Oall_contig1191_v2
| Name | Oall_contig1191_v2 |
|---|---|
| Accession | ID6738370 |
| Sequence | CAACGAAGGAACGCTCTCTCNTCCTCTCTCTCTCTCTCTCTCTCACAAAC |
| Length | 1199 |
| Type | contig |
| Organism | Oak |
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References
| Dababase | Accession |
|---|---|
| GFF_source | SeqManPro |
ESTs in this contig
| Type | Feature | Position | ||
|---|---|---|---|---|
| EST | ROB_111935_3851_2295 | 0-273 | ||
| EST | ROB_081671_3773_3506 | 1-273 | ||
| EST | ROB_074051_3435_2878 | 13-273 | ||
| EST | ROB_129054_1602_1206 | 18-287 | ||
| microsatellite | Oall_contig1191_v2-ssr24 | 23 | 43 | 0 |
| EST | ROA_151913_2845_3340 | 57-332 | ||
| microsatellite | Oall_contig1191_v2-ssr60 | 59 | 69 | 0 |
| EST | WOA_061187_1596_2316 | 116-396 | ||
| EST | WOA_005094_1196_3150 | 123-396 | ||
| microsatellite | Oall_contig1191_v2-ssr182 | 181 | 193 | 0 |
| EST | ROB_123712_1574_2519 | 217-475 | ||
| point_mutation | Oall_contig1191_v2-snp220 | 219 | 221 | 0 |
| point_mutation | Oall_contig1191_v2-snp274 | 273 | 275 | 0 |
| EST | ROA_090513_2721_3211 | 327-583 | ||
| EST | ROB_045082_3411_2030 | 459-726 | ||
| EST | WOA_060372_0741_0980 | 652-897 | ||
| EST | ROA_041277_2283_1057 | 670-924 | ||
| EST | ROA_056955_2832_3645 | 687-932 | ||
| EST | WOA_083943_0633_1654 | 693-949 | ||
| EST | ROA_100537_0215_0549 | 730-892 | ||
| EST | ROA_068668_0456_2546 | 730-892 | ||
| EST | WOA_069109_0531_0930 | 743-1,002 | ||
| EST | WOB_147760_1231_0889 | 775-1,035 | ||
| EST | ROB_129113_3463_3649 | 781-1,048 | ||
| EST | ROB_075788_1659_1373 | 789-1,045 | ||
| EST | ROB_059329_1656_0714 | 817-1,076 | ||
| point_mutation | Oall_contig1191_v2-snp819 | 818 | 820 | 0 |
| EST | WOB_117656_1652_2260 | 843-1,074 | ||
| EST | ROA_031408_2284_1366 | 858-1,131 | ||
| EST | WOA_053348_0324_3305 | 881-1,133 | ||
| EST | WOA_069862_0096_1398 | 1,021-1,199 |
GO terms assigned to this feature
| Accession | Category | Term |
|---|---|---|
| GO:0006367 | biological_process | transcription initiation from RNA polymerase II promoter |
| GO:0005622 | cellular_component | intracellular |
| GO:0005488 | molecular_function | binding |
| GO:0003677 | molecular_function | DNA binding |
| GO:0003702 | molecular_function | RNA polymerase II transcription factor activity |
| GO:0008270 | molecular_function | zinc ion binding |
KEGG Analysis
| Analysis Date: 11-25-2009
(KEGG: Oall_v2) K03120 TBP, tbp; transcription initiation factor TFIID TATA-box-binding protein |
InterProScan Analysis
Analysis Date: 11-20-2009
(Interpro: Oall_contigs_v2)
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Blast Hits to Uniprot
Analysis Date: 11-17-2009 (Blast: Oall_v2_uniprot)
Best 10 Hits Shown | Show Best 25 Hits | Show All Hits
Note: Click a description for more details.
Best 10 Hits Shown | Show Best 25 Hits | Show All Hits
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
Q9SAU1_PHAVU | 1.17559e-105 | 97.50% | ||
TATA-box binding protein OS=Phaseolus vulgaris GN=PVTBP2 PE=2 SV=1 | ||||
HSP 1 Score: 387.497 bits (994), Expect = 1.17559e-105 Query: 301 MAEQALEGSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ 900 | ||||
TBP_SOYBN | 1.17559e-105 | 97.50% | ||
TATA-box-binding protein OS=Glycine max GN=TBP1 PE=2 SV=1 | ||||
HSP 1 Score: 387.497 bits (994), Expect = 1.17559e-105 Query: 301 MAEQALEGSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ 900 | ||||
TBP_SOLTU | 1.17559e-105 | 97.50% | ||
TATA-box-binding protein OS=Solanum tuberosum GN=TBP PE=2 SV=1 | ||||
HSP 1 Score: 387.497 bits (994), Expect = 1.17559e-105 Query: 301 MAEQALEGSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ 900 | ||||
A7P0B8_VITVI | 2.61894e-105 | 97.00% | ||
Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024845001 PE=4 SV=1 | ||||
HSP 1 Score: 386.341 bits (991), Expect = 2.61894e-105 Query: 301 MAEQALEGSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ 900 | ||||
TBP_MESCR | 4.46724e-105 | 98.00% | ||
TATA-box-binding protein OS=Mesembryanthemum crystallinum PE=2 SV=1 | ||||
HSP 1 Score: 385.571 bits (989), Expect = 4.46724e-105 Query: 301 MAEQALEGSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ 900 | ||||
