Oall_contig9807_v2
| Name | Oall_contig9807_v2 |
|---|---|
| Accession | ID6874517 |
| Sequence | CTTCTGGAACTACATAGGATCTTAAAAATGACATCAAATCCTCACGAGGA |
| Length | 303 |
| Type | contig |
| Organism | Oak |
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References
| Dababase | Accession |
|---|---|
| GFF_source | SeqManPro |
ESTs in this contig
| Type | Feature | Position |
|---|---|---|
| EST | ROB_116021_3559_2991 | 0-260 |
| EST | ROA_131682_2428_0493 | 43-303 |
InterProScan Analysis
Analysis Date: 11-20-2009
(Interpro: Oall_contigs_v2)
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Blast Hits to Uniprot
Analysis Date: 11-17-2009 (Blast: Oall_v2_uniprot)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
B9SIQ0_RICCO | 1.77367e-19 | 62.82% | ||
Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0825020 PE=4 SV=1 | ||||
HSP 1 Score: 98.5969 bits (244), Expect = 1.77367e-19 Query: 2 SAENRRSSLGLVEEEYVNSSLRLICSEEIDGRRWNYVAEKDALSGTFNKASIRXLTLNTPQPPREDLMSFLRSYVVPE 235 | ||||
A7QCD7_VITVI | 1.07605e-16 | 52.38% | ||
Chromosome undetermined scaffold_77, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035355001 PE=4 SV=1 | ||||
HSP 1 Score: 89.3521 bits (220), Expect = 1.07605e-16 Query: 2 AXSLVXSAENRRSSLGLVEEEYVNSSLRLICSEEIDGRRWNYVAEKDALSGTFNKASIRXLTLNTPQPPREDLMSFLRSYVVPE 253 | ||||
A5AUK4_VITVI | 1.07605e-16 | 52.38% | ||
Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003254 PE=4 SV=1 | ||||
HSP 1 Score: 89.3521 bits (220), Expect = 1.07605e-16 Query: 2 AXSLVXSAENRRSSLGLVEEEYVNSSLRLICSEEIDGRRWNYVAEKDALSGTFNKASIRXLTLNTPQPPREDLMSFLRSYVVPE 253 | ||||
Q93YU2_ARATH | 1.11354e-13 | 57.58% | ||
Putative uncharacterized protein At5g49820 OS=Arabidopsis thaliana GN=At5g49820 PE=2 SV=1 | ||||
HSP 1 Score: 79.337 bits (194), Expect = 1.11354e-13 Query: 2 EEEYVNSSLRLICSEEIDGRRWNYVAEKDALSGTFNKASIRXLTLNTPQPPREDLMSFLRSYVVPE 199 | ||||
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Blast Hits to Contigs V2 AB454
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_AB454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
AB454_contig6053_v2 | 9.82988e-31 | 96.88% | ||
AB454_contig6053_v2 | ||||
HSP 1 Score: 76.6717 bits (161), Expect = 9.82988e-31 Query: 116 LGLVEEEYVNSSLRLICSEEIDGRRWNYVAEK 211 HSP 2 Score: 67.5076 bits (141), Expect = 9.82988e-31 Query: 2 KDALSGTFNKASIRXLTLNTPQPPREDLMSFLRSYVVPE 118 HSP 3 Score: 65.2165 bits (136), Expect = 1.23769e-21 Query: 116 FFCHVVPSATVDFLGANQPQARIHILFLHQ 205 HSP 4 Score: 48.2628 bits (99), Expect = 1.23769e-21 Query: 2 FWNYIGS*K*HQILTRRLRSVQSEXANGGFVEGSRECVF 118 HSP 5 Score: 51.4703 bits (106), Expect = 6.21313e-16 Query: 115 KSM*IRA*G*FAPRKSTVADGTTWQKK 195 HSP 6 Score: 42.7643 bits (87), Expect = 6.21313e-16 Query: 1 KKTHSLEPSTKPPFAXSXXXXXXXLVRI*CHF*DPM*FQK 120 HSP 7 Score: 67.0494 bits (140), Expect = 5.95803e-13 Query: 87 ALLKVPESASFSAT*FHLRPSISSEQINLKLEFTYSSSTRP 209 | ||||
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Blast Hits to Contigs V2 ABall
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_ABall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
ABall_contig6146_v2 | 1.00157e-30 | 96.88% | ||
ABall_contig6146_v2 | ||||
HSP 1 Score: 76.6717 bits (161), Expect = 1.00157e-30 Query: 116 LGLVEEEYVNSSLRLICSEEIDGRRWNYVAEK 211 HSP 2 Score: 67.5076 bits (141), Expect = 1.00157e-30 Query: 2 KDALSGTFNKASIRXLTLNTPQPPREDLMSFLRSYVVPE 118 HSP 3 Score: 65.2165 bits (136), Expect = 1.26109e-21 Query: 116 FFCHVVPSATVDFLGANQPQARIHILFLHQ 205 HSP 4 Score: 48.2628 bits (99), Expect = 1.26109e-21 Query: 2 FWNYIGS*K*HQILTRRLRSVQSEXANGGFVEGSRECVF 118 HSP 5 Score: 51.4703 bits (106), Expect = 6.33061e-16 Query: 115 KSM*IRA*G*FAPRKSTVADGTTWQKK 195 HSP 6 Score: 42.7643 bits (87), Expect = 6.33061e-16 Query: 1 KKTHSLEPSTKPPFAXSXXXXXXXLVRI*CHF*DPM*FQK 120 HSP 7 Score: 67.0494 bits (140), Expect = 6.07068e-13 Query: 87 ALLKVPESASFSAT*FHLRPSISSEQINLKLEFTYSSSTRP 209 | ||||
