTHKDIGEDTIXXXXXXXXXXXXXXXXTQNMEIKXXXXXXXXXXXXXXXXXXXXXXERRKPDTSIQNDQTAMPDARVRQLKDQIIRAKVYISLPATRNNPHFTRELRGXXKEVQRVLGDVRKDSELPRNAYDKLKAMEQTLAKG 1361 | ||||
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Blast Hits to Contig V2 RO454
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_RO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
RO454_contig25225_v2 | 7.30069e-167 | 100.00% | ||
RO454_contig25225_v2 | ||||
HSP 1 Score: 444.613 bits (964), Expect = 7.30069e-167 Query: 829 FLWPMFAPLPSICHRHSLAVPNLFSHPQVLAELPSXDPEAPL*SEDCFLWLGGIYKPLP**FDL*VAAPEHLA*LFGHSVC*CQVFYVPSF*PYLKFEWFVAHAEWIVAHALFPYFEYFERHYLMTGRPGHLHQLYLPQCLCEWLCQYHAHLSHLLPRVNL*PP**G*FFDLVLPHPS 1362 HSP 2 Score: 143.112 bits (306), Expect = 7.30069e-167 Query: 613 QCGCPVGLNHLNLEEIWLRYXNKQF*SVL*WWLPIPGAAHLDARYGHSK*QL*HLQQI 786 HSP 3 Score: 37.2658 bits (75), Expect = 7.30069e-167 Query: 542 KVPRRSVYRTIGATT 586 HSP 4 Score: 532.589 bits (1156), Expect = 5.57155e-161 Query: 644 EWP*RASKCAAPGIGNHH*RTD*NCLFXYLNQISSKFR*FRPTGHPHCSFRSRIKVYQSIIYDG*GRTRSKN*PHQGGHRFTRGSK*LK*A*Y*HNHSQRHWGRYN*CR*PGRPVIR*CLSKYSKYGNKA*ATIHSA*ATNHSNFK*G*KEGT*KT*H*HTE*PNSYARCSGAATQRSNHQGKGLYIPPSHKKQSSLYKXXXXXXXXXXXXTWGCEKRFGTAKECL*QIEGNGANIGQR 1360 HSP 5 Score: 52.8449 bits (109), Expect = 5.57155e-161 Query: 542 GGCSDCSVHRPPRHFQDL 595 HSP 6 Score: 317.231 bits (686), Expect = 5.63747e-150 Query: 549 APIVLYTDRLGTFKTSSSSRDEFVEDVTTVTLNGHNERLNVLPQESATTIKEPIRIVYSDTSTKSLPNSDDLDLQDTRIAVSGQESRSTRVLSMTDEEEQDQRTNLIREVTDSLEEANDSNEHDTDTTTHKDIGEDTI 962 HSP 7 Score: 231.546 bits (499), Expect = 5.63747e-150 Query: 1072 KLQVRLKRRNVENLTLAYRMTKQLCQMLGCGNSKIKSSGQRFIYPSQPQETILTLQGSFGVX*RKFSEYLGM*EKIRNCQGMPMTN*RQWSKHWPKE 1362 HSP 8 Score: 317.231 bits (686), Expect = 1.64761e-144 Query: 543 NCIFPNVFVSGCVSIMLI*VICFLE*ICDLPDEVSSLILFFLIRHR*YSGRP*FLT*NCNAGVL*V*II*IWKRFG*GIXINNSNRFFNGGCRFLGQHI*TLVMAIQSNSCNIFNKFVSRRRRGLESAEAVGVQNNRSNH 962 HSP 9 Score: 217.8 bits (469), Expect = 1.64761e-144 Query: 1107 SFGQCLLHCLQFVIGIPWQFRIFSHIPKYSLNFLXXTPKLPCKVRIVSCGWEGYINLCPDDLIFELPHPSIWHSCLVILYASVRF 1361 HSP 10 Score: 292.946 bits (633), Expect = 9.54011e-134 Query: 643 *MAITSV*MCCPRNRQPPLKNRLELFIXIPQPNLFQIQMI*TYRTPALQFQVKNQGLPEYYL*RMRKNKIKELTSSGRSQIHSRKQMTQMSMILTQPLTKTLGKIQLMQMTRPTSHQIMPLKILKIW 1023 HSP 11 Score: 201.763 bits (434), Expect = 9.54011e-134 Query: 1098 ERRKPDTSIQNDQTAMPDARVRQLKDQIIRAKVYISLPATRNNPHFTRELRGXXKEVQRVLGDVRKDSELPRNAYDKLKAMEQTLAKG 