Q9ZTX5_PHAVU | 5.8344e-105 | 97.00% | ||
TATA-box binding protein OS=Phaseolus vulgaris GN=PVTBP1 PE=2 SV=1 | ||||
HSP 1 Score: 385.185 bits (988), Expect = 5.8344e-105 Query: 301 MAEQALEGSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ 900 | ||||
C0PRB0_PICSI | 5.8344e-105 | 97.50% | ||
Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 | ||||
HSP 1 Score: 385.185 bits (988), Expect = 5.8344e-105 Query: 301 MAEQALEGSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ 900 | ||||
B7FMY1_MEDTR | 9.95197e-105 | 97.00% | ||
Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 | ||||
HSP 1 Score: 384.415 bits (986), Expect = 9.95197e-105 Query: 301 MAEQALEGSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ 900 | ||||
C5YSH9_SORBI | 1.69755e-104 | 97.50% | ||
Putative uncharacterized protein Sb08g022273 OS=Sorghum bicolor GN=Sb08g022273 PE=4 SV=1 | ||||
HSP 1 Score: 383.645 bits (984), Expect = 1.69755e-104 Query: 301 MAEQALEGSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ 900 | ||||
C5WQG2_SORBI | 1.69755e-104 | 97.50% | ||
Putative uncharacterized protein Sb01g012880 OS=Sorghum bicolor GN=Sb01g012880 PE=4 SV=1 | ||||
HSP 1 Score: 383.645 bits (984), Expect = 1.69755e-104 Query: 301 MAEQALEGSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ 900 | ||||
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Blast Hits to Contigs V2 AC454
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_AC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
AC454_contig25402_v2 | 4.94695e-109 | 96.02% | ||
AC454_contig25402_v2 | ||||
HSP 1 Score: 388.254 bits (841), Expect = 4.94695e-109 Query: 199 I*FF*F*XFRSSNPSTDNIKLKRE*XKNL*EKKGMAEQALEGSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 726 HSP 2 Score: 23.9778 bits (46), Expect = 4.94695e-109 Query: 816 YRS*GER*DLYS 851 HSP 3 Score: 364.427 bits (789), Expect = 1.29973e-101 Query: 230 HQTLAQTTSN*RESKRRIYKKRKEWQNRHWKGANQLISRSTLLGLSLPFRTLCLQ*IWTANWILRPLHFKLVMQNTIPSVLLL*L*G*GNQKPQP*XLLLGRWFVLELRVNNSXSWQHGSMLELYRSLVFPLNSRILRFRT*LVHVMLNSPSGLKDWHIPMVPFLV 727 HSP 4 Score: 23.0613 bits (44), Expect = 1.29973e-101 Query: 814 LTGAKVRDETYT 849 HSP 5 Score: 342.433 bits (741), Expect = 1.90971e-94 Query: 240 *HRQHQIKERVXEEFIRKERNGRTGIGREPTS*SQEAPFWDCPYPSEHCVYSKFGLQIGS*GHCTXXXXCRIQSQAFCCCNYEDKGTKNHSLDXCFWEDGLYWS*EXXXXXXGSTEVCSNYTEAWFSR*IQGF*DSEHSWFM*C*IPHQA*RTGIFPWCLF* 725 HSP 6 Score: 301.194 bits (651), Expect = 1.16056e-82 Query: 316 TRKGTMGICQSFKPDGEFNIT*TNYVLNLKILEFSGKTKLLYNSSILPCCQXXXXXXXXXXTNHLPRSKXQGCGFWFPYPHNYSSKTLGIVFCITSLKCNGLKIQFAVQIYCRHNVLKGRDNPRRVLLEINWLAPFQ 726 HSP 7 Score: 23.0613 bits (44), Expect = 1.16056e-82 Query: 824 LYRSHLSP* 850 HSP 8 Score: 211.843 bits (456), Expect = 3.17018e-82 Query: 453 LEKAPWEYASPSSLMGNLTSHEPTMF*ILKSLNLAGKPSFCIIRAYFRAANFDCCSLLAPVQTIFPEAXIKAVVFGSLILIITAAKRLGLY 725 HSP 9 Score: 107.372 bits (228), Expect = 3.17018e-82 Query: 228 NLQSKFTVDTMF*RVGTIPEGCFLRSTGWLPSNACSAIPXXXXXXXXXXXFNLMLSVLGFDD 413 HSP 10 Score: 22.6031 bits (43), Expect = 3.17018e-82 Query: 826 CIGLISHL 849 HSP 11 Score: 296.612 bits (641), Expect = 1.18691e-80 Query: 302 N*KRHHGNMPVLQA*WGI*HHMNQLCSES*NP*I*RENQASV*FEHTSVLPTXTVVHS*LQYKPSSQKQXSRLWFLVPLSS*LQQQNAWDCILHYELEVQWP*DPICSPNLL*TQCSEG*GQSQKGAS*DQLVGSLPMPVLP 727 | ||||
AC454_contig30197_v2 | 5.33686e-100 | 91.46% | ||
AC454_contig30197_v2 | ||||
HSP 1 Score: 189.391 bits (407), Expect = 5.33686e-100 Query: 661 KSLLVFPELCKHRVYVLKGCIGLISHLSSCKNDFS*HXNKQHNLWLFHAIDQPWEQLWLITRKGTMGICQSFKPDGEFNIT* 906 HSP 2 Score: 180.685 bits (388), Expect = 5.33686e-100 Query: 889 QQLCKIYGSSPTTTSEPRKLNADTEHIFFNXKTREPMHNLLLYLQFNPGSAATLPGIPPPNFCKQDLASLPTKSLLVF 1122 HSP 3 Score: 31.3091 bits (62), Expect = 5.33686e-100 Query: 1161 AKVQQKVKNSYSL 1199 HSP 4 Score: 182.06 bits (391), Expect = 1.37331e-99 Query: 886 RKNQQ*FCGKRSQILFAKVRRWNTWQCSC*AWIEL*I*KQIVHRFSGFXVKKDVFSVCI*FSWL*CSSGRRTIYFTELL 1122 HSP 5 Score: 179.31 bits (385), Expect = 1.37331e-99 Query: 662 HVMLNSPSGLKDWHIPMVPFLVMSQSCSQG*SIA*NNQRLCCLFXCQEKSFLQELR*EMRPIQPLRTYTRCLQSSGK 892 HSP 6 Score: 38.6404 bits (78), Expect = 1.37331e-99 Query: 1156 KKRE*EFLTFCWTF 1197 HSP 7 Score: 177.478 bits (381), Expect = 