Oall_contig38666_v2
| Name | Oall_contig38666_v2 |
|---|---|
| Accession | ID7168657 |
| Sequence | TGTGGCACAACCGTCAATTGTATTTGTATTTCCACTGTAAACCTCGTTTG |
| Length | 1030 |
| Type | contig |
| Organism | Oak |
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References
| Dababase | Accession |
|---|---|
| GFF_source | SeqManPro |
ESTs in this contig
| Type | Feature | Position | ||
|---|---|---|---|---|
| EST | ROA_020071_2704_2192 | 0-224 | ||
| EST | ROB_119222_1442_0710 | 80-331 | ||
| EST | ROB_088674_1200_3020 | 95-344 | ||
| EST | WOB_111984_1614_1329 | 119-375 | ||
| EST | ROA_046606_2356_1523 | 158-400 | ||
| EST | ROA_075987_2248_1671 | 158-400 | ||
| point_mutation | Oall_contig38666_v2-snp240 | 239 | 241 | 0 |
| EST | ROB_061616_3420_2379 | 239-470 | ||
| EST | ROB_158325_3985_3293 | 240-470 | ||
| EST | WOA_016417_1708_3113 | 274-527 | ||
| EST | ROB_051332_1305_1671 | 402-629 | ||
| EST | WOB_112089_1442_3319 | 509-762 | ||
| microsatellite | Oall_contig38666_v2-ssr602 | 601 | 616 | 0 |
| EST | ROB_082120_1786_0580 | 650-926 | ||
| EST | gb_EE743776.1 | 760-1,030 |
KEGG Analysis
| Analysis Date: 11-25-2009
(KEGG: Oall_v2) K12603 CNOT6, CCR4; CCR4-NOT transcription complex subunit 6 [EC:3.1.-.-] |
InterProScan Analysis
Analysis Date: 11-20-2009
(Interpro: Oall_contigs_v2)
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Blast Hits to Uniprot
Analysis Date: 11-17-2009 (Blast: Oall_v2_uniprot)
Best 10 Hits Shown | Show Best 25 Hits | Show All Hits
Note: Click a description for more details.
Best 10 Hits Shown | Show Best 25 Hits | Show All Hits
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
B9SYV1_RICCO | 2.59015e-71 | 79.17% | ||
Carbon catabolite repressor protein, putative OS=Ricinus communis GN=RCOM_0041430 PE=4 SV=1 | ||||
HSP 1 Score: 273.092 bits (697), Expect = 2.59015e-71 Query: 23 FEVXRXKTYTPTADDIGHVLKFECVVVEADTKVPVGHANTILTSRVIPAPSPSPRRLVPVNGVDVIGHLDSDGRLSSSGTFTVLSYNILSDVYATSELYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQSDHYEEFFCS*AGQTRLCWSI*EKDKRGLQWKYK 526 | ||||
A9PF97_POPTR | 5.97128e-68 | 76.19% | ||
Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_825136 PE=2 SV=1 | ||||
HSP 1 Score: 261.922 bits (668), Expect = 5.97128e-68 Query: 23 FEVXRXKTYTPTADDIGHVLKFECVVVEADTKVPVGHANTILTSRVIPAPSPSPRRLVPVNGVDVIGHLDSDGRLSSSGTFTVLSYNILSDVYATSELYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQSDHYEEFFCS*AGQTRLCWSI*EKDKRGLQWKYK 526 | ||||
A5AKQ6_VITVI | 5.97128e-68 | 75.60% | ||
Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_044263 PE=4 SV=1 | ||||
HSP 1 Score: 261.922 bits (668), Expect = 5.97128e-68 Query: 23 FEVXRXKTYTPTADDIGHVLKFECVVVEADTKVPVGHANTILTSRVIPAPSPSPRRLVPVNGVDVIGHLDSDGRLSSSGTFTVLSYNILSDVYATSELYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQSDHYEEFFCS*AGQTRLCWSI*EKDKRGLQWKYK 526 | ||||
B9H9Z4_POPTR | 6.60203e-67 | 75.60% | ||
Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_819331 PE=4 SV=1 | ||||
HSP 1 Score: 258.455 bits (659), Expect = 6.60203e-67 Query: 23 FEVXRXKTYTPTADDIGHVLKFECVVVEADTKVPVGHANTILTSRVIPAPSPSPRRLVPVNGVDVIGHLDSDGRLSSSGTFTVLSYNILSDVYATSELYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQSDHYEEFFCS*AGQTRLCWSI*EKDKRGLQWKYK 526 | ||||
A9SPE6_PHYPA | 3.06173e-65 | 70.21% | ||
Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_106817 PE=4 SV=1 | ||||
HSP 1 Score: 211.46 bits (537), Expect = 3.06173e-65 Query: 101 EVXRXKTYTPTADDIGHVLKFECVVVEADTKVPVGHANTILTSRVIPAPSPSPRRLVPVNGVDVIGHLDSDGRLSSSGTFTVLSYNILSDVYATSELYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQSDHYEEFF 523 HSP 2 Score: 61.2326 bits (147), Expect = 3.06173e-65 Query: 1 FFAPELDKHGYVGLYKRKTNEVYSGNTNTIDGCAT 105 | ||||
A7PW11_VITVI | 4.00531e-64 | 73.81% | ||
Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025431001 PE=4 SV=1 | ||||
HSP 1 Score: 249.21 bits (635), Expect = 4.00531e-64 Query: 23 FEVXRXKTYTPTADDIGHVLKFECVVVEADTKVPVGHANTILTSRVIPAPSPSPRRLVPVNGVDVIGHLDSDGRLSSSGTFTVLSYNILSDVYATSELYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQSDHYEEFFCS*AGQTRLCWSI*EKDKRGLQWKYK 526 | ||||
A9TVI2_PHYPA | 3.63805e-63 | 67.38% | ||
Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_108866 PE=4 SV=1 | ||||
HSP 1 Score: 205.682 bits (522), Expect = 3.63805e-63 Query: 101 EVXRXKTYTPTADDIGHVLKFECVVVEADTKVPVGHANTILTSRVIPAPSPSPRRLVPVNGVDVIGHLDSDGRLSSSGTFTVLSYNILSDVYATSELYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQSDHYEEFF 523 HSP 2 Score: 60.077 bits (144), Expect = 3.63805e-63 Query: 1 FFAPELDKHGYVGLYKRKTNEVYSGNTNTIDGCAT 105 | ||||
A9TVC5_PHYPA | 6.74022e-62 | 67.38% | ||
Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_198634 PE=4 SV=1 | ||||
HSP 1 Score: 204.912 bits (520), Expect = 6.74022e-62 Query: 101 EVXRXKTYTPTADDIGHVLKFECVVVEADTKVPVGHANTILTSRVIPAPSPSPRRLVPVNGVDVIGHLDSDGRLSSSGTFTVLSYNILSDVYATSELYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQSDHYEEFF 523 HSP 2 Score: 56.6102 bits (135), Expect = 6.74022e-62 Query: 1 FFAPELDKHGYVGLYKRKTNEVYSGNTNTIDGCAT 105 | ||||
