Oall_contig36870_v2

NameOall_contig36870_v2
AccessionID7142600
Sequence
GCGAGCCTGTCACGTTTTAATGCCACCCTNCTATGCAGTAGTTCAGATCT
TCTCGTACCTACTACTTCTCTAGTGGCCATGTTACACATTATGCTCTTAT
TATATTCTGGCTTGGGAGGNTTCCAAGAGAGAAAAAGCTGGANTNGGAAN
TGGGGATTCGAAACGTAACTAGGAGTTGGATGTGCGAGCCTGTCAACGTT
TATGTTACTCTTATTATAGTTCTGGCTTGGGAGGCTTCCAAGTAGAGAAA
Length250
Typecontig
Organism Oak

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References

Dababase Accession
GFF_source SeqManPro

ESTs in this contig

Type Feature Position
EST ROB_115690_3193_1182 0-236
EST WOB_147324_1853_0434 19-250

InterProScan Analysis

Analysis Date: 11-20-2009 (Interpro: Oall_contigs_v2)
SEQUENCE: Oall_contig36870_v2_1_ORF1 CRC64: 15CD08949F3A1309 LENGTH: 55 aa
No hits reported.
SEQUENCE: Oall_contig36870_v2_3_ORF2 CRC64: F008319B0205098C LENGTH: 67 aa
No hits reported.
SEQUENCE: Oall_contig36870_v2_6_ORF1 CRC64: AF3910161F1F0B0F LENGTH: 83 aa
No hits reported.
SEQUENCE: Oall_contig36870_v2_1_ORF1 CRC64: 15CD08949F3A1309 LENGTH: 55 aa
No hits reported.
SEQUENCE: Oall_contig36870_v2_3_ORF2 CRC64: F008319B0205098C LENGTH: 67 aa
No hits reported.
SEQUENCE: Oall_contig36870_v2_6_ORF1 CRC64: AF3910161F1F0B0F LENGTH: 83 aa
No hits reported.

Blast Hits to Contigs V2 AC454

Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_AC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
AC454_contig17422_v22.25864e-2578.26%
AC454_contig17422_v2
HSP 1 
Score: 88.5852 bits (187), Expect = 2.25864e-25
Identity = 36/46 (78.26%), Postives = 37/46 (80.43%), Query Frame = 2
Query:   11 HVLMPPXYAVVQIFSYLLLL*WPCYTLCSYYILAWEXSKREKAGXG 148
            H L    +AVVQI  YLLLL*WPCYTLCSYYILAWE SKREKAG G
Sbjct:  831 HQLNATHFAVVQILLYLLLL*WPCYTLCSYYILAWEASKREKAGLG 968

HSP 2 
Score: 40.9315 bits (83), Expect = 2.25864e-25
Identity = 14/18 (77.78%), Postives = 16/18 (88.89%), Query Frame = 3
Query:  153 GIRNVTRSWMCEPVNVYV 206
            G+ NVTRSWMCEPVNV +
Sbjct:  960 GLGNVTRSWMCEPVNVLI 1013

HSP 3 
Score: 86.2941 bits (182), Expect = 1.32179e-23
Identity = 35/38 (92.11%), Postives = 35/38 (92.11%), Query Frame = -3
Query:   36 FXXQLFLSWKPPKPEYNKSIMCNMATREVVGTRRSELL 149
            F  QLFLSWKPPKPEYNKSIMCNMATREVVGT RSELL
Sbjct:  856 FLVQLFLSWKPPKPEYNKSIMCNMATREVVGTIRSELL 969

HSP 4 
Score: 37.2658 bits (75), Expect = 1.32179e-23
Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = -3
Query:  159 NVDRLAHPTPSYVS 200
            NVDRLAHPTPSYVS
Sbjct:  966 NVDRLAHPTPSYVS 1007

HSP 5 
Score: 86.2941 bits (182), Expect = 1.61415e-22
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 1
Query:   34 CSSSDLLVPTTSLVAMLHIMLLLYSGLGGFQERKSW 141
            CSSSDL+VPTTSLVAMLHIMLLLYSGLGGFQERKSW
Sbjct:  854 CSSSDLIVPTTSLVAMLHIMLLLYSGLGGFQERKSW 961

