Oall_contig40205_v2
| Name | Oall_contig40205_v2 |
|---|---|
| Accession | ID7192300 |
| Sequence | ATCTCCACTCGATGCATGACACAGGATTGCTTTCTTCAGAAATGCAGCAG |
| Length | 1217 |
| Type | contig |
| Organism | Oak |
[-] Collapse All
References
| Dababase | Accession |
|---|---|
| GFF_source | SeqManPro |
ESTs in this contig
| Type | Feature | Position |
|---|---|---|
| EST | ROA_086167_0121_1891 | 0-238 |
| EST | WOA_092215_1930_2751 | 139-404 |
| EST | ROA_108228_2813_3257 | 275-536 |
| EST | ROB_039422_3446_1537 | 293-533 |
| EST | ROA_010601_2676_3258 | 358-551 |
| EST | ROA_011989_2352_3059 | 358-551 |
| EST | ROB_057126_3743_3467 | 384-629 |
| EST | ROA_084667_0568_3207 | 434-597 |
| EST | WOA_108020_0183_0956 | 472-704 |
| EST | WOB_131318_1743_2871 | 511-746 |
| EST | WOA_062769_0375_0807 | 516-756 |
| EST | WOA_058986_0629_2012 | 516-756 |
| EST | ROA_076079_0227_1468 | 526-760 |
| EST | ROB_136815_1266_2984 | 556-809 |
| EST | WOA_079046_1509_1180 | 615-872 |
| EST | ROA_144031_0514_0582 | 634-876 |
| EST | ROB_099095_3779_2796 | 696-960 |
| EST | WOB_059336_1614_3034 | 724-937 |
| EST | ROB_069553_1659_3127 | 778-1,004 |
| EST | ROB_090430_1295_2589 | 797-1,069 |
| EST | WOA_063054_0353_3497 | 865-1,080 |
| EST | WOB_137873_1715_1703 | 897-1,177 |
| EST | WOA_050914_0507_1212 | 898-1,182 |
| EST | WOA_043532_0462_0788 | 898-1,182 |
| EST | ROA_036220_0704_2423 | 978-1,209 |
| EST | ROA_075305_0510_2634 | 979-1,165 |
| EST | ROA_153737_2801_3057 | 1,108-1,217 |
InterProScan Analysis
Analysis Date: 11-20-2009
(Interpro: Oall_contigs_v2)
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Blast Hits to Contigs V2 AC454
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_AC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
AC454_contig14728_v2 | 5.17818e-127 | 89.89% | ||
AC454_contig14728_v2 | ||||
HSP 1 Score: 201.763 bits (434), Expect = 5.17818e-127 Query: 703 ALGMHLLPAYVPLTSPXFLLPNYAPTLPPTILXRISKVHFNGFHGIGNTXAWSPNKNSPSHYIHSNHPPSLXL*TRHCFKPSSSXHLRE 969 HSP 2 Score: 197.639 bits (425), Expect = 5.17818e-127 Query: 404 IYLASVSYLL*MAALSHPLDSYTPDNQPXHCCYLFPSLHCCYLFPSMEKLAIHHSHFVHYS*QLTAKVAAALSWXTAQDNW*KQ*DIWPTRTQNQ*KMKI 703 HSP 3 Score: 51.0121 bits (105), Expect = 5.17818e-127 Query: 986 YYTGCGKRKIFLPVRASLSS 1045 HSP 4 Score: 44.1389 bits (90), Expect = 5.17818e-127 Query: 307 VIITINLQES*TPINIGDAR 366 HSP 5 Score: 34.9748 bits (70), Expect = 5.17818e-127 Query: 361 FIPIPKAITHRNVI 402 HSP 6 Score: 187.1 bits (402), Expect = 7.71108e-118 Query: 402 RIFIFY*FCVLVGQISYCFYQLSCAVXQERAAATFAVSC*E**TKCEWCIASFSIEGNK*QQWSEGNK*QQWXG*LSGV*ESRGCESAAIHSRYETEAR*IL 707 HSP 7 Score: 149.985 bits (321), Expect = 7.71108e-118 Query: 702 IL*DAXTNWV*SSVEFTAXGKGGGWNECSGKGSSCWGTMHXCFRSRESH*NALC*F*XVWWGAEWEHN 905 HSP 8 Score: 57.427 bits (119), Expect = 7.71108e-118 Query: 983 RRGEGGSHWQKYLSFAAPCII 1045 HSP 9 Score: 45.9718 bits (94), Expect = 7.71108e-118 Query: 310 GIPNVDGSSALLKIDSNNYV 369 HSP 10 Score: 39.5569 bits (80), Expect = 7.71108e-118 Query: 926 EVRGT*AGSRCIPRASSCRRRGE 994 HSP 11 Score: 36.8076 bits (74), Expect = 7.71108e-118 Query: 367 VPMSYGFWDGNKGFSSFT 420 HSP 12 Score: 130.74 bits (279), Expect = 2.78975e-103 Query: 813 