WO454_contig11954_v2
| Name | WO454_contig11954_v2 |
|---|---|
| Accession | ID3370767 |
| Sequence | TAAAGTAAATTGGCCTTTTGCAGACTATTCCAACAGCGGCTCCATTATAG |
| Length | 500 |
| Type | contig |
| Organism | White Oak |
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References
| Dababase | Accession |
|---|---|
| GFF_source | SeqManPro |
ESTs in this contig
| Type | Feature | Position | ||
|---|---|---|---|---|
| EST | WOA_040195_1335_1073 | 0-270 | ||
| EST | WOA_080502_1631_1115 | 0-270 | ||
| EST | WOA_045848_1385_1218 | 70-232 | ||
| EST | WOA_021505_0675_2225 | 105-336 | ||
| EST | WOA_095188_0502_2873 | 148-383 | ||
| EST | WOA_122063_0851_3403 | 148-383 | ||
| point_mutation | WO454_contig11954_v2-snp238 | 237 | 239 | 0 |
| EST | WOB_019716_1677_2932 | 269-500 |
InterProScan Analysis
Analysis Date: 11-18-2009
(Interpro: WO454_contigs_v2)
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Blast Hits to Uniprot
Analysis Date: 11-18-2009 (Blast: WO454_v2_uniprot)
Best 10 Hits Shown | Show Best 25 Hits | Show All Hits
Note: Click a description for more details.
Best 10 Hits Shown | Show Best 25 Hits | Show All Hits
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
B9REN1_RICCO | 1.02623e-62 | 73.25% | ||
Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1776390 PE=4 SV=1 | ||||
HSP 1 Score: 242.276 bits (617), Expect = 1.02623e-62 Query: 28 ILQEIAWTGQRLKAYYTAGGIIWMFSGAAIIFLPRSMSAFMYXISIFIGVANALMMVTGISMQNVLIGENLGGCAFVCGSLSFLDKISCGLALYVLQSFQSCSPELQRTNAINVYISVTRFGLGLLPSFCALIGVAVTYSMKLHTPFSKPIMEPLLE 498 | ||||
B9N6J9_POPTR | 2.89204e-57 | 68.15% | ||
Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_583307 PE=4 SV=1 | ||||
HSP 1 Score: 224.172 bits (570), Expect = 2.89204e-57 Query: 28 ILQEIAWTGQRLKAYYTAGGIIWMFSGAAIIFLPRSMSAFMYXISIFIGVANALMMVTGISMQNVLIGENLGGCAFVCGSLSFLDKISCGLALYVLQSFQSCSPELQRTNAINVYISVTRFGLGLLPSFCALIGVAVTYSMKLHTPFSKPIMEPLLE 498 | ||||
B9HPR0_POPTR | 1.58691e-55 | 66.88% | ||
Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_768269 PE=4 SV=1 | ||||
HSP 1 Score: 218.394 bits (555), Expect = 1.58691e-55 Query: 28 ILQEIAWTGQRLKAYYTAGGIIWMFSGAAIIFLPRSMSAFMYXISIFIGVANALMMVTGISMQNVLIGENLGGCAFVCGSLSFLDKISCGLALYVLQSFQSCSPELQRTNAINVYISVTRFGLGLLPSFCALIGVAVTYSMKLHTPFSKPIMEPLLE 498 | ||||
A7QR84_VITVI | 1.58691e-55 | 66.67% | ||
Chromosome chr13 scaffold_149, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00003717001 PE=4 SV=1 | ||||
HSP 1 Score: 218.394 bits (555), Expect = 1.58691e-55 Query: 31 ILQEIAWTGQRLKAYYTAGGIIWMFSGAAIIFLPRSMSAFMYXISIFIGVANALMMVTGISMQNVLIGENLGGCAFVCGSLSFLDKISCGLALYVLQSFQSCSPELQRTNAINVYISVTRFGLGLLPSFCALIGVAVTYSMKLHTPFSKPIMEPLL 498 | ||||
Q8L7Z7_ARATH | 3.53528e-55 | 67.70% | ||
