RO454_contig26104_v2
| Name | RO454_contig26104_v2 |
|---|---|
| Accession | ID3232892 |
| Sequence | GTATCCTTATGAATATTCACATCGTTCCTCACCTTCTTGGCGTTTTGGTG |
| Length | 792 |
| Type | contig |
| Organism | Red Oak |
[-] Collapse All
References
| Dababase | Accession |
|---|---|
| GFF_source | SeqManPro |
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Alignment Viewer
ESTs in this contig
| Type | Feature | Position | ||
|---|---|---|---|---|
| EST | ROB_040740_3208_1220 | 0-259 | ||
| EST | ROB_086808_3219_3629 | 0-259 | ||
| EST | ROB_125054_1383_3376 | 146-402 | ||
| microsatellite | RO454_contig26104_v2-ssr244 | 243 | 258 | 0 |
| EST | ROB_119838_1456_2800 | 272-418 | ||
| microsatellite | RO454_contig26104_v2-ssr297 | 296 | 308 | 0 |
| EST | ROB_131016_1261_2385 | 332-611 | ||
| EST | ROB_120444_1408_2645 | 334-469 | ||
| EST | ROA_112543_2772_3178 | 343-621 | ||
| EST | ROA_035145_2753_0498 | 343-622 | ||
| EST | ROB_126668_1714_1991 | 350-634 | ||
| EST | ROB_042032_1228_1715 | 370-640 | ||
| EST | ROB_143913_3977_1497 | 380-653 | ||
| EST | ROB_082120_1786_0580 | 388-664 | ||
| EST | ROB_052786_1815_2882 | 432-665 | ||
| EST | ROB_041659_1868_0851 | 463-729 | ||
| EST | ROB_080676_1636_1566 | 527-788 | ||
| EST | ROB_082208_1539_2953 | 533-746 | ||
| EST | ROA_021822_2634_2881 | 554-792 | ||
| EST | ROA_011699_2974_1717 | 554-792 | ||
| EST | ROB_053468_3697_3296 | 580-780 | ||
| EST | ROB_082722_1657_3655 | 608-751 | ||
| point_mutation | RO454_contig26104_v2-snp613 | 612 | 614 | 0 |
| point_mutation | RO454_contig26104_v2-snp702 | 701 | 703 | 0 |
GO terms assigned to this feature
| Accession | Category | Term |
|---|---|---|
| GO:0009664 | biological_process | plant-type cell wall organization |
| GO:0005199 | molecular_function | structural constituent of cell wall |
InterProScan Analysis
Analysis Date: 11-19-2009
(Interpro: RO454_contigs_v2)
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Blast Hits to Contigs V2 AB454
Analysis Date: 11-18-2009 (Blast: RO454_contigs_v2_vs_AB454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
AB454_contig2164_v2 | 1.18473e-37 | 55.56% | ||
AB454_contig2164_v2 | ||||