LFSCKKRPSECIYYLPMSPLPLQDSSSLIMLPLCPPPYXSELAKCILMAFTGSETLVHG 989 HSP 13 Score: 112.87 bits (240), Expect = 2.78975e-103 Query: 402 DGKTGNTPFTFRSLLLTTDCXGGCGSFLXDGTG*LVKAVGYLANKNAESVKDENP 566 HSP 14 Score: 63.8419 bits (133), Expect = 2.78975e-103 Query: 621 NLSCLCFISTVNGCTFAPSRLLYT**SA 704 HSP 15 Score: 47.8046 bits (98), Expect = 2.78975e-103 Query: 981 LLYRVRQKKDIFASESLPLLFS 1046 HSP 16 Score: 44.5971 bits (91), Expect = 2.78975e-103 Query: 702 CGCKLDTASNPVRLXISEN 758 HSP 17 Score: 42.3061 bits (86), Expect = 2.78975e-103 Query: 306 *LLLSIFRRAELPSTLGMPE 365 HSP 18 Score: 33.1419 bits (66), Expect = 2.78975e-103 Query: 362 ILYSHPKSHNSSERN 406 HSP 19 Score: 27.6434 bits (54), Expect = 2.78975e-103 Query: 563 LHCCYLFPSM 592 HSP 20 Score: 133.948 bits (286), Expect = 6.10083e-102 Query: 526 NERNVNGVLPVFPSREISSSNGVREISSSNGVADYQVYRSREGAKVQPFTVDMKQRQD 699 HSP 21 Score: 131.657 bits (281), Expect = 6.10083e-102 Query: 814 PCTSVSDPVKAIKMHFANSDQYGGGQSGSIIREEESWRGKGDIGR**MHSEGLFLQEKR 990 HSP 22 Score: 52.3867 bits (108), Expect = 6.10083e-102 Query: 403 GFSSFTDSAFLLAKYPTAFTSY 468 HSP 23 Score: 50.5539 bits (104), Expect = 6.10083e-102 Query: 982 EKRRGRLSLAKISFFCRTLYN 1044 HSP 24 Score: 40.9315 bits (83), Expect = 6.10083e-102 Query: 704 SLRCXDELGLKQCRVYSXR 760 HSP 25 Score: 40.4733 bits (82), Expect = 6.10083e-102 Query: 306 FWHPQC*WEFSSPED* 353 HSP 26 Score: 30.8509 bits (61), Expect = 6.10083e-102 Query: 369 SDELWLLGWE* 401 HSP 27 Score: 135.781 bits (290), Expect = 1.72342e-93 Query: 701 APHHTXQN*QSAF*WLSRDRKHXCMVPQQELPFPLHSFQPPPFPXAVNSTLLQTQFVXASQRI 889 HSP 28 Score: 133.031 bits (284), Expect = 1.72342e-93 Query: 526 ILPLFHIYCEWLHFRTLSTPIHLIISHXIAATYFPHSIAATYFPRWKNWQYTIHISFI 699 HSP 29 Score: 53.7613 bits (111), Expect = 1.72342e-93 Query: 308 SHPKSHNSSERNYYYQSSGELNSHQHWGCQ 397 HSP 30 Score: 44.1389 bits (90), Expect = 1.72342e-93 Query: 403 ITGKSSRIFGQQERRISKR*KS 468 HSP 31 Score: 35.433 bits (71), Expect = 1.72342e-93 Query: 947 KRKIFLPVRASLSSSPARRGPRNASTT 1027 HSP 32 Score: 32.2255 bits (64), Expect = 1.72342e-93 Query: 1009 IIQGAAKERYFC 1044 HSP 33 Score: 124.784 bits (266), Expect = 1.10584e-72 Query: 491 SRSHLXSQLLRVMNEM*MVYCQFFHRGK*VAAME*GK*VAAMXWLIIRCIGVERVRKCSHSQ*I*NRGKI 700 HSP 34 Score: 48.2628 bits (99), Expect = 1.10584e-72 Query: 812 DHAXVFPIP*KPLKCTLLILXSMV 883 HSP 35 Score: 46.8882 bits (96), Expect = 1.10584e-72 Query: 987 EEREALTGKNIFLLPHPV** 1046 HSP 36 Score: 40.4733 bits (82), Expect = 1.10584e-72 Query: 703 FSEMXRRTGFEAVSSLQPQ 759 HSP 37 Score: 39.5569 bits (80), Expect = 1.10584e-72 Query: 939 HRQVVDAFRGPLLAGEEEREALT 1007 HSP 38 Score: 34.9748 bits (70), Expect = 1.10584e-72 Query: 404 DFHLLLILRSCWPN 445 HSP 39 Score: 34.0583 bits (68), Expect = 1.10584e-72 Query: 308 LASPMLMGVQLS*RLIVII 364 HSP 40 Score: 29.4763 bits (58), Expect = 1.10584e-72 Query: 350 LIVIITFR*VMAFGMGIK 403 | ||||
AC454_contig24458_v2 | 4.66642e-37 | 98.39% | ||
AC454_contig24458_v2 | ||||