HSP 6 
Score: 33.6001 bits (67), Expect = 1.61415e-22
Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = 1
Query:  160 ET*LGVGCASLSTF 201
            ET*LGVGCASLSTF
Sbjct:  967 ET*LGVGCASLSTF 1008

HSP 7 
Score: 75.7553 bits (159), Expect = 2.13068e-19
Identity = 35/38 (92.11%), Postives = 35/38 (92.11%), Query Frame = -2
Query:   34 PXPAFSLLEXSQARI**EHNV*HGH*RSSRYEKI*TTA 147
            P PAFSLLE SQARI**EHNV*HGH*RSSRY KI*TTA
Sbjct:  854 PSPAFSLLEASQARI**EHNV*HGH*RSSRYNKI*TTA 967

HSP 8 
Score: 33.6001 bits (67), Expect = 2.13068e-19
Identity = 14/16 (87.50%), Postives = 14/16 (87.50%), Query Frame = -1
Query:  152 TLTGSHIQLLVTFRIP 199
            TLTGSHIQLLVTF  P
Sbjct:  959 TLTGSHIQLLVTFPSP 1006

HSP 9 
Score: 67.0494 bits (140), Expect = 7.03911e-16
Identity = 29/34 (85.29%), Postives = 30/34 (88.24%), Query Frame = -1
Query:   26 LGXLPSQNIIRA*CVTWPLEK**VREDLNYCIXG 127
            LG LPSQNIIRA*CVTWPLEK**V+ DLNYC  G
Sbjct:  846 LGSLPSQNIIRA*CVTWPLEK**VQ*DLNYCKMG 947

HSP 10 
Score: 30.3927 bits (60), Expect = 7.03911e-16
Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = -2
Query:  160 KR*QARTSNS*LRF 201
            KR*QARTSNS*LRF
Sbjct:  967 KR*QARTSNS*LRF 1008

HSP 11 
Score: 56.0524 bits (116), Expect = 3.51771e-13
Identity = 21/22 (95.45%), Postives = 21/22 (95.45%), Query Frame = 3
Query:   75 GHVTHYALIIFWLGRXPREKKL 140
            GHVTHYALIIFWLGR PREKKL
Sbjct:  895 GHVTHYALIIFWLGRLPREKKL 960

HSP 12 
Score: 32.2255 bits (64), Expect = 3.51771e-13
Identity = 13/13 (100.00%), Postives = 13/13 (100.00%), Query Frame = 2
Query:  161 KRN*ELDVRACQR 199
            KRN*ELDVRACQR
Sbjct:  968 KRN*ELDVRACQR 1006

Blast Hits to Contigs V2 CC454

Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_CC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
CC454_contig19675_v24.0653e-2578.26%
CC454_contig19675_v2
HSP 1 
Score: 88.5852 bits (187), Expect = 4.0653e-25
Identity = 36/46 (78.26%), Postives = 37/46 (80.43%), Query Frame = 2
Query:   11 HVLMPPXYAVVQIFSYLLLL*WPCYTLCSYYILAWEXSKREKAGXG 148
            H L    +AVVQI  YLLLL*WPCYTLCSYYILAWE SKREKAG G
Sbjct: 1646 HQLNATHFAVVQILLYLLLL*WPCYTLCSYYILAWEASKREKAGLG 1783

HSP 2 
Score: 40.9315 bits (83), Expect = 4.0653e-25
Identity = 14/18 (77.78%), Postives = 16/18 (88.89%), Query Frame = 3
Query:  153 GIRNVTRSWMCEPVNVYV 206
            G+ NVTRSWMCEPVNV +
Sbjct: 1775 GLGNVTRSWMCEPVNVLI 1828

HSP 3 
Score: 86.2941 bits (182), Expect = 2.37807e-23
Identity = 35/38 (92.11%), Postives = 35/38 (92.11%), Query Frame = -3
Query:   36 FXXQLFLSWKPPKPEYNKSIMCNMATREVVGTRRSELL 149
            F  QLFLSWKPPKPEYNKSIMCNMATREVVGT RSELL
Sbjct: 1671 FLVQLFLSWKPPKPEYNKSIMCNMATREVVGTIRSELL 1784