HSP 1 Score: 119.743 bits (255), Expect = 1.18473e-37 Query: 308 I*VQVSPTSGEVXSTXX*VQVPXXXXXXXXXXIXVQVPTTSGTLTSTAIRVQITSPTREISSTTGLQLCISPTTHSIISLERSTTCQYQLCFSFKNAIK 604 HSP 2 Score: 38.6404 bits (78), Expect = 1.18473e-37 Query: 602 KGSVSERYRDQASNPDLLNKG 664 HSP 3 Score: 30.3927 bits (60), Expect = 1.18473e-37 Query: 653 LNKGLTAPIECHPLCSS 703 HSP 4 Score: 114.703 bits (244), Expect = 3.40614e-29 Query: 301 FIAFLKLKHNWYWHVVERSKLIIEWVVGEMHNCRPVVEEISLVGEVICTRMAVEVSVPEVVGTCTXMXXXXXXXXXVGTCTHXXVEXTSPEVGETCTHMVV 603 HSP 5 Score: 27.6434 bits (54), Expect = 3.40614e-29 Query: 604 PLFNKSGFDA*SRYLSLTEP 663 HSP 6 Score: 81.712 bits (172), Expect = 4.47576e-28 Query: 472 PHQRNLLHHRSTVMHLPHHPLNNKLGTFDHVPIPIMF*F*KCNKG 606 HSP 7 Score: 51.0121 bits (105), Expect = 4.47576e-28 Query: 326 PTSGEVXSTXX*VQVPXXXXXXXXXXIXVQVPTTSGTLTSTAIRVQITSPTREISSTT 499 HSP 8 Score: 23.5196 bits (45), Expect = 4.47576e-28 Query: 603 RAQLVKDIEIKHRIQI 650 HSP 9 Score: 57.427 bits (119), Expect = 2.08665e-23 Query: 504 PLLHF*N*NIIGIGTWSNVPSLLLSGWWGRCITV 605 HSP 10 Score: 37.2658 bits (75), Expect = 2.08665e-23 Query: 442 VVEEISLVGEVICTRMAVE 498 HSP 11 Score: 31.7673 bits (63), Expect = 2.08665e-23 Query: 295 TCTHXXVEXTSPEVGETCTHMVVVE 369 HSP 12 Score: 26.727 bits (52), Expect = 2.08665e-23 Query: 346 SVPEVVGTCTXMXXXXXXXXXVGTCTHXXVE 438 HSP 13 Score: 25.3524 bits (49), Expect = 2.08665e-23 Query: 605 IWIRCLISISFTN*A 649 HSP 14 Score: 36.8076 bits (74), Expect = 7.25899e-11 Query: 425 TSGTLTSTAIRVQITSPTREISSTT 499 HSP 15 Score: 29.9345 bits (59), Expect = 7.25899e-11 Query: 341 VXSTXX*VQVPXXXXXXXXXXIXVQVPTTSGTLTST 448 HSP 16 Score: 29.4763 bits (58), Expect = 7.25899e-11 Query: 531 TQ**AWNVRPRANTNYVLVLKMQ*R 605 HSP 17 Score: 21.6867 bits (41), Expect = 7.25899e-11 Query: 472 PHQRNLLHHRSTVMHLPHHP 531 HSP 18 Score: 51.9285 bits (107), Expect = 8.81662e-11 Query: 325 RPVVEEISLVGEVICTRMAVEVSVPEVVGTCTXMXXXXXXXXXVGTCTHXXVEXTSPEVG 504 HSP 19 Score: 26.727 bits (52), Expect = 8.81662e-11 Query: 530 LYCIFKTKT*LVLARGRTFQAYY*V 604 HSP 20 Score: 22.1449 bits (42), Expect = 8.81662e-11 Query: 268 EVGETCTHMVVVENAQVXEVTC 333 | ||||
AB454_contig4665_v2 | 9.93878e-14 | 50.00% | ||
AB454_contig4665_v2 | ||||
HSP 1 Score: 43.2225 bits (88), Expect = 9.93878e-14 Query: 301 VVGTCTXMXXXXXXXXXVGTCTHXXVEXTSPEVGETCTHMVV 426 HSP 2 Score: 34.9748 bits (70), Expect = 9.93878e-14 Query: 265 GETCTHMVVVENAQVXEVTCT 327 HSP 3 Score: 32.6837 bits (65), Expect = 9.93878e-14 Query: 442 VVEEISLVGEVICTRMAVE 498 HSP 4 Score: 50.5539 bits (104), Expect = 2.56234e-12 Query: 265 GTCTXMXXXXXXXXXVGTCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTCT 420 HSP 5 Score: 37.2658 bits (75), Expect = 2.56234e-12 Query: 442 VVEEISLVGEVICTRMAVE 498 | ||||
AB454_contig2820_v2 | 1.13641e-13 | 47.50% | ||