HSP 1 Score: 151.818 bits (325), Expect = 4.66642e-37 Query: 1029 NCPS*LARIIFLYFHHQIQQI*SYWEYYNHLKYFTKKTDFLRTVHCPYHFN*TIQKLLYRVR 1214 HSP 2 Score: 150.443 bits (322), Expect = 1.21001e-36 Query: 1028 TAPPNLHGLFFCISIIKYNKYKATGNITTT*NTLPKRRTF*EPSIAPIILIEQYKNYYTGCG 1213 HSP 3 Score: 144.945 bits (310), Expect = 5.47018e-35 Query: 1030 KLPLLTCTDYFSVFPSSNTTNIKLLGILQPPKILYQKDGLFENRPLPLSF*LNNTKTIIQGA 1215 HSP 4 Score: 144.487 bits (309), Expect = 7.51512e-35 Query: 1030 RTLYNSFCIVQLK**GQWTVLKKSVFLVKYFRWL*YSQ*LYICCI**WKYRKIIRAS*EGQF 1215 HSP 5 Score: 144.028 bits (308), Expect = 1.03245e-34 Query: 1029 PHPV**FLYCSIKMIGAMDGSQKVRLFGKVF*VVVIFPVALYLLYLMMEIQKNNPCKLGGAV 1214 HSP 6 Score: 143.57 bits (307), Expect = 1.41842e-34 Query: 1028 AAPCIIVFVLFN*NDRGNGRFSKSPSFW*SILGGCNIPSSFIFVVFDDGNTEK*SVQVRRGS 1213 | ||||
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Blast Hits to Contigs V2 CC454
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_CC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
CC454_contig40217_v2 | 0 | 85.61% | ||
CC454_contig40217_v2 | ||||
HSP 1 Score: 275.992 bits (596), Expect = 0 Query: 2 SHPKSHNSSERNYYYQSSGELNSHQHWGCQKFLN*TSCCLTLDYSPPFPHSHGY*NLTSXXKXFY*VSGQXVLXHHXCMVYLHLTNFVNELLNGH*FALSFGTEVEVQPLS*EVLNCCISEESNPVSCIEWR 397 HSP 2 Score: 199.93 bits (430), Expect = 0 Query: 703 ALGMHLLPAYVPLTSPXFLLPNYAPTLPPTILXRISKVHFNGFHGIGNTXAWSPNKNSPSHYIHSNHPPSLXL*TRHCFKPSSSXHLRE 969 HSP 3 Score: 199.472 bits (429), Expect = 0 Query: 404 IYLASVSYLL*MAALSHPLDSYTPDNQPXHCCYLFPSLHCCYLFPSMEKLAIHHSHFVHYS*QLTAKVAAALSWXTAQDNW*KQ*DIWPTRTQNQ*KMKI 703 HSP 4 Score: 190.766 bits (410), Expect = 0 Query: 972 NCPS*LARIIFLYFHHQIQQI*SYWEYYNHLKYFTKKTDFLRTVHCPYHFN*TIQKLLYRVRQKKDIFASESLPLLFSCKK 1214 HSP 5 Score: 237.503 bits (512), Expect = 0 Query: 2 SPLDA*HRIAFFRNAAVQNLSAQWLNFHFCPKRESKLVTIQELVHEVCQMQINHAXMVX*NXLARYLVKXLXXRSQILVPVRMRKRG*IIQSQAAACLI*KFLASPMLMGVQLS*RLIVII 364 HSP 6 Score: 192.14 bits (413), Expect = 0 Query: 971 SSCRRRGEGGSHWQKYLSFAAPCIIVFVLFN*NDRGNGRFSKSPSFW*SILGGCNIPSSFIFVVFDDGNTEK*SVQVRRGS 1213 HSP 7 Score: 190.307 bits (409), Expect = 0 Query: 402 RIFIFY*FCVLVGQISYCFYQLSCAVXQERAAATFAVSC*E**TKCEWCIASFSIEGNK*QQWSEGNK*QQWXG*LSGV*ESRGCESAAIHSRYETEAR*IL 707 HSP 8 Score: 148.152 bits (317), Expect = 0 Query: 702 IL*DAXTNWV*SSVEFTAXGKGGGWNECSGKGSSCWGTMHXCFRSRESH*NALC*F*XVWWGAEWEHN 905 HSP 9 Score: 41.3897 bits (84), Expect = 0 Query: 926 EVRGT*AGSRCIPRASSCRR 985 HSP 10 Score: 36.8076 bits (74), Expect = 0 Query: 367 VPMSYGFWDGNKGFSSFT 420 HSP 11 Score: 235.212 bits (507), Expect = 0 Query: 3 *LLLSIFRRAELPSTLGMPEIXXXXXXXXXXXXFTPFSSFSRVLEFDFCVEXVLLSIWPKSFTSPXLHGLSASDKLRERALEWSLVCSLFWDRSGSSATELRGFELLHF*RKQSCVMHRVE 365 HSP 12 Score: 187.1 bits (402), Expect = 0 Query: 974 TAPPNLHGLFFCISIIKYNKYKATGNITTT*NTLPKRRTF*EPSIAPIILIEQYKNYYTGCGKRKIFLPVRASLSSSPAR 1213 HSP 13 Score: 134.406 bits (287), Expect = 0 Query: 813 LFSCKKRPSECIYYLPMSPLPLQDSSSLIMLPLCPPPYXSELAKCILMAFTGSETLVHG 989 HSP 14 Score: 110.121 bits (234), Expect = 0 Query: 402 DGKTGNTPFTFRSLLLTTDCXGGCGSFLXDGTG*LVKAVGYLANKNAESVKDENP 566 HSP 15 Score: 63.3837 bits (132), Expect = 0 Query: 621 NLSCLCFISTVNGCTFAPSRLLYT**SA 704 HSP 16 Score: 44.5971 bits (91), Expect = 0 Query: 702 CGCKLDTASNPVRLXISEN 758 HSP 17 Score: 34.9748 bits (70), Expect = 0 Query: 361 FIPIPKAITHRNVI 402 HSP 18 Score: 30.3927 bits (60), Expect = 0 Query: 563 LHCCYLFPSM 592 HSP 19 Score: 183.893 bits (395), Expect = 0 Query: 976 LQEKRRGRLSLAKISFFCRTLYNSFCIVQLK**GQWTVLKKSVFLVKYFRWL*YSQ*LYICCI**WKYRKIIRAS*EGQF 1215 HSP 20 Score: 