HSP 4 
Score: 37.2658 bits (75), Expect = 2.37807e-23
Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = -3
Query:  159 NVDRLAHPTPSYVS 200
            NVDRLAHPTPSYVS
Sbjct: 1781 NVDRLAHPTPSYVS 1822

HSP 5 
Score: 86.2941 bits (182), Expect = 2.90321e-22
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 1
Query:   34 CSSSDLLVPTTSLVAMLHIMLLLYSGLGGFQERKSW 141
            CSSSDL+VPTTSLVAMLHIMLLLYSGLGGFQERKSW
Sbjct: 1669 CSSSDLIVPTTSLVAMLHIMLLLYSGLGGFQERKSW 1776

HSP 6 
Score: 33.6001 bits (67), Expect = 2.90321e-22
Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = 1
Query:  160 ET*LGVGCASLSTF 201
            ET*LGVGCASLSTF
Sbjct: 1782 ET*LGVGCASLSTF 1823

HSP 7 
Score: 75.7553 bits (159), Expect = 3.82852e-19
Identity = 35/38 (92.11%), Postives = 35/38 (92.11%), Query Frame = -2
Query:   34 PXPAFSLLEXSQARI**EHNV*HGH*RSSRYEKI*TTA 147
            P PAFSLLE SQARI**EHNV*HGH*RSSRY KI*TTA
Sbjct: 1669 PSPAFSLLEASQARI**EHNV*HGH*RSSRYNKI*TTA 1782

HSP 8 
Score: 33.6001 bits (67), Expect = 3.82852e-19
Identity = 14/16 (87.50%), Postives = 14/16 (87.50%), Query Frame = -1
Query:  152 TLTGSHIQLLVTFRIP 199
            TLTGSHIQLLVTF  P
Sbjct: 1774 TLTGSHIQLLVTFPSP 1821

HSP 9 
Score: 67.0494 bits (140), Expect = 1.26299e-15
Identity = 29/34 (85.29%), Postives = 30/34 (88.24%), Query Frame = -1
Query:   26 LGXLPSQNIIRA*CVTWPLEK**VREDLNYCIXG 127
            LG LPSQNIIRA*CVTWPLEK**V+ DLNYC  G
Sbjct: 1661 LGSLPSQNIIRA*CVTWPLEK**VQ*DLNYCKMG 1762

HSP 10 
Score: 30.3927 bits (60), Expect = 1.26299e-15
Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = -2
Query:  160 KR*QARTSNS*LRF 201
            KR*QARTSNS*LRF
Sbjct: 1782 KR*QARTSNS*LRF 1823

HSP 11 
Score: 56.0524 bits (116), Expect = 6.3022e-13
Identity = 21/22 (95.45%), Postives = 21/22 (95.45%), Query Frame = 3
Query:   75 GHVTHYALIIFWLGRXPREKKL 140
            GHVTHYALIIFWLGR PREKKL
Sbjct: 1710 GHVTHYALIIFWLGRLPREKKL 1775

HSP 12 
Score: 32.2255 bits (64), Expect = 6.3022e-13
Identity = 13/13 (100.00%), Postives = 13/13 (100.00%), Query Frame = 2
Query:  161 KRN*ELDVRACQR 199
            KRN*ELDVRACQR
Sbjct: 1783 KRN*ELDVRACQR 1821

Blast Hits to Contigs V2 CCall

Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_CCall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
CCall_contig6670_v24.20256e-2578.26%
CCall_contig6670_v2
HSP 1 
Score: 88.5852 bits (187), Expect = 4.20256e-25
Identity = 36/46 (78.26%), Postives = 37/46 (80.43%), Query Frame = 2
Query:   11 HVLMPPXYAVVQIFSYLLLL*WPCYTLCSYYILAWEXSKREKAGXG 148
            H L    +AVVQI  YLLLL*WPCYTLCSYYILAWE SKREKAG G
Sbjct:  234 HQLNATHFAVVQILLYLLLL*WPCYTLCSYYILAWEASKREKAGLG 371