1.3e-92 Query: 891 KYMVLLPLLHQSQEN*MQTLNTSFLTXKPENRCTICFYIYSSIQAQQLHCQVFHLLTFANKIWLLFPQNHCWF 1109 HSP 8 Score: 176.561 bits (379), Expect = 1.3e-92 Query: 663 PQNHCWFFLNSVSTGYMFSKAV*VSSLTLAPVRTIFPDTKISSTIFGCFMR*INPGNSSGS*LEKAPWEYASPSSLMGNLTSH 911 HSP 9 Score: 22.6031 bits (43), Expect = 1.3e-92 Query: 1172 QKSNRKLKI 1198 HSP 10 Score: 173.812 bits (373), Expect = 3.34335e-92 Query: 890 KTSNDFVGREARSCLQKLGGGIPGNVAAEPGLNCKYKSKLCIGSLVXKLKKMCSVSAFNFLGSDVVVGEEPYILQSC* 1123 HSP 11 Score: 168.313 bits (361), Expect = 3.34335e-92 Query: 663 M*C*IPHQA*RTGIFPWCLF*L*ARAVPRVDLSHETTKDCAAYFXVRKNRSYRS*GER*DLYSL*EHIPGAYRVQE 890 HSP 12 Score: 33.1419 bits (66), Expect = 3.34335e-92 Query: 1161 ERIRIFNFLLDFC 1199 HSP 13 Score: 168.313 bits (361), Expect = 5.89437e-86 Query: 890 TTL*NIWFFSHYYIRAKKIKCRH*THLF*LXNQRTDAQFAFIFTVQSRLSSYIARYSTS*LLQTRSGFSSHKIIAGF 1120 HSP 14 Score: 166.939 bits (358), Expect = 5.89437e-86 Query: 662 FS*TL*APGICSQRLYRSHLSP*LL*ERFFLTXK*AAQSLVVSCDRSTLGTALAHN*KRHHGNMPVLQA*WGI*HHM 892 HSP 15 Score: 169.688 bits (364), Expect = 6.49215e-50 Query: 879 RVQEKPAMILWEEKPDLVCKS*EVEYLAM*LLSLD*TVNIKANCASVLWFXS*KRCVQCLHLIFLALM**WEKNHIFYRVV 1121 HSP 16 Score: 47.8046 bits (98), Expect = 6.49215e-50 Query: 448 AEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLA 579 HSP 17 Score: 190.307 bits (409), Expect = 1.18912e-48 Query: 661 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ*FCGKRSQILFAK 939 | ||||
AC454_contig27986_v2 | 6.50927e-12 | 100.00% | ||
AC454_contig27986_v2 | ||||
HSP 1 Score: 64.3001 bits (134), Expect = 6.50927e-12 Query: 825 HCWFFLNSVSTGYMFSKAV*VSSLTL 902 HSP 2 Score: 22.6031 bits (43), Expect = 6.50927e-12 Query: 805 HLSSCKNDF 831 | ||||
AC454_contig3523_v2 | 3.92115e-11 | 96.15% | ||
AC454_contig3523_v2 | ||||
HSP 1 Score: 65.6747 bits (137), Expect = 3.92115e-11 Query: 379 VFCITSLKCNGLKIQFAVQIYCRHNV 456 | ||||
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Blast Hits to Contigs V2 CC454
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_CC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
CC454_contig1167_v2 | 0 | 97.11% | ||
CC454_contig1167_v2 | ||||
HSP 1 Score: 622.398 bits (1352), Expect = 0 Query: 199 I*FF*F*XFRSSNPSTDNIKLKRE*XKNL*EKKGMAEQALEGSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ*FCGKRSQILFAKVRRWNTWQCSC*AWIEL*I*KQIVHRFSGF 1029 HSP 2 Score: 65.6747 bits (137), Expect = 0 Query: 1026 FXS*KRCVQCLHLIFLALM**WEKNHIFYRVVXE 1127 HSP 3 Score: 34.5166 bits (69), Expect = 0 Query: 116 KLYI*KQLPF*TLPAPSQIS 175 HSP 4 Score: 32.6837 bits (65), Expect = 0 Query: 1159 KRE*EFLTFCWTF 1197 HSP 5 Score: 32.2255 bits (64), Expect = 0 Query: 69 PYILLSFKSPEFQ 107 HSP 6 Score: 591.24 bits (1284), Expect = 0 Query: 230 HQTLAQTTSN*RESKRRIYKKRKEWQNRHWKGANQLISRSTLLGLSLPFRTLCLQ*IWTANWILRPLHFKLVMQNTIPSVLLL*L*G*GNQKPQP*XLLLGRWFVLELRVNNSXSWQHGSMLELYRSLVFPLNSRILRFRT*LVHVMLNSPSGLKDWHIPMVPFLVMSQSCSQG*SIA*NNQRLCCLFXCQEKSFLQELR*EMRPIQPLRTYTRCLQSSGKTSNDFVGREARSCLQKLGGGIPGNVAAEPGLNCKYKSKLCIGSLVXKLKK 1042 HSP 7 Score: 65.2165 bits (136), Expect = 0 Query: 1031 KLKKMCSVSAFNFLGSDVVVGEEPYILQSC* 1123 HSP 8 Score: 30.3927 bits (60), Expect = 0 Query: 1161 ERIRIFNFLLDFC 1199 HSP 9 Score: 542.67 bits (1178), Expect = 0 Query: 316 FFNXKTREPMHNLLLYLQFNPGSAATLPGIPPPNFCKQDLASLPTKSLLVFPELCKHRVYVLKGCIGLISHLSSCKNDFS*HXNKQHNLWLFHAIDQPWEQLWLITRKGTMGICQSFKPDGEFNIT*TNYVLNLKILEFSGKTKLLYNSSILPCCQXXXXXXXXXXTNHLPRSKXQGCGFWFPYPHNYSSKTLGIVFCITSLKCNGLKIQFAVQIYCRHNVLKGRDNPRRVLLEINWLAPFQ 1041 HSP 10 Score: 70.2568 bits (147), Expect = 0 Query: 1031 TTL*NIWFFSHYYIRAKKIKCRH*THLF*L 1120 HSP 11 Score: 39.0986 bits (79), Expect = 0 Query: 116 GDLGGSGKSLKRELFLYIEF 175 HSP 12 Score: 32.2255 bits (64), Expect = 0 Query: 72 LKFWGFKREKDI 107 HSP 13 Score: 27.1852 bits (53), Expect = 0 Query: 1161 AKVQQKVKNSYSL 1199 HSP 14 Score: 25.3524 bits (49), Expect = 0 Query: 228 NLMLSVLGFDD 260 HSP 15 Score: 560.998 bits (1218), Expect = 1.06552e-172 Query: 240 *HRQHQIKERVXEEFIRKERNGRTGIGREPTS*SQEAPFWDCPYPSEHCVYSKFGLQIGS*GHCTXXXXCRIQSQAFCCCNYEDKGTKNHSLDXCFWEDGLYWS*EXXXXXXGSTEVCSNYTEAWFSR*IQGF*DSEHSWFM*C*IPHQA*RTGIFPWCLF*L*ARAVPRVDLSHETTKDCAAYFXVRKNRSYRS*GER*DLYSL*EHIPGAYRVQEKPAMILWEEKPDLVCKS*EVEYLAM*LLSLD*TVNIKANCASVLWFXS*KR 