WO454_contig1597_v2
| Name | WO454_contig1597_v2 |
|---|---|
| Accession | ID3269075 |
| Sequence | GTTCCCATGGAACGCTTGTCATGGTGGGTATACCGGACAAGCCACTAGAG |
| Length | 459 |
| Type | contig |
| Organism | White Oak |
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References
| Dababase | Accession |
|---|---|
| GFF_source | SeqManPro |
ESTs in this contig
| Type | Feature | Position |
|---|---|---|
| EST | WOA_108147_0576_2709 | 0-245 |
| EST | WOA_094030_0418_2032 | 154-421 |
| EST | WOA_125843_0826_3197 | 155-420 |
| EST | WOA_118545_0699_2428 | 208-459 |
GO terms assigned to this feature
| Accession | Category | Term |
|---|---|---|
| GO:0008152 | biological_process | metabolic process |
| GO:0055114 | biological_process | oxidation reduction |
| GO:0005488 | molecular_function | binding |
| GO:0003824 | molecular_function | catalytic activity |
| GO:0016491 | molecular_function | oxidoreductase activity |
| GO:0008270 | molecular_function | zinc ion binding |
InterProScan Analysis
Analysis Date: 11-18-2009
(Interpro: WO454_contigs_v2)
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Blast Hits to Uniprot
Analysis Date: 11-18-2009 (Blast: WO454_v2_uniprot)
Best 10 Hits Shown | Show Best 25 Hits | Show All Hits
Note: Click a description for more details.
Best 10 Hits Shown | Show Best 25 Hits | Show All Hits
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
Q94G59_POPTM | 2.03602e-39 | 84.95% | ||
Sinapyl alcohol dehydrogenase OS=Populus tremuloides PE=1 SV=1 | ||||
HSP 1 Score: 164.851 bits (416), Expect = 2.03602e-39 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTLAATKP 281 | ||||
Q5I6D6_9ROSI | 2.03602e-39 | 84.95% | ||
Sinapyl alcohol dehydrogenase-like protein OS=Populus tremula x Populus tremuloides GN=SAD1 PE=2 SV=1 | ||||
HSP 1 Score: 164.851 bits (416), Expect = 2.03602e-39 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTLAATKP 281 | ||||
B9IIT8_POPTR | 2.03602e-39 | 84.95% | ||
Sinapyl alcohol dehydrogenase OS=Populus trichocarpa GN=SAD PE=3 SV=1 | ||||
HSP 1 Score: 164.851 bits (416), Expect = 2.03602e-39 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTLAATKP 281 | ||||
B2Z6P7_POPTR | 3.47292e-39 | 84.95% | ||
Cinnamyl alcohol dehydrogenase OS=Populus trichocarpa PE=2 SV=1 | ||||
HSP 1 Score: 164.081 bits (414), Expect = 3.47292e-39 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTLAATKP 281 | ||||
Q9ATW1_FRAAN | 1.61323e-36 | 83.52% | ||
Cinnamyl alcohol dehydrogenase OS=Fragaria ananassa PE=3 SV=1 | ||||
HSP 1 Score: 155.221 bits (391), Expect = 1.61323e-36 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTLAAT 275 | ||||
A7R300_VITVI | 1.61323e-36 | 79.57% | ||
Chromosome undetermined scaffold_469, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00013365001 PE=3 SV=1 | ||||
HSP 1 Score: 155.221 bits (391), Expect = 1.61323e-36 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTLAATKP 281 | ||||
A7R0K8_VITVI | 1.61323e-36 | 79.57% | ||
Chromosome undetermined scaffold_311, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00011484001 PE=3 SV=1 | ||||
HSP 1 Score: 155.221 bits (391), Expect = 1.61323e-36 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTLAATKP 281 | ||||
MTDH_FRAAN | 2.10695e-36 | 85.23% | ||
Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1 | ||||
HSP 1 Score: 154.836 bits (390), Expect = 2.10695e-36 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTL 266 | ||||
Q3SA41_FAGSY | 2.75176e-36 | 93.83% | ||
Putative sinapyl alcohol dehydrogenase (Fragment) OS=Fagus sylvatica PE=2 SV=1 | ||||
HSP 1 Score: 154.451 bits (389), Expect = 2.75176e-36 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFV 245 | ||||
A7R0V8_VITVI | 8.0064e-36 | 82.22% | ||
Chromosome undetermined scaffold_324, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00011638001 PE=3 SV=1 | ||||
HSP 1 Score: 152.91 bits (385), Expect = 8.0064e-36 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTLAA 272 | ||||
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Blast Hits to Contigs V2 AB454
Analysis Date: 11-18-2009 (Blast: WO454_contigs_v2_vs_AB454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
AB454_contig7613_v2 | 1.65502e-38 | 68.67% | ||
AB454_contig7613_v2 | ||||