HSP 2 
Score: 40.9315 bits (83), Expect = 4.20256e-25
Identity = 14/18 (77.78%), Postives = 16/18 (88.89%), Query Frame = 3
Query:  153 GIRNVTRSWMCEPVNVYV 206
            G+ NVTRSWMCEPVNV +
Sbjct:  189 GLGNVTRSWMCEPVNVLI 242

HSP 3 
Score: 86.2941 bits (182), Expect = 2.45779e-23
Identity = 35/38 (92.11%), Postives = 35/38 (92.11%), Query Frame = -3
Query:   36 FXXQLFLSWKPPKPEYNKSIMCNMATREVVGTRRSELL 149
            F  QLFLSWKPPKPEYNKSIMCNMATREVVGT RSELL
Sbjct:  233 FLVQLFLSWKPPKPEYNKSIMCNMATREVVGTIRSELL 346

HSP 4 
Score: 37.2658 bits (75), Expect = 2.45779e-23
Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = -3
Query:  159 NVDRLAHPTPSYVS 200
            NVDRLAHPTPSYVS
Sbjct:  195 NVDRLAHPTPSYVS 236

HSP 5 
Score: 86.2941 bits (182), Expect = 3.00008e-22
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 1
Query:   34 CSSSDLLVPTTSLVAMLHIMLLLYSGLGGFQERKSW 141
            CSSSDL+VPTTSLVAMLHIMLLLYSGLGGFQERKSW
Sbjct:  241 CSSSDLIVPTTSLVAMLHIMLLLYSGLGGFQERKSW 348

HSP 6 
Score: 33.6001 bits (67), Expect = 3.00008e-22
Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = 1
Query:  160 ET*LGVGCASLSTF 201
            ET*LGVGCASLSTF
Sbjct:  194 ET*LGVGCASLSTF 235

HSP 7 
Score: 75.7553 bits (159), Expect = 3.95416e-19
Identity = 35/38 (92.11%), Postives = 35/38 (92.11%), Query Frame = -2
Query:   34 PXPAFSLLEXSQARI**EHNV*HGH*RSSRYEKI*TTA 147
            P PAFSLLE SQARI**EHNV*HGH*RSSRY KI*TTA
Sbjct:  235 PSPAFSLLEASQARI**EHNV*HGH*RSSRYNKI*TTA 348

HSP 8 
Score: 33.6001 bits (67), Expect = 3.95416e-19
Identity = 14/16 (87.50%), Postives = 14/16 (87.50%), Query Frame = -1
Query:  152 TLTGSHIQLLVTFRIP 199
            TLTGSHIQLLVTF  P
Sbjct:  196 TLTGSHIQLLVTFPSP 243

HSP 9 
Score: 67.0494 bits (140), Expect = 1.30341e-15
Identity = 29/34 (85.29%), Postives = 30/34 (88.24%), Query Frame = -1
Query:   26 LGXLPSQNIIRA*CVTWPLEK**VREDLNYCIXG 127
            LG LPSQNIIRA*CVTWPLEK**V+ DLNYC  G
Sbjct:  255 LGSLPSQNIIRA*CVTWPLEK**VQ*DLNYCKMG 356

HSP 10 
Score: 30.3927 bits (60), Expect = 1.30341e-15
Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = -2
Query:  160 KR*QARTSNS*LRF 201
            KR*QARTSNS*LRF
Sbjct:  194 KR*QARTSNS*LRF 235

HSP 11 
Score: 56.0524 bits (116), Expect = 6.49859e-13
Identity = 21/22 (95.45%), Postives = 21/22 (95.45%), Query Frame = 3
Query:   75 GHVTHYALIIFWLGRXPREKKL 140
            GHVTHYALIIFWLGR PREKKL
Sbjct:  242 GHVTHYALIIFWLGRLPREKKL 307

HSP 12 
Score: 32.2255 bits (64), Expect = 6.49859e-13
Identity = 13/13 (100.00%), Postives = 13/13 (100.00%), Query Frame = 2
Query:  161 KRN*ELDVRACQR 199
            KRN*ELDVRACQR
Sbjct:  196 KRN*ELDVRACQR 234