AT3g60070/T2O9_50 OS=Arabidopsis thaliana PE=2 SV=1 | ||||
HSP 1 Score: 217.238 bits (552), Expect = 3.53528e-55 Query: 28 ILQEIAWTGQRLKAYYTAGGIIWMFSGAAIIFLPRSMSAFMYXISIFIGVANALMMVTGISMQNVLIGENLGGCAFVCGSLSFLDKISCGLALYVLQSFQSCSPELQ-RTNAINVYISVTRFGLGLLPSFCALIGVAVTYSMKLHT--PFSKPIM-EPLLE 498 | ||||
Q9M1D6_ARATH | 1.13726e-53 | 67.10% | ||
Putative uncharacterized protein T2O9.50 OS=Arabidopsis thaliana GN=T2O9.50 PE=4 SV=1 | ||||
HSP 1 Score: 212.231 bits (539), Expect = 1.13726e-53 Query: 43 ILQEIAWTGQRLKAYYTAGGIIWMFSGAAIIFLPRSMSAFMYXISIFIGVANALMMVTGISMQNVLIGENLGGCAFVCGSLSFLDKISCGLALYVLQSFQSCSPELQ-RTNAINVYISVTRFGLGLLPSFCALIGVAVTYSMKLHT--PFSKPIM 498 | ||||
Q8L7S2_ARATH | 3.30892e-53 | 64.10% | ||
AT3g60070/T2O9_50 OS=Arabidopsis thaliana PE=2 SV=1 | ||||
HSP 1 Score: 210.69 bits (535), Expect = 3.30892e-53 Query: 31 ILQEIAWTGQRLKAYYTAGGIIWMFSGAAIIFLPRSMSAFMYXISIFIGVANALMMVTGISMQNVLIGENLGGCAFVCGSLSFLDKISCGLALYVLQSFQSCSPELQRTNAINVYISVTRFGLGLLPSFCALIGVAVTYSMKLHTPFSKPIMEPLL 498 | ||||
Q4PSQ7_ARATH | 3.30892e-53 | 64.10% | ||
Putative uncharacterized protein OS=Arabidopsis thaliana GN=At2g44280 PE=2 SV=1 | ||||
HSP 1 Score: 210.69 bits (535), Expect = 3.30892e-53 Query: 31 ILQEIAWTGQRLKAYYTAGGIIWMFSGAAIIFLPRSMSAFMYXISIFIGVANALMMVTGISMQNVLIGENLGGCAFVCGSLSFLDKISCGLALYVLQSFQSCSPELQRTNAINVYISVTRFGLGLLPSFCALIGVAVTYSMKLHTPFSKPIMEPLL 498 | ||||
Q8LK91_ARATH | 3.65844e-52 | 62.82% | ||
Putative uncharacterized protein AT2G44280/F4I1.9 OS=Arabidopsis thaliana GN=AT2G44280/F4I1.9 PE=2 SV=1 | ||||
HSP 1 Score: 207.223 bits (526), Expect = 3.65844e-52 Query: 31 ILQEIAWTGQRLKAYYTAGGIIWMFSGAAIIFLPRSMSAFMYXISIFIGVANALMMVTGISMQNVLIGENLGGCAFVCGSLSFLDKISCGLALYVLQSFQSCSPELQRTNAINVYISVTRFGLGLLPSFCALIGVAVTYSMKLHTPFSKPIMEPLL 498 | ||||
Q8L7I9_ARATH | 3.65844e-52 | 62.82% | ||
Putative uncharacterized protein At2g44280/F4I1.9 OS=Arabidopsis thaliana GN=At2g44280/F4I1.9 PE=2 SV=1 | ||||
HSP 1 Score: 207.223 bits (526), Expect = 3.65844e-52 Query: 31 ILQEIAWTGQRLKAYYTAGGIIWMFSGAAIIFLPRSMSAFMYXISIFIGVANALMMVTGISMQNVLIGENLGGCAFVCGSLSFLDKISCGLALYVLQSFQSCSPELQRTNAINVYISVTRFGLGLLPSFCALIGVAVTYSMKLHTPFSKPIMEPLL 498 | ||||
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Blast Hits to Contigs V2 AB454
Analysis Date: 11-18-2009 (Blast: WO454_contigs_v2_vs_AB454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
AB454_contig480_v2 | 5.18363e-72 | 89.17% | ||
AB454_contig480_v2 | ||||