165.564 bits (355), Expect = 0 Query: 3 LHSMHDTGLLSSEMQQFKTSQLSG*TSTSVPKERAN**PFKSSFTKFVRCR*TMQXW*XKTXWPDT**NXFXXEVKF*YP* 245 HSP 21 Score: 134.864 bits (288), Expect = 0 Query: 814 PCTSVSDPVKAIKMHFANSDQYGGGQSGSIIREEESWRGKGDIGR**MHSEGLFLQEKR 990 HSP 22 Score: 134.406 bits (287), Expect = 0 Query: 526 NERNVNGVLPVFPSREISSSNGVREISSSNGVADYQVYRSREGAKVQPFTVDMKQRQD 699 HSP 23 Score: 54.6777 bits (113), Expect = 0 Query: 282 QQLV*FKNFWHPQC*WEFSSPED* 353 HSP 24 Score: 52.3867 bits (108), Expect = 0 Query: 403 GFSSFTDSAFLLAKYPTAFTSY 468 HSP 25 Score: 40.4733 bits (82), Expect = 0 Query: 703 FSEMXRRTGFEAVSSLQPQ 759 HSP 26 Score: 30.8509 bits (61), Expect = 0 Query: 369 SDELWLLGWE* 401 HSP 27 Score: 163.731 bits (351), Expect = 3.51092e-166 Query: 1009 KLPLLTCTDYFSVFPSSNTTNIKLLGILQPPKILYQKDGLFENRPLPLSF*LNNTKTIIQGAAKERYFC 1215 HSP 28 Score: 135.322 bits (289), Expect = 3.51092e-166 Query: 523 ILPLFHIYCEWLHFRTLSTPIHLIISHXIAATYFPHSIAATYFPRWKNWQYTIHISFIT 699 HSP 29 Score: 133.031 bits (284), Expect = 3.51092e-166 Query: 701 APHHTXQN*QSAF*WLSRDRKHXCMVPQQELPFPLHSFQPPPFPXAVNSTLLQTQFVXASQRI 889 HSP 30 Score: 75.2971 bits (158), Expect = 3.51092e-166 Query: 1 GQKWKFSH*AERF*TAAFLKKAILCHASSGD 93 HSP 31 Score: 67.9658 bits (142), Expect = 3.51092e-166 Query: 262 VIITINLQES*TPINIGDARNF*IRQAAA*LWIIH 366 HSP 32 Score: 50.5539 bits (104), Expect = 3.51092e-166 Query: 142 CFTKYLAKXFYXTIXAWFICI*Q 210 HSP 33 Score: 45.9718 bits (94), Expect = 3.51092e-166 Query: 403 ITGKSSRIFGQQERRISKR*KS 468 HSP 34 Score: 33.1419 bits (66), Expect = 3.51092e-166 Query: 362 ILYSHPKSHNSSERN 406 HSP 35 Score: 30.3927 bits (60), Expect = 3.51092e-166 Query: 947 SSPARRGPRNASTT 988 HSP 36 Score: 180.685 bits (388), Expect = 1.80054e-150 Query: 975 LAGEEEREALTGKNIFLLPHPV**FLYCSIKMIGAMDGSQKVRLFGKVF*VVVIFPVALYLLYLMMEIQKNNPCKLGGAV 1214 HSP 37 Score: 166.022 bits (356), Expect = 1.80054e-150 Query: 1 ISTRCMTQDCFLQKCSSSKPLSSVAELPLLSQKREQTXXXXXXXXXXXXXXXKPCXNGDVKLFGQILXXXXXXXXXXXXXRENEEKGVXXXXXXXXXXXXXXXGIPNVDGSSALLKIDSNNYV 369 HSP 38 Score: 123.409 bits (263), Expect = 1.80054e-150 Query: 500 HLXSQLLRVMNEM*MVYCQFFHRGK*VAAME*GK*VAAMXWLIIRCIGVERVRKCSHSQ*I*NRGKI 700 HSP 39 Score: 48.2628 bits (99), Expect = 1.80054e-150 Query: 812 DHAXVFPIP*KPLKCTLLILXSMV 883 HSP 40 Score: 39.0986 bits (79), Expect = 1.80054e-150 Query: 704 SLRCXDELGLKQCRVYSXR 760 HSP 41 Score: 39.0986 bits (79), Expect = 1.80054e-150 Query: 939 HRQVVDAFRGPLLAGEE 989 HSP 42 Score: 38.1822 bits (77), Expect = 1.80054e-150 Query: 404 DFHLLLILRSCWPN 445 HSP 43 Score: 29.4763 bits (58), Expect = 1.80054e-150 Query: 350 LIVIITFR*VMAFGMGIK 403 | ||||
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Blast Hits to Contigs V2 CCall
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_CCall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
CCall_contig39880_v2 | 0 | 85.61% | ||
CCall_contig39880_v2 | ||||