AB454_contig2820_v2 | ||||
HSP 1 Score: 71.1732 bits (149), Expect = 1.13641e-13 Query: 178 TCTXMXXXXXXXXXVGTCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTCTXXXXXXXXXXXXXHQRLNPHCLQQLQRPM 417 HSP 2 Score: 22.6031 bits (43), Expect = 1.13641e-13 Query: 504 LLSGWWGRCITV 539 HSP 3 Score: 42.3061 bits (86), Expect = 4.65065e-11 Query: 265 TCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTCT 369 HSP 4 Score: 38.6404 bits (78), Expect = 4.65065e-11 Query: 171 TRD*THIACNNYKGQCYN 224 | ||||
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Blast Hits to Contigs V2 ABall
Analysis Date: 11-18-2009 (Blast: RO454_contigs_v2_vs_ABall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
ABall_contig2238_v2 | 1.09407e-33 | 55.56% | ||
ABall_contig2238_v2 | ||||
HSP 1 Score: 119.743 bits (255), Expect = 1.09407e-33 Query: 308 I*VQVSPTSGEVXSTXX*VQVPXXXXXXXXXXIXVQVPTTSGTLTSTAIRVQITSPTREISSTTGLQLCISPTTHSIISLERSTTCQYQLCFSFKNAIK 604 HSP 2 Score: 37.724 bits (76), Expect = 1.09407e-33 Query: 602 KGSVSERYRDQASNPD 649 HSP 3 Score: 114.703 bits (244), Expect = 8.85197e-29 Query: 301 FIAFLKLKHNWYWHVVERSKLIIEWVVGEMHNCRPVVEEISLVGEVICTRMAVEVSVPEVVGTCTXMXXXXXXXXXVGTCTHXXVEXTSPEVGETCTHMVV 603 HSP 4 Score: 26.2688 bits (51), Expect = 8.85197e-29 Query: 604 KSGFDA*SRYLSLTEP 651 HSP 5 Score: 81.712 bits (172), Expect = 4.52033e-28 Query: 472 PHQRNLLHHRSTVMHLPHHPLNNKLGTFDHVPIPIMF*F*KCNKG 606 HSP 6 Score: 51.0121 bits (105), Expect = 4.52033e-28 Query: 326 PTSGEVXSTXX*VQVPXXXXXXXXXXIXVQVPTTSGTLTSTAIRVQITSPTREISSTT 499 HSP 7 Score: 23.5196 bits (45), Expect = 4.52033e-28 Query: 603 RAQLVKDIEIKHRIQI 650 HSP 8 Score: 57.427 bits (119), Expect = 2.32653e-26 Query: 504 PLLHF*N*NIIGIGTWSNVPSLLLSGWWGRCITV 605 HSP 9 Score: 53.7613 bits (111), Expect = 2.32653e-26 Query: 274 CTRMAVEVSVPEVVGTCTXMXXXXXXXXXVGTCTHXXVEXTSPEVGETCTHMVVVENAQVXEV 462 HSP 10 Score: 37.2658 bits (75), Expect = 2.32653e-26 Query: 442 VVEEISLVGEVICTRMAVE 498 HSP 11 Score: 25.3524 bits (49), Expect = 2.32653e-26 Query: 605 IWIRCLISISFTN*A 649 | ||||
ABall_contig2597_v2 | 4.21566e-17 | 46.25% | ||
ABall_contig2597_v2 | ||||