1361 HSP 12 Score: 204.054 bits (439), Expect = 8.88296e-92 Query: 1076 PLANVCSIAFNLS*AFLGSSESFLTSPSTR*TSFXXPRSSLVK*GLFLVAGRDI*TFALMI*SLSCRTRASGIAVWSFCMLVSGFLRSFFLTLLE 1360 HSP 13 Score: 155.025 bits (332), Expect = 8.88296e-92 Query: 641 LMRLVLXXXXXXSVIDNTLVDLDS*PETAMRVSCRSKSSEFGRDLVEVSE*TILIGSLMVVADSWGSTFRRSLWPFK 871 HSP 14 Score: 22.6031 bits (43), Expect = 8.88296e-92 Query: 541 TEQSEQPP 564 | ||||
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Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_TAIR7_pep_20070425)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
AT5G47780.1 | 6.89894e-33 | 36.76% | ||
GAUT4 (Galacturonosyltransferase 4); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups | chr5:19365217-19367743 FORWARD | ||||
HSP 1 Score: 138.658 bits (348), Expect = 6.89894e-33 Query: 549 APIVLYTDRLGTFKTSSSSRDEFVEDVTTVTLNGHNERLNVLPQESATTIKEP-IRIVYSDTSTKSLPNSDDLDLQDTRIAVSGQESRSTRVLSMTDEEEQDQRTNLIREVTDSLEEANDSNEHDTDTTTHKDIGEDTIXXXXXXXXXXXXXXXXTQNMEIKXXXXXXXXXXXXXXXXXXXXXXERRKPDTSIQNDQTAMPDARVRQLKDQIIRAKVYISLPATRNNPHFTRELRGXXKEVQRVLGDVRKDSELPRNAYDKLKAMEQTLAKG 1361 | ||||
AT2G30575.1 | 2.08687e-13 | 25.83% | ||
GAUT5/LGT5 (Galacturonosyltransferase 5); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups | chr2:13027641-13030983 REVERSE | ||||
HSP 1 Score: 73.9442 bits (180), Expect = 2.08687e-13 Query: 549 APIVLYTDRLGTFKTSSSSRDEFVEDVTTVTLNGHNE-RLNVLPQESATTIKEPIRIVYSDTSTKSLPNSDDLDLQDTRIAVSGQESRSTRVLSMTDEEEQDQRTNLIREVTDSLEEANDSNEHDTDTTTHKDIGEDTIXXXXXXXXXXXXXXXXTQNMEIKXXXXXXXXXXXXXXXXXXXXXXERRKPDTSIQNDQTAMPDARVRQLKDQIIRAKVYISLPATRNNPHFTRELRGXXKEVQRVLGDVRKDSELPRNAYDKLKAMEQTLAK 1358 | ||||
AT3G61130.1 | 2.55103e-11 | 41.03% | ||
GAUT1/LGT1 (Galacturonosyltransferase 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups | chr3:22633374-22636489 FORWARD | ||||
HSP 1 Score: 67.0106 bits (162), Expect = 2.55103e-11 Query: 1125 QNDQTAMPDARVRQLKDQIIRAKVYISLPATRNNPHFTRELRGXXKEVQRVLGDVRKDSELPRNAYDKLKAMEQTLAK 1358 | ||||
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Blast Hits to Contigs V2 WO454
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_WO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
WO454_contig18337_v2 | 9.3923e-53 | 94.32% | ||
WO454_contig18337_v2 | ||||