HSP 1 Score: 152.734 bits (327), Expect = 1.65502e-38 Query: 6 HGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDI 254 HSP 2 Score: 73.0061 bits (153), Expect = 1.65732e-14 Query: 71 SMTNLYLTSFLARRSIAVFT*SIETTSMSAVMPCFAAKSIISCVSFIPPMPLPATIFLPE 250 HSP 3 Score: 67.0494 bits (140), Expect = 1.02933e-12 Query: 8 WNACHGGYTGQATRATCVSVDFGKEDGCREWHWRNERDARDD*LCSKTWHHGRH*GCFNGLCEHRNGASC*E*C*IQVCH 247 HSP 4 Score: 62.0091 bits (129), Expect = 3.38716e-11 Query: 15 NVNDKPVSNIILSKTLHCGVHIIH*NNLNVCRDAMFCCKVNHLLRLFHSSNATPGNHLPSRNQRKHR*L*WLVRYTHHDK 254 | ||||
AB454_contig3618_v2 | 1.41249e-32 | 80.60% | ||
AB454_contig3618_v2 | ||||
HSP 1 Score: 133.031 bits (284), Expect = 1.41249e-32 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTA 203 HSP 2 Score: 80.3374 bits (169), Expect = 1.02909e-16 Query: 74 TNLYLTSFLARRSIAVFT*SIETTSMSAVMPCFAAKSIISCVSFIPPMPLPATIFLP 244 HSP 3 Score: 73.9225 bits (155), Expect = 8.78089e-15 Query: 6 VHIIH*NNLNVCRDAMFCCKVNHLLRLFHSSNATPGNHLPSRNQRKHR*L*WLVRYTHHDKRSM 197 HSP 4 Score: 69.3404 bits (145), Expect = 2.10322e-13 Query: 8 WNACHGGYTGQATRATCVSVDFGKEDGCREWHWRNERDARDD*LCSKTWHHGRH*GCFNGLCEH 199 | ||||
AB454_contig1019_v2 | 8.10922e-18 | 56.25% | ||
AB454_contig1019_v2 | ||||
HSP 1 Score: 84.0031 bits (177), Expect = 8.10922e-18 Query: 75 GRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTL 266 HSP 2 Score: 60.6344 bits (126), Expect = 8.78293e-11 Query: 74 KVFPMSMTNLYLTSFLARRSIAVFT*SIETTSMSAVMPCFAAKSIISCVSFIPPMPLPATIFLP 265 | ||||
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Blast Hits to Contigs V2 ABall
Analysis Date: 11-18-2009 (Blast: WO454_contigs_v2_vs_ABall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
ABall_contig7723_v2 | 1.68661e-38 | 68.67% | ||
ABall_contig7723_v2 | ||||
HSP 1 Score: 152.734 bits (327), Expect = 1.68661e-38 Query: 6 HGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDI 254 HSP 2 Score: 73.0061 bits (153), Expect = 1.68896e-14 Query: 71 SMTNLYLTSFLARRSIAVFT*SIETTSMSAVMPCFAAKSIISCVSFIPPMPLPATIFLPE 250 HSP 3 Score: 67.0494 bits (140), Expect = 1.04898e-12 Query: 8 WNACHGGYTGQATRATCVSVDFGKEDGCREWHWRNERDARDD*LCSKTWHHGRH*GCFNGLCEHRNGASC*E*C*IQVCH 247 HSP 4 Score: 62.0091 bits (129), Expect = 3.45182e-11 Query: 15 NVNDKPVSNIILSKTLHCGVHIIH*NNLNVCRDAMFCCKVNHLLRLFHSSNATPGNHLPSRNQRKHR*L*WLVRYTHHDK 254 | ||||
ABall_contig3695_v2 | 1.43946e-32 | 80.60% | ||
ABall_contig3695_v2 | ||||
HSP 1 Score: 133.031 bits (284), Expect = 1.43946e-32 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTA 203 HSP 2 Score: 80.3374 bits (169), Expect = 1.04874e-16 Query: 74 TNLYLTSFLARRSIAVFT*SIETTSMSAVMPCFAAKSIISCVSFIPPMPLPATIFLP 244 HSP 3 Score: 73.9225 bits (155), Expect = 8.94852e-15 Query: 6 VHIIH*NNLNVCRDAMFCCKVNHLLRLFHSSNATPGNHLPSRNQRKHR*L*WLVRYTHHDKRSM 197 HSP 4 Score: 69.3404 bits (145), Expect = 2.14337e-13 Query: 8 WNACHGGYTGQATRATCVSVDFGKEDGCREWHWRNERDARDD*LCSKTWHHGRH*GCFNGLCEH 199 | ||||
ABall_contig1208_v2 | 8.26403e-18 | 56.25% | ||
ABall_contig1208_v2 | ||||
HSP 1 Score: 84.0031 bits (177), Expect = 8.26403e-18 Query: 75 GRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTL 266 HSP 2 Score: 60.6344 bits (126), Expect = 8.9506e-11 Query: 74 KVFPMSMTNLYLTSFLARRSIAVFT*SIETTSMSAVMPCFAAKSIISCVSFIPPMPLPATIFLP 265 | ||||
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Blast Hits to Contigs V2 AC454
Analysis Date: 11-18-2009 (Blast: WO454_contigs_v2_vs_AC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
AC454_contig23920_v2 | 3.91779e-45 | 90.57% | ||
AC454_contig23920_v2 | ||||
HSP 1 Score: 121.118 bits (258), Expect = 3.91779e-45 Query: 190 TKKTMEHWNNKRKLIKTQSYFFKAW*QPRCFQCQ*QTCI*HHS*QDAPLRCSH 348 HSP 2 Score: 52.8449 bits (109), Expect = 3.91779e-45 Query: 385 IHIYYFIYYTLYESLKDRLMVET 453 HSP 3 Score: 40.0151 bits (81), Expect = 3.91779e-45 Query: 341 EGQAYGRDPAKHNKFNTTPSNQK 409 HSP 4 Score: 116.536 bits (248), Expect = 4.1305e-43 Query: 189 YVNTAMERLAKNDVRYRFVIDIGNTLAATKP*RNSFVS*LIFFYCSNVPWFF 344 HSP 5 Score: 48.721 bits (100), Expect = 4.1305e-43 Query: 387 SLP*ACPSNFHIMCNK*NNIYG 452 HSP 6 Score: 41.8479 bits (85), Expect = 4.1305e-43 Query: 340 FFGWMGWY*IYYVLL 384 HSP 7 Score: 160.982 bits (345), Expect = 2.59754e-40 Query: 188 LCEHRNGASC*E*C*IQVCH*HWKHLGCYQALKK*LCVLINFLLLFQCSMVFLVGWGGIEFIMFCWVSTISLSFKLSYNV**IK*YIWI 454 HSP 8 Score: 151.36 bits (324), Expect = 2.04732e-37 Query: 190 M*TPQWSVLLRMMLDTGLSLTLETPWLLPSLEEIALCLN*FSFIVPMFHGFFGWMGWY*IYYVLLGLYHKPVLQTFI*CVINKIIYMDKF 459 HSP 9 Score: 149.985 bits (321), Expect = 5.35612e-37 Query: 189 SIYIILFITHYMKV*RTGLW*RPSKT**IQYHPIQPKKPWNIGTIKEN*LRHKAISSRLGSSQGVSNVNDKPVSNIILSKTLHCGVHI 452 HSP 10 Score: 148.152 bits (317), Expect = 1.90805e-36 Query: 188 YPYILFYLLHII*KFEGQAYGRDPAKHNKFNTTPSNQKNHGTLEQ*KKIN*DTKLFLQGLVAAKVFPMSMTNLYLTSFLARRSIAVFT* 454 | ||||