Blast Hits to Contig V2 RO454

Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_RO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
RO454_contig15020_v21.46577e-3388.89%
RO454_contig15020_v2
HSP 1 
Score: 137.155 bits (293), Expect = 1.46577e-33
Identity = 56/63 (88.89%), Postives = 56/63 (88.89%), Query Frame = -3
Query:   30 YNKSNINVDRLAHPTPSYVSNPXFXXQLFLSWKPPKPEYNKSIMCNMATREVVGTRRSELLHR 218
            Y K   NVDRLAHPTPSYVSNP F  QLFLSWKPPKPEYNKSIMCNMATREVVGTRRSELLHR
Sbjct: 1070 YFKKY*NVDRLAHPTPSYVSNPQFLVQLFLSWKPPKPEYNKSIMCNMATREVVGTRRSELLHR 1258

HSP 2 
Score: 132.115 bits (282), Expect = 4.82332e-32
Identity = 55/63 (87.30%), Postives = 55/63 (87.30%), Query Frame = 2
Query:   11 HVLMPPXYAVVQIFSYLLLL*WPCYTLCSYYILAWEXSKREKAGXGXGDSKRN*ELDVRACQR 199
            H L    YAVVQIFSYLLLL*WPCYTLCSYYILAWE SKREKAG G GDSKRN*ELDVRACQR
Sbjct: 1051 HQLNATLYAVVQIFSYLLLL*WPCYTLCSYYILAWEVSKREKAGLGTGDSKRN*ELDVRACQR 1239

HSP 3 
Score: 128.908 bits (275), Expect = 4.45541e-31
Identity = 54/57 (94.74%), Postives = 54/57 (94.74%), Query Frame = 1
Query:   31 LCSSSDLLVPTTSLVAMLHIMLLLYSGLGGFQERKSWXXXWGFET*LGVGCASLSTF 201
            LCSSSDLLVPTTSLVAMLHIMLLLYSGLGGFQERKSW   WGFET*LGVGCASLSTF
Sbjct: 1071 LCSSSDLLVPTTSLVAMLHIMLLLYSGLGGFQERKSWTRNWGFET*LGVGCASLSTF 1241

HSP 4 
Score: 112.87 bits (240), Expect = 2.99637e-26
Identity = 54/57 (94.74%), Postives = 54/57 (94.74%), Query Frame = -2
Query:   31 KR*QARTSNS*LRFESPXPXPAFSLLEXSQARI**EHNV*HGH*RSSRYEKI*TTA* 201
            KR*QARTSNS*LRFESP P PAFSLLE SQARI**EHNV*HGH*RSSRYEKI*TTA*
Sbjct: 1071 KR*QARTSNS*LRFESPVPSPAFSLLETSQARI**EHNV*HGH*RSSRYEKI*TTA* 1241

HSP 5 
Score: 108.288 bits (230), Expect = 7.17697e-25
Identity = 51/74 (68.92%), Postives = 55/74 (74.32%), Query Frame = -1
Query:   26 LYLEASQARTIIRVT*TLTGSHIQLLVTFRIPXXXXXXXSLGXLPSQNIIRA*CVTWPLEK**VREDLNYCIXG 247
            +Y +      I++   TLTGSHIQLLVTFRIP       SLG LPSQNIIRA*CVTWPLEK**VREDLNYCI G
Sbjct: 1066 IYYQI*SPYDILKNIKTLTGSHIQLLVTFRIPSS*SSFFSLGNLPSQNIIRA*CVTWPLEK**VREDLNYCIEG 1287

HSP 6 
Score: 98.2075 bits (208), Expect = 7.77142e-22
Identity = 41/60 (68.33%), Postives = 42/60 (70.00%), Query Frame = 3
Query:   27 PXMQXXXXXXXXXXXXGHVTHYALIIFWLGRXPREKKLXXEXGIRNVTRSWMCEPVNVYV 206
            P MQ            GHVTHYALIIFWLGR PREKKL  E GIRNVTRSWMCEPVNV +
Sbjct: 1067 PSMQ*FRSSRTYYFSSGHVTHYALIIFWLGRFPREKKLD*ELGIRNVTRSWMCEPVNVLI 1246