HSP 1 Score: 203.596 bits (438), Expect = 9.3923e-53 Query: 761 FRPTGHPHCSFRSRIKVYQSIIYDG*GRTRSKN*PHQGGHRFTRGSK*LK*A*Y*HNHSQRHWGRYN*CR*PGRPVIR*CLSKYSKYG 1024 HSP 2 Score: 191.224 bits (411), Expect = 4.97742e-49 Query: 760 I*TYRTPALQFQVKNQGLPEYYL*RMRKNKIKELTSSGRSQIHSRKQMTQMSMILTQPLTKTLGKIQLMQMTRPTSHQIMPLKILKIW 1023 HSP 3 Score: 157.316 bits (337), Expect = 2.22398e-41 Query: 829 PYFEYFERHYLMTGRPGHLHQLYLPQCLCEWLCQYHAHLSHLLPRVNL*PP**G*FFDLVLPHPS 1023 HSP 4 Score: 28.5598 bits (56), Expect = 2.22398e-41 Query: 760 QCGCPVGLN 786 HSP 5 Score: 156.858 bits (336), Expect = 1.10177e-38 Query: 762 LDLQDTRIAVSGQESRSTRVLSMTDEEEQDQRTNLIREVTDSLEEANDSNEHDTDTTTHKDIGEDTI 962 HSP 6 Score: 146.778 bits (314), Expect = 1.19594e-35 Query: 762 NCIFPNVFVSGCVSIMLI*VICFLE*ICDLPDEVSSLILFFLIRHR*YSGRP*FLT*NCNAGVL*V* 962 | ||||
WO454_contig21305_v2 | 1.06625e-37 | 93.94% | ||
WO454_contig21305_v2 | ||||
HSP 1 Score: 73.4643 bits (154), Expect = 1.06625e-37 Query: 265 QNXRPLLYPFIH*T*NKTKTDRFAVEGRRRRKK 363 HSP 2 Score: 59.2598 bits (123), Expect = 1.06625e-37 Query: 359 YKEEERKKN*KPLY*LYSLDTFLTK 433 HSP 3 Score: 54.2195 bits (112), Expect = 1.06625e-37 Query: 197 SVLLAHIRQFCDS*SLEKRRGRE 265 HSP 4 Score: 22.1449 bits (42), Expect = 1.06625e-37 Query: 432 FTKSNVVIV 458 HSP 5 Score: 67.0494 bits (140), Expect = 3.40884e-20 Query: 266 FFLLLLPSTANLSVLVLFYVQXIKG*SNGLXFCQESIQRIKLIK 397 HSP 6 Score: 37.724 bits (76), Expect = 3.40884e-20 Query: 227 RITKLSDVSEQHTFF 271 HSP 7 Score: 27.1852 bits (53), Expect = 3.40884e-20 Query: 429 LYNNNIRFC 455 HSP 8 Score: 61.0927 bits (127), Expect = 5.40175e-19 Query: 284 KFKTVALPFYXLNIE*N*NRQICCRR 361 HSP 9 Score: 42.7643 bits (87), Expect = 5.40175e-19 Query: 226 RRRRKKVCCSLTSDNFVIL 282 HSP 10 Score: 23.9778 bits (46), Expect = 5.40175e-19 Query: 360 FFGYFLDK 383 HSP 11 Score: 57.427 bits (119), Expect = 3.74584e-12 Query: 291 FLDKIXDRCFTLLXIEHRIKLKQTDLL 371 HSP 12 Score: 29.9345 bits (59), Expect = 3.74584e-12 Query: 228 CVARSHQTIL*F 263 HSP 13 Score: 41.3897 bits (84), Expect = 5.72504e-12 Query: 335 KG*SNGLXFCQESIQRIKLIKW 400 HSP 14 Score: 35.8912 bits (72), Expect = 5.72504e-12 Query: 216 SKL*ESQNCLM*ASNT 263 HSP 15 Score: 26.2688 bits (51), Expect = 5.72504e-12 Query: 430 YTITTLDFVK 459 | ||||
WO454_contig7657_v2 | 3.2374e-36 | 100.00% | ||
WO454_contig7657_v2 | ||||