AC454_contig28757_v2 | 8.54556e-43 | 80.46% | ||
AC454_contig28757_v2 | ||||
HSP 1 Score: 169.23 bits (363), Expect = 8.54556e-43 Query: 6 HGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTL 266 HSP 2 Score: 99.5822 bits (211), Expect = 7.90291e-22 Query: 74 VFPMSMTNLYLTSFLARRSIAVFT*SIETTSMSAVMPCFAAKSIISCVSFIPPMPLPATIFLP 262 HSP 3 Score: 86.2941 bits (182), Expect = 7.90474e-18 Query: 6 KAISSRLGSSQGVSNVNDKPVSNIILSKTLHCGVHIIH*NNLNVCRDAMFCCKVNHLLRLFHSSNATPGNHLPSRNQRKHR*L*WLVRYTHHDKRSM 296 HSP 4 Score: 69.7986 bits (146), Expect = 7.30349e-13 Query: 10 ERLSWWVYRTSH*SYLCFR*FREGRWLPGVALEE*KRRKR*LTLQQNMASRQTLRLFQWIM*TPQWSVLLRMMLDTGLSLTLET 261 HSP 5 Score: 67.0494 bits (140), Expect = 4.91063e-12 Query: 101 HWRNERDARDD*LCSKTWHHGRH*GCFNGLCEHRNGASC*E*C*IQVCH*HWKHL 265 | ||||
AC454_contig14334_v2 | 1.17402e-42 | 78.02% | ||
AC454_contig14334_v2 | ||||
HSP 1 Score: 168.772 bits (362), Expect = 1.17402e-42 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTLAAT 275 HSP 2 Score: 102.331 bits (217), Expect = 1.17538e-22 Query: 74 VFPMSMTNLYLTSFLARRSIAVFT*SIETTSMSAVMPCFAAKSIISCVSFIPPMPLPATIFLP 262 HSP 3 Score: 93.1672 bits (197), Expect = 6.74326e-20 Query: 6 QGVSNVNDKPVSNIILSKTLHCGVHIIH*NNLNVCRDAMFCCKVNHLLRLFHSSNATPGNHLPSRNQRKHR*L*WLVRYTHHDKRSM 266 HSP 4 Score: 84.4613 bits (178), Expect = 2.81596e-17 Query: 17 CHGGYTGQATRATCVSVDFGKEDGCREWHWRNERDARDD*LCSKTWHHGRH*GCFNGLCEHRNGASC*E*C*IQVCH*HWKHL 265 HSP 5 Score: 77.13 bits (162), Expect = 4.53501e-15 Query: 10 ERLSWWVYRTSH*SYLCFR*FREGRWLPGVALEE*KRRKR*LTLQQNMASRQTLRLFQWIM*TPQWSVLLRMMLDTGLSLTLET 261 | ||||
AC454_contig29730_v2 | 1.38885e-36 | 87.10% | ||
AC454_contig29730_v2 | ||||
HSP 1 Score: 148.61 bits (318), Expect = 1.38885e-36 Query: 5 PWNACHGGYTGQATRATCVSVDFGKEDGCREWHWRNERDARDD*LCSKTWHHGRH*GCFNGL 190 HSP 2 Score: 146.319 bits (313), Expect = 6.79715e-36 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDY 191 HSP 3 Score: 136.697 bits (292), Expect = 5.35737e-33 Query: 4 PMERLSWWVYRTSH*SYLCFR*FREGRWLPGVALEE*KRRKR*LTLQQNMASRQTLRLFQWIM 192 HSP 4 Score: 135.322 bits (289), Expect = 1.37688e-32 Query: 3 IIH*NNLNVCRDAMFCCKVNHLLRLFHSSNATPGNHLPSRNQRKHR*L*WLVRYTHHDKRSMG 191 HSP 5 Score: 110.579 bits (235), Expect = 3.86686e-25 Query: 2 *SIETTSMSAVMPCFAAKSIISCVSFIPPMPLPATIFLPEIXXXXXXXXXXXGIPTMTSVPWE 190 HSP 6 Score: 95.0001 bits (201), Expect = 1.89292e-20 Query: 4 HNPLKQPQCLP*CHVXXXXXXXXXXXXXXQCHSRQPSSFPKSTETQVALVACPVYPP*QAFHG 192 | ||||
AC454_contig19786_v2 | 1.17511e-26 | 71.88% | ||
AC454_contig19786_v2 | ||||
HSP 1 Score: 115.619 bits (246), Expect = 1.17511e-26 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYV 194 HSP 2 Score: 74.8389 bits (157), Expect = 2.21948e-14 Query: 8 FT*SIETTSMSAVMPCFAAKSIISCVSFIPPMPLPATIFLPEIXXXXXXXXXXXGIPTMTSVP 196 HSP 3 Score: 70.2568 bits (147), Expect = 5.31613e-13 Query: 6 HIIH*NNLNVCRDAMFCCKVNHLLRLFHSSNATPGNHLPSRNQRKHR*L*WLVRYTHHDKRSM 194 | ||||
AC454_contig28918_v2 | 1.74813e-23 | 47.06% | ||
AC454_contig28918_v2 | ||||
HSP 1 Score: 105.081 bits (223), Expect = 1.74813e-23 Query: 9 GTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNT 263 | ||||
AC454_contig15580_v2 | 7.30009e-21 | 64.29% | ||
AC454_contig15580_v2 | ||||
HSP 1 Score: 96.3747 bits (204), Expect = 7.30009e-21 Query: 102 IGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTLA 269 | ||||
AC454_contig2566_v2 | 3.04849e-18 | 59.38% | ||
AC454_contig2566_v2 | ||||
HSP 1 Score: 87.6687 bits (185), Expect = 3.04849e-18 Query: 75 GRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTL 266 | ||||
AC454_contig21163_v2 | 8.55948e-15 | 53.70% | ||
AC454_contig21163_v2 | ||||
HSP 1 Score: 76.2135 bits (160), Expect = 8.55948e-15 Query: 102 IGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNT 263 | ||||
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Blast Hits to Contigs V2 CC454
Analysis Date: 11-18-2009 (Blast: WO454_contigs_v2_vs_CC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
CC454_contig48005_v2 | 2.38118e-39 | 71.43% | ||
CC454_contig48005_v2 | ||||
HSP 1 Score: 158.691 bits (340), Expect = 2.38118e-39 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTLAAT 275 HSP 2 Score: 95.4583 bits (202), Expect = 2.5808e-20 Query: 74 VFPMSMTNLYLTSFLARRSIAVFT*SIETTSMSAVMPCFAAKSIISCVSFIPPMPLPATIFLP 262 HSP 3 Score: 80.7956 bits (170), Expect = 6.69359e-16 Query: 32 TGQATRATCVSVDFGKEDGCREWHWRNERDARDD*LCSKTWHHGRH*GCFNGLCEHRNGASC*E*C*IQVCH*HWKHL 265 HSP 4 Score: 76.6717 bits (161), Expect = 1.167e-14 Query: 75 QGVSNVNDKPVSNIILSKTLHCGVHIIH*NNLNVCRDAMFCCKVNHLLRLFHSSNATPGNHLPS 266 HSP 5 Score: 68.424 bits (143), Expect = 3.54725e-12 Query: 28 VYRTSH*SYLCFR*FREGRWLPGVALEE*KRRKR*LTLQQNMASRQTLRLFQWIM*TPQWSVLLRMMLDTGLSLTLET 261 | ||||