CCR4B_ARATH | 2.05707e-60 | 70.06% | ||
Carbon catabolite repressor protein 4 homolog 2 OS=Arabidopsis thaliana GN=CCR4-2 PE=2 SV=2 | ||||
HSP 1 Score: 236.884 bits (603), Expect = 2.05707e-60 Query: 23 EVXRXKTYTPTADDIGHVLKFECVVVEADTKVPVGHANTILTSRVIPAPSPSPRRLVPVNGVDVIGHLDSDGRLSSSGTFTVLSYNILSDVYATSELYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQSDHYEEFFCS*AGQTRLCWSI*EKDKRGLQWKYK 523 | ||||
Q10R99_ORYSJ | 1.12875e-58 | 65.48% | ||
Os03g0166800 protein OS=Oryza sativa subsp. japonica GN=Os03g0166800 PE=4 SV=1 | ||||
HSP 1 Score: 231.106 bits (588), Expect = 1.12875e-58 Query: 23 FEVXRXKTYTPTADDIGHVLKFECVVVEADTKVPVGHANTILTSRVIPAPSPSPRRLVPVNGVDVIGHLDSDGRLSSSGTFTVLSYNILSDVYATSELYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQSDHYEEFFCS*AGQTRLCWSI*EKDKRGLQWKYK 526 | ||||
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Blast Hits to Contigs V2 AB454
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_AB454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
AB454_contig2164_v2 | 1.11005e-25 | 64.10% | ||
AB454_contig2164_v2 | ||||
HSP 1 Score: 65.2165 bits (136), Expect = 1.11005e-25 Query: 751 PLLHF*N*NIIGIGTWSNVPSLLLSGWWGRCITVDRWXR 867 HSP 2 Score: 46.43 bits (95), Expect = 1.11005e-25 Query: 623 RXVXEXSXXXVVGTCTRMXXXXXXXXXVGTCTHMVVXXXAQVEEVMCT 766 HSP 3 Score: 27.6434 bits (54), Expect = 1.11005e-25 Query: 866 PLFNKSGFDA*SRYLSLTEP 925 HSP 4 Score: 26.2688 bits (51), Expect = 1.11005e-25 Query: 916 CIVCGIQLVQSDPYL 960 HSP 5 Score: 66.1329 bits (138), Expect = 1.61294e-21 Query: 714 IRVQVPTTXXXLXSXTXLQLCISPTTHSIISLERSTTCQYQLCFSFKNAIK 866 HSP 6 Score: 38.6404 bits (78), Expect = 1.61294e-21 Query: 864 KGSVSERYRDQASNPDLLNKG 926 HSP 7 Score: 29.4763 bits (58), Expect = 1.61294e-21 Query: 915 LNKGLTAPIECRTLCSS 965 HSP 8 Score: 64.7583 bits (135), Expect = 2.90011e-15 Query: 659 FIAFLKLKHNWYWHVVERSKLIIEWVVGEMHNCRXVXEXSXXXVVGTCTRMXXXXXXXXXVGTCTHMVV 865 HSP 9 Score: 25.3524 bits (49), Expect = 2.90011e-15 Query: 867 IWIRCLISISFTN*A 911 HSP 10 Score: 22.6031 bits (43), Expect = 2.90011e-15 Query: 914 LHSVRHSIGAVRPLFN 961 HSP 11 Score: 58.8016 bits (122), Expect = 2.04235e-13 Query: 752 LXHXSTVMHLPHHPLNNKLGTFDHVPIPIMF*F*KCNKG 868 HSP 12 Score: 23.9778 bits (46), Expect = 2.04235e-13 Query: 914 VK*GSDCTN*MPHTMQ 961 HSP 13 Score: 23.5196 bits (45), Expect = 2.04235e-13 Query: 865 RAQLVKDIEIKHRIQI 912 | ||||
AB454_contig2820_v2 | 3.35078e-11 | 85.00% | ||
AB454_contig2820_v2 | ||||
HSP 1 Score: 41.8479 bits (85), Expect = 3.35078e-11 Query: 521 QRLNPHCLQQLQRPMX*PFE 580 HSP 2 Score: 33.1419 bits (66), Expect = 3.35078e-11 Query: 623 TCTRMXXXXXXXXXVGTCTHMVVXXXAQVEEVMCT 727 HSP 3 Score: 23.5196 bits (45), Expect = 3.35078e-11 Query: 751 WWGRCITVDRWXR 789 | ||||
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Blast Hits to Contigs V2 ABall
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_ABall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
ABall_contig2238_v2 | 1.38918e-22 | 64.10% | ||
ABall_contig2238_v2 | ||||
HSP 1 Score: 65.2165 bits (136), Expect = 1.38918e-22 Query: 751 PLLHF*N*NIIGIGTWSNVPSLLLSGWWGRCITVDRWXR 867 HSP 2 Score: 46.43 bits (95), Expect = 1.38918e-22 Query: 623 RXVXEXSXXXVVGTCTRMXXXXXXXXXVGTCTHMVVXXXAQVEEVMCT 766 HSP 3 Score: 26.2688 bits (51), Expect = 1.38918e-22 Query: 866 KSGFDA*SRYLSLTEP 913 HSP 4 Score: 66.1329 bits (138), Expect = 1.16518e-17 Query: 714 IRVQVPTTXXXLXSXTXLQLCISPTTHSIISLERSTTCQYQLCFSFKNAIK 866 HSP 5 Score: 37.724 bits (76), Expect = 1.16518e-17 Query: 864 KGSVSERYRDQASNPD 911 HSP 6 Score: 64.7583 bits (135), Expect = 1.3065e-13 Query: 659 FIAFLKLKHNWYWHVVERSKLIIEWVVGEMHNCRXVXEXSXXXVVGTCTRMXXXXXXXXXVGTCTHMVV 865 HSP 7 Score: 25.3524 bits (49), Expect = 1.3065e-13 Query: 867 IWIRCLISISFTN*A 911 HSP 8 Score: 58.8016 bits (122), Expect = 2.52124e-11 Query: 752 LXHXSTVMHLPHHPLNNKLGTFDHVPIPIMF*F*KCNKG 868 HSP 9 Score: 23.5196 bits (45), Expect = 2.52124e-11 Query: 865 RAQLVKDIEIKHRIQI 912 | ||||
ABall_contig2597_v2 | 1.38079e-11 | 85.00% | ||
ABall_contig2597_v2 | ||||
HSP 1 Score: 41.8479 bits (85), Expect = 1.38079e-11 Query: 521 QRLNPHCLQQLQRPMX*PFE 580 HSP 2 Score: 41.3897 bits (84), Expect = 1.38079e-11 Query: 623 KLIIEWVVGEMHNCRXVXEXSXXXVVGTCTRMXXXXXXXXXVGTCTHMVVXXXAQVEEVMCT 808 | ||||
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Blast Hits to Contigs V2 AC454
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_AC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
AC454_contig8249_v2 | 3.1033e-67 | 98.67% | ||
AC454_contig8249_v2 | ||||