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Blast Hits to MedicagoProt
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_MedicagoProt_20080227)
Best 10 Hits Shown
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Best 10 Hits Shown
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| Match Name | E value | Identity | ||
|---|---|---|---|---|
IMGA|AC144806_8.4 Protein of unknown function DUF647 chr04_p | 9.64286e-17 | 65.00% | ||
eudomolecule_IMGAG_V2 20685580-20692547 E EGN_Mt071002 20080227 | ||||
HSP 1 Score: 81.2629 bits (199), Expect = 9.64286e-17 Query: 2 SSLRLICSEEIDGRRWNYVAEKDALSGTFNKASIRXLTLNTPQPPREDLMSFLRSYVVPE 181 | ||||
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Blast Hits to Contig V2 RO454
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_RO454_contigs_v2)
Best 10 Hits Shown
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Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
RO454_contig6459_v2 | 1.6776e-59 | 100.00% | ||
RO454_contig6459_v2 | ||||
HSP 1 Score: 223.757 bits (482), Expect = 1.6776e-59 Query: 2 ESRFF*SKFNRARDTTAXSLVXSAENRRSSLGLVEEEYVNSSLRLICSEEIDGRRWNYVAEKDALSGTFNKASIRXLTLNTPQPPREDLMSFLRSYVVPE 301 HSP 2 Score: 206.803 bits (445), Expect = 2.16435e-54 Query: 2 FWNYIGS*K*HQILTRRLRSVQSEXANGGFVEGSRECVFFCHVVPSATVDFLGANQPQARIHILFLHQT*TRPPILRRXN*RXXXXXXXXXEFGLEEARF 301 HSP 3 Score: 179.31 bits (385), Expect = 4.08695e-46 Query: 3 SGTT*DLKNDIKSSXXXXXXXXXXXXMEALLKVPESASFSAT*FHLRPSISSEQINLKLEFTYSSSTRPRLDLRFSAXSTKEXAVVSLALLNLD*KKRDS 302 HSP 4 Score: 96.3747 bits (204), Expect = 4.79545e-33 Query: 1 LLELHRILKMTSNPHXXXXXXXXXXXXWRLC*RFQRVRLFLPRSSICDRRFPR 159 HSP 5 Score: 57.427 bits (119), Expect = 4.79545e-33 Query: 238 QLKXRRWCLWLC*IWIRRSEIR 303 HSP 6 Score: 123.867 bits (264), Expect = 1.96976e-29 Query: 1 KSM*IRA*G*FAPRKSTVADGTTWQKKTHSLEPSTKPPFAXSXXXXXXXLVRI*CHF*DPM*FQK 195 HSP 7 Score: 85.8359 bits (181), Expect = 7.56219e-23 Query: 84 CEFELEVDLLRGNRRSQMELRGRKRRTLWNLQQSL 188 HSP 8 Score: 33.6001 bits (67), Expect = 7.56219e-23 Query: 3 GFDVIFKILCSSR 41 | ||||
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Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_TAIR7_pep_20070425)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
AT5G49820.1 | 4.71742e-16 | 57.58% | ||
EMB1879 (EMBRYO DEFECTIVE 1879) | chr5:20263979-20266658 REVERSE | ||||
HSP 1 Score: 79.337 bits (194), Expect = 4.71742e-16 Query: 2 EEEYVNSSLRLICSEEIDGRRWNYVAEKDALSGTFNKASIRXLTLNTPQPPREDLMSFLRSYVVPE 199 | ||||
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Blast Hits to Contigs V2 WO454
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_WO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
WO454_contig6803_v2 | 3.6344e-24 | 84.62% | ||
WO454_contig6803_v2 | ||||
HSP 1 Score: 105.997 bits (225), Expect = 3.6344e-24 Query: 2 EEIDGRRWNYVAEKDALSGTFNKASIRXLTLNTPQPPREDLMSFLRSYVVPE 157 HSP 2 Score: 84.4613 bits (178), Expect = 1.08744e-17 Query: 2 FWNYIGS*K*HQILTRRLRSVQSEXANGGFVEGSRECVFFCHVVPSATVDFL 157 HSP 3 Score: 72.5479 bits (152), Expect = 4.26238e-14 Query: 1 RKSTVADGTTWQKKTHSLEPSTKPPFAXSXXXXXXXLVRI*CHF*DPM*FQK 156 HSP 4 Score: 72.0897 bits (151), Expect = 5.76286e-14 Query: 3 SGTT*DLKNDIKSSXXXXXXXXXXXXMEALLKVPESASFSAT*FHLRPSIS 155 HSP 5 Score: 65.6747 bits (137), Expect = 4.91724e-12 Query: 1 LLELHRILKMTSNPHXXXXXXXXXXXXWRLC*RFQRVRLFLPRSSICDRRFP 156 | ||||
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