RO454_contig25298_v27.17697e-2581.48%
RO454_contig25298_v2
HSP 1 
Score: 108.288 bits (230), Expect = 7.17697e-25
Identity = 44/54 (81.48%), Postives = 44/54 (81.48%), Query Frame = -3
Query:   30 RLAHPTPSYVSNPXFXXQLFLSWKPPKPEYNKSIMCNMATREVVGTRRSELLHR 191
            RLAHPTPSYVSNP F  QLFL WKPPKPEYNK      ATREVVGTRRSELLHR
Sbjct:  168 RLAHPTPSYVSNPHFPLQLFLPWKPPKPEYNKXXXXXXATREVVGTRRSELLHR 329

HSP 2 
Score: 106.914 bits (227), Expect = 1.86099e-24
Identity = 45/53 (84.91%), Postives = 45/53 (84.91%), Query Frame = 1
Query:   31 LCSSSDLLVPTTSLVAMLHIMLLLYSGLGGFQERKSWXXXWGFET*LGVGCAS 189
            LCSSSDLLVPTTSLVA  H  LLLYSGLGGFQ RKSW   WGFET*LGVGCAS
Sbjct:  169 LCSSSDLLVPTTSLVAXXHXXLLLYSGLGGFQGRKSWSGKWGFET*LGVGCAS 327

HSP 3 
Score: 102.79 bits (218), Expect = 3.24455e-23
Identity = 46/60 (76.67%), Postives = 46/60 (76.67%), Query Frame = 2
Query:   11 HVLMPPXYAVVQIFSYLLLL*WPCYTLCSYYILAWEXSKREKAGXGXGDSKRN*ELDVRA 190
            H L    YAVVQIFSYLLLL*WP  T   YYILAWE SK EKAG G GDSKRN*ELDVRA
Sbjct:  149 HQLNSTLYAVVQIFSYLLLL*WPXXTXXXYYILAWEASKGEKAGVGSGDSKRN*ELDVRA 328

HSP 4 
Score: 85.8359 bits (181), Expect = 4.11843e-18
Identity = 40/55 (72.73%), Postives = 40/55 (72.73%), Query Frame = -1
Query:   26 GSHIQLLVTFRIPXXXXXXXSLGXLPSQNIIRA*CVTWPLEK**VREDLNYCIXG 190
            GSHIQLLVTFRIP       SLG LPSQNII      WPLEK**VREDLNYCI G
Sbjct:  164 GSHIQLLVTFRIPTSHSSFFSLGSLPSQNIIXXXXXXWPLEK**VREDLNYCIEG 328

HSP 5 
Score: 85.8359 bits (181), Expect = 4.11843e-18
Identity = 44/53 (83.02%), Postives = 44/53 (83.02%), Query Frame = -2
Query:   31 ARTSNS*LRFESPXPXPAFSLLEXSQARI**EHNV*HGH*RSSRYEKI*TTA* 189
            ARTSNS*LRFESP P PAFS LE SQARI**   V  GH*RSSRYEKI*TTA*
Sbjct:  169 ARTSNS*LRFESPLPTPAFSPLEASQARI**XXXVXXGH*RSSRYEKI*TTA* 327

HSP 6 
Score: 74.8389 bits (157), Expect = 8.41706e-15
Identity = 32/55 (58.18%), Postives = 32/55 (58.18%), Query Frame = 3
Query:   27 PXMQXXXXXXXXXXXXGHVTHYALIIFWLGRXPREKKLXXEXGIRNVTRSWMCEP 191
            P MQ            GH      IIFWLGR PREKKL  E GIRNVTRSWMCEP
Sbjct:  165 PSMQ*FRSSRTYYFSSGHXXXXXXIIFWLGRLPREKKLEWEVGIRNVTRSWMCEP 329

RO454_contig15877_v28.41511e-1979.55%
RO454_contig15877_v2
HSP 1 
Score: 88.127 bits (186), Expect = 8.41511e-19
Identity = 35/44 (79.55%), Postives = 36/44 (81.82%), Query Frame = -3
Query:   87 YNKSNINVDRLAHPTPSYVSNPXFXXQLFLSWKPPKPEYNKSIM 218
            Y K   NVDRLAHPTPSYVSNP F  QLFLSWKPPKPEYNK I+
Sbjct:   21 YFKKY*NVDRLAHPTPSYVSNPQFLVQLFLSWKPPKPEYNKRII 152