HSP 1 Score: 275.992 bits (596), Expect = 0 Query: 2 SHPKSHNSSERNYYYQSSGELNSHQHWGCQKFLN*TSCCLTLDYSPPFPHSHGY*NLTSXXKXFY*VSGQXVLXHHXCMVYLHLTNFVNELLNGH*FALSFGTEVEVQPLS*EVLNCCISEESNPVSCIEWR 397 HSP 2 Score: 199.93 bits (430), Expect = 0 Query: 703 ALGMHLLPAYVPLTSPXFLLPNYAPTLPPTILXRISKVHFNGFHGIGNTXAWSPNKNSPSHYIHSNHPPSLXL*TRHCFKPSSSXHLRE 969 HSP 3 Score: 199.472 bits (429), Expect = 0 Query: 404 IYLASVSYLL*MAALSHPLDSYTPDNQPXHCCYLFPSLHCCYLFPSMEKLAIHHSHFVHYS*QLTAKVAAALSWXTAQDNW*KQ*DIWPTRTQNQ*KMKI 703 HSP 4 Score: 190.766 bits (410), Expect = 0 Query: 972 NCPS*LARIIFLYFHHQIQQI*SYWEYYNHLKYFTKKTDFLRTVHCPYHFN*TIQKLLYRVRQKKDIFASESLPLLFSCKK 1214 HSP 5 Score: 237.503 bits (512), Expect = 0 Query: 2 SPLDA*HRIAFFRNAAVQNLSAQWLNFHFCPKRESKLVTIQELVHEVCQMQINHAXMVX*NXLARYLVKXLXXRSQILVPVRMRKRG*IIQSQAAACLI*KFLASPMLMGVQLS*RLIVII 364 HSP 6 Score: 192.14 bits (413), Expect = 0 Query: 971 SSCRRRGEGGSHWQKYLSFAAPCIIVFVLFN*NDRGNGRFSKSPSFW*SILGGCNIPSSFIFVVFDDGNTEK*SVQVRRGS 1213 HSP 7 Score: 190.307 bits (409), Expect = 0 Query: 402 RIFIFY*FCVLVGQISYCFYQLSCAVXQERAAATFAVSC*E**TKCEWCIASFSIEGNK*QQWSEGNK*QQWXG*LSGV*ESRGCESAAIHSRYETEAR*IL 707 HSP 8 Score: 148.152 bits (317), Expect = 0 Query: 702 IL*DAXTNWV*SSVEFTAXGKGGGWNECSGKGSSCWGTMHXCFRSRESH*NALC*F*XVWWGAEWEHN 905 HSP 9 Score: 41.3897 bits (84), Expect = 0 Query: 926 EVRGT*AGSRCIPRASSCRR 985 HSP 10 Score: 36.8076 bits (74), Expect = 0 Query: 367 VPMSYGFWDGNKGFSSFT 420 HSP 11 Score: 235.212 bits (507), Expect = 0 Query: 3 *LLLSIFRRAELPSTLGMPEIXXXXXXXXXXXXFTPFSSFSRVLEFDFCVEXVLLSIWPKSFTSPXLHGLSASDKLRERALEWSLVCSLFWDRSGSSATELRGFELLHF*RKQSCVMHRVE 365 HSP 12 Score: 187.1 bits (402), Expect = 0 Query: 974 TAPPNLHGLFFCISIIKYNKYKATGNITTT*NTLPKRRTF*EPSIAPIILIEQYKNYYTGCGKRKIFLPVRASLSSSPAR 1213 HSP 13 Score: 134.406 bits (287), Expect = 0 Query: 813 LFSCKKRPSECIYYLPMSPLPLQDSSSLIMLPLCPPPYXSELAKCILMAFTGSETLVHG 989 HSP 14 Score: 110.121 bits (234), Expect = 0 Query: 402 DGKTGNTPFTFRSLLLTTDCXGGCGSFLXDGTG*LVKAVGYLANKNAESVKDENP 566 HSP 15 Score: 63.3837 bits (132), Expect = 0 Query: 621 NLSCLCFISTVNGCTFAPSRLLYT**SA 704 HSP 16 Score: 44.5971 bits (91), Expect = 0 Query: 702 CGCKLDTASNPVRLXISEN 758 HSP 17 Score: 34.9748 bits (70), Expect = 0 Query: 361 FIPIPKAITHRNVI 402 HSP 18 Score: 30.3927 bits (60), Expect = 0 Query: 563 LHCCYLFPSM 592 HSP 19 Score: 183.893 bits (395), Expect = 0 Query: 976 LQEKRRGRLSLAKISFFCRTLYNSFCIVQLK**GQWTVLKKSVFLVKYFRWL*YSQ*LYICCI**WKYRKIIRAS*EGQF 1215 HSP 20 Score: 165.564 bits (355), Expect = 0 Query: 3 LHSMHDTGLLSSEMQQFKTSQLSG*TSTSVPKERAN**PFKSSFTKFVRCR*TMQXW*XKTXWPDT**NXFXXEVKF*YP* 245 HSP 21 Score: 134.864 bits (288), Expect = 0 Query: 814 PCTSVSDPVKAIKMHFANSDQYGGGQSGSIIREEESWRGKGDIGR**MHSEGLFLQEKR 990 HSP 22 Score: 134.406 bits (287), Expect = 0 Query: 526 NERNVNGVLPVFPSREISSSNGVREISSSNGVADYQVYRSREGAKVQPFTVDMKQRQD 699 HSP 23 Score: 54.6777 bits (113), Expect = 0 Query: 282 QQLV*FKNFWHPQC*WEFSSPED* 353 HSP 24 Score: 52.3867 bits (108), Expect = 0 Query: 403 GFSSFTDSAFLLAKYPTAFTSY 468 HSP 25 Score: 40.4733 bits (82), Expect = 0 Query: 703 FSEMXRRTGFEAVSSLQPQ 759 HSP 26 Score: 30.8509 bits (61), Expect = 0 Query: 369 SDELWLLGWE* 401 HSP 27 Score: 163.731 bits (351), Expect = 3.64862e-166 Query: 1009 KLPLLTCTDYFSVFPSSNTTNIKLLGILQPPKILYQKDGLFENRPLPLSF*LNNTKTIIQGAAKERYFC 1215 HSP 28 Score: 135.322 bits (289), Expect = 3.64862e-166 Query: 523 ILPLFHIYCEWLHFRTLSTPIHLIISHXIAATYFPHSIAATYFPRWKNWQYTIHISFIT 699 HSP 29 Score: 133.031 bits (284), Expect = 3.64862e-166 Query: 701 APHHTXQN*QSAF*WLSRDRKHXCMVPQQELPFPLHSFQPPPFPXAVNSTLLQTQFVXASQRI 889 HSP 30 Score: 75.2971 