1043 HSP 16 Score: 64.3001 bits (134), Expect = 1.06552e-172 Query: 1027 FXVKKDVFSVCI*FSWL*CSSGRRTIYFTELL 1122 HSP 17 Score: 453.777 bits (984), Expect = 3.0547e-169 Query: 453 KPENRCTICFYIYSSIQAQQLHCQVFHLLTFANKIWLLFPQNHCWFFLNSVSTGYMFSKAV*VSSLTLAPVRTIFPDTKISSTIFGCFMR*INPGNSSGS*LEKAPWEYASPSSLMGNLTSHEPTMF*ILKSLNLAGKPSFCIIRAYFRAANFDCCSLLAPVQTIFPEAXIKAVVFGSLILIITAAKRLGLY 1028 HSP 18 Score: 92.2508 bits (195), Expect = 3.0547e-169 Query: 300 NLQSKFTVDTMF*RVGTIPEGCFLRSTGWLPSNACSAI 413 HSP 19 Score: 69.3404 bits (145), Expect = 3.0547e-169 Query: 1021 QQLCKIYGSSPTTTSEPRKLNADTEHIFFNXKTR 1122 HSP 20 Score: 38.6404 bits (78), Expect = 3.0547e-169 Query: 112 IWEGAGRV*KGSCFYI*SLE 171 HSP 21 Score: 28.1016 bits (55), Expect = 3.0547e-169 Query: 68 *NSGDLKERRI*G 106 HSP 22 Score: 507.846 bits (1102), Expect = 6.90492e-153 Query: 302 F*LXNQRTDAQFAFIFTVQSRLSSYIARYSTS*LLQTRSGFSSHKIIAGFS*TL*APGICSQRLYRSHLSP*LL*ERFFLTXK*AAQSLVVSCDRSTLGTALAHN*KRHHGNMPVLQA*WGI*HHMNQLCSES*NP*I*RENQASV*FEHTSVLPTXTVVHS*LQYKPSSQKQXSRLWFLVPLSS*LQQQNAWDCILHYELEVQWP*DPICSPNLL*TQCSEG*GQSQKGAS*DQLVGSLPMPVLP 1039 HSP 23 Score: 51.4703 bits (106), Expect = 6.90492e-153 Query: 1026 KYMVLLPLLHQSQEN*MQTLNTSFLTXK 1109 | ||||
CC454_contig3695_v2 | 5.03381e-42 | 85.90% | ||
CC454_contig3695_v2 | ||||
HSP 1 Score: 169.23 bits (363), Expect = 5.03381e-42 Query: 267 RVXEEFIRKERNGRTGIGREPTS*SQEAPFWDCPYPSEHCVYSKFGLQIGS*GHCTXXXXCRIQSQAFCCCNYEDKGT 500 HSP 2 Score: 167.855 bits (360), Expect = 1.30527e-41 Query: 268 E*XKNL*EKKGMAEQALEGSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIRE 498 HSP 3 Score: 166.481 bits (357), Expect = 3.38457e-41 Query: 266 ESKRRIYKKRKEWQNRHWKGANQLISRSTLLGLSLPFRTLCLQ*IWTANWILRPLHFKLVMQNTIPSVLLL*L*G*GN 499 HSP 4 Score: 152.734 bits (327), Expect = 4.65093e-37 Query: 316 FPYPHNYSSKTLGIVFCITSLKCNGLKIQFAVQIYCRHNVLKGRDNPRRVLLEINWLAPFQ 498 HSP 5 Score: 147.236 bits (315), Expect = 2.10258e-35 Query: 302 VPLSS*LQQQNAWDCILHYELEVQWP*DPICSPNLL*TQCSEG*GQSQKGAS*DQLVGSLPMPVLP 499 HSP 6 Score: 95.4583 bits (202), Expect = 6.36587e-25 Query: 297 NLQSKFTVDTMF*RVGTIPEGCFLRSTGWLPSNACSAIP 413 HSP 7 Score: 36.8076 bits (74), Expect = 6.36587e-25 Query: 453 GSLILIITAAKRLGLY 500 | ||||
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Blast Hits to Contigs V2 CCall
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_CCall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
CCall_contig1245_v2 | 0 | 97.11% | ||
CCall_contig1245_v2 | ||||
HSP 1 Score: 622.398 bits (1352), Expect = 0 Query: 199 I*FF*F*XFRSSNPSTDNIKLKRE*XKNL*EKKGMAEQALEGSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ*FCGKRSQILFAKVRRWNTWQCSC*AWIEL*I*KQIVHRFSGF 1029 HSP 2 Score: 65.6747 bits (137), Expect = 0 Query: 1026 FXS*KRCVQCLHLIFLALM**WEKNHIFYRVVXE 1127 HSP 3 Score: 34.5166 bits (69), Expect = 0 Query: 116 KLYI*KQLPF*TLPAPSQIS 175 HSP 4 Score: 32.6837 bits (65), Expect = 0 Query: 1159 KRE*EFLTFCWTF 1197 HSP 5 Score: 32.2255 bits (64), Expect = 0 Query: 69 PYILLSFKSPEFQ 107 HSP 6 Score: 591.24 bits (1284), Expect = 0 Query: 230 HQTLAQTTSN*RESKRRIYKKRKEWQNRHWKGANQLISRSTLLGLSLPFRTLCLQ*IWTANWILRPLHFKLVMQNTIPSVLLL*L*G*GNQKPQP*XLLLGRWFVLELRVNNSXSWQHGSMLELYRSLVFPLNSRILRFRT*LVHVMLNSPSGLKDWHIPMVPFLVMSQSCSQG*SIA*NNQRLCCLFXCQEKSFLQELR*EMRPIQPLRTYTRCLQSSGKTSNDFVGREARSCLQKLGGGIPGNVAAEPGLNCKYKSKLCIGSLVXKLKK 1042 HSP 7 Score: 65.2165 bits (136), Expect = 0 Query: 1031 KLKKMCSVSAFNFLGSDVVVGEEPYILQSC* 1123 HSP 8 Score: 30.3927 bits (60), Expect = 0 Query: 1161 ERIRIFNFLLDFC 1199 HSP 9 Score: 542.67 bits (1178), Expect = 0 Query: 316 FFNXKTREPMHNLLLYLQFNPGSAATLPGIPPPNFCKQDLASLPTKSLLVFPELCKHRVYVLKGCIGLISHLSSCKNDFS*HXNKQHNLWLFHAIDQPWEQLWLITRKGTMGICQSFKPDGEFNIT*TNYVLNLKILEFSGKTKLLYNSSILPCCQXXXXXXXXXXTNHLPRSKXQGCGFWFPYPHNYSSKTLGIVFCITSLKCNGLKIQFAVQIYCRHNVLKGRDNPRRVLLEINWLAPFQ 1041 HSP 10 Score: 70.2568 bits (147), Expect = 0 Query: 1031 TTL*NIWFFSHYYIRAKKIKCRH*THLF*L 1120 HSP 11 Score: 39.0986 bits (79), Expect = 0 Query: 116 GDLGGSGKSLKRELFLYIEF 175 HSP 12 Score: 32.2255 bits (64), Expect = 0 Query: 72 LKFWGFKREKDI 107 HSP 13 Score: 27.1852 bits (53), Expect = 0 Query: 1161 AKVQQKVKNSYSL 1199 HSP 14 Score: 25.3524 bits (49), Expect = 0 