CC454_contig15297_v2 | 2.19955e-38 | 73.03% | ||
CC454_contig15297_v2 | ||||
HSP 1 Score: 155.484 bits (333), Expect = 2.19955e-38 Query: 9 GTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTLAAT 275 HSP 2 Score: 106.914 bits (227), Expect = 9.19162e-24 Query: 8 LVAAKVFPMSMTNLYLTSFLARRSIAVFT*SIETTSMSAVMPCFAAKSIISCVSFIPPMPLPATIFLPEIXXXXXXXXXXXGIPTMTSVP 277 HSP 3 Score: 95.4583 bits (202), Expect = 2.5808e-20 Query: 15 QGVSNVNDKPVSNIILSKTLHCGVHIIH*NNLNVCRDAMFCCKVNHLLRLFHSSNATPGNHLPSRNQRKHR*L*WLVRYTHHDK 266 HSP 4 Score: 80.7956 bits (170), Expect = 6.69359e-16 Query: 14 ACHGGYTGQATRATCVSVDFGKEDGCREWHWRNERDARDD*LCSKTWHHGRH*GCFNGLCEHRNGASC*E*C*IQVCH*HWKHLGCYQAL 283 | ||||
CC454_contig415_v2 | 3.27439e-23 | 47.06% | ||
CC454_contig415_v2 | ||||
HSP 1 Score: 105.081 bits (223), Expect = 3.27439e-23 Query: 9 GTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNT 263 HSP 2 Score: 63.8419 bits (133), Expect = 8.49643e-11 Query: 68 SMTNLYLTSFLARRSIAVFT*SIETTSMSAVMPCFAAKSIISCVSFIPPMPLPATIFLPEI 250 | ||||
CC454_contig27995_v2 | 1.16673e-18 | 59.38% | ||
CC454_contig27995_v2 | ||||
HSP 1 Score: 89.9598 bits (190), Expect = 1.16673e-18 Query: 75 GRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTL 266 | ||||
CC454_contig18241_v2 | 5.71007e-18 | 59.38% | ||
CC454_contig18241_v2 | ||||
HSP 1 Score: 87.6687 bits (185), Expect = 5.71007e-18 Query: 75 GRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTL 266 | ||||
CC454_contig14535_v2 | 5.27452e-17 | 64.00% | ||
CC454_contig14535_v2 | ||||
HSP 1 Score: 84.4613 bits (178), Expect = 5.27452e-17 Query: 120 TQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTLA 269 | ||||
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Blast Hits to Contigs V2 CCall
Analysis Date: 11-18-2009 (Blast: WO454_contigs_v2_vs_CCall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
CCall_contig4088_v2 | 3.42735e-39 | 74.16% | ||
CCall_contig4088_v2 | ||||
HSP 1 Score: 158.233 bits (339), Expect = 3.42735e-39 Query: 9 GTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTLAAT 275 HSP 2 Score: 105.539 bits (224), Expect = 2.47455e-23 Query: 8 LVAAKVFPMSMTNLYLTSFLARRSIAVFT*SIETTSMSAVMPCFAAKSIISCVSFIPPMPLPATIFLPEIXXXXXXXXXXXGIPTMTSVP 277 HSP 3 Score: 97.7493 bits (207), Expect = 5.475e-21 Query: 15 QGVSNVNDKPVSNIILSKTLHCGVHIIH*NNLNVCRDAMFCCKVNHLLRLFHSSNATPGNHLPSRNQRKHR*L*WLVRYTHHDK 266 HSP 4 Score: 82.6285 bits (174), Expect = 1.96858e-16 Query: 20 HGGYTGQATRATCVSVDFGKEDGCREWHWRNERDARDD*LCSKTWHHGRH*GCFNGLCEHRNGASC*E*C*IQVCH*HWKHL 265 HSP 5 Score: 67.9658 bits (142), Expect = 5.10573e-12 Query: 22 WWVYRTSH*SYLCFR*FREGRWLPGVALEE*KRRKR*LTLQQNMASRQTLRLFQWIM*TPQWSVLLRMMLDTGLSLTLET 261 | ||||
CCall_contig474_v2 | 3.39963e-23 | 47.06% | ||
CCall_contig474_v2 | ||||
HSP 1 Score: 105.081 bits (223), Expect = 3.39963e-23 Query: 9 GTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNT 263 HSP 2 Score: 63.8419 bits (133), Expect = 8.82141e-11 Query: 68 SMTNLYLTSFLARRSIAVFT*SIETTSMSAVMPCFAAKSIISCVSFIPPMPLPATIFLPEI 250 | ||||
CCall_contig33735_v2 | 1.66381e-22 | 68.33% | ||
CCall_contig33735_v2 | ||||
HSP 1 Score: 102.79 bits (218), Expect = 1.66381e-22 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVS 182 | ||||
CCall_contig17590_v2 | 1.21135e-18 | 59.38% | ||
CCall_contig17590_v2 | ||||
HSP 1 Score: 89.9598 bits (190), Expect = 1.21135e-18 Query: 75 GRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTL 266 | ||||
CCall_contig6027_v2 | 5.92848e-18 | 59.38% | ||
CCall_contig6027_v2 | ||||
HSP 1 Score: 87.6687 bits (185), Expect = 5.92848e-18 Query: 75 GRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTL 266 | ||||
CCall_contig14422_v2 | 5.47627e-17 | 64.00% | ||
CCall_contig14422_v2 | ||||
HSP 1 Score: 84.4613 bits (178), Expect = 5.47627e-17 Query: 120 TQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTLA 269 | ||||
CCall_contig32369_v2 | 2.47628e-11 | 62.50% | ||
CCall_contig32369_v2 | ||||
HSP 1 Score: 65.6747 bits (137), Expect = 2.47628e-11 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKET 122 | ||||
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Blast Hits to MedicagoProt
Analysis Date: 11-18-2009 (Blast: WO454_contigs_v2_vs_MedicagoProt_20080227)
Best 10 Hits Shown | Show Best 25 Hits
Note: Click a description for more details.