bits (158), Expect = 3.64862e-166 Query: 1 GQKWKFSH*AERF*TAAFLKKAILCHASSGD 93 HSP 31 Score: 67.9658 bits (142), Expect = 3.64862e-166 Query: 262 VIITINLQES*TPINIGDARNF*IRQAAA*LWIIH 366 HSP 32 Score: 50.5539 bits (104), Expect = 3.64862e-166 Query: 142 CFTKYLAKXFYXTIXAWFICI*Q 210 HSP 33 Score: 45.9718 bits (94), Expect = 3.64862e-166 Query: 403 ITGKSSRIFGQQERRISKR*KS 468 HSP 34 Score: 33.1419 bits (66), Expect = 3.64862e-166 Query: 362 ILYSHPKSHNSSERN 406 HSP 35 Score: 30.3927 bits (60), Expect = 3.64862e-166 Query: 947 SSPARRGPRNASTT 988 HSP 36 Score: 180.685 bits (388), Expect = 1.87116e-150 Query: 975 LAGEEEREALTGKNIFLLPHPV**FLYCSIKMIGAMDGSQKVRLFGKVF*VVVIFPVALYLLYLMMEIQKNNPCKLGGAV 1214 HSP 37 Score: 166.022 bits (356), Expect = 1.87116e-150 Query: 1 ISTRCMTQDCFLQKCSSSKPLSSVAELPLLSQKREQTXXXXXXXXXXXXXXXKPCXNGDVKLFGQILXXXXXXXXXXXXXRENEEKGVXXXXXXXXXXXXXXXGIPNVDGSSALLKIDSNNYV 369 HSP 38 Score: 123.409 bits (263), Expect = 1.87116e-150 Query: 500 HLXSQLLRVMNEM*MVYCQFFHRGK*VAAME*GK*VAAMXWLIIRCIGVERVRKCSHSQ*I*NRGKI 700 HSP 39 Score: 48.2628 bits (99), Expect = 1.87116e-150 Query: 812 DHAXVFPIP*KPLKCTLLILXSMV 883 HSP 40 Score: 39.0986 bits (79), Expect = 1.87116e-150 Query: 704 SLRCXDELGLKQCRVYSXR 760 HSP 41 Score: 39.0986 bits (79), Expect = 1.87116e-150 Query: 939 HRQVVDAFRGPLLAGEE 989 HSP 42 Score: 38.1822 bits (77), Expect = 1.87116e-150 Query: 404 DFHLLLILRSCWPN 445 HSP 43 Score: 29.4763 bits (58), Expect = 1.87116e-150 Query: 350 LIVIITFR*VMAFGMGIK 403 | ||||
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Blast Hits to MedicagoProt
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_MedicagoProt_20080227)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
IMGA|AC126015_4.4 Homeodomain-related chr01_p | 1.14414e-48 | 38.74% | ||
eudomolecule_IMGAG_V2 25264606-25273328 E EGN_Mt071002 20080227 | ||||
HSP 1 Score: 190.274 bits (482), Expect = 1.14414e-48 Query: 64 SSVAELPLLSQKREQTXXXXXXXXXXXXXXXKPCXNGDVKLFGQILXXXXXXXXXXXXXRENEEKGVXXXXXXXXXXXXXXXGIPNVDGSSALLKIDSNNYVPMSYGFWDGN------KGFSSFTDSAFLLAKYPTAFTSYXXXXXXXXXXXXXXXXXXXNERNVNGVLPVFPSREISSSNGVREISSSNGVADYQVYRSREGAKVQPFTVDMKQRQDRFSEMXRRTGFEAVSSLQPQ-XXXXXXXXXXXXXXXXXXPCTSVSDPVKAIKMHFANSDQYGGGQSGSIIREEESWRGKGDIGR 948 | ||||
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Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_PopulusProt_JamboreeModels1_1)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
eugene3.00102138 | 9.40093e-53 | 42.15% | ||
jgi|Poptr1_1|567580|eugene3.00102138 | ||||
HSP 1 Score: 204.527 bits (519), Expect = 9.40093e-53 Query: 1 ISTRCMTQDCFLQKCSSSKPLSSVAELPLLSQKREQTXXXXXXXXXXXXXXXKPCXNGDVKLFGQILXXXXXXXXXXXXXRENEEKGVXXXXXXXXXXXXXXXGIPNVDGSSALLKIDSNNY-----VPM-SYGFWDGNK---GFSSFTDSAFLLAKYPTAFTSYXXXXXXXXXXXXXXXXXXXNERNVNGVLPVFPSREISSSNGVREISSSNGVADYQVYRSREGAKVQPFTVDMKQRQDRFSEMXRRTGFEAVSSLQPQXXXXXXXXXXXXXXXXXXPCTSVSDPVKAIKMHFANSDQYGGGQSGSIIREEESWRGKGDIGR 948 | ||||
estExt_fgenesh4_pg.C_LG_VIII0326 | 6.13605e-28 | 37.05% | ||
jgi|Poptr1_1|820268|estExt_fgenesh4_pg.C_LG_VIII0326 | ||||
HSP 1 Score: 122.094 bits (305), Expect = 6.13605e-28 Query: 1 ISTRCMTQDCFLQKCSSSKPLSSVAELPLLSQKREQTXXXXXXXXXXXXXXXKPCXNGDVKLFGQILXXXXXXXXXXXXXRENEEKGVXXXXXXXXXXXXXXXGIPNVDGSSALLKIDSNNYV-----PMSYGFWDGNKGFSSFTDSAFLLAKYPTAFTSYXXXXXXXXXXXXXXXXXXXNERNVNGVLPVFPSREISSSNGVREISSSNGVADYQVYRSREGA 657 | ||||