HSP 1 Score: 185.267 bits (398), Expect = 3.1033e-67 Query: 101 HLDSDGRLSSSGTFTVLSYNILSDVYATSELYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQSDHYEEFF 325 HSP 2 Score: 87.2105 bits (184), Expect = 3.1033e-67 Query: 1 FFAPELDKHGYVGLYKRKTNEVYSGNTNTIDGCAT 105 HSP 3 Score: 167.855 bits (360), Expect = 7.12813e-59 Query: 94 RSKKTPHSDHFEPPEDKQYLHGSQLFLLTNFVCDKAKKEPKRGSNCIVHLWHTHQTKCCKRAQ*KFLRMKDGHR 315 HSP 4 Score: 76.6717 bits (161), Expect = 7.12813e-59 Query: 6 HNRQLYLYFHCKPRLSFSYIDQHNRVCPAQEQK 104 HSP 5 Score: 158.233 bits (339), Expect = 1.00866e-55 Query: 103 I*IPMAVFHPQELSLCSLTTFCLMCMPQVNYTVTAPLGLFLGLIADKIC*EK*LATVQILFVFRRFKVITMRSF 324 HSP 6 Score: 75.7553 bits (159), Expect = 1.00866e-55 Query: 2 FCS*AGQTRLCWSI*EKDKRGLQWKYKYN*RLCH 103 HSP 7 Score: 155.025 bits (332), Expect = 9.17172e-55 Query: 98 AKKLLIVITLNLLKTNNICTVANYFS*QILSAIRPRKSPRGAVTV*FTCGIHIRQNVVREHSESS*G*KTAIGI*M 325 HSP 8 Score: 75.7553 bits (159), Expect = 9.17172e-55 Query: 2 VAQPSIVFVFPL*TSFVFLLYRPT*PCLSSSGAK 103 HSP 9 Score: 152.276 bits (326), Expect = 3.66518e-52 Query: 102 KNSS**SL*TS*RQTISAR*PTISLNKFCLR*GQERAQEGQ*LYSSLVAYTSDKML*ESTVKVPEDERRPSESR 323 HSP 10 Score: 69.7986 bits (146), Expect = 3.66518e-52 Query: 1 CGTTVNCICISTVNLVCLSLI*TNITVFVQLRSKK 105 HSP 11 Score: 106.914 bits (227), Expect = 9.35567e-36 Query: 144 SRFRWPSFILRNFHCALLQHFV*CVCHK*TIQXXXXXXXXXXLSQTKFVKRNSWLPCRYC 323 HSP 12 Score: 60.1762 bits (125), Expect = 9.35567e-36 Query: 6 WTNTVMLVYIRERQTRFTVEIQIQLTVV 89 | ||||
AC454_contig17422_v2 | 7.00808e-39 | 81.54% | ||
AC454_contig17422_v2 | ||||
HSP 1 Score: 114.703 bits (244), Expect = 7.00808e-39 Query: 798 RPGRYEKI*TTA*CAAFNWCSQTLI*QIWIRCLISISFTN*ALYCIFKTKT*LVLARGRTFQAYY 992 HSP 2 Score: 45.9718 bits (94), Expect = 7.00808e-39 Query: 751 LLSGWWGRCITVDRWXR 801 HSP 3 Score: 34.9748 bits (70), Expect = 7.00808e-39 Query: 659 RXVXEXSXXXVVGTCTRMXXXXXXXXXVGTCTHMVV 766 HSP 4 Score: 134.864 bits (288), Expect = 2.3803e-38 Query: 783 PTTHSIISLERSTTCQYQLCFSFKNAIKGSVSERYRDQASNPDLLNKGLTAPIECRTLCSSSDLLVP 983 HSP 5 Score: 40.9315 bits (83), Expect = 2.3803e-38 Query: 714 IRVQVPTTXXXLXSXTXLQLCISPTTHSI 800 HSP 6 Score: 108.746 bits (231), Expect = 1.42581e-33 Query: 787 VREDLNYCIVCGIQLVQSDPYLTNLDSMLDLDIFH*LSPLLHF*N*NIIGIGTWSNVPSLLLSGW 981 HSP 7 Score: 51.0121 bits (105), Expect = 1.42581e-33 Query: 623 SKLIIEWVVGEMHNCRXVXEXSXXXVVGTCTRMXXXXXXXXXVGTCTHMVVXXXAQVEEVMCT 811 HSP 8 Score: 116.536 bits (248), Expect = 8.45176e-32 Query: 802 *AWNVRPRANTNYVLVLKMQ*RAQLVKDIEIKHRIQIC*IRV*LHQLNAAHYAVVQIFSYL 984 HSP 9 Score: 37.2658 bits (75), Expect = 8.45176e-32 Query: 752 LXHXSTVMHLPHHPLN 799 HSP 10 Score: 111.496 bits (237), Expect = 1.15687e-31 Query: 782 GTRRSELLHSVRHSIGAVRPLFNKSGFDA*SRYLSLTEPFIAFLKLKHNWYWHVVERSKLIIEWVVG 982 HSP 11 Score: 41.8479 bits (85), Expect = 1.15687e-31 Query: 623 VVGEMHNCRXVXEXSXXXVVGTCTRMXXXXXXXXXVGTCTHMVVXXXAQVEEVMCT 790 HSP 12 Score: 62.4673 bits (130), Expect = 4.14917e-17 Query: 788 HPLNNKLGTFDHVPIPIMF*F*KCNKGL 871 HSP 13 Score: 34.0583 bits (68), Expect = 4.14917e-17 Query: 911 FVK*GSDCTN*MPHTMQ*FRS 973 HSP 14 Score: 24.8942 bits (48), Expect = 4.14917e-17 Query: 714 IRVQVPTTXXXLXSXTXLQLCISPT 788 | ||||
AC454_contig19011_v2 | 6.20026e-18 | 51.28% | ||
AC454_contig19011_v2 | ||||
HSP 1 Score: 80.7956 bits (170), Expect = 6.20026e-18 Query: 521 EXSXXXVVGTCTRMXXXXXXXXXVGTCTHMVVXXXAQVEEVMCTXXXXXXXXXXXXXHQRLNPHCLQQLQRPMX*PFE 754 HSP 2 Score: 26.2688 bits (51), Expect = 6.20026e-18 Query: 751 GWWGRCITVDRWXR 792 HSP 3 Score: 47.8046 bits (98), Expect = 3.77154e-14 Query: 523 TRD*THIAXNNYKGQCXNHL 582 HSP 4 Score: 46.43 bits (95), Expect = 3.77154e-14 Query: 623 VVGTCTRMXXXXXXXXXVGTCTHMVVXXXAQVEEVMCT 736 | ||||
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Blast Hits to Contigs V2 CC454
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_CC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
CC454_contig11378_v2 | 2.1387e-112 | 97.18% | ||
CC454_contig11378_v2 | ||||
HSP 1 Score: 336.934 bits (729), Expect = 2.1387e-112 Query: 101 FEVXRXKTYTPTADDIGHVLKFECVVVEADTKVPVGHANTILTSRVIPAPSPSPRRLVPVNGVDVIGHLDSDGRLSSSGTFTVLSYNILSDVYATSELYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQSDHYEEFF 526 HSP 2 Score: 87.2105 bits (184), Expect = 2.1387e-112 Query: 1 FFAPELDKHGYVGLYKRKTNEVYSGNTNTIDGCAT 105 HSP 3 Score: 303.485 bits (656), Expect = 1.02534e-100 Query: 102 KNSS**SL*TS*RQTISAR*PTISLNKFCLR*GQERAQEGQ*LYSSLVAYTSDKML*ESTVKVPEDERRPSESRCPITSTPFTGTKRRGLGDGAGMTREVNIVLACPTGTFVSASTTTHSNLRT*PISSAVGVYVLXRXTSN 527 HSP 4 Score: 81.712 bits (172), Expect = 1.02534e-100 Query: 3 WHNRQLYLYFHCKPRLSFSYIDQHNRVCPAQEQK 104 HSP 5 Score: 292.488 bits (632), Expect = 1.85215e-96 Query: 103 LKXVALKHIHQQLMILVMFLSSNVL**RLTQKYPWGMPTLY*LLVSFQLRRLVHVV*YQ*ME*M*LDI*IPMAVFHPQELSLCSLTTFCLMCMPQVNYTVTAPLGLFLGLIADKIC*EK*LATVQILFVFRRFKVITMRSF 525 HSP 6 Score: 78.5046 bits (165), Expect = 1.85215e-96 Query: 2 FCS*AGQTRLCWSI*EKDKRGLQWKYKYN*RLCH 103 HSP 7 Score: 174.728 bits (375), Expect = 6.06385e-90 Query: 94 RSKKTPHSDHFEPPEDKQYLHGSQLFLLTNFVCDKAKKEPKRGSNCIVHLWHTHQTKCCKRAQ*KFLRMKDGHR 315 HSP 8 Score: 117.911 bits (251), Expect = 6.06385e-90 Query: 386 NDTRS*YSVGMPHGYFCVSLYYNTFELKNMTNIISCWCICFKATXFK 526 HSP 9 Score: 75.7553 bits (159), Expect = 6.06385e-90 Query: 2 VAQPSIVFVFPL*TSFVFLLYRPT*PCLSSSGAK 103 HSP 10 Score: 166.022 bits (356), Expect = 3.33502e-84 Query: 98 AKKLLIVITLNLLKTNNICTVANYFS*QILSAIRPRKSPRGAVTV*FTCGIHIRQNVVREHSESS*G*KTAIGI*MSNH 334 HSP 11 Score: 110.579 bits (235), Expect = 3.33502e-84 Query: 373 ATELE*HEKLI*CWHAPRVLLCQPLLQHIRT*EHDQYHQLLVYMF*XDXLQ 525 HSP 12 Score: 72.5479 bits (152), Expect = 3.33502e-84 Query: 1 CGTTVNCICISTVNLVCLSLI*TNITVFVQLRSKK 105 HSP 13 Score: 135.322 bits (289), Expect = 4.25932e-68 Query: 144 KWSRCDWTSRFRWPSFILRNFHCALLQHFV*CVCHK*TIQXXXXXXXXXXLSQTKFVKRNSWLPCRYC 347 HSP 14 Score: 96.3747 bits (204), Expect = 4.25932e-68 Query: 396 I*SXSX*NIYTNS**YWSCS*VRMCCSRG*HKSTRGACQHYINF 527 HSP 15 Score: 63.3837 bits (132), Expect = 4.25932e-68 Query: 3 WTNTVMLVYIRERQTRFTVEIQIQLTVVP 89 | ||||