Best 10 Hits Shown | Show Best 25 Hits
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
IMGA|CR931741_6.4 Alcohol dehydrogena | 5.52162e-36 | 78.41% | ||
e superfamily, zinc-containing chr05_pseudomolecule_IMGAG_V2 12277808-12279373 H EGN_Mt071002 20080227 | ||||
HSP 1 Score: 145.976 bits (367), Expect = 5.52162e-36 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTL 266 | ||||
IMGA|CR931741_28.4 Alcohol dehydrogena | 1.60655e-35 | 77.27% | ||
e superfamily, zinc-containing chr05_pseudomolecule_IMGAG_V2 12273969-12275585 E EGN_Mt071002 20080227 | ||||
HSP 1 Score: 144.436 bits (363), Expect = 1.60655e-35 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTL 266 | ||||
IMGA|CR931741_15.4 Alcohol dehydrogena | 3.57901e-35 | 74.73% | ||
e superfamily, zinc-containing chr05_pseudomolecule_IMGAG_V2 12344462-12342420 E EGN_Mt071002 20080227 | ||||
HSP 1 Score: 143.28 bits (360), Expect = 3.57901e-35 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTLAAT 275 | ||||
IMGA|CR931741_34.4 GroES-like chr05_p | 4.67433e-35 | 77.27% | ||
eudomolecule_IMGAG_V2 12296540-12301096 H EGN_Mt071002 20080227 | ||||
HSP 1 Score: 142.895 bits (359), Expect = 4.67433e-35 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTL 266 | ||||
IMGA|AC153121_21.4 Alcohol dehydrogena | 1.36002e-34 | 78.41% | ||
e superfamily, zinc-containing chr08_pseudomolecule_IMGAG_V2 26708208-26706074 E EGN_Mt071002 20080227 | ||||
HSP 1 Score: 141.354 bits (355), Expect = 1.36002e-34 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTL 266 | ||||
IMGA|AC174360_15.5 Alcohol dehydrogena | 1.77624e-34 | 74.73% | ||
e superfamily, zinc-containing chr08_pseudomolecule_IMGAG_V2 15057634-15060684 E EGN_Mt071002 20080227 | ||||
HSP 1 Score: 140.969 bits (354), Expect = 1.77624e-34 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTLAAT 275 | ||||
IMGA|CR931741_22.4 Alcohol dehydrogena | 6.74972e-34 | 74.73% | ||
e superfamily, zinc-containing chr05_pseudomolecule_IMGAG_V2 12269506-12267551 H EGN_Mt071002 20080227 | ||||
HSP 1 Score: 139.043 bits (349), Expect = 6.74972e-34 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTLAAT 275 | ||||
IMGA|CR931741_20.4 Alcohol dehydrogena | 1.15133e-33 | 77.01% | ||
e superfamily, zinc-containing chr05_pseudomolecule_IMGAG_V2 12282159-12284213 F EGN_Mt071002 20080227 | ||||
HSP 1 Score: 138.272 bits (347), Expect = 1.15133e-33 Query: 6 HGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTL 266 | ||||
IMGA|CR931741_16.4 Alcohol dehydrogena | 4.37504e-33 | 71.43% | ||
e superfamily, zinc-containing chr05_pseudomolecule_IMGAG_V2 12263074-12261813 H EGN_Mt071002 20080227 | ||||
HSP 1 Score: 136.346 bits (342), Expect = 4.37504e-33 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTLAAT 275 | ||||
IMGA|CR931741_8.4 Alcohol dehydrogena | 2.17131e-32 | 77.27% | ||
e superfamily, zinc-containing chr05_pseudomolecule_IMGAG_V2 12316679-12314724 F EGN_Mt071002 20080227 | ||||
HSP 1 Score: 134.035 bits (336), Expect = 2.17131e-32 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTL 266 | ||||
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Blast Hits to Contig V2 Oall
Analysis Date: 11-18-2009 (Blast: WO454_contigs_v2_vs_Oall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
Oall_contig16058_v2 | 2.25815e-109 | 100.00% | ||
Oall_contig16058_v2 | ||||
HSP 1 Score: 391.003 bits (847), Expect = 2.25815e-109 Query: 2 FPWNACHGGYTGQATRATCVSVDFGKEDGCREWHWRNERDARDD*LCSKTWHHGRH*GCFNGLCEHRNGASC*E*C*IQVCH*HWKHLGCYQALKK*LCVLINFLLLFQCSMVFLVGWGGIEFIMFCWVSTISLSFKLSYNV**IK*YIWIS 457 HSP 2 Score: 370.383 bits (802), Expect = 3.63753e-103 Query: 1 VPMERLSWWVYRTSH*SYLCFR*FREGRWLPGVALEE*KRRKR*LTLQQNMASRQTLRLFQWIM*TPQWSVLLRMMLDTGLSLTLETPWLLPSLEEIALCLN*FSFIVPMFHGFFGWMGWY*IYYVLLGLYHKPVLQTFI*CVINKIIYMDKF 459 HSP 3 Score: 367.176 bits (795), Expect = 3.36007e-102 Query: 3 NLSIYIILFITHYMKV*RTGLW*RPSKT**IQYHPIQPKKPWNIGTIKEN*LRHKAISSRLGSSQGVSNVNDKPVSNIILSKTLHCGVHIIH*NNLNVCRDAMFCCKVNHLLRLFHSSNATPGNHLPSRNQRKHR*L*WLVRYTHHDKRSMG 