HSP 1 Score: 260.872 bits (563), Expect = 5.18363e-72 Query: 139 ILQEIAWTGQRLKAYYTAGGIIWMFSGAAIIFLPRSMSAFMYXISIFIGVANALMMVTGISMQNVLIGENLGGCAFVCGSLSFLDKISCGLALYVLQSFQSCSPELQRTNAINVYISVTR 498 HSP 2 Score: 23.9778 bits (46), Expect = 5.18363e-72 Query: 115 RFGLGLLPS 141 HSP 3 Score: 232.463 bits (501), Expect = 1.19878e-63 Query: 143 VTEI*TFIAFVL*SSGEQLWKD*RTYKASPHXILSKKLNDPQTNAQPPRFSPIRTFCMLIPVTIIKAFATPINIDIXYMXALMLLGKKMIAAPENIQIMPPAV**AFRRWPVHAISCR 496 HSP 4 Score: 24.436 bits (47), Expect = 1.19878e-63 Query: 116 DGKRPKPN 139 HSP 5 Score: 231.088 bits (498), Expect = 4.8072e-62 Query: 145 N*NIDIYCICSLKFWRATLERLKNIQGKPT*XFVQEAQ*STNKCTATKILPN*NILHAYSSHHHQSICYTXKY*YXVHEXTHASR*ENDCCTRKHPNNATSSVVGLQALASPCNLL*N 498 HSP 6 Score: 221.924 bits (478), Expect = 2.75792e-59 Query: 143 STGDCMDWPTPEGLLHCWWHYLDVFWCSNHFLT*KHECXHVHNINIYXCSKCFDDGDWNKHAKCSNWGESXXXXXXXXXXXXLGQNXMWACLVCSSVFPKLLSRTSENKCNKCLYFSY 496 HSP 7 Score: 220.549 bits (475), Expect = 7.15131e-59 Query: 144 LFYRRLHGLANA*RPTTLLVALFGCFLVQQSFSYLEA*VXSCTXYQYLXV*QML**W*LE*ACKMF*LGRILVAVHLFVDH*ASWTKXHVGLPCMFFSLSKVALQNFREQMQ*MSIFQL 500 HSP 8 Score: 133.031 bits (284), Expect = 1.53475e-49 Query: 144 *LKYRHLLHLFSEVLESNFGKTEEHTRQAHMXFCPRSSMIHKQMHSHQDSPQLEHFACLFQSPSSK 341 HSP 9 Score: 76.6717 bits (161), Expect = 1.53475e-49 Query: 372 CT*XHSCF*VRK*LLHQKTSK*CHQQCSRPSGVGQSMQSPVE 497 | ||||
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Blast Hits to Contigs V2 ABall
Analysis Date: 11-18-2009 (Blast: WO454_contigs_v2_vs_ABall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
ABall_contig499_v2 | 5.28258e-72 | 89.17% | ||
ABall_contig499_v2 | ||||
HSP 1 Score: 260.872 bits (563), Expect = 5.28258e-72 Query: 139 ILQEIAWTGQRLKAYYTAGGIIWMFSGAAIIFLPRSMSAFMYXISIFIGVANALMMVTGISMQNVLIGENLGGCAFVCGSLSFLDKISCGLALYVLQSFQSCSPELQRTNAINVYISVTR 498 HSP 2 Score: 23.9778 bits (46), Expect = 5.28258e-72 Query: 115 RFGLGLLPS 141 HSP 3 Score: 232.463 bits (501), Expect = 1.22166e-63 Query: 143 VTEI*TFIAFVL*SSGEQLWKD*RTYKASPHXILSKKLNDPQTNAQPPRFSPIRTFCMLIPVTIIKAFATPINIDIXYMXALMLLGKKMIAAPENIQIMPPAV**AFRRWPVHAISCR 496 HSP 4 Score: 24.436 bits (47), Expect = 1.22166e-63 Query: 116 DGKRPKPN 139 HSP 5 Score: 231.088 bits (498), Expect = 4.89897e-62 Query: 145 N*NIDIYCICSLKFWRATLERLKNIQGKPT*XFVQEAQ*STNKCTATKILPN*NILHAYSSHHHQSICYTXKY*YXVHEXTHASR*ENDCCTRKHPNNATSSVVGLQALASPCNLL*N 498 HSP 6 Score: 221.924 bits (478), Expect = 2.81057e-59 Query: 143 STGDCMDWPTPEGLLHCWWHYLDVFWCSNHFLT*KHECXHVHNINIYXCSKCFDDGDWNKHAKCSNWGESXXXXXXXXXXXXLGQNXMWACLVCSSVFPKLLSRTSENKCNKCLYFSY 496 HSP 7 Score: 220.549 bits (475), Expect = 7.28783e-59 Query: 144 LFYRRLHGLANA*RPTTLLVALFGCFLVQQSFSYLEA*VXSCTXYQYLXV*QML**W*LE*ACKMF*LGRILVAVHLFVDH*ASWTKXHVGLPCMFFSLSKVALQNFREQMQ*MSIFQL 500 HSP 8 Score: 133.031 bits (284), Expect = 1.56405e-49 Query: 144 *LKYRHLLHLFSEVLESNFGKTEEHTRQAHMXFCPRSSMIHKQMHSHQDSPQLEHFACLFQSPSSK 341 HSP 9 Score: 76.6717 bits (161), Expect = 1.56405e-49 Query: 372 CT*XHSCF*VRK*LLHQKTSK*CHQQCSRPSGVGQSMQSPVE 497 | ||||