CC454_contig19675_v2 | 4.11854e-39 | 79.10% | ||
CC454_contig19675_v2 | ||||
HSP 1 Score: 116.078 bits (247), Expect = 4.11854e-39 Query: 782 GTRRSELLHSVRHSIGAVRPLFNKSGFDA*SRYLSLTEPFIAFLKLKHNWYWHVVERSKLIIEWVVG 982 HSP 2 Score: 45.9718 bits (94), Expect = 4.11854e-39 Query: 751 LLSGWWGRCITVDRWXR 801 HSP 3 Score: 34.9748 bits (70), Expect = 4.11854e-39 Query: 659 RXVXEXSXXXVVGTCTRMXXXXXXXXXVGTCTHMVV 766 HSP 4 Score: 27.6434 bits (54), Expect = 4.11854e-39 Query: 623 TCTHMVVXXXAQVEEVMCT 679 HSP 5 Score: 137.613 bits (294), Expect = 6.93212e-39 Query: 783 PTTHSIISLERSTTCQYQLCFSFKNAIKGSVSERYRDQASNPDLLNKGLTAPIECRTLCSSSDLLVP 983 HSP 6 Score: 40.9315 bits (83), Expect = 6.93212e-39 Query: 714 IRVQVPTTXXXLXSXTXLQLCISPTTHSI 800 HSP 7 Score: 114.703 bits (244), Expect = 6.99734e-36 Query: 798 RPGRYEKI*TTA*CAAFNWCSQTLI*QIWIRCLISISFTN*ALYCIFKTKT*LVLARGRTFQAYY 992 HSP 8 Score: 53.7613 bits (111), Expect = 6.99734e-36 Query: 623 SKLIIEWVVGEMHNCRXVXEXSXXXVVGTCTRMXXXXXXXXXVGTCTHMVVXXXAQVEEVMCT 811 HSP 9 Score: 112.412 bits (239), Expect = 1.80231e-32 Query: 787 VREDLNYCIVCGIQLVQSDPYLTNLDSMLDLDIFH*LSPLLHF*N*NIIGIGTWSNVPSLLLSGW 981 HSP 10 Score: 44.5971 bits (91), Expect = 1.80231e-32 Query: 623 VVGEMHNCRXVXEXSXXXVVGTCTRMXXXXXXXXXVGTCTHMVVXXXAQVEEVMCT 790 HSP 11 Score: 116.536 bits (248), Expect = 1.62283e-31 Query: 802 *AWNVRPRANTNYVLVLKMQ*RAQLVKDIEIKHRIQIC*IRV*LHQLNAAHYAVVQIFSYL 984 HSP 12 Score: 37.2658 bits (75), Expect = 1.62283e-31 Query: 752 LXHXSTVMHLPHHPLN 799 HSP 13 Score: 62.4673 bits (130), Expect = 4.99376e-18 Query: 788 HPLNNKLGTFDHVPIPIMF*F*KCNKGL 871 HSP 14 Score: 37.724 bits (76), Expect = 4.99376e-18 Query: 911 FVK*GSDCTN*MPHTMQ*FRS 973 HSP 15 Score: 25.3524 bits (49), Expect = 4.99376e-18 Query: 714 IRVQVPTTXXXLXSXTXLQLCISPT 788 | ||||
CC454_contig3732_v2 | 1.06298e-16 | 50.00% | ||
CC454_contig3732_v2 | ||||
HSP 1 Score: 77.5882 bits (163), Expect = 1.06298e-16 Query: 521 EXSXXXVVGTCTRMXXXXXXXXXVGTCTHMVVXXXAQVEEVMCTXXXXXXXXXXXXXHQRLNPHCLQQLQRPMX*PFE 754 HSP 2 Score: 26.2688 bits (51), Expect = 1.06298e-16 Query: 751 GWWGRCITVDRWXR 792 HSP 3 Score: 46.43 bits (95), Expect = 4.27815e-15 Query: 623 VVGTCTRMXXXXXXXXXVGTCTHMVVXXXAQVEEVMCT 736 HSP 4 Score: 45.9718 bits (94), Expect = 4.27815e-15 Query: 520 TRD*THIAXNNYKGQCXNHLK 582 HSP 5 Score: 23.0613 bits (44), Expect = 4.27815e-15 Query: 760 GWWGRCITVDR 792 | ||||
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Blast Hits to Contigs V2 CCall
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_CCall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
CCall_contig42002_v2 | 2.19808e-112 | 97.18% | ||
CCall_contig42002_v2 | ||||
HSP 1 Score: 336.934 bits (729), Expect = 2.19808e-112 Query: 101 FEVXRXKTYTPTADDIGHVLKFECVVVEADTKVPVGHANTILTSRVIPAPSPSPRRLVPVNGVDVIGHLDSDGRLSSSGTFTVLSYNILSDVYATSELYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQSDHYEEFF 526 HSP 2 Score: 87.2105 bits (184), Expect = 2.19808e-112 Query: 1 FFAPELDKHGYVGLYKRKTNEVYSGNTNTIDGCAT 105 HSP 3 Score: 303.485 bits (656), Expect = 1.05382e-100 Query: 102 KNSS**SL*TS*RQTISAR*PTISLNKFCLR*GQERAQEGQ*LYSSLVAYTSDKML*ESTVKVPEDERRPSESRCPITSTPFTGTKRRGLGDGAGMTREVNIVLACPTGTFVSASTTTHSNLRT*PISSAVGVYVLXRXTSN 527 HSP 4 Score: 81.712 bits (172), Expect = 1.05382e-100 Query: 3 WHNRQLYLYFHCKPRLSFSYIDQHNRVCPAQEQK 104 HSP 5 Score: 292.488 bits (632), Expect = 1.90358e-96 Query: 103 LKXVALKHIHQQLMILVMFLSSNVL**RLTQKYPWGMPTLY*LLVSFQLRRLVHVV*YQ*ME*M*LDI*IPMAVFHPQELSLCSLTTFCLMCMPQVNYTVTAPLGLFLGLIADKIC*EK*LATVQILFVFRRFKVITMRSF 525 HSP 6 Score: 78.5046 bits (165), Expect = 1.90358e-96 Query: 2 FCS*AGQTRLCWSI*EKDKRGLQWKYKYN*RLCH 103 HSP 7 Score: 174.728 bits (375), Expect = 6.23243e-90 Query: 94 RSKKTPHSDHFEPPEDKQYLHGSQLFLLTNFVCDKAKKEPKRGSNCIVHLWHTHQTKCCKRAQ*KFLRMKDGHR 315 HSP 8 Score: 117.911 bits (251), Expect = 6.23243e-90 Query: 386 NDTRS*YSVGMPHGYFCVSLYYNTFELKNMTNIISCWCICFKATXFK 526 HSP 9 Score: 75.7553 bits (159), Expect = 6.23243e-90 Query: 2 VAQPSIVFVFPL*TSFVFLLYRPT*PCLSSSGAK 103 HSP 10 Score: 166.022 bits (356), Expect = 3.42775e-84 Query: 98 AKKLLIVITLNLLKTNNICTVANYFS*QILSAIRPRKSPRGAVTV*FTCGIHIRQNVVREHSESS*G*KTAIGI*MSNH 334 HSP 11 Score: 110.579 bits (235), Expect = 3.42775e-84 Query: 373 ATELE*HEKLI*CWHAPRVLLCQPLLQHIRT*EHDQYHQLLVYMF*XDXLQ 525 HSP 12 Score: 72.5479 bits (152), Expect = 3.42775e-84 Query: 1 CGTTVNCICISTVNLVCLSLI*TNITVFVQLRSKK 105 HSP 13 Score: 135.322 bits (289), Expect = 4.37774e-68 Query: 144 KWSRCDWTSRFRWPSFILRNFHCALLQHFV*CVCHK*TIQXXXXXXXXXXLSQTKFVKRNSWLPCRYC 347 HSP 14 Score: 96.3747 bits (204), Expect = 4.37774e-68 Query: 396 I*SXSX*NIYTNS**YWSCS*VRMCCSRG*HKSTRGACQHYINF 527 HSP 15 Score: 63.3837 bits (132), Expect = 4.37774e-68 Query: 3 WTNTVMLVYIRERQTRFTVEIQIQLTVVP 89 | ||||