HSP 2 
Score: 83.0867 bits (175), Expect = 2.70757e-17
Identity = 33/38 (86.84%), Postives = 35/38 (92.11%), Query Frame = 1
Query:   88 IMLLLYSGLGGFQERKSWXXXWGFET*LGVGCASLSTF 201
            ++LLLYSGLGGFQERKSW   WGFET*LGVGCASLSTF
Sbjct:   38 MILLLYSGLGGFQERKSWTRNWGFET*LGVGCASLSTF 151

HSP 3 
Score: 78.5046 bits (165), Expect = 6.48522e-16
Identity = 31/37 (83.78%), Postives = 32/37 (86.49%), Query Frame = 3
Query:   96 LIIFWLGRXPREKKLXXEXGIRNVTRSWMCEPVNVYV 206
            LIIFWLGR PREKKL  E GIRNVTRSWMCEPVNV +
Sbjct:   33 LIIFWLGRFPREKKLD*ELGIRNVTRSWMCEPVNVLI 143

HSP 4 
Score: 77.5882 bits (163), Expect = 1.22403e-15
Identity = 32/35 (91.43%), Postives = 32/35 (91.43%), Query Frame = 2
Query:   95 SYYILAWEXSKREKAGXGXGDSKRN*ELDVRACQR 199
            SYYILAWE SKREKAG G GDSKRN*ELDVRACQR
Sbjct:   40 SYYILAWEVSKREKAGLGTGDSKRN*ELDVRACQR 144

HSP 5 
Score: 69.7986 bits (146), Expect = 2.76975e-13
Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = -2
Query:   85 KR*QARTSNS*LRFESPXPXPAFSLLEXSQARI**EHNV 201
            KR*QARTSNS*LRFESP P PAFSLLE SQARI**E ++
Sbjct:   38 KR*QARTSNS*LRFESPVPSPAFSLLETSQARI**EDHI 154

RO454_contig26104_v21.58829e-18100.00%
RO454_contig26104_v2
HSP 1 
Score: 87.2105 bits (184), Expect = 1.58829e-18
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = -3
Query:   30 LSWKPPKPEYNKSIMCNMATREVVGTRRSELLHR 131
            LSWKPPKPEYNKSIMCNMATREVVGTRRSELLHR
Sbjct:  691 LSWKPPKPEYNKSIMCNMATREVVGTRRSELLHR 792

HSP 2 
Score: 84.4613 bits (178), Expect = 1.06791e-17
Identity = 34/40 (85.00%), Postives = 34/40 (85.00%), Query Frame = 2
Query:   11 HVLMPPXYAVVQIFSYLLLL*WPCYTLCSYYILAWEXSKR 130
            H L    YAVVQIFSYLLLL*WPCYTLCSYYILAWE SKR
Sbjct:  672 HQLNATLYAVVQIFSYLLLL*WPCYTLCSYYILAWEVSKR 791

HSP 3 
Score: 77.5882 bits (163), Expect = 1.25185e-15
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 1
Query:   31 LCSSSDLLVPTTSLVAMLHIMLLLYSGLGGFQE 129
            LCSSSDLLVPTTSLVAMLHIMLLLYSGLGGFQE
Sbjct:  692 LCSSSDLLVPTTSLVAMLHIMLLLYSGLGGFQE 790

HSP 4 
Score: 76.2135 bits (160), Expect = 3.24606e-15
Identity = 32/34 (94.12%), Postives = 32/34 (94.12%), Query Frame = -1
Query:   26 LGXLPSQNIIRA*CVTWPLEK**VREDLNYCIXG 127
            LG LPSQNIIRA*CVTWPLEK**VREDLNYCI G
Sbjct:  687 LGNLPSQNIIRA*CVTWPLEK**VREDLNYCIEG 788

HSP 5 
Score: 66.1329 bits (138), Expect = 3.51493e-12
Identity = 32/33 (96.97%), Postives = 32/33 (96.97%), Query Frame = -2
Query:   31 LLEXSQARI**EHNV*HGH*RSSRYEKI*TTA* 129
            LLE SQARI**EHNV*HGH*RSSRYEKI*TTA*
Sbjct:  692 LLETSQARI**EHNV*HGH*RSSRYEKI*TTA* 790