Query: 228 NLMLSVLGFDD 260 HSP 15 Score: 560.998 bits (1218), Expect = 1.10731e-172 Query: 240 *HRQHQIKERVXEEFIRKERNGRTGIGREPTS*SQEAPFWDCPYPSEHCVYSKFGLQIGS*GHCTXXXXCRIQSQAFCCCNYEDKGTKNHSLDXCFWEDGLYWS*EXXXXXXGSTEVCSNYTEAWFSR*IQGF*DSEHSWFM*C*IPHQA*RTGIFPWCLF*L*ARAVPRVDLSHETTKDCAAYFXVRKNRSYRS*GER*DLYSL*EHIPGAYRVQEKPAMILWEEKPDLVCKS*EVEYLAM*LLSLD*TVNIKANCASVLWFXS*KR 1043 HSP 16 Score: 64.3001 bits (134), Expect = 1.10731e-172 Query: 1027 FXVKKDVFSVCI*FSWL*CSSGRRTIYFTELL 1122 HSP 17 Score: 453.777 bits (984), Expect = 3.17451e-169 Query: 453 KPENRCTICFYIYSSIQAQQLHCQVFHLLTFANKIWLLFPQNHCWFFLNSVSTGYMFSKAV*VSSLTLAPVRTIFPDTKISSTIFGCFMR*INPGNSSGS*LEKAPWEYASPSSLMGNLTSHEPTMF*ILKSLNLAGKPSFCIIRAYFRAANFDCCSLLAPVQTIFPEAXIKAVVFGSLILIITAAKRLGLY 1028 HSP 18 Score: 92.2508 bits (195), Expect = 3.17451e-169 Query: 300 NLQSKFTVDTMF*RVGTIPEGCFLRSTGWLPSNACSAI 413 HSP 19 Score: 69.3404 bits (145), Expect = 3.17451e-169 Query: 1021 QQLCKIYGSSPTTTSEPRKLNADTEHIFFNXKTR 1122 HSP 20 Score: 38.6404 bits (78), Expect = 3.17451e-169 Query: 112 IWEGAGRV*KGSCFYI*SLE 171 HSP 21 Score: 28.1016 bits (55), Expect = 3.17451e-169 Query: 68 *NSGDLKERRI*G 106 HSP 22 Score: 507.846 bits (1102), Expect = 7.17574e-153 Query: 302 F*LXNQRTDAQFAFIFTVQSRLSSYIARYSTS*LLQTRSGFSSHKIIAGFS*TL*APGICSQRLYRSHLSP*LL*ERFFLTXK*AAQSLVVSCDRSTLGTALAHN*KRHHGNMPVLQA*WGI*HHMNQLCSES*NP*I*RENQASV*FEHTSVLPTXTVVHS*LQYKPSSQKQXSRLWFLVPLSS*LQQQNAWDCILHYELEVQWP*DPICSPNLL*TQCSEG*GQSQKGAS*DQLVGSLPMPVLP 1039 HSP 23 Score: 51.4703 bits (106), Expect = 7.17574e-153 Query: 1026 KYMVLLPLLHQSQEN*MQTLNTSFLTXK 1109 | ||||
CCall_contig20509_v2 | 5.23124e-42 | 85.90% | ||
CCall_contig20509_v2 | ||||
HSP 1 Score: 169.23 bits (363), Expect = 5.23124e-42 Query: 267 RVXEEFIRKERNGRTGIGREPTS*SQEAPFWDCPYPSEHCVYSKFGLQIGS*GHCTXXXXCRIQSQAFCCCNYEDKGT 500 HSP 2 Score: 167.855 bits (360), Expect = 1.35646e-41 Query: 268 E*XKNL*EKKGMAEQALEGSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIRE 498 HSP 3 Score: 166.481 bits (357), Expect = 3.51732e-41 Query: 266 ESKRRIYKKRKEWQNRHWKGANQLISRSTLLGLSLPFRTLCLQ*IWTANWILRPLHFKLVMQNTIPSVLLL*L*G*GN 499 HSP 4 Score: 152.734 bits (327), Expect = 4.83334e-37 Query: 316 FPYPHNYSSKTLGIVFCITSLKCNGLKIQFAVQIYCRHNVLKGRDNPRRVLLEINWLAPFQ 498 HSP 5 Score: 147.236 bits (315), Expect = 2.18505e-35 Query: 302 VPLSS*LQQQNAWDCILHYELEVQWP*DPICSPNLL*TQCSEG*GQSQKGAS*DQLVGSLPMPVLP 499 HSP 6 Score: 95.4583 bits (202), Expect = 6.61554e-25 Query: 297 NLQSKFTVDTMF*RVGTIPEGCFLRSTGWLPSNACSAIP 413 HSP 7 Score: 36.8076 bits (74), Expect = 6.61554e-25 Query: 453 GSLILIITAAKRLGLY 500 | ||||
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Blast Hits to C. Parasitica Protein
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_CparasiticaFilteredProteinModelsAAseqs)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
estExt_Genewise1Plus.C_91016 | 4.53356e-83 | 87.15% | ||
Crypa1|95100|estExt_Genewise1Plus.C_91016 | ||||
HSP 1 Score: 303.908 bits (777), Expect = 4.53356e-83 Query: 355 SGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRK 891 | ||||
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Blast Hits to MedicagoProt
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_MedicagoProt_20080227)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
IMGA|AC135100_45.5 Tran | 6.83682e-30 | 55.80% | ||
cription factor TFIID, C-terminal/DNA glycosylase, N-terminal chr08_pseudomolecule_IMGAG_V2 29847151-29848891 H EGN_Mt071002 20080227 | ||||
HSP 1 Score: 127.872 bits (320), Expect = 6.83682e-30 Query: 301 MAEQALEGSQP-VDLKKHPSG--IVPTL---QNIVSTVNLDCKLDLKAIALQARNAEYNPK---------------------RFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFK 633 | ||||
IMGA|AC174143_32.4 Tran | 6.83682e-30 | 55.80% | ||
cription factor TFIID, C-terminal/DNA glycosylase, N-terminal chr08_pseudomolecule_IMGAG_V2 29693861-29692121 H EGN_Mt071002 20080227 | ||||
HSP 1 Score: 127.872 bits (320), Expect = 6.83682e-30 Query: 301 MAEQALEGSQP-VDLKKHPSG--IVPTL---QNIVSTVNLDCKLDLKAIALQARNAEYNPK---------------------RFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFK 633 | ||||
IMGA|AC135100_43.5 Tran | 4.59653e-18 | 49.62% | ||