CCall_contig6670_v2 | 7.10655e-39 | 83.58% | ||
CCall_contig6670_v2 | ||||
HSP 1 Score: 137.613 bits (294), Expect = 7.10655e-39 Query: 783 PTTHSIISLERSTTCQYQLCFSFKNAIKGSVSERYRDQASNPDLLNKGLTAPIECRTLCSSSDLLVP 983 HSP 2 Score: 40.9315 bits (83), Expect = 7.10655e-39 Query: 714 IRVQVPTTXXXLXSXTXLQLCISPTTHSI 800 HSP 3 Score: 114.703 bits (244), Expect = 7.17209e-36 Query: 798 RPGRYEKI*TTA*CAAFNWCSQTLI*QIWIRCLISISFTN*ALYCIFKTKT*LVLARGRTFQAYY 992 HSP 4 Score: 53.7613 bits (111), Expect = 7.17209e-36 Query: 623 SKLIIEWVVGEMHNCRXVXEXSXXXVVGTCTRMXXXXXXXXXVGTCTHMVVXXXAQVEEVMCT 811 HSP 5 Score: 116.078 bits (247), Expect = 2.73446e-35 Query: 782 GTRRSELLHSVRHSIGAVRPLFNKSGFDA*SRYLSLTEPFIAFLKLKHNWYWHVVERSKLIIEWVVG 982 HSP 6 Score: 45.9718 bits (94), Expect = 2.73446e-35 Query: 751 LLSGWWGRCITVDRWXR 801 HSP 7 Score: 27.6434 bits (54), Expect = 2.73446e-35 Query: 623 TCTHMVVXXXAQVEEVMCT 679 HSP 8 Score: 23.0613 bits (44), Expect = 2.73446e-35 Query: 659 VXEXSXXXVVGTCTRMXXXXXXXXXVGTCTHMVV 760 HSP 9 Score: 112.412 bits (239), Expect = 1.84687e-32 Query: 787 VREDLNYCIVCGIQLVQSDPYLTNLDSMLDLDIFH*LSPLLHF*N*NIIGIGTWSNVPSLLLSGW 981 HSP 10 Score: 44.5971 bits (91), Expect = 1.84687e-32 Query: 623 VVGEMHNCRXVXEXSXXXVVGTCTRMXXXXXXXXXVGTCTHMVVXXXAQVEEVMCT 790 HSP 11 Score: 116.536 bits (248), Expect = 1.66283e-31 Query: 802 *AWNVRPRANTNYVLVLKMQ*RAQLVKDIEIKHRIQIC*IRV*LHQLNAAHYAVVQIFSYL 984 HSP 12 Score: 37.2658 bits (75), Expect = 1.66283e-31 Query: 752 LXHXSTVMHLPHHPLN 799 HSP 13 Score: 62.4673 bits (130), Expect = 5.08595e-18 Query: 788 HPLNNKLGTFDHVPIPIMF*F*KCNKGL 871 HSP 14 Score: 37.724 bits (76), Expect = 5.08595e-18 Query: 911 FVK*GSDCTN*MPHTMQ*FRS 973 HSP 15 Score: 25.3524 bits (49), Expect = 5.08595e-18 Query: 714 IRVQVPTTXXXLXSXTXLQLCISPT 788 | ||||
CCall_contig3850_v2 | 7.06963e-16 | 50.00% | ||
CCall_contig3850_v2 | ||||
HSP 1 Score: 77.5882 bits (163), Expect = 7.06963e-16 Query: 521 EXSXXXVVGTCTRMXXXXXXXXXVGTCTHMVVXXXAQVEEVMCTXXXXXXXXXXXXXHQRLNPHCLQQLQRPMX*PFE 754 HSP 2 Score: 23.5196 bits (45), Expect = 7.06963e-16 Query: 751 WWGRCITVDRWXR 789 HSP 3 Score: 46.43 bits (95), Expect = 4.38919e-15 Query: 623 VVGTCTRMXXXXXXXXXVGTCTHMVVXXXAQVEEVMCT 736 HSP 4 Score: 45.9718 bits (94), Expect = 4.38919e-15 Query: 520 TRD*THIAXNNYKGQCXNHLK 582 HSP 5 Score: 23.0613 bits (44), Expect = 4.38919e-15 Query: 760 GWWGRCITVDR 792 | ||||
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Blast Hits to C. Parasitica Protein
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_CparasiticaFilteredProteinModelsAAseqs)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
estExt_fgenesh1_pg.C_11688 | 1.09026e-15 | 41.49% | ||
Crypa1|105718|estExt_fgenesh1_pg.C_11688 | ||||
HSP 1 Score: 65.0846 bits (157), Expect = 1.09026e-15 Query: 107 IPAPSPSPRRLVPVNGVDVIGHLDSDGRLSSSGTFTVLSYNILSDVYATSELYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQSDHYEE 388 HSP 2 Score: 31.9574 bits (71), Expect = 1.09026e-15 Query: 4 VITMRSFFAPELDKHGYVGLY--KRKTNEVYSGNTNTIDGCA 123 | ||||
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Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_PopulusProt_JamboreeModels1_1)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
estExt_fgenesh4_pg.C_LG_XVI0485 | 3.98029e-70 | 76.19% | ||
jgi|Poptr1_1|825136|estExt_fgenesh4_pg.C_LG_XVI0485 | ||||
HSP 1 Score: 261.922 bits (668), Expect = 3.98029e-70 Query: 23 FEVXRXKTYTPTADDIGHVLKFECVVVEADTKVPVGHANTILTSRVIPAPSPSPRRLVPVNGVDVIGHLDSDGRLSSSGTFTVLSYNILSDVYATSELYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQSDHYEEFFCS*AGQTRLCWSI*EKDKRGLQWKYK 526 HSP 2 Score: 67.3958 bits (163), Expect = 1.43884e-11 Query: 1 FFAPELDKHGYVGLYKRKTNEVYSGNTNTIDGCAT 105 | ||||
estExt_fgenesh4_pg.C_LG_VI1102 | 4.40073e-69 | 75.60% | ||
jgi|Poptr1_1|819331|estExt_fgenesh4_pg.C_LG_VI1102 | ||||
HSP 1 Score: 258.455 bits (659), Expect = 4.40073e-69 Query: 23 FEVXRXKTYTPTADDIGHVLKFECVVVEADTKVPVGHANTILTSRVIPAPSPSPRRLVPVNGVDVIGHLDSDGRLSSSGTFTVLSYNILSDVYATSELYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQSDHYEEFFCS*AGQTRLCWSI*EKDKRGLQWKYK 526 HSP 2 Score: 71.2478 bits (173), Expect = 9.96426e-13 Query: 1 FFAPELDKHGYVGLYKRKTNEVYSGNTNTIDGCAT 105 | ||||
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Blast Hits to Contig V2 RO454
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_RO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
RO454_contig26951_v2 | 6.73217e-141 | 86.36% | ||
RO454_contig26951_v2 | ||||