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Blast Hits to Contig V2 RO454
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_RO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
RO454_contig3084_v2 | 0 | 98.59% | ||
RO454_contig3084_v2 | ||||
HSP 1 Score: 346.557 bits (750), Expect = 0 Query: 278 IYLASVSYLL*MAALSHPLDSYTPDNQPXHCCYLFPSLHCCYLFPSMEKLAIHHSHFVHYS*QLTAKVAAALSWXTAQDNW*KQ*DIWPTRTQNQ*KMKILYSHPKSHNSSERNYYYQSSGELNSHQHWGCQKFLN*TSCCL 703 HSP 2 Score: 211.843 bits (456), Expect = 0 Query: 947 *TAPPNLHGLFFCISIIKYNKYKATGNITTT*NTLPKRRTF*EPSIAPIILIEQYKNYYTGCGKRKIFLPVRASLSSSPARRGPRNASTT 1216 HSP 3 Score: 210.469 bits (453), Expect = 0 Query: 703 ALGMHLLPAYVPLTSPXFLLPNYAPTLPPTILXRISKVHFNGFHGIGNTXAWSPNKNSPSHYIHSNHPPSLXL*TRHCFKPSSSXHLRE 969 HSP 4 Score: 315.398 bits (682), Expect = 0 Query: 282 QQLV*FKNFWHPQC*WEFSSPED****LRSDELWLLGWE*RIFIFY*FCVLVGQISYCFYQLSCAVXQERAAATFAVSC*E**TKCEWCIASFSIEGNK*QQWSEGNK*QQWXG*LSGV*ESRGCESAAIHSRYETEAR 698 HSP 5 Score: 230.63 bits (497), Expect = 0 Query: 926 EVRGT*AGSRCIPRASSCRRRGEGGSHWQKYLSFAAPCIIVFVLFN*NDRGNGRFSKSPSFW*SILGGCNIPSSFIFVVFDDGNTEK*SVQVRRGSL 1216 HSP 6 Score: 161.44 bits (346), Expect = 0 Query: 702 IL*DAXTNWV*SSVEFTAXGKGGGWNECSGKGSSCWGTMHXCFRSRESH*NALC*F*XVWWGAEWEHN 905 HSP 7 Score: 321.813 bits (696), Expect = 6.95038e-171 Query: 813 LNCPS*LARIIFLYFHHQIQQI*SYWEYYNHLKYFTKKTDFLRTVHCPYHFN*TIQKLLYRVRQKKDIFASESLPLLFSCKKRPSECIYYLPMSPLPLQDSSSLIMLPLCPPPYXSELAKCILMAFTGSETLVHG 1217 HSP 8 Score: 150.902 bits (323), Expect = 6.95038e-171 Query: 523 ILPLFHIYCEWLHFRTLSTPIHLIISHXIAATYFPHSIAATYFPRWKNWQYTIHISFIT 699 HSP 9 Score: 140.363 bits (300), Expect = 6.95038e-171 Query: 277 ITGKSSRIFGQQERRISKR*KSFIPIPKAITHRNVIITINLQES*TPINIGDARNF*IRQAAA* 468 HSP 10 Score: 44.5971 bits (91), Expect = 6.95038e-171 Query: 702 CGCKLDTASNPVRLXISEN 758 HSP 11 Score: 309.442 bits (669), Expect = 8.0861e-166 Query: 814 PCTSVSDPVKAIKMHFANSDQYGGGQSGSIIREEESWRGKGDIGR**MHSEGLFLQEKRRGRLSLAKISFFCRTLYNSFCIVQLK**GQWTVLKKSVFLVKYFRWL*YSQ*LYICCI**WKYRKIIRAS*EGQF 1215 HSP 12 Score: 270.494 bits (584), Expect = 8.0861e-166 Query: 278 QAAACLI*KFLASPMLMGVQLS*RLIVIITFR*VMAFGMGIKDFHLLLILRSCWPNXXXXXXXXXXXXXXKSRSHLXSQLLRVMNEM*MVYCQFFHRGK*VAAME*GK*VAAMXWLIIRCIGVERVRKCSHSQ*I*NRGKI 700 HSP 13 Score: 41.3897 bits (84), Expect = 8.0861e-166 Query: 704 SLRCXDELGLKQCRVYSXR 760 HSP 14 Score: 200.846 bits (432), Expect = 1.73314e-147 Query: 303 DGKTGNTPFTFRSLLLTTDCXGGCGSFLXDGTG*LVKAVGYLANKNAESVKDENPLFPSQKP*LIGT*LLLSIFRRAELPSTLGMPEI 566 HSP 15 Score: 167.397 bits (359), Expect = 1.73314e-147 Query: 1009 KLPLLTCTDYFSVFPSSNTTNIKLLGILQPPKILYQKDGLFENRPLPLSF*LNNTKTIIQGAAKERYFC 1215 HSP 16 Score: 141.279 bits (302), Expect = 1.73314e-147 Query: 701 APHHTXQN*QSAF*WLSRDRKHXCMVPQQELPFPLHSFQPPPFPXAVNSTLLQTQFVXASQRI 889 HSP 17 Score: 63.8419 bits (133), Expect = 1.73314e-147 Query: 621 LSCLCFISTVNGCTFAPSRLLYT**SA 701 HSP 18 Score: 24.8942 bits (48), Expect = 1.73314e-147 Query: 563 CCYLFPSM 586 HSP 19 Score: 212.301 bits (457), Expect = 1.14138e-140 Query: 939 HRQVVDAFRGPLLAGEEEREALTGKNIFLLPHPV**FLYCSIKMIGAMDGSQKVRLFGKVF*VVVIFPVALYLLYLMMEIQKNNPCKLGGAV* 1217 HSP 20 Score: 137.155 bits (293), Expect = 1.14138e-140 Query: 526 NERNVNGVLPVFPSREISSSNGVREISSSNGVADYQVYRSREGAKVQPFTVDMKQRQD 699 HSP 21 Score: 132.573 bits (283), Expect = 1.14138e-140 Query: 310 GIPNVDGSSALLKIDSNNYVPMSYGFWDGNKGFSSFTDSAFLLAKYPTAFTSY 468 HSP 22 Score: 52.8449 bits (109), Expect = 1.14138e-140 Query: 812 DHAXVFPIP*KPLKCTLLILXSMV 883 HSP 23 Score: 40.4733 bits (82), Expect = 1.14138e-140 Query: 703 FSEMXRRTGFEAVSSLQPQ 759 | ||||