Blast Hits to Contigs V2 WO454

Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_WO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
WO454_contig3958_v22.89866e-3396.49%
WO454_contig3958_v2
HSP 1 
Score: 135.781 bits (290), Expect = 2.89866e-33
Identity = 55/57 (96.49%), Postives = 55/57 (96.49%), Query Frame = -3
Query:   30 NVDRLAHPTPSYVSNPXFXXQLFLSWKPPKPEYNKSIMCNMATREVVGTRRSELLHR 200
            NVDRLAHPTPSYVSNP FX QLFLSWKPPKPEYNKSIMCNMATREVVGTRRSELLHR
Sbjct:  186 NVDRLAHPTPSYVSNPHFXLQLFLSWKPPKPEYNKSIMCNMATREVVGTRRSELLHR 356

HSP 2 
Score: 132.115 bits (282), Expect = 3.67852e-32
Identity = 55/63 (87.30%), Postives = 55/63 (87.30%), Query Frame = 2
Query:   11 HVLMPPXYAVVQIFSYLLLL*WPCYTLCSYYILAWEXSKREKAGXGXGDSKRN*ELDVRACQR 199
            H L    YAVVQIFSYLLLL*WPCYTLCSYYILAWE SKREKAG G GDSKRN*ELDVRACQR
Sbjct:  187 HQLNSTLYAVVQIFSYLLLL*WPCYTLCSYYILAWEASKREKAGVGSGDSKRN*ELDVRACQR 375

HSP 3 
Score: 128.908 bits (275), Expect = 3.39794e-31
Identity = 55/57 (96.49%), Postives = 55/57 (96.49%), Query Frame = 1
Query:   31 LCSSSDLLVPTTSLVAMLHIMLLLYSGLGGFQERKSWXXXWGFET*LGVGCASLSTF 201
            LCSSSDLLVPTTSLVAMLHIMLLLYSGLGGFQERKSW X WGFET*LGVGCASLSTF
Sbjct:  185 LCSSSDLLVPTTSLVAMLHIMLLLYSGLGGFQERKSWSXKWGFET*LGVGCASLSTF 355

HSP 4 
Score: 112.87 bits (240), Expect = 2.28519e-26
Identity = 54/57 (94.74%), Postives = 54/57 (94.74%), Query Frame = -2
Query:   31 KR*QARTSNS*LRFESPXPXPAFSLLEXSQARI**EHNV*HGH*RSSRYEKI*TTA* 201
            KR*QARTSNS*LRFESP P PAFSLLE SQARI**EHNV*HGH*RSSRYEKI*TTA*
Sbjct:  185 KR*QARTSNS*LRFESPLPTPAFSLLEASQARI**EHNV*HGH*RSSRYEKI*TTA* 355

HSP 5 
Score: 109.205 bits (232), Expect = 2.90001e-25
Identity = 50/58 (86.21%), Postives = 50/58 (86.21%), Query Frame = -1
Query:   26 TLTGSHIQLLVTFRIPXXXXXXXSLGXLPSQNIIRA*CVTWPLEK**VREDLNYCIXG 199
            TLTGSHIQLLVTFRIP  X    SLG LPSQNIIRA*CVTWPLEK**VREDLNYCI G
Sbjct:  187 TLTGSHIQLLVTFRIPTSXSSFFSLGSLPSQNIIRA*CVTWPLEK**VREDLNYCIEG 360

HSP 6 
Score: 99.5822 bits (211), Expect = 2.28573e-22
Identity = 42/60 (70.00%), Postives = 43/60 (71.67%), Query Frame = 3
Query:   27 PXMQXXXXXXXXXXXXGHVTHYALIIFWLGRXPREKKLXXEXGIRNVTRSWMCEPVNVYV 206
            P MQ            GHVTHYALIIFWLGR PREKKL XE GIRNVTRSWMCEPVNV +
Sbjct:  180 PSMQ*FRSSRTYYFSSGHVTHYALIIFWLGRLPREKKLEXEVGIRNVTRSWMCEPVNVLI 359

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