HSP 1 Score: 496.391 bits (1077), Expect = 6.73217e-141 Query: 2 TCTRMXXXXXXXXXVGTCTHMVVXXXAQVEEVMCTXXXXXXXXXXXXXHQRLNPHCLQQLQRPMX*PFEVXRXKTYTPTADDIGHVLKFECVVVEADTKVPVGHANTILTSRVIPAPSPSPRRLVPVNGVDVIGHLDSDGRLSSSGTFTVLSYNILSDVYATSELYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQSDHYEEFFCS*AGQTRLCWSI*EKDKRGLQWKYKYN*RLCH 727 HSP 2 Score: 440.489 bits (955), Expect = 1.54267e-126 Query: 1 TRD*THIAXNNYKGQCXNHLKXVALKHIHQQLMILVMFLSSNVL**RLTQKYPWGMPTLY*LLVSFQLRRLVHVV*YQ*ME*M*LDI*IPMAVFHPQELSLCSLTTFCLMCMPQVNYTVTAPLGLFLGLIADKIC*EK*LATVQILFVFRRFKVITMRSFFAPELDKHGYVGLYKRKTNEVYSGNTNTIDGCAT 582 HSP 3 Score: 25.3524 bits (49), Expect = 1.54267e-126 Query: 751 GWWGRCITVDRWXR 792 HSP 4 Score: 23.9778 bits (46), Expect = 1.54267e-126 Query: 659 EXSXXXVVGTCTRMXXXXXXXXXVGTCTHMVV 754 HSP 5 Score: 438.198 bits (950), Expect = 2.22479e-123 Query: 3 WHNRQLYLYFHCKPRLSFSYIDQHNRVCPAQEQKNSS**SL*TS*RQTISAR*PTISLNKFCLR*GQERAQEGQ*LYSSLVAYTSDKML*ESTVKVPEDERRPSESRCPITSTPFTGTKRRGLGDGAGMTREVNIVLACPTGTFVSASTTTHSNLRT*PISSAVGVYVLXRXTSNGYXIGLCSCCKQCGF 572 HSP 6 Score: 265.912 bits (574), Expect = 1.95082e-112 Query: 1 CGTTVNCICISTVNLVCLSLI*TNITVFVQLRSKKTPHSDHFEPPEDKQYLHGSQLFLLTNFVCDKAKKEPKRGSNCIVHLWHTHQTKCCKRAQ*KFLRMKDGHR 315 HSP 7 Score: 157.316 bits (337), Expect = 1.95082e-112 Query: 386 NDTRS*YSVGMPHGYFCVSLYYNTFELKNMTNIISCWCICFKATXFKWLXHWPL*LLXAMWVQ 574 HSP 8 Score: 247.125 bits (533), Expect = 1.07152e-98 Query: 2 VAQPSIVFVFPL*TSFVFLLYRPT*PCLSSSGAKKLLIVITLNLLKTNNICTVANYFS*QILSAIRPRKSPRGAVTV*FTCGIHIRQNVVREHSESS*G*KTAIGI*MSNH 334 HSP 9 Score: 130.282 bits (278), Expect = 1.07152e-98 Query: 373 ATELE*HEKLI*CWHAPRVLLCQPLLQHIRT*EHDQYHQLLVYMF*XDXLQMVXALAF 546 HSP 10 Score: 150.443 bits (322), Expect = 3.85873e-81 Query: 144 KWSRCDWTSRFRWPSFILRNFHCALLQHFV*CVCHK*TIQXXXXXXXXXXLSQTKFVKRNSWLPCRYC 347 HSP 11 Score: 112.87 bits (240), Expect = 3.85873e-81 Query: 396 KANAITI*SXSX*NIYTNS**YWSCS*VRMCCSRG*HKSTRGACQHYINF 545 HSP 12 Score: 70.2568 bits (147), Expect = 3.85873e-81 Query: 3 WTNTVMLVYIRERQTRFTVEIQIQLTVVP 89 HSP 13 Score: 29.9345 bits (59), Expect = 3.85873e-81 Query: 626 TCTRMXXXXXXXXXVGTCTHMVVXXXAQVEEVMC 727 | ||||
RO454_contig26104_v2 | 1.92773e-66 | 96.10% | ||
RO454_contig26104_v2 | ||||
HSP 1 Score: 181.143 bits (389), Expect = 1.92773e-66 Query: 751 VREDLNYCIVCGIQLVQSDPYLTNLDSMLDLDIFH*LSPLLHF*N*NIIGIGTWSNVPSLLLSGWWGRCITVDRWXR 981 HSP 2 Score: 88.5852 bits (187), Expect = 1.92773e-66 Query: 521 VXEXSXXXVVGTCTRMXXXXXXXXXVGTCTHMVVXXXAQVEEVMCTXXXXXXXXXXXXXHQRLNPHCLQQLQRPMX*PFE 760 HSP 3 Score: 197.181 bits (424), Expect = 3.95035e-59 Query: 623 GTRRSELLHSVRHSIGAVRPLFNKSGFDA*SRYLSLTEPFIAFLKLKHNWYWHVVERSKLIIEWVVGEMHNCRXVXEXSXXXVVGTCTRMXXXXXXXXXVGTCTHMVVXXXAQVEEVMCT 982 HSP 4 Score: 51.0121 bits (105), Expect = 3.95035e-59 Query: 499 TRD*THIAXNNYKGQCXNHLKXVALKHI 582 HSP 5 Score: 182.976 bits (393), Expect = 6.33559e-54 Query: 714 IRVQVPTTXXXLXSXTXLQLCISPTTHSIISLERSTTCQYQLCFSFKNAIKGSVSERYRDQASNPDLLNKGLTAPIECRTLCSSSDLLVP 983 HSP 6 Score: 47.8046 bits (98), Expect = 6.33559e-54 Query: 522 SNGYXIGLCSCCKQCGF 572 HSP 7 Score: 142.196 bits (304), Expect = 1.98696e-40 Query: 792 RPGRYEKI*TTA*CAAFNWCSQTLI*QIWIRCLISISFTN*ALYCIFKTKT*LVLARGRTFQAYY*V 992 HSP 8 Score: 40.4733 bits (82), Expect = 1.98696e-40 Query: 623 VVGEMHNCRXVXEXSXXXVVGTCTRMXXXXXXXXXVGTCTHMVVXXXAQVEEVMCT 790 HSP 9 Score: 136.697 bits (292), Expect = 4.65102e-38 Query: 793 TQ**AWNVRPRANTNYVLVLKMQ*RAQLVKDIEIKHRIQIC*IRV*LHQLNAAHYAVVQIFSYL 984 HSP 10 Score: 40.9315 bits (83), Expect = 4.65102e-38 Query: 524 KWLXHWPL*LLXAMWVQ 574 HSP 11 Score: 97.2911 bits (206), Expect = 4.67773e-30 Query: 752 LXHXSTVMHLPHHPLNNKLGTFDHVPIPIMF*F*KCNKGL 871 HSP 12 Score: 50.5539 bits (104), Expect = 4.67773e-30 Query: 911 FVK*GSDCTN*MPHTMQ*FRSSRT 982 | ||||
RO454_contig15020_v2 | 3.13349e-47 | 79.17% | ||
RO454_contig15020_v2 | ||||
HSP 1 Score: 100.499 bits (213), Expect = 3.13349e-47 Query: 713 FLKLKHNWYWHVVERSKLIIEWVVGEMHNCRXVXEXSXXXVVGTCTRM 856 HSP 2 Score: 99.124 bits (210), Expect = 3.13349e-47 Query: 843 RPGRYEKI*TTA*CAAFNWCSQTLI*QIWIRCLISISFTN*ALYCIFKTK 992 HSP 3 Score: 30.8509 bits (61), Expect = 3.13349e-47 Query: 623 VVGTCTRMXXXXXXXXXVGTCTHMVVXXXAQVEEVMCT 736 HSP 4 Score: 92.709 bits (196), Expect = 1.3805e-40 Query: 853 VREDLNYCIVCGIQLVQSDPYLTNLDSMLDLDIFH*LSPLLHF 981 HSP 5 Score: 83.0867 bits (175), Expect = 1.3805e-40 Query: 745 PLLHF*N*NIIGIGTWSNVPSLLLSGWWGRCITVDRWXRXV 867 HSP 6 Score: 32.2255 bits (64), Expect = 1.3805e-40 Query: 659 RXVXEXSXXXVVGTCTRMXXXXXXXXXVGTCTHMVV 766 HSP 7 Score: 96.8329 bits (205), Expect = 3.70279e-40 Query: 837 LCFSFKNAIKGSVSERYRDQASNPDLLNKGLTAPIECRTLCSSSDLLVP 983 HSP 8 Score: 84.9195 bits (179), Expect = 3.70279e-40 Query: 720 VQVPTTXXXLXSXTXLQLCISPTTHSIISLERSTTCQYQLCFSFK 854 HSP 9 Score: 87.6687 bits (185), Expect = 3.05045e-35 Query: 853 KMQ*RAQLVKDIEIKHRIQIC*IRV*LHQLNAAHYAVVQIFSYL 984 HSP 10 Score: 77.5882 bits (163), Expect = 3.05045e-35 Query: 746 TXLXHXSTVMHLPHHPLNNKLGTFDHVPIPIMF*F*KCNKG 868 HSP 11 Score: 89.0434 bits (188), Expect = 1.96426e-28 Query: 857 GTRRSELLHSVRHSIGAVRPLFNKSGFDA*SRYLSLTEPFIA 982 HSP 12 Score: 45.9718 bits (94), Expect = 1.96426e-28 Query: 792 IFKTKT*LVLARGRTFQAYY*V 857 HSP 13 Score: 31.7673 bits (63), Expect = 1.96426e-28 Query: 659 VXEXSXXXVVGTCTRMXXXXXXXXXVGTCTHMVV 760 HSP 14 Score: 50.5539 bits (104), Expect = 1.37358e-14 Query: 911 FVK*GSDCTN*MPHTMQ*FRSSRT 982 HSP 15 Score: 45.0554 bits (92), Expect = 1.37358e-14 Query: 793 TQ**AWNVRPRANTNYVLVL 852 | ||||