458 HSP 4 Score: 362.136 bits (784), Expect = 1.10568e-100 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTLAATKP*RNSFVS*LIFFYCSNVPWFFWLDGVVLNLLCFAGSLP*ACPSNFHIMCNK*NNIYG*V 458 HSP 5 Score: 342.433 bits (741), Expect = 9.43653e-95 Query: 1 KLIHIYYFIYYTLYESLKDRLMVETQQNIINSIPPHPTKKTMEHWNNKRKLIKTQSYFFKAW*QPRCFQCQ*QTCI*HHS*QDAPLRCSHNPLKQPQCLP*CHVXXXXXXXXXXXXXXQCHSRQPSSFPKSTETQVALVACPVYPP*QAFHGN 459 HSP 6 Score: 323.646 bits (700), Expect = 4.26705e-89 Query: 2 TYPYILFYLLHII*KFEGQAYGRDPAKHNKFNTTPSNQKNHGTLEQ*KKIN*DTKLFLQGLVAAKVFPMSMTNLYLTSFLARRSIAVFT*SIETTSMSAVMPCFAAKSIISCVSFIPPMPLPATIFLPEIXXXXXXXXXXXGIPTMTSVPWE 457 | ||||
Oall_contig4423_v2 | 5.87722e-45 | 78.02% | ||
Oall_contig4423_v2 | ||||
HSP 1 Score: 177.019 bits (380), Expect = 5.87722e-45 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTLAAT 275 HSP 2 Score: 111.037 bits (236), Expect = 4.24436e-25 Query: 8 VFPMSMTNLYLTSFLARRSIAVFT*SIETTSMSAVMPCFAAKSIISCVSFIPPMPLPATIFLPEIXXXXXXXXXXXGIPTMTSVP 262 HSP 3 Score: 99.5822 bits (211), Expect = 1.20256e-21 Query: 8 WNACHGGYTGQATRATCVSVDFGKEDGCREWHWRNERDARDD*LCSKTWHHGRH*GCFNGLCEHRNGASC*E*C*IQVCH*HWKHL 265 HSP 4 Score: 95.4583 bits (202), Expect = 2.07771e-20 Query: 6 QGVSNVNDKPVSNIILSKTLHCGVHIIH*NNLNVCRDAMFCCKVNHLLRLFHSSNATPGNHLPSRNQRKHR*L*WLVRYTHHDKRSM 266 HSP 5 Score: 66.1329 bits (138), Expect = 1.41034e-11 Query: 22 WWVYRTSH*SYLCFR*FREGRWLPGVALEE*KRRKR*LTLQQNMASRQTLRLFQWIM*TPQWSVLLRMMLDTGLSLTLET 261 | ||||
Oall_contig15357_v2 | 3.3718e-42 | 78.02% | ||
Oall_contig15357_v2 | ||||
HSP 1 Score: 167.855 bits (360), Expect = 3.3718e-42 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTLAAT 275 HSP 2 Score: 101.415 bits (215), Expect = 3.34531e-22 Query: 74 VFPMSMTNLYLTSFLARRSIAVFT*SIETTSMSAVMPCFAAKSIISCVSFIPPMPLPATIFLP 262 HSP 3 Score: 83.5449 bits (176), Expect = 8.01462e-17 Query: 6 QGVSNVNDKPVSNIILSKTLHCGVHIIH*NNLNVCRDAMFCCKVNHLLRLFHSSNATPGNHLPSRNQRKHR*L*WLVRYTHHDKRSM 266 HSP 4 Score: 77.5882 bits (163), Expect = 5.02298e-15 Query: 14 ACHGGYTGQATRATCVSVDFGKEDGCREWHWRNERDARDD*LCSKTWHHGRH*GCFNGLCEHRNGASC*E*C*IQVCH*HWKHL 265 HSP 5 Score: 65.6747 bits (137), Expect = 1.93758e-11 Query: 22 WWVYRTSH*SYLCFR*FREGRWLPGVALEE*KRRKR*LTLQQNMASRQTLRLFQWIM*TPQWSVLLRMMLDTGLSLTLET 261 | ||||
Oall_contig34885_v2 | 2.63364e-39 | 68.18% | ||
Oall_contig34885_v2 | ||||
HSP 1 Score: 158.233 bits (339), Expect = 2.63364e-39 Query: 6 HGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTLA 269 HSP 2 Score: 75.2971 bits (158), Expect = 2.43615e-14 Query: 71 KVFPMSMTNLYLTSFLARRSIAVFT*SIETTSMSAVMPCFAAKSIISCVSFIPPMPLPATIFLPE 265 HSP 3 Score: 74.8389 bits (157), Expect = 3.34687e-14 Query: 15 QGVSNVNDKPVSNIILSKTLHCGVHIIH*NNLNVCRDAMFCCKVNHLLRLFHSSNATPGNHLPSRNQRKHR*L*WLVRYTHHDK 266 | ||||
Oall_contig12822_v2 | 9.39072e-23 | 45.88% | ||
Oall_contig12822_v2 | ||||
HSP 1 Score: 103.248 bits (219), Expect = 9.39072e-23 Query: 9 GTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNT 263 | ||||
Oall_contig9652_v2 | 7.40156e-20 | 55.56% | ||
Oall_contig9652_v2 | ||||
HSP 1 Score: 93.6255 bits (198), Expect = 7.40156e-20 Query: 75 GRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNT 263 | ||||
Oall_contig17526_v2 | 2.0782e-16 | 56.25% | ||
Oall_contig17526_v2 | ||||
HSP 1 Score: 82.1702 bits (173), Expect = 2.0782e-16 Query: 75 GRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTL 266 | ||||
Oall_contig37069_v2 | 2.67889e-13 | 62.16% | ||
Oall_contig37069_v2 | ||||
HSP 1 Score: 53.3031 bits (110), Expect = 2.67889e-13 Query: 156 ITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTL 266 HSP 2 Score: 37.2658 bits (75), Expect = 2.67889e-13 Query: 75 GRKMVAGSGIGGMKETQEMIDFAAKH 152 | ||||
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Analysis Date: 11-18-2009 (Blast: WO454_contigs_v2_vs_PopulusProt_JamboreeModels1_1)
Best 10 Hits Shown | Show Best 25 Hits
Note: Click a description for more details.