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Blast Hits to Contigs V2 AC454
Analysis Date: 11-18-2009 (Blast: WO454_contigs_v2_vs_AC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
AC454_contig11737_v2 | 6.10817e-45 | 100.00% | ||
AC454_contig11737_v2 | ||||
HSP 1 Score: 107.372 bits (228), Expect = 6.10817e-45 Query: 38 YFSYTVWFGSLTVILCTNWGGSYVQHETPYPFFETYNGA 154 HSP 2 Score: 66.5912 bits (139), Expect = 6.10817e-45 Query: 187 CGSLSFLDKISCGLALYVLQSFQSCSP 267 HSP 3 Score: 27.6434 bits (54), Expect = 6.10817e-45 Query: 149 ENKCNKCLYF 178 HSP 4 Score: 26.727 bits (52), Expect = 6.10817e-45 Query: 247 GENLGGCAFVCGSLSFL 297 HSP 5 Score: 99.124 bits (210), Expect = 1.61294e-42 Query: 37 RLHYRFRKRGMEFHAVRNCHPN*CTK*R*ETQTKPCN*N 153 HSP 6 Score: 67.5076 bits (141), Expect = 1.61294e-42 Query: 186 LESNFGKTEEHTRQAHMXFCPRSSMIHK 269 HSP 7 Score: 27.1852 bits (53), Expect = 1.61294e-42 Query: 154 IDIYCICSLK 183 HSP 8 Score: 26.2688 bits (51), Expect = 1.61294e-42 Query: 266 QTNAQPPRFSP 298 HSP 9 Score: 96.8329 bits (205), Expect = 8.08352e-38 Query: 38 GSIIGFEKGVWSFMLYVTATPISAQNDGKRPKPNRVTEI 154 HSP 10 Score: 58.3434 bits (121), Expect = 8.08352e-38 Query: 187 WRATLERLKNIQGKPT*XFVQEAQ*STNK 273 HSP 11 Score: 25.8106 bits (50), Expect = 8.08352e-38 Query: 267 KQMHSHQDS 293 HSP 12 Score: 23.0613 bits (44), Expect = 8.08352e-38 Query: 156 RHLLHLFSE 182 HSP 13 Score: 96.3747 bits (204), Expect = 1.39578e-35 Query: 39 IFQLHGLVWVSYRHFVH*LGWQLRTA*NSIPLFRNL*WS 155 HSP 14 Score: 62.9255 bits (131), Expect = 1.39578e-35 Query: 186 FVDH*ASWTKXHVGLPCMFFSLSKVALQ 269 HSP 15 Score: 21.6867 bits (41), Expect = 1.39578e-35 Query: 154 RTNAINVY 177 HSP 16 Score: 90.418 bits (191), Expect = 1.17216e-31 Query: 39 APL*VSKKGYGVSCCT*LPPQLVHKMTVRDPNQTV*LK 152 HSP 17 Score: 60.6344 bits (126), Expect = 1.17216e-31 Query: 185 SGEQLWKD*RTYKASPHXILSKKLNDPQTNAQPPRFSP 298 HSP 18 Score: 95.0001 bits (201), Expect = 1.37877e-30 Query: 37 ISVTRFGLGLLPSFCALIGVAVTYSMKLHTPFSKPIMEP 153 HSP 19 Score: 46.43 bits (95), Expect = 1.37877e-30 Query: 188 GQNXMWACLVCSSVFPKLLS 247 HSP 20 Score: 22.6031 bits (43), Expect = 1.37877e-30 Query: 225 GRILVAVHLFVDH*ASWTKXHVGL 296 | ||||
AC454_contig33727_v2 | 5.00064e-43 | 96.61% | ||
AC454_contig33727_v2 | ||||