RO454_contig15019_v2 | 1.17683e-23 | 100.00% | ||
RO454_contig15019_v2 | ||||
HSP 1 Score: 87.2105 bits (184), Expect = 1.17683e-23 Query: 788 YLSLTEPFIAFLKLKHNWYWHVVERSKLIIEWV 886 HSP 2 Score: 39.0986 bits (79), Expect = 1.17683e-23 Query: 659 VVGTCTRMXXXXXXXXXVGTCTHMVV 736 HSP 3 Score: 78.0464 bits (164), Expect = 5.21804e-17 Query: 781 DIFH*LSPLLHF*N*NIIGIGTWSNVPSLLLSGWWG 888 HSP 4 Score: 25.8106 bits (50), Expect = 5.21804e-17 Query: 713 RXVXEXSXXXVVGTCTRM 766 HSP 5 Score: 81.2538 bits (171), Expect = 6.28457e-16 Query: 789 THSIISLERSTTCQYQLCFSFKNAIKGSVSERY 887 HSP 6 Score: 72.5479 bits (152), Expect = 2.18901e-15 Query: 792 ISFTN*ALYCIFKTKT*LVLARGRTFQAYY*V 887 HSP 7 Score: 25.8106 bits (50), Expect = 2.18901e-15 Query: 623 GTCTHMVVXXXAQVEEVMCT 682 HSP 8 Score: 75.2971 bits (158), Expect = 3.90323e-14 Query: 782 PHHPLNNKLGTFDHVPIPIMF*F*KCNKGL 871 HSP 9 Score: 72.0897 bits (151), Expect = 3.6055e-13 Query: 793 TQ**AWNVRPRANTNYVLVLKMQ*RAQLVKDI 888 | ||||
RO454_contig10549_v2 | 2.5623e-19 | 51.28% | ||
RO454_contig10549_v2 | ||||
HSP 1 Score: 80.7956 bits (170), Expect = 2.5623e-19 Query: 521 EXSXXXVVGTCTRMXXXXXXXXXVGTCTHMVVXXXAQVEEVMCTXXXXXXXXXXXXXHQRLNPHCLQQLQRPMX*PFE 754 HSP 2 Score: 30.8509 bits (61), Expect = 2.5623e-19 Query: 751 GWWGRCITVDRWXR 792 HSP 3 Score: 48.721 bits (100), Expect = 1.16354e-13 Query: 520 TRD*THIAXNNYKGQCXNHLK 582 HSP 4 Score: 42.7643 bits (87), Expect = 1.16354e-13 Query: 623 VVGTCTRMXXXXXXXXXVGTCTHMVVXXXAQVEEVMCT 736 HSP 5 Score: 23.0613 bits (44), Expect = 1.16354e-13 Query: 757 WWGRCITVDRW 789 | ||||
RO454_contig25298_v2 | 7.97539e-15 | 91.43% | ||
RO454_contig25298_v2 | ||||
HSP 1 Score: 77.5882 bits (163), Expect = 7.97539e-15 Query: 877 VREDLNYCIVCGIQLVQSDPYLTNLDSMLDLDIFH 981 HSP 2 Score: 75.7553 bits (159), Expect = 2.84112e-14 Query: 876 RPGRYEKI*TTA*CAAFNWCSQTLI*QIWIRCLISISFT 992 HSP 3 Score: 72.0897 bits (151), Expect = 3.59349e-13 Query: 877 VKDIEIKHRIQIC*IRV*LHQLNAAHYAVVQIFSYL 984 HSP 4 Score: 72.0897 bits (151), Expect = 3.59349e-13 Query: 885 YRDQASNPDLLNKGLTAPIECRTLCSSSDLLVP 983 HSP 5 Score: 70.2568 bits (147), Expect = 1.28441e-12 Query: 764 LKHNWYWHVVERSKLIIEWVVGEMHNCR 847 HSP 6 Score: 66.1329 bits (138), Expect = 2.23931e-11 Query: 884 GTRRSELLHSVRHSIGAVRPLFNKSGFDA*SRY 982 HSP 7 Score: 64.7583 bits (135), Expect = 5.80655e-11 Query: 773 MHLPHHPLNNKLGTFDHVPIPIMF* 847 HSP 8 Score: 64.3001 bits (134), Expect = 7.97724e-11 Query: 772 *NIIGIGTWSNVPSLLLSGWWGRCI 846 | ||||
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Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_TAIR7_pep_20070425)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
AT3G58580.1 | 1.30504e-62 | 70.06% | ||
hydrolase | chr3:21671843-21674674 REVERSE | ||||
HSP 1 Score: 236.884 bits (603), Expect = 1.30504e-62 Query: 23 EVXRXKTYTPTADDIGHVLKFECVVVEADTKVPVGHANTILTSRVIPAPSPSPRRLVPVNGVDVIGHLDSDGRLSSSGTFTVLSYNILSDVYATSELYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQSDHYEEFFCS*AGQTRLCWSI*EKDKRGLQWKYK 523 | ||||
AT3G58560.1 | 3.55397e-60 | 69.46% | ||
endonuclease/exonuclease/phosphatase family protein | chr3:21661857-21664873 REVERSE | ||||
HSP 1 Score: 228.794 bits (582), Expect = 3.55397e-60 Query: 23 EVXRXKTYTPTADDIGHVLKFECVVVEADTKVPVGHANTILTSRVIPAPSPSPRRLVPVNGVDVIGHLDSDGRLSSSGTFTVLSYNILSDVYATSELYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQSDHYEEFFCS*AGQTRLCWSI*EKDKRGLQWKYK 523 HSP 2 Score: 69.3218 bits (168), Expect = 3.60377e-12 Query: 1 FFAPELDKHGYVGLYKRKTNEVYSGNTNTIDGCAT 105 | ||||
AT1G31500.3 | 9.3984e-12 | 36.04% | ||
endonuclease/exonuclease/phosphatase family protein | chr1:11274211-11276515 REVERSE | ||||
HSP 1 Score: 60.4622 bits (145), Expect = 9.3984e-12 Query: 101 NTILTSRVI-------PAPSPSPRRLVPVNGVDVIGHLDSDGRLSSSGTFTVLSYNILSDVYATSELYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQSDHYEEFF 412 HSP 2 Score: 24.6386 bits (52), Expect = 9.3984e-12 Query: 4 SFFAPELDKHGYVGLYKRKTNEVYSGNTNTIDGCA 108 | ||||
AT1G31500.1 | 1.20894e-11 | 37.89% | ||
endonuclease/exonuclease/phosphatase family protein | chr1:11273802-11276515 REVERSE | ||||
HSP 1 Score: 60.077 bits (144), Expect = 1.20894e-11 Query: 101 PAPSPSPRRLVPVNGVDVIGHLDSDGRLSSSGTFTVLSYNILSDVYATSELYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQSDHYEEFF 385 HSP 2 Score: 24.6386 bits (52), Expect = 1.20894e-11 Query: 4 SFFAPELDKHGYVGLYKRKTNEVYSGNTNTIDGCA 108 | ||||
AT1G31500.2 | 1.21165e-11 | 37.89% | ||
endonuclease/exonuclease/phosphatase family protein | chr1:11273802-11276128 REVERSE | ||||
HSP 1 Score: 60.077 bits (144), Expect = 1.21165e-11 Query: 101 PAPSPSPRRLVPVNGVDVIGHLDSDGRLSSSGTFTVLSYNILSDVYATSELYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQSDHYEEFF 385 HSP 2 Score: 24.6386 bits (52), Expect = 1.21165e-11 Query: 4 SFFAPELDKHGYVGLYKRKTNEVYSGNTNTIDGCA 108 | ||||