cription factor TFIID, C-terminal/DNA glycosylase, N-terminal chr08_pseudomolecule_IMGAG_V2 29852831-29854886 H EGN_Mt071002 20080227 | ||||
HSP 1 Score: 88.5817 bits (218), Expect = 4.59653e-18 Query: 373 LQNIVSTVNLDCKLDLKAIALQARNAE---YNPK----------RFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 726 | ||||
IMGA|AC174143_30.4 Tran | 4.59653e-18 | 49.62% | ||
cription factor TFIID, C-terminal/DNA glycosylase, N-terminal chr08_pseudomolecule_IMGAG_V2 29688181-29686126 H EGN_Mt071002 20080227 | ||||
HSP 1 Score: 88.5817 bits (218), Expect = 4.59653e-18 Query: 373 LQNIVSTVNLDCKLDLKAIALQARNAE---YNPK----------RFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 726 | ||||
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Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_PopulusProt_JamboreeModels1_1)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
estExt_Genewise1_v1.C_LG_XIII2048 | 8.78151e-104 | 95.52% | ||
jgi|Poptr1_1|730014|estExt_Genewise1_v1.C_LG_XIII2048 | ||||
HSP 1 Score: 374.015 bits (959), Expect = 8.78151e-104 Query: 301 MAEQA-LEGSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ 900 | ||||
estExt_fgenesh4_pg.C_LG_XIX0393 | 1.95632e-103 | 95.02% | ||
jgi|Poptr1_1|826131|estExt_fgenesh4_pg.C_LG_XIX0393 | ||||
HSP 1 Score: 372.859 bits (956), Expect = 1.95632e-103 Query: 301 MAEQA-LEGSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ 900 | ||||
eugene3.00190383 | 1.25411e-25 | 86.15% | ||
jgi|Poptr1_1|573909|eugene3.00190383 | ||||
HSP 1 Score: 114.39 bits (285), Expect = 1.25411e-25 Query: 706 SHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ 900 | ||||
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Blast Hits to Contig V2 RO454
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_RO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
RO454_contig14292_v2 | 0 | 99.25% | ||
RO454_contig14292_v2 | ||||
HSP 1 Score: 619.191 bits (1345), Expect = 0 Query: 325 SQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ*FCGKRSQILFAKVRRWNTWQCSC*AWIEL*I*KQIVHRFSGFXVKKDVFSVCI*FSWL*CSSGRRTIYFTELL 1122 HSP 2 Score: 68.8822 bits (144), Expect = 0 Query: 230 HQTLAQTTSN*RESKRRIYKKRKEWQNR 313 HSP 3 Score: 611.401 bits (1328), Expect = 0 Query: 320 KGANQLISRSTLLGLSLPFRTLCLQ*IWTANWILRPLHFKLVMQNTIPSVLLL*L*G*GNQKPQP*XLLLGRWFVLELRVNNSXSWQHGSMLELYRSLVFPLNSRILRFRT*LVHVMLNSPSGLKDWHIPMVPFLVMSQSCSQG*SIA*NNQRLCCLFXCQEKSFLQELR*EMRPIQPLRTYTRCLQSSGKTSNDFVGREARSCLQKLGGGIPGNVAAEPGLNCKYKSKLCIGSLVXKLKKMCSVSAFNFLGSDVVVGEEPYILQSC* 1123 HSP 4 Score: 66.5912 bits (139), Expect = 0 Query: 226 RSSNPSTDNIKLKRE*XKNL*EKKGMAEQALEG 324 HSP 5 Score: 623.315 bits (1354), Expect = 0 Query: 322 QQLCKIYGSSPTTTSEPRKLNADTEHIFFNXKTREPMHNLLLYLQFNPGSAATLPGIPPPNFCKQDLASLPTKSLLVFPELCKHRVYVLKGCIGLISHLSSCKNDFS*HXNKQHNLWLFHAIDQPWEQLWLITRKGTMGICQSFKPDGEFNIT*TNYVLNLKILEFSGKTKLLYNSSILPCCQXXXXXXXXXXTNHLPRSKXQGCGFWFPYPHNYSSKTLGIVFCITSLKCNGLKIQFAVQIYCRHNVLKGRDNPRRVLLEINWLAP 1122 HSP 6 Score: 42.3061 bits (86), Expect = 0 Query: 228 LPSNACSAIPXXXXXXXXXXXFNLMLSVLGFDD 326 HSP 7 Score: 597.197 bits (1297), Expect = 0 Query: 321 REPTS*SQEAPFWDCPYPSEHCVYSKFGLQIGS*GHCTXXXXCRIQSQAFCCCNYEDKGTKNHSLDXCFWEDGLYWS*EXXXXXXGSTEVCSNYTEAWFSR*IQGF*DSEHSWFM*C*IPHQA*RTGIFPWCLF*L*ARAVPRVDLSHETTKDCAAYFXVRKNRSYRS*GER*DLYSL*EHIPGAYRVQEKPAMILWEEKPDLVCKS*EVEYLAM*LLSLD*TVNIKANCASVLWFXS*KRCVQCLHLIFLALM**WEKNHIFYRVV 1121 HSP 8 Score: 60.6344 bits (126), Expect = 0 Query: 240 *HRQHQIKERVXEEFIRKERNGRTGI 317 HSP 9 Score: 591.24 bits (1284), Expect = 2.24641e-169 Query: 323 TTL*NIWFFSHYYIRAKKIKCRH*THLF*LXNQRTDAQFAFIFTVQSRLSSYIARYSTS*LLQTRSGFSSHKIIAGFS*TL*APGICSQRLYRSHLSP*LL*ERFFLTXK*AAQSLVVSCDRSTLGTALAHN*KRHHGNMPVLQA*WGI*HHMNQLCSES*NP*I*RENQASV*FEHTSVLPTXTVVHS*LQYKPSSQKQXSRLWFLVPLSS*LQQQNAWDCILHYELEVQWP*DPICSPNLL*TQCSEG*GQSQKGAS*DQLVGS 1120 HSP 10 Score: 511.512 bits (1110), Expect = 1.87401e-161 Query: 453 KYMVLLPLLHQSQEN*MQTLNTSFLTXKPENRCTICFYIYSSIQAQQLHCQVFHLLTFANKIWLLFPQNHCWFFLNSVSTGYMFSKAV*VSSLTLAPVRTIFPDTKISSTIFGCFMR*INPGNSSGS*LEKAPWEYASPSSLMGNLTSHEPTMF*ILKSLNLAGKPSFCIIRAYFRAANFDCCSLLAPVQTIFPEAXIKAVVFGSLILIITAAKRLGLY 1109 HSP 11 Score: 75.2971 bits (158), Expect = 1.87401e-161 Query: 324 NLQSKFTVDTMF*RVGTIPEGCFLRSTGWL 413 | ||||
RO454_contig10552_v2 | 1.30257e-66 | 93.65% | ||