HSP 1 Score: 170.146 bits (365), Expect = 5.00064e-43 Query: 323 YSTGDCMDWPTPEGLLHCWWHYLDVFWCSNHFLT*KHECXHVHNINIYXCSKCFDDGDW 499 HSP 2 Score: 138.988 bits (297), Expect = 1.19832e-33 Query: 322 SSHHHQSICYTXKY*YXVHEXTHASR*ENDCCTRKHPNNATSSVVGLQALASPCNLL*N 498 HSP 3 Score: 137.155 bits (293), Expect = 4.26885e-33 Query: 322 ILQEIAWTGQRLKAYYTAGGIIWMFSGAAIIFLPRSMSAFMYXISIFIGVANALMMVTG 498 HSP 4 Score: 132.573 bits (283), Expect = 1.02248e-31 Query: 323 PVTIIKAFATPINIDIXYMXALMLLGKKMIAAPENIQIMPPAV**AFRRWPVHAISCRI 499 HSP 5 Score: 122.951 bits (262), Expect = 8.05899e-29 Query: 324 LFYRRLHGLANA*RPTTLLVALFGCFLVQQSFSYLEA*VXSCTXYQYLXV*QML**W*L 500 HSP 6 Score: 106.455 bits (226), Expect = 7.446e-24 Query: 324 QSPSSKXXXXXXXXXXCT*XHSCF*VRK*LLHQKTSK*CHQQCSRPSGVGQSMQSPVE* 500 | ||||
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Blast Hits to Contigs V2 CC454
Analysis Date: 11-18-2009 (Blast: WO454_contigs_v2_vs_CC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
CC454_contig28239_v2 | 5.86634e-108 | 96.69% | ||
CC454_contig28239_v2 | ||||
HSP 1 Score: 273.701 bits (591), Expect = 5.86634e-108 Query: 1 IFIGVANALMMVTGISMQNVLIGENLGGCAFVCGSLSFLDKISCGLALYVLQSFQSCSPELQRTNAINVYISVTRFGLGLLPSFCALIGVAVTYSMKLHTPFSKPIMEPLLE*SAKGQFTL 363 HSP 2 Score: 134.406 bits (287), Expect = 5.86634e-108 Query: 362 YSTGDCMDWPTPEGLLHCWWHYLDVFWCSNHFLT*KHECXHVHNIN 499 HSP 3 Score: 274.618 bits (593), Expect = 4.9972e-99 Query: 2 KVNWPFADYSNSGSIIGFEKGVWSFMLYVTATPISAQNDGKRPKPNRVTEI*TFIAFVL*SSGEQLWKD*RTYKASPHXILSKKLNDPQTNAQPPRFSPIRTFCMLIPVTIIKAFATPIN 361 HSP 4 Score: 103.706 bits (220), Expect = 4.9972e-99 Query: 364 *YXVHEXTHASR*ENDCCTRKHPNNATSSVVGLQALASPCNLL*N 498 HSP 5 Score: 270.494 bits (584), Expect = 1.62077e-97 Query: 1 *SKLAFCRLFQQRLHYRFRKRGMEFHAVRNCHPN*CTK*R*ETQTKPCN*NIDIYCICSLKFWRATLERLKNIQGKPT*XFVQEAQ*STNKCTATKILPN*NILHAYSSHHHQSICYTXK 360 HSP 6 Score: 264.995 bits (572), Expect = 1.62077e-97 Query: 2 IYXCSKCFDDGDWNKHAKCSNWGESXXXXXXXXXXXXLGQNXMWACLVCSSVFPKLLSRTSENKCNKCLYFSYTVWFGSLTVILCTNWGGSYVQHETPYPFFETYNGAAVGIVCKRPIYF 361 HSP 7 Score: 108.288 bits (230), Expect = 1.62077e-97 Query: 361 ILQEIAWTGQRLKAYYTAGGIIWMFSGAAIIFLPRSMSAFMYXISI 498 HSP 8 Score: 102.79 bits (218), Expect = 1.62077e-97 Query: 362 IDIXYMXALMLLGKKMIAAPENIQIMPPAV**AFRRWPVHAISCRI 499 HSP 9 Score: 263.621 bits (569), Expect = 4.80906e-95 Query: 3 YLXV*QML**W*LE*ACKMF*LGRILVAVHLFVDH*ASWTKXHVGLPCMFFSLSKVALQNFREQMQ*MSIFQLHGLVWVSYRHFVH*LGWQLRTA*NSIPLFRNL*WSRCWNSLQKANLL 362 HSP 10 Score: 101.415 bits (215), Expect = 4.80906e-95 Query: 363 LFYRRLHGLANA*RPTTLLVALFGCFLVQQSFSYLEA*VXSCTXYQ 500 HSP 11 Score: 259.039 bits (559), Expect = 5.52262e-93 Query: 3 K*IGLLQTIPTAAPL*VSKKGYGVSCCT*LPPQLVHKMTVRDPNQTV*LKYRHLLHLFSEVLESNFGKTEEHTRQAHMXFCPRSSMIHKQMHSHQDSPQLEHFACLFQSPSSK 341 HSP 12 Score: 99.124 bits (210), Expect = 5.52262e-93 Query: 372 CT*XHSCF*VRK*LLHQKTSK*CHQQCSRPSGVGQSMQSPVE* 500 | ||||
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Blast Hits to Contigs V2 CCall