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Blast Hits to Contigs V2 WO454
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_WO454_contigs_v2)
Best 10 Hits Shown
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Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
WO454_contig13442_v2 | 1.66595e-148 | 96.64% | ||
WO454_contig13442_v2 | ||||
HSP 1 Score: 362.594 bits (785), Expect = 1.66595e-148 Query: 523 ALGMHLLPAYVPLTSPXFLLPNYAPTLPPTILXRISKVHFNGFHGIGNTXAWSPNKNSPSHYIHSNHPPSLXL*TRHCFKPSSSXHLRESILPLFHIYCEWLHFRTLSTPIHLIISHXIAATYFPHSIAATYFPRWKNWQYTIHISFIT 969 HSP 2 Score: 180.685 bits (388), Expect = 1.66595e-148 Query: 947 ISIIKYNKYKATGNITTT*NTLPKRRTF*EPSIAPIILIEQYKNYYTGCGKRKIFLPVRASLSSSPARRGPRNASTT 1177 HSP 3 Score: 325.479 bits (704), Expect = 2.42756e-145 Query: 474 AVXQERAAATFAVSC*E**TKCEWCIASFSIEGNK*QQWSEGNK*QQWXG*LSGV*ESRGCESAAIHSRYETEAR*IL*DAXTNWV*SSVEFTAXGKGGGWNECSGKGSSCWGTMHXCFRSRESH*NALC*F*XVWWGAEWEHN 905 HSP 4 Score: 207.261 bits (446), Expect = 2.42756e-145 Query: 926 EVRGT*AGSRCIPRASSCRRRGEGGSHWQKYLSFAAPCIIVFVLFN*NDRGNGRFSKSPSFW*SILGGCNIPSSFIFVVFDDGN 1177 HSP 5 Score: 286.989 bits (620), Expect = 8.40829e-130 Query: 814 PCTSVSDPVKAIKMHFANSDQYGGGQSGSIIREEESWRGKGDIGR**MHSEGLFLQEKRRGRLSLAKISFFCRTLYNSFCIVQLK**GQWTVLKKSVFLVKYFRWL*YSQ*LYICCI**WK 1176 HSP 6 Score: 193.973 bits (417), Expect = 8.40829e-130 Query: 491 SRSHLXSQLLRVMNEM*MVYCQFFHRGK*VAAME*GK*VAAMXWLIIRCIGVERVRKCSHSQ*I*NRGKIDSLRCXDELGLKQCRVYSXR 760 HSP 7 Score: 299.361 bits (647), Expect = 3.84396e-126 Query: 813 FHHQIQQI*SYWEYYNHLKYFTKKTDFLRTVHCPYHFN*TIQKLLYRVRQKKDIFASESLPLLFSCKKRPSECIYYLPMSPLPLQDSSSLIMLPLCPPPYXSELAKCILMAFTGSETLVHG 1175 HSP 8 Score: 108.746 bits (231), Expect = 3.84396e-126 Query: 621 CGCKLDTASNPVRLXISENLSCLCFISTVNGCTFAPSRLLYT**SA 758 HSP 9 Score: 68.8822 bits (144), Expect = 3.84396e-126 Query: 474 DGKTGNTPFTFRSLLLTTDCXGGCGSFLXDG 566 HSP 10 Score: 30.3927 bits (60), Expect = 3.84396e-126 Query: 563 LHCCYLFPSM 592 HSP 11 Score: 321.813 bits (696), Expect = 1.18523e-122 Query: 473 APHHTXQN*QSAF*WLSRDRKHXCMVPQQELPFPLHSFQPPPFPXAVNSTLLQTQFVXASQRIYLASVSYLL*MAALSHPLDSYTPDNQPXHCCYLFPSLHCCYLFPSMEKLAIHHSHFVHYS*QLTAKVAAALSWXTA 889 HSP 12 Score: 135.322 bits (289), Expect = 1.18523e-122 Query: 1009 FPSSNTTNIKLLGILQPPKILYQKDGLFENRPLPLSF*LNNTKTIIQGAAKERYFC 1176 HSP 13 Score: 182.06 bits (391), Expect = 1.95568e-103 Query: 939 HRQVVDAFRGPLLAGEEEREALTGKNIFLLPHPV**FLYCSIKMIGAMDGSQKVRLFGKVF*VVVIFPVALYLLYLMME 1175 HSP 14 Score: 179.769 bits (386), Expect = 1.95568e-103 Query: 526 NERNVNGVLPVFPSREISSSNGVREISSSNGVADYQVYRSREGAKVQPFTVDMKQRQDRFSEMXRRTGFEAVSSLQPQ 759 HSP 15 Score: 50.5539 bits (104), Expect = 1.95568e-103 Query: 812 DHAXVFPIP*KPLKCTLLILXSMV 883 | ||||
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