RO454_contig10552_v2 | ||||
HSP 1 Score: 128.908 bits (275), Expect = 1.30257e-66 Query: 199 I*FF*F*XFRSSNPSTDNIKLKRE*XKNL*EKKGMAEQALEGSQPVDLKKHPSGIVPTLQNIV 387 HSP 2 Score: 81.712 bits (172), Expect = 1.30257e-66 Query: 538 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDF 639 HSP 3 Score: 81.2538 bits (171), Expect = 1.30257e-66 Query: 74 YPSLF*IPRISKFSKLYI*KQLPF*TLPAPSQISVN 181 HSP 4 Score: 89.5016 bits (189), Expect = 3.63767e-58 Query: 228 *RVGTIPEGCFLRSTGWLPSNACSAIPXXXXXXXXXXXFNLMLSVLGFDD 377 HSP 5 Score: 87.2105 bits (184), Expect = 3.63767e-58 Query: 537 LKSLNLAGKPSFCIIRAYFRAANFDCCSLLAPVQT 641 HSP 6 Score: 86.7523 bits (183), Expect = 3.63767e-58 Query: 68 NGDLGGSGKSLKRELFLYIEFGEF*NSGDLKERRI*G 178 HSP 7 Score: 119.285 bits (254), Expect = 1.91599e-55 Query: 230 HQTLAQTTSN*RESKRRIYKKRKEWQNRHWKGANQLISRSTLLGLSLPF 376 HSP 8 Score: 75.7553 bits (159), Expect = 1.91599e-55 Query: 539 FVLELRVNNSXSWQHGSMLELYRSLVFPLNSRIL 640 HSP 9 Score: 59.2598 bits (123), Expect = 1.91599e-55 Query: 69 PYILLSFKSPEFQNSPNSIYKNN 137 HSP 10 Score: 113.328 bits (241), Expect = 2.64055e-44 Query: 240 *HRQHQIKERVXEEFIRKERNGRTGIGREPTS*SQEAPFWDCPYPS 377 HSP 11 Score: 62.4673 bits (130), Expect = 2.64055e-44 Query: 540 LYWS*EXXXXXXGSTEVCSNYTEAWFSR*IQGF* 641 HSP 12 Score: 40.9315 bits (83), Expect = 2.64055e-44 Query: 91 NPQNFKILQTLYIKTT 138 HSP 13 Score: 80.7956 bits (170), Expect = 1.01386e-36 Query: 70 IWEGAGRV*KGSCFYI*SLENFEILGI*KREGYK 171 HSP 14 Score: 57.8852 bits (120), Expect = 1.01386e-36 Query: 302 SEG*GQSQKGAS*DQLVGSLPMPVLP 379 HSP 15 Score: 52.3867 bits (108), Expect = 1.01386e-36 Query: 574 KILEFSGKTKLLYNSSILPCCQ 639 HSP 16 Score: 67.9658 bits (142), Expect = 8.24787e-25 Query: 509 *NP*I*RENQASV*FEHTSVLPTXTVVHS*LQYKPSSQKQXSRL 640 HSP 17 Score: 63.8419 bits (133), Expect = 8.24787e-25 Query: 72 KGVVFIYRVWRILKFWGFKREKDI 143 | ||||
RO454_contig17191_v2 | 5.9197e-50 | 97.92% | ||
RO454_contig17191_v2 | ||||
HSP 1 Score: 111.496 bits (237), Expect = 5.9197e-50 Query: 394 VNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 537 HSP 2 Score: 80.7956 bits (170), Expect = 5.9197e-50 Query: 270 VXEEFIRKERNGRTGIGREPTS*SQEAPFWDCPYPS 377 HSP 3 Score: 40.9315 bits (83), Expect = 5.9197e-50 Query: 585 EVCSNYTEAWFSR*IQGF 638 HSP 4 Score: 116.078 bits (247), Expect = 7.86681e-47 Query: 394 HLPRSKXQGCGFWFPYPHNYSSKTLGIVFCITSLKCNGLKIQFAVQIY 537 HSP 5 Score: 66.1329 bits (138), Expect = 7.86681e-47 Query: 297 TVDTMF*RVGTIPEGCFLRSTGWLPSNACSAIP 395 HSP 6 Score: 40.4733 bits (82), Expect = 7.86681e-47 Query: 588 KSLNLAGKPSFCIIRAY 638 HSP 7 Score: 104.164 bits (221), Expect = 6.24665e-45 Query: 396 KFGLQIGS*GHCTXXXXCRIQSQAFCCCNYEDKGTKNHSLDXCFWED 536 HSP 8 Score: 79.8792 bits (168), Expect = 6.24665e-45 Query: 269 SKRRIYKKRKEWQNRHWKGANQLISRSTLLGLSLPFRTL 385 HSP 9 Score: 32.2255 bits (64), Expect = 6.24665e-45 Query: 590 MLELYRSLVFPLNSRI 637 HSP 10 Score: 107.372 bits (228), Expect = 1.9952e-38 Query: 395 SSQKQXSRLWFLVPLSS*LQQQNAWDCILHYELEVQWP*DPICSPNL 535 HSP 11 Score: 51.4703 bits (106), Expect = 1.9952e-38 Query: 316 LKGRDNPRRVLLEINWLAPFQ 378 HSP 12 Score: 35.433 bits (71), Expect = 1.9952e-38 Query: 584 NP*I*RENQASV*FEHTS 637 HSP 13 Score: 92.2508 bits (195), Expect = 2.95718e-36 Query: 395 *IWTANWILRPLHFKLVMQNTIPSVLLL*L*G*GNQKPQP*XLLLGR 535 HSP 14 Score: 76.6717 bits (161), Expect = 2.95718e-36 Query: 268 E*XKNL*EKKGMAEQALEGSQPVDLKKHPSGIVPTL 375 HSP 15 Score: 68.424 bits (143), Expect = 3.28308e-25 Query: 396 IFPEAXIKAVVFGSLILIITAAKRLGLYXXXXXXXXXXXXSNLQSKF 536 HSP 16 Score: 46.8882 bits (96), Expect = 3.28308e-25 Query: 302 QCSEG*GQSQKGAS*DQLVGSLPMPVLP 385 HSP 17 Score: 34.0583 bits (68), Expect = 3.28308e-25 Query: 589 ILEFSGKTKLLYNSSI 636 | ||||
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Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_TAIR7_pep_20070425)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
AT1G55520.2 | 4.55765e-102 | 93.00% | ||
TBP2 (TATA binding protein 2); DNA binding / RNA polymerase II transcription factor | chr1:20729816-20731149 REVERSE | ||||
HSP 1 Score: 368.237 bits (944), Expect = 4.55765e-102 Query: 301 MAEQALEGSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ 900 | ||||