Best 10 Hits Shown | Show Best 25 Hits
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
grail3.0004034803 | 1.74235e-41 | 84.95% | ||
jgi|Poptr1_1|667694|grail3.0004034803 | ||||
HSP 1 Score: 164.851 bits (416), Expect = 1.74235e-41 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTLAATKP 281 | ||||
fgenesh4_pm.C_LG_IX000475 | 2.87862e-36 | 81.82% | ||
jgi|Poptr1_1|804428|fgenesh4_pm.C_LG_IX000475 | ||||
HSP 1 Score: 147.517 bits (371), Expect = 2.87862e-36 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTL 266 | ||||
eugene3.20690001 | 2.87862e-36 | 81.82% | ||
jgi|Poptr1_1|587092|eugene3.20690001 | ||||
HSP 1 Score: 147.517 bits (371), Expect = 2.87862e-36 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTL 266 | ||||
fgenesh4_pg.C_LG_IX000970 | 3.7596e-36 | 81.82% | ||
jgi|Poptr1_1|767919|fgenesh4_pg.C_LG_IX000970 | ||||
HSP 1 Score: 147.132 bits (370), Expect = 3.7596e-36 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTL 266 | ||||
estExt_fgenesh4_pm.C_LG_VI0462 | 1.09388e-35 | 79.55% | ||
jgi|Poptr1_1|831981|estExt_fgenesh4_pm.C_LG_VI0462 | ||||
HSP 1 Score: 145.591 bits (366), Expect = 1.09388e-35 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTL 266 | ||||
estExt_Genewise1_v1.C_LG_XVI2049 | 1.09388e-35 | 79.55% | ||
jgi|Poptr1_1|735178|estExt_Genewise1_v1.C_LG_XVI2049 | ||||
HSP 1 Score: 145.591 bits (366), Expect = 1.09388e-35 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTL 266 | ||||
eugene3.00011775 | 2.4369e-35 | 78.41% | ||
jgi|Poptr1_1|549334|eugene3.00011775 | ||||
HSP 1 Score: 144.436 bits (363), Expect = 2.4369e-35 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTL 266 | ||||
eugene3.00091019 | 6.00229e-34 | 78.41% | ||
jgi|Poptr1_1|557759|eugene3.00091019 | ||||
HSP 1 Score: 139.813 bits (351), Expect = 6.00229e-34 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTL 266 | ||||
grail3.0001090401 | 5.08125e-33 | 76.14% | ||
jgi|Poptr1_1|649951|grail3.0001090401 | ||||
HSP 1 Score: 136.732 bits (343), Expect = 5.08125e-33 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTL 266 | ||||
estExt_fgenesh4_pg.C_LG_I2533 | 8.6673e-33 | 65.22% | ||
jgi|Poptr1_1|815665|estExt_fgenesh4_pg.C_LG_I2533 | ||||
HSP 1 Score: 135.961 bits (341), Expect = 8.6673e-33 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTLAATK 278 | ||||
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Blast Hits to Contig V2 RO454
Analysis Date: 11-18-2009 (Blast: WO454_contigs_v2_vs_RO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
RO454_contig17665_v2 | 9.28098e-53 | 100.00% | ||
RO454_contig17665_v2 | ||||
HSP 1 Score: 202.221 bits (435), Expect = 9.28098e-53 Query: 5 PWNACHGGYTGQATRATCVSVDFGKEDGCREWHWRNERDARDD*LCSKTWHHGRH*GCFNGLCEHRNGASC*E 223 HSP 2 Score: 186.184 bits (400), Expect = 6.24168e-48 Query: 3 LSKTLHCGVHIIH*NNLNVCRDAMFCCKVNHLLRLFHSSNATPGNHLPSRNQRKHR*L*WLVRYTHHDKRSMG 221 HSP 3 Score: 175.645 bits (377), Expect = 9.28529e-45 Query: 4 PMERLSWWVYRTSH*SYLCFR*FREGRWLPGVALEE*KRRKR*LTLQQNMASRQTLRLFQWIM*TPQWSVLLR 222 HSP 4 Score: 171.521 bits (368), Expect = 1.61885e-43 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAK 221 HSP 5 Score: 141.279 bits (302), Expect = 2.05534e-34 Query: 4 S*QDAPLRCSHNPLKQPQCLP*CHVXXXXXXXXXXXXXXQCHSRQPSSFPKSTETQVALVACPVYPP*QAFHG 222 HSP 6 Score: 138.988 bits (297), Expect = 1.0059e-33 Query: 2 FLARRSIAVFT*SIETTSMSAVMPCFAAKSIISCVSFIPPMPLPATIFLPEIXXXXXXXXXXXGIPTMTSVPWE 223 | ||||
RO454_contig20716_v2 | 6.8206e-41 | 82.14% | ||
RO454_contig20716_v2 | ||||
HSP 1 Score: 162.815 bits (349), Expect = 6.8206e-41 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDI 254 HSP 2 Score: 100.499 bits (213), Expect = 3.882e-22 Query: 74 MSMTNLYLTSFLARRSIAVFT*SIETTSMSAVMPCFAAKSIISCVSFIPPMPLPATIFLP 253 HSP 3 Score: 83.0867 bits (175), Expect = 6.76967e-17 Query: 6 NVNDKPVSNIILSKTLHCGVHIIH*NNLNVCRDAMFCCKVNHLLRLFHSSNATPGNHLPSRNQRKHR*L*WLVRYTHHDKRSM 254 HSP 4 Score: 82.6285 bits (174), Expect = 9.38345e-17 Query: 14 ACHGGYTGQATRATCVSVDFGKEDGCREWHWRNERDARDD*LCSKTWHHGRH*GCFNGLCEHRNGASC*E*C*IQVCH*H 253 HSP 5 Score: 65.6747 bits (137), Expect = 1.19108e-11 Query: 22 WWVYRTSH*SYLCFR*FREGRWLPGVALEE*KRRKR*LTLQQNMASRQTLRLFQWIM*TPQWSVLLRMMLDTGLSLT 252 | ||||