HSP 1 Score: 68.8822 bits (144), Expect = 3.2374e-36 Query: 500 KVPRRSVYRTIGATTVTNSKTNTKFLTTI 586 HSP 2 Score: 62.0091 bits (129), Expect = 3.2374e-36 Query: 356 YKEEERKKN*KPLY*LYSLDTFLTKF 433 HSP 3 Score: 51.0121 bits (105), Expect = 3.2374e-36 Query: 615 GQHI*TLVMAIQSNSCNIFNK 677 HSP 4 Score: 22.1449 bits (42), Expect = 3.2374e-36 Query: 432 FTKSNVVIV 458 HSP 5 Score: 76.2135 bits (160), Expect = 2.84672e-33 Query: 515 FGVGFAVCDGGCSDCSVHRPPRHFQDL 595 HSP 6 Score: 52.8449 bits (109), Expect = 2.84672e-33 Query: 615 FVEDVTTVTLNGHNERLNVLP 677 HSP 7 Score: 37.724 bits (76), Expect = 2.84672e-33 Query: 359 FCQESIQRIKLIKW 400 HSP 8 Score: 27.1852 bits (53), Expect = 2.84672e-33 Query: 429 LYNNNIRFC 455 HSP 9 Score: 62.4673 bits (130), Expect = 1.64314e-28 Query: 540 KFVSRRRRGLESAEAVGVQNNRSNHR 617 HSP 10 Score: 50.5539 bits (104), Expect = 1.64314e-28 Query: 616 GAAHLDARYGHSK*QL*HLQQ 678 HSP 11 Score: 50.0956 bits (103), Expect = 1.64314e-28 Query: 358 ERKIENHFINFILWILS*QN 417 HSP 12 Score: 55.5941 bits (115), Expect = 9.23266e-18 Query: 549 APIVLYTDRLGTFKTSSSSRDEF 617 HSP 13 Score: 33.1419 bits (66), Expect = 9.23266e-18 Query: 644 EWP*RASKCAAP 679 HSP 14 Score: 26.2688 bits (51), Expect = 9.23266e-18 Query: 430 YTITTLDFVK 459 HSP 15 Score: 25.3524 bits (49), Expect = 9.23266e-18 Query: 354 LNFVKKVSKE* 386 HSP 16 Score: 44.5971 bits (91), Expect = 1.13532e-13 Query: 514 TEQSEQPPSQTAKPTPN 564 HSP 17 Score: 39.0986 bits (79), Expect = 1.13532e-13 Query: 641 WGSTFRRSLWPFK 679 HSP 18 Score: 25.8106 bits (50), Expect = 1.13532e-13 Query: 357 FFGYFLDKI 383 | ||||
WO454_contig16197_v2 | 3.77518e-13 | 74.07% | ||
WO454_contig16197_v2 | ||||
HSP 1 Score: 56.5106 bits (117), Expect = 3.77518e-13 Query: 1107 PDDLIFELPHPSIWHSCLVILYASVRF 1187 HSP 2 Score: 26.2688 bits (51), Expect = 3.77518e-13 Query: 1051 PSF*PYLKFEWFVAHA 1098 HSP 3 Score: 24.8942 bits (48), Expect = 3.77518e-13 Query: 1192 DCFLWLGGIYKP 1227 | ||||
WO454_contig4732_v2 | 6.71705e-13 | 77.27% | ||
WO454_contig4732_v2 | ||||
HSP 1 Score: 47.8046 bits (98), Expect = 6.71705e-13 Query: 1122 PDDLIFELPHPSIWHSCLVILY 1187 HSP 2 Score: 30.3927 bits (60), Expect = 6.71705e-13 Query: 1260 WQFRIFSHIPKYSLNFL 1310 HSP 3 Score: 29.4763 bits (58), Expect = 6.71705e-13 Query: 1206 KLPCKVRIVSCGWE 1247 | ||||
WO454_contig16264_v2 | 1.64132e-11 | 33.73% | ||
WO454_contig16264_v2 | ||||
HSP 1 Score: 66.5912 bits (139), Expect = 1.64132e-11 Query: 1110 PDTSIQNDQTAMPDARVRQLKDQIIRAKVYISLPATRNNPHFTRELRGXXKEVQRVLGDVRKDSELPRNAYDKLKAMEQTLAK 1358 | ||||
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