AT1G55520.1 | 4.55765e-102 | 93.00% | ||
TBP2 (TATA binding protein 2); DNA binding / RNA polymerase II transcription factor | chr1:20729816-20731149 REVERSE | ||||
HSP 1 Score: 368.237 bits (944), Expect = 4.55765e-102 Query: 301 MAEQALEGSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ 900 | ||||
AT3G13445.1 | 2.26194e-101 | 92.00% | ||
TBP1 (TRANSCRIPTION FACTOR IID-1); DNA binding / RNA polymerase II transcription factor | chr3:4380324-4381876 FORWARD | ||||
HSP 1 Score: 365.925 bits (938), Expect = 2.26194e-101 Query: 301 MAEQALEGSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ 900 | ||||
AT3G13445.2 | 8.91544e-90 | 93.22% | ||
TBP1 (TRANSCRIPTION FACTOR IID-1); DNA binding / RNA polymerase II transcription factor | chr3:4380324-4381658 FORWARD | ||||
HSP 1 Score: 327.405 bits (838), Expect = 8.91544e-90 Query: 301 MAEQALEGSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV 831 | ||||
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Blast Hits to Contigs V2 WO454
Analysis Date: 11-18-2009 (Blast: Oall_contigs_v2_vs_WO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
WO454_contig19061_v2 | 8.23833e-97 | 96.55% | ||
WO454_contig19061_v2 | ||||
HSP 1 Score: 349.764 bits (757), Expect = 8.23833e-97 Query: 655 TTTSEPRKLNADTEHIFFNXKTREPMHNLLLYLQFNPGSAATLPGIPPPNFCKQDLASLPTKSLLVFPELCKHRVYVLKGCIGLISHLSSCKNDFS*HXNKQHNLWLFHAIDQPWEQLWLITRKGTMGICQSFKPDGEFNIT*TN 1089 HSP 2 Score: 341.058 bits (738), Expect = 3.44029e-94 Query: 654 LLHQSQEN*MQTLNTSFLTXKPENRCTICFYIYSSIQAQQLHCQVFHLLTFANKIWLLFPQNHCWFFLNSVSTGYMFSKAV*VSSLTLAPVRTIFPDTKISSTIFGCFMR*INPGNSSGS*LEKAPWEYASPSSLMGNLTSHEPT 1088 HSP 3 Score: 338.767 bits (733), Expect = 2.99457e-93 Query: 655 VGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ*FCGKRSQILFAKVRRWNTWQCSC*AWIEL*I*KQIVHRFSGFXVKKDVFSVCI*FSWL*CSS 1089 HSP 4 Score: 21.6867 bits (41), Expect = 2.99457e-93 Query: 1086 *WEKNHIFY 1112 HSP 5 Score: 334.185 bits (723), Expect = 4.03285e-92 Query: 653 *LVHVMLNSPSGLKDWHIPMVPFLVMSQSCSQG*SIA*NNQRLCCLFXCQEKSFLQELR*EMRPIQPLRTYTRCLQSSGKTSNDFVGREARSCLQKLGGGIPGNVAAEPGLNCKYKSKLCIGSLVXKLKKMCSVSAFNFLGSDVVV 1090 HSP 6 Score: 321.813 bits (696), Expect = 2.1372e-88 Query: 653 SHYYIRAKKIKCRH*THLF*LXNQRTDAQFAFIFTVQSRLSSYIARYSTS*LLQTRSGFSSHKIIAGFS*TL*APGICSQRLYRSHLSP*LL*ERFFLTXK*AAQSLVVSCDRSTLGTALAHN*KRHHGNMPVLQA*WGI*HHMNQL 1093 HSP 7 Score: 319.522 bits (691), Expect = 1.04596e-87 Query: 654 SWFM*C*IPHQA*RTGIFPWCLF*L*ARAVPRVDLSHETTKDCAAYFXVRKNRSYRS*GER*DLYSL*EHIPGAYRVQEKPAMILWEEKPDLVCKS*EVEYLAM*LLSLD*TVNIKANCASVLWFXS*KRCVQCLHLIFLALM** 1088 | ||||
WO454_contig537_v2 | 2.03843e-48 | 93.94% | ||
WO454_contig537_v2 | ||||
HSP 1 Score: 135.781 bits (290), Expect = 2.03843e-48 Query: 199 I*FF*F*XFRSSNPSTDNIKLKRE*XKNL*EKKGMAEQALEGSQPVDLKKHPSGIVPTLQNIVSTV 396 HSP 2 Score: 51.9285 bits (107), Expect = 2.03843e-48 Query: 95 PRISKFSKLYI*KQLPF*TLPAPSQISVN 181 HSP 3 Score: 41.8479 bits (85), Expect = 2.03843e-48 Query: 69 PYILLSFKSPEFQNSP 116 HSP 4 Score: 99.124 bits (210), Expect = 1.94435e-37 Query: 228 TVDTMF*RVGTIPEGCFLRSTGWLPSNACSAIPXXXXXXXXXXXFNLMLSVLGFDD 395 HSP 5 Score: 50.0956 bits (103), Expect = 1.94435e-37 Query: 116 NGDLGGSGKSLKRELFLYIEF 178 HSP 6 Score: 43.2225 bits (88), Expect = 1.94435e-37 Query: 72 WRILKFWGFKREKDI 116 HSP 7 Score: 127.533 bits (272), Expect = 8.54873e-36 Query: 240 *HRQHQIKERVXEEFIRKERNGRTGIGREPTS*SQEAPFWDCPYPSEHCVYS 395 HSP 8 Score: 40.4733 bits (82), Expect = 8.54873e-36 Query: 74 YPSLF*IPRISKFSKLYI*KQLPF 145 HSP 9 Score: 127.075 bits (271), Expect = 3.71342e-31 Query: 230 HQTLAQTTSN*RESKRRIYKKRKEWQNRHWKGANQLISRSTLLGLSLPFRTLCLQ 394 HSP 10 Score: 25.3524 bits (49), Expect = 3.71342e-31 Query: 91 NPQNFKILQTLYIK 132 HSP 11 Score: 72.5479 bits (152), Expect = 2.31785e-21 Query: 316 YCRHNVLKGRDNPRRVLLEINWLAPFQ 396 HSP 12 Score: 46.8882 bits (96), Expect = 2.31785e-21 Query: 106 IWEGAGRV*KGSCFYI*SLENF 171 HSP 13 Score: 68.424 bits (143), Expect = 1.34401e-19 Query: 302 L*TQCSEG*GQSQKGAS*DQLVGSLPMPVLP 394 HSP 14 Score: 45.0554 bits (92), Expect = 1.34401e-19 Query: 68 GSGKSLKRELFLYIEFGEF*NSGDLKERRI*G 163 | ||||
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