Analysis Date: 11-18-2009 (Blast: WO454_contigs_v2_vs_CCall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
CCall_contig44975_v2 | 6.09072e-108 | 96.69% | ||
CCall_contig44975_v2 | ||||
HSP 1 Score: 273.701 bits (591), Expect = 6.09072e-108 Query: 1 IFIGVANALMMVTGISMQNVLIGENLGGCAFVCGSLSFLDKISCGLALYVLQSFQSCSPELQRTNAINVYISVTRFGLGLLPSFCALIGVAVTYSMKLHTPFSKPIMEPLLE*SAKGQFTL 363 HSP 2 Score: 134.406 bits (287), Expect = 6.09072e-108 Query: 362 YSTGDCMDWPTPEGLLHCWWHYLDVFWCSNHFLT*KHECXHVHNIN 499 HSP 3 Score: 274.618 bits (593), Expect = 5.18834e-99 Query: 2 KVNWPFADYSNSGSIIGFEKGVWSFMLYVTATPISAQNDGKRPKPNRVTEI*TFIAFVL*SSGEQLWKD*RTYKASPHXILSKKLNDPQTNAQPPRFSPIRTFCMLIPVTIIKAFATPIN 361 HSP 4 Score: 103.706 bits (220), Expect = 5.18834e-99 Query: 364 *YXVHEXTHASR*ENDCCTRKHPNNATSSVVGLQALASPCNLL*N 498 HSP 5 Score: 270.494 bits (584), Expect = 1.68277e-97 Query: 1 *SKLAFCRLFQQRLHYRFRKRGMEFHAVRNCHPN*CTK*R*ETQTKPCN*NIDIYCICSLKFWRATLERLKNIQGKPT*XFVQEAQ*STNKCTATKILPN*NILHAYSSHHHQSICYTXK 360 HSP 6 Score: 264.995 bits (572), Expect = 1.68277e-97 Query: 2 IYXCSKCFDDGDWNKHAKCSNWGESXXXXXXXXXXXXLGQNXMWACLVCSSVFPKLLSRTSENKCNKCLYFSYTVWFGSLTVILCTNWGGSYVQHETPYPFFETYNGAAVGIVCKRPIYF 361 HSP 7 Score: 108.288 bits (230), Expect = 1.68277e-97 Query: 361 ILQEIAWTGQRLKAYYTAGGIIWMFSGAAIIFLPRSMSAFMYXISI 498 HSP 8 Score: 102.79 bits (218), Expect = 1.68277e-97 Query: 362 IDIXYMXALMLLGKKMIAAPENIQIMPPAV**AFRRWPVHAISCRI 499 HSP 9 Score: 263.621 bits (569), Expect = 4.99301e-95 Query: 3 YLXV*QML**W*LE*ACKMF*LGRILVAVHLFVDH*ASWTKXHVGLPCMFFSLSKVALQNFREQMQ*MSIFQLHGLVWVSYRHFVH*LGWQLRTA*NSIPLFRNL*WSRCWNSLQKANLL 362 HSP 10 Score: 101.415 bits (215), Expect = 4.99301e-95 Query: 363 LFYRRLHGLANA*RPTTLLVALFGCFLVQQSFSYLEA*VXSCTXYQ 500 HSP 11 Score: 259.039 bits (559), Expect = 5.73385e-93 Query: 3 K*IGLLQTIPTAAPL*VSKKGYGVSCCT*LPPQLVHKMTVRDPNQTV*LKYRHLLHLFSEVLESNFGKTEEHTRQAHMXFCPRSSMIHKQMHSHQDSPQLEHFACLFQSPSSK 341 HSP 12 Score: 99.124 bits (210), Expect = 5.73385e-93 Query: 372 CT*XHSCF*VRK*LLHQKTSK*CHQQCSRPSGVGQSMQSPVE* 500 | ||||
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Blast Hits to MedicagoProt
Analysis Date: 11-18-2009 (Blast: WO454_contigs_v2_vs_MedicagoProt_20080227)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
IMGA|AC155880_42.5 C19orf28 protein, identical chr02_p | 2.76232e-50 | 64.10% | ||
eudomolecule_IMGAG_V2 15050253-15058515 E EGN_Mt071002 20080227 | ||||
HSP 1 Score: 193.741 bits (491), Expect = 2.76232e-50 Query: 31 LQEIAWTGQRLKAYYTAGGIIWMFSGAAIIFLPRSMSAFMYXISIFIGVANALMMVTGISMQNVLIGENLGGCAFVCGSLSFLDKISCGLALYVLQSFQSCSPELQRTNAINVY-ISVTRFGLGLLPSFCALIGVAVTYSMKLHTPFSKPIMEPLL 495 | ||||
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Blast Hits to Contig V2 Oall