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Blast Hits to Contigs V2 WO454
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_WO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
WO454_contig10609_v2 | 1.79638e-84 | 96.27% | ||
WO454_contig10609_v2 | ||||
HSP 1 Score: 308.525 bits (667), Expect = 1.79638e-84 Query: 122 EVXRXKTYTPTADDIGHVLKFECVVVEADTKVPVGHANTILTSRVIPAPSPSPRRLVPVNGVDVIGHLDSDGRLSSSGTFTVLSYNILSDVYATSELYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQS 523 HSP 2 Score: 290.655 bits (628), Expect = 4.30373e-79 Query: 121 LKXVALKHIHQQLMILVMFLSSNVL**RLTQKYPWGMPTLY*LLVSFQLRRLVHVV*YQ*ME*M*LDI*IPMAVFHPQELSLCSLTTFCLMCMPQVNYTVTAPLGLFLGLIADKIC*EK*LATVQILFVFRRFKV 525 HSP 3 Score: 288.364 bits (623), Expect = 2.11331e-78 Query: 120 SL*TS*RQTISAR*PTISLNKFCLR*GQERAQEGQ*LYSSLVAYTSDKML*ESTVKVPEDERRPSESRCPITSTPFTGTKRRGLGDGAGMTREVNIVLACPTGTFVSASTTTHSNLRT*PISSAVGVYVLXRXTS 524 HSP 4 Score: 171.521 bits (368), Expect = 1.33536e-72 Query: 121 HFEPPEDKQYLHGSQLFLLTNFVCDKAKKEPKRGSNCIVHLWHTHQTKCCKRAQ*KFLRMKDGHR 315 HSP 5 Score: 118.369 bits (252), Expect = 1.33536e-72 Query: 373 ATELE*HEKLI*CWHAPRVLLCQPLLQHIRT*EHDQYHQLLVYMF*XDXLQ 525 HSP 6 Score: 157.316 bits (337), Expect = 1.58553e-67 Query: 122 TLNLLKTNNICTVANYFS*QILSAIRPRKSPRGAVTV*FTCGIHIRQNVVREHSESS*G*KTAIGI*MSNH 334 HSP 7 Score: 115.619 bits (246), Expect = 1.58553e-67 Query: 386 NDTRS*YSVGMPHGYFCVSLYYNTFELKNMTNIISCWCICFKATXF 523 HSP 8 Score: 150.443 bits (322), Expect = 2.91092e-60 Query: 144 KWSRCDWTSRFRWPSFILRNFHCALLQHFV*CVCHK*TIQXXXXXXXXXXLSQTKFVKRNSWLPCRYC 347 HSP 9 Score: 98.2075 bits (208), Expect = 2.91092e-60 Query: 396 *SXSX*NIYTNS**YWSCS*VRMCCSRG*HKSTRGACQHYINF 524 | ||||
WO454_contig3958_v2 | 3.51663e-49 | 92.21% | ||
WO454_contig3958_v2 | ||||
HSP 1 Score: 172.896 bits (371), Expect = 3.51663e-49 Query: 751 VREDLNYCIVCGIQLVQSDPYLTNLDSMLDLDIFH*LSPLLHF*N*NIIGIGTWSNVPSLLLSGWWGRCITVDRWXR 981 HSP 2 Score: 43.2225 bits (88), Expect = 3.51663e-49 Query: 626 VXEXSXXXVVGTCTRMXXXXXXXXXVGTCTHMVVXXXAQVEEVMC 760 HSP 3 Score: 185.267 bits (398), Expect = 2.29207e-47 Query: 623 GTRRSELLHSVRHSIGAVRPLFNKSGFDA*SRYLSLTEPFIAFLKLKHNWYWHVVERSKLIIEWVVGEMHNCRXVXEXSXXXVVGTCTRMXXXXXXXXXVGTCTHMVVXXXAQVEEVMCT 982 HSP 4 Score: 169.23 bits (363), Expect = 1.54147e-42 Query: 720 VQVPTTXXXLXSXTXLQLCISPTTHSIISLERSTTCQYQLCFSFKNAIKGSVSERYRDQASNPDLLNKGLTAPIECRTLCSSSDLLVP 983 HSP 5 Score: 135.781 bits (290), Expect = 1.13207e-39 Query: 792 RPGRYEKI*TTA*CAAFNWCSQTLI*QIWIRCLISISFTN*ALYCIFKTKT*LVLARGRTFQAYY*V 992 HSP 6 Score: 42.3061 bits (86), Expect = 1.13207e-39 Query: 659 VVGEMHNCRXVXEXSXXXVVGTCTRMXXXXXXXXXVGTCTHMVV 790 HSP 7 Score: 27.6434 bits (54), Expect = 1.13207e-39 Query: 623 TCTHMVVXXXAQVEEVMCT 679 HSP 8 Score: 133.49 bits (285), Expect = 4.7267e-33 Query: 793 TQ**AWNVRPRANTNYVLVLKMQ*RAQLVKDIEIKHRIQIC*IRV*LHQLNAAHYAVVQIFSYL 984 HSP 9 Score: 23.9778 bits (46), Expect = 4.7267e-33 Query: 714 IRVQVPTTXXXLXSXTXLQLCISPT 788 HSP 10 Score: 89.9598 bits (190), Expect = 1.82199e-27 Query: 752 LXHXSTVMHLPHHPLNNKLGTFDHVPIPIMF*F*KCNKGL 871 HSP 11 Score: 48.721 bits (100), Expect = 1.82199e-27 Query: 911 FVK*GSDCTN*MPHTMQ*FRSSRT 982 | ||||
WO454_contig15357_v2 | 1.34223e-39 | 86.96% | ||
WO454_contig15357_v2 | ||||
HSP 1 Score: 149.527 bits (320), Expect = 1.34223e-39 Query: 713 FNKSGFDA*SRYLSLTEPFIAFLKLKHNWYWHVVERSKLIIEWVVGEMHNCRXVXEXSXXXVVGTCTRM 919 HSP 2 Score: 29.9345 bits (59), Expect = 1.34223e-39 Query: 623 VVGTCTRMXXXXXXXXXVGTCTHMVVXXXAQVEEVMCT 736 HSP 3 Score: 129.824 bits (277), Expect = 2.07081e-34 Query: 745 LTNLDSMLDLDIFH*LSPLLHF*N*NIIGIGTWSNVPSLLLSGWWGRCITVDRWXRXV 918 HSP 4 Score: 32.2255 bits (64), Expect = 2.07081e-34 Query: 659 VXEXSXXXVVGTCTRMXXXXXXXXXVGTCTHMVV 760 HSP 5 Score: 138.988 bits (297), Expect = 1.95711e-33 Query: 720 VQVPTTXXXLXSXTXLQLCISPTTHSIISLERSTTCQYQLCFSFKNAIKGSVSERYRDQASNPDLLN 920 HSP 6 Score: 93.6255 bits (198), Expect = 3.31242e-21 Query: 792 I*QIWIRCLISISFTN*ALYCIFKTKT*LVLARGRTFQAYY*V 920 HSP 7 Score: 23.9778 bits (46), Expect = 3.31242e-21 Query: 659 GTCTHMVV 682 HSP 8 Score: 93.1672 bits (197), Expect = 1.21637e-19 Query: 793 TQ**AWNVRPRANTNYVLVLKMQ*RAQLVKDIEIKHRIQIC* 918 HSP 9 Score: 91.7926 bits (194), Expect = 3.15405e-19 Query: 746 TXLXHXSTVMHLPHHPLNNKLGTFDHVPIPIMF*F*KCNKGL 871 | ||||
WO454_contig10876_v2 | 2.2958e-19 | 54.88% | ||
WO454_contig10876_v2 | ||||
HSP 1 Score: 92.2508 bits (195), Expect = 2.2958e-19 Query: 521 RXVXEXSXXXVVGTCTRMXXXXXXXXXVGTCTHMVVXXXAQVEEVMCTXXXXXXXXXXXXXHQRLNPHCLQQLQRPMX*PFE 766 | ||||
WO454_contig18062_v2 | 3.79662e-12 | 63.83% | ||
WO454_contig18062_v2 | ||||
HSP 1 Score: 64.7583 bits (135), Expect = 3.79662e-12 Query: 521 VXXXAQVEEVMCTXXXXXXXXXXXXXHQRLNPHCLQQLQRPMX*PFE 661 HSP 2 Score: 22.1449 bits (42), Expect = 3.79662e-12 Query: 751 LSGWWGRCITVDRWXR 798 | ||||
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