RO454_contig5975_v2 | 2.87426e-35 | 70.77% | ||
RO454_contig5975_v2 | ||||
HSP 1 Score: 118.827 bits (253), Expect = 2.87426e-35 Query: 75 GRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTLA 269 HSP 2 Score: 44.5971 bits (91), Expect = 2.87426e-35 Query: 6 HGTLVMVGIPDKPLELPVFPLISG 77 HSP 3 Score: 76.2135 bits (160), Expect = 7.9357e-15 Query: 68 KVFPMSMTNLYLTSFLARRSIAVFT*SIETTSMSAVMPCFAAKSIISCVSFIPPMPLPATIFLPEI 265 | ||||
RO454_contig20796_v2 | 3.05758e-31 | 80.60% | ||
RO454_contig20796_v2 | ||||
HSP 1 Score: 130.74 bits (279), Expect = 3.05758e-31 Query: 75 GRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTLAAT 275 HSP 2 Score: 108.746 bits (231), Expect = 1.27713e-24 Query: 74 VFPMSMTNLYLTSFLARRSIAVFT*SIETTSMSAVMPCFAAKSIISCVSFIPPMPLPATIFLP 262 HSP 3 Score: 86.2941 bits (182), Expect = 7.32868e-18 Query: 98 WHWRNERDARDD*LCSKTWHHGRH*GCFNGLCEHRNGASC*E*C*IQVCH*HWKHL 265 HSP 4 Score: 83.5449 bits (176), Expect = 4.92757e-17 Query: 78 QGVSNVNDKPVSNIILSKTLHCGVHIIH*NNLNVCRDAMFCCKVNHLLRLFHSSNATPGNHLP 266 | ||||
RO454_contig6323_v2 | 1.62073e-23 | 47.06% | ||
RO454_contig6323_v2 | ||||
HSP 1 Score: 105.081 bits (223), Expect = 1.62073e-23 Query: 9 GTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNT 263 | ||||
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Analysis Date: 11-18-2009 (Blast: WO454_contigs_v2_vs_TAIR7_pep_20070425)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
AT4G37970.1 | 1.24962e-33 | 71.74% | ||
mannitol dehydrogenase, putative | chr4:17849666-17852139 FORWARD | ||||
HSP 1 Score: 138.658 bits (348), Expect = 1.24962e-33 Query: 3 SHGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTLAATK 278 | ||||
AT4G39330.1 | 2.13152e-33 | 70.45% | ||
mannitol dehydrogenase, putative | chr4:18291262-18292766 FORWARD | ||||
HSP 1 Score: 137.887 bits (346), Expect = 2.13152e-33 Query: 6 HGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTLA 269 | ||||
AT4G37980.1 | 4.74854e-33 | 74.16% | ||
ELI3-1 (ELICITOR-ACTIVATED GENE 3); oxidoreductase/ zinc ion binding | chr4:17852664-17854296 FORWARD | ||||
HSP 1 Score: 136.732 bits (343), Expect = 4.74854e-33 Query: 9 GTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTLAAT 275 | ||||
AT4G37990.1 | 4.01988e-32 | 77.91% | ||
ELI3-2 (ELICITOR-ACTIVATED GENE 3) | chr4:17855958-17857382 FORWARD | ||||
HSP 1 Score: 133.65 bits (335), Expect = 4.01988e-32 Query: 9 GTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTL 266 | ||||
AT2G21730.1 | 4.15992e-29 | 64.37% | ||
mannitol dehydrogenase, putative | chr2:9287134-9288703 FORWARD | ||||
HSP 1 Score: 123.635 bits (309), Expect = 4.15992e-29 Query: 6 HGTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTL 266 | ||||
AT2G21890.1 | 2.69638e-28 | 63.95% | ||
mannitol dehydrogenase, putative | chr2:9338169-9339726 FORWARD | ||||
HSP 1 Score: 120.939 bits (302), Expect = 2.69638e-28 Query: 9 GTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTL 266 | ||||
AT4G34230.1 | 3.19254e-21 | 53.93% | ||
CAD5 (CINNAMYL ALCOHOL DEHYDROGENASE 5); cinnamyl-alcohol dehydrogenase | chr4:16386902-16388670 REVERSE | ||||
HSP 1 Score: 97.4413 bits (241), Expect = 3.19254e-21 Query: 9 GTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDI-GNTLAA 272 | ||||
AT4G34230.2 | 1.21316e-20 | 52.81% | ||
CAD5 (CINNAMYL ALCOHOL DEHYDROGENASE 5) | chr4:16386902-16388670 REVERSE | ||||
HSP 1 Score: 95.5153 bits (236), Expect = 1.21316e-20 Query: 9 GTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDI-GNTLAA 272 | ||||
AT3G19450.1 | 1.25543e-17 | 45.88% | ||
CAD4 (CINNAMYL ALCOHOL DEHYDROGENASE 4); cinnamyl-alcohol dehydrogenase | chr3:6744865-6747011 FORWARD | ||||
HSP 1 Score: 85.5001 bits (210), Expect = 1.25543e-17 Query: 9 GTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNT 263 | ||||
AT1G72680.1 | 4.03857e-16 | 47.67% | ||
cinnamyl-alcohol dehydrogenase, putative | chr1:27363008-27364538 REVERSE | ||||
HSP 1 Score: 80.4925 bits (197), Expect = 4.03857e-16 Query: 9 GTLVMVGIPDKPLELPVFPLISGRKMVAGSGIGGMKETQEMIDFAAKHGITADIEVVSMDYVNTAMERLAKNDVRYRFVIDIGNTL 266 | ||||
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