Analysis Date: 11-18-2009 (Blast: WO454_contigs_v2_vs_Oall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
Oall_contig13463_v2 | 3.2028e-100 | 90.00% | ||
Oall_contig13463_v2 | ||||
HSP 1 Score: 360.761 bits (781), Expect = 3.2028e-100 Query: 2 HCWWHYLDVFWCSNHFLT*KHECXHVHNINIYXCSKCFDDGDWNKHAKCSNWGESXXXXXXXXXXXXLGQNXMWACLVCSSVFPKLLSRTSENKCNKCLYFSYTVWFGSLTVILCTNWGGSYVQHETPYPFFETYNGAAVGIVCKRPIYF 451 HSP 2 Score: 355.721 bits (770), Expect = 1.05393e-98 Query: 1 *SKLAFCRLFQQRLHYRFRKRGMEFHAVRNCHPN*CTK*R*ETQTKPCN*NIDIYCICSLKFWRATLERLKNIQGKPT*XFVQEAQ*STNKCTATKILPN*NILHAYSSHHHQSICYTXKY*YXVHEXTHASR*ENDCCTRKHPNNATSS 450 HSP 3 Score: 348.389 bits (754), Expect = 1.69731e-96 Query: 2 KVNWPFADYSNSGSIIGFEKGVWSFMLYVTATPISAQNDGKRPKPNRVTEI*TFIAFVL*SSGEQLWKD*RTYKASPHXILSKKLNDPQTNAQPPRFSPIRTFCMLIPVTIIKAFATPINIDIXYMXALMLLGKKMIAAPENIQIMPPAV 451 HSP 4 Score: 347.015 bits (751), Expect = 4.40115e-96 Query: 1 TAGGIIWMFSGAAIIFLPRSMSAFMYXISIFIGVANALMMVTGISMQNVLIGENLGGCAFVCGSLSFLDKISCGLALYVLQSFQSCSPELQRTNAINVYISVTRFGLGLLPSFCALIGVAVTYSMKLHTPFSKPIMEPLLE*SAKGQFTL 450 HSP 5 Score: 334.643 bits (724), Expect = 2.33237e-92 Query: 3 LLVALFGCFLVQQSFSYLEA*VXSCTXYQYLXV*QML**W*LE*ACKMF*LGRILVAVHLFVDH*ASWTKXHVGLPCMFFSLSKVALQNFREQMQ*MSIFQLHGLVWVSYRHFVH*LGWQLRTA*NSIPLFRNL*WSRCWNSLQKANLL 449 HSP 6 Score: 321.355 bits (695), Expect = 2.33291e-88 Query: 3 K*IGLLQTIPTAAPL*VSKKGYGVSCCT*LPPQLVHKMTVRDPNQTV*LKYRHLLHLFSEVLESNFGKTEEHTRQAHMXFCPRSSMIHKQMHSHQDSPQLEHFACLFQSPSSKXXXXXXXXXXCT*XHSCF*VRK*LLHQKTSK*CHQQ 449 | ||||
Oall_contig35701_v2 | 1.08808e-47 | 95.31% | ||
Oall_contig35701_v2 | ||||
HSP 1 Score: 182.976 bits (393), Expect = 1.08808e-47 Query: 287 DWPTPEGLLHCWWHYLDVFWCSNHFLT*KHECXHVHNINIYXCSKCFDDGDWNKHAKCSNWGES 478 HSP 2 Score: 23.5196 bits (45), Expect = 1.08808e-47 Query: 477 LFYRRLHG 500 HSP 3 Score: 164.19 bits (352), Expect = 4.7801e-41 Query: 271 KCTATKILPN*NILHAYSSHHHQSICYTXKY*YXVHEXTHASR*ENDCCTRKHPNNATSSVVGLQALASP 480 HSP 4 Score: 159.149 bits (341), Expect = 3.60565e-40 Query: 271 TGQRLKAYYTAGGIIWMFSGAAIIFLPRSMSAFMYXISIFIGVANALMMVTGISMQNVLIGENLGGCAF 477 HSP 5 Score: 22.1449 bits (42), Expect = 3.60565e-40 Query: 479 YSTGDCM 499 HSP 6 Score: 155.025 bits (332), Expect = 2.74238e-38 Query: 272 NAQPPRFSPIRTFCMLIPVTIIKAFATPINIDIXYMXALMLLGKKMIAAPENIQIMPPAV**AFRRWPV 478 HSP 7 Score: 138.53 bits (296), Expect = 2.53379e-33 Query: 273 GLANA*RPTTLLVALFGCFLVQQSFSYLEA*VXSCTXYQYLXV*QML**W*LE*ACKMF*LGRILVAVH 479 HSP 8 Score: 134.864 bits (288), Expect = 3.21548e-32 Query: 273 MHSHQDSPQLEHFACLFQSPSSKXXXXXXXXXXCT*XHSCF*VRK*LLHQKTSK*CHQQCSRPSGVGQS 479 | ||||
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Analysis Date: 11-18-2009 (Blast: WO454_contigs_v2_vs_PopulusProt_JamboreeModels1_1)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
eugene3.01480061 | 2.87174e-59 | 68.15% | ||
jgi|Poptr1_1|583307|eugene3.01480061 | ||||
HSP 1 Score: 224.172 bits (570), Expect = 2.87174e-59 Query: 28 ILQEIAWTGQRLKAYYTAGGIIWMFSGAAIIFLPRSMSAFMYXISIFIGVANALMMVTGISMQNVLIGENLGGCAFVCGSLSFLDKISCGLALYVLQSFQSCSPELQRTNAINVYISVTRFGLGLLPSFCALIGVAVTYSMKLHTPFSKPIMEPLLE 498 | ||||
fgenesh4_pg.C_LG_IX001320 | 1.57578e-57 | 66.88% | ||
jgi|Poptr1_1|768269|fgenesh4_pg.C_LG_IX001320 | ||||
HSP 1 Score: 218.394 bits (555), Expect = 1.57578e-57 Query: 28 ILQEIAWTGQRLKAYYTAGGIIWMFSGAAIIFLPRSMSAFMYXISIFIGVANALMMVTGISMQNVLIGENLGGCAFVCGSLSFLDKISCGLALYVLQSFQSCSPELQRTNAINVYISVTRFGLGLLPSFCALIGVAVTYSMKLHTPFSKPIMEPLLE 498 | ||||
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Analysis Date: 11-18-2009 (Blast: WO454_contigs_v2_vs_TAIR7_pep_20070425)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
AT3G60070.1 | 1.07546e-55 | 67.10% | ||
lactose permease-related | chr3:22194554-22196917 REVERSE | ||||
HSP 1 Score: 212.231 bits (539), Expect = 1.07546e-55 Query: 43 ILQEIAWTGQRLKAYYTAGGIIWMFSGAAIIFLPRSMSAFMYXISIFIGVANALMMVTGISMQNVLIGENLGGCAFVCGSLSFLDKISCGLALYVLQSFQSCSPELQ-RTNAINVYISVTRFGLGLLPSFCALIGVAVTYSMKLHT--PFSKPIM 498 | ||||
AT2G44280.2 | 3.1291e-55 | 64.10% | ||
similar to lactose permease-related [Arabidopsis thaliana] (TAIR:AT3G60070.1); similar to Os07g0578200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060093.1); similar to sugar transport protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAC83077.1); contains domain Multidrug resistance ABC transporter MsbA, N-terminal domain (SSF90123) | chr2:18308639-18311003 REVERSE | ||||
HSP 1 Score: 210.69 bits (535), Expect = 3.1291e-55 Query: 31 ILQEIAWTGQRLKAYYTAGGIIWMFSGAAIIFLPRSMSAFMYXISIFIGVANALMMVTGISMQNVLIGENLGGCAFVCGSLSFLDKISCGLALYVLQSFQSCSPELQRTNAINVYISVTRFGLGLLPSFCALIGVAVTYSMKLHTPFSKPIMEPLL 498 | ||||
AT2G44280.1 | 3.1291e-55 | 64.10% | ||
similar to lactose permease-related [Arabidopsis thaliana] (TAIR:AT3G60070.1); similar to Os07g0578200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060093.1); similar to sugar transport protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAC83077.1); contains domain Multidrug resistance ABC transporter MsbA, N-terminal domain (SSF90123) | chr2:18308639-18311003 REVERSE | ||||
HSP 1 Score: 210.69 bits (535), Expect = 3.1291e-55 Query: 31 ILQEIAWTGQRLKAYYTAGGIIWMFSGAAIIFLPRSMSAFMYXISIFIGVANALMMVTGISMQNVLIGENLGGCAFVCGSLSFLDKISCGLALYVLQSFQSCSPELQRTNAINVYISVTRFGLGLLPSFCALIGVAVTYSMKLHTPFSKPIMEPLL 498 | ||||
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