HSP 1 Score: 73.9225 bits (155), Expect = 4.21566e-17 Query: 178 TCTXMXXXXXXXXXVGTCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTCTXXXXXXXXXXXXXHQRLNPHCLQQLQRPM 417 HSP 2 Score: 27.6434 bits (54), Expect = 4.21566e-17 Query: 403 VVEEISLVGEVICTRMAVEVSVPEVVGTCTXM 498 HSP 3 Score: 47.3464 bits (97), Expect = 2.27289e-15 Query: 188 CSCCKQCGFSLW*CLSLCF 244 HSP 4 Score: 35.8912 bits (72), Expect = 2.27289e-15 Query: 308 I*VQVSPTSGEVXSTXX*VQVPXXXXXXXXXXIXVQVPTTSGTLTST 448 HSP 5 Score: 29.4763 bits (58), Expect = 2.27289e-15 Query: 472 PHQRNLLHHRSTVMHLPHH 528 HSP 6 Score: 44.1389 bits (90), Expect = 1.03827e-14 Query: 265 TCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTCT 369 HSP 7 Score: 38.6404 bits (78), Expect = 1.03827e-14 Query: 171 TRD*THIACNNYKGQCYN 224 HSP 8 Score: 27.6434 bits (54), Expect = 1.03827e-14 Query: 346 CRPVVEEISLVGEVICTRMAVEVSVPEVVGTCTXMXXXXXXXXXVGTCTHXXVE 507 | ||||
ABall_contig285_v2 | 4.87872e-11 | 46.97% | ||
ABall_contig285_v2 | ||||
HSP 1 Score: 62.4673 bits (130), Expect = 4.87872e-11 Query: 265 CTRMAVEVSVPEVVGTCTXMXXXXXXXXXVGTCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTCT 462 | ||||
ABall_contig2599_v2 | 7.40126e-11 | 50.00% | ||
ABall_contig2599_v2 | ||||
HSP 1 Score: 43.2225 bits (88), Expect = 7.40126e-11 Query: 301 VVGTCTXMXXXXXXXXXVGTCTHXXVEXTSPEVGETCTHMVV 426 HSP 2 Score: 37.2658 bits (75), Expect = 7.40126e-11 Query: 442 VVEEISLVGEVICTRMAVE 498 HSP 3 Score: 21.6867 bits (41), Expect = 7.40126e-11 Query: 268 TCTHMVVVENAQVXEVTC 321 HSP 4 Score: 42.7643 bits (87), Expect = 8.9537e-11 Query: 298 SVPEVVGTCTXMXXXXXXXXXVGTCTHXXVEXTSPEVGETCTHMVVV 438 HSP 5 Score: 37.2658 bits (75), Expect = 8.9537e-11 Query: 442 VVEEISLVGEVICTRMAVE 498 | ||||
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Blast Hits to Contigs V2 AC454
Analysis Date: 11-18-2009 (Blast: RO454_contigs_v2_vs_AC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
AC454_contig17422_v2 | 1.5673e-73 | 88.89% | ||
AC454_contig17422_v2 | ||||
HSP 1 Score: 193.973 bits (417), Expect = 1.5673e-73 Query: 521 PTTHSIISLERSTTCQYQLCFSFKNAIKGSVSERYRDQASNPDLLNKGLTAPIECHPLCSSSDLLVPTTSLVAMLHIMLLLYSGLGGFQE 790 HSP 2 Score: 99.124 bits (210), Expect = 1.5673e-73 Query: 308 I*VQVSPTSGEVXSTXX*VQVPXXXXXXXXXXIXVQVPTTSGTLTSTAIRVQITSPTREISSTTGLQLCISPTTHSI 538 HSP 3 Score: 162.357 bits (348), Expect = 2.7999e-69 Query: 525 SLGNLPSQNIIRA*CVTWPLEK**VREDLNYCIEGGIQLVQSDPYLTNLDSMLDLDIFH*LSPLLHF*N*NIIGIGTWSNVPSLLLSGW 791 HSP 4 Score: 116.536 bits (248), Expect = 2.7999e-69 Query: 298 SKLIIEWVVGEMHNCRPVVEEISLVGEVICTRMAVEVSVPEVVGTCTXMXXXXXXXXXVGTCTHXXVEXTSPEVGETCTHMVVV 549 HSP 5 Score: 171.063 bits (367), Expect = 3.37258e-64 Query: 540 *AWNVRPRANTNYVLVLKMQ*RAQLVKDIEIKHRIQIC*IRV*LHQLNATLYAVVQIFSYLLLL*WPCYTLCSYYILAWEVSKR 791 HSP 6 Score: 60.1762 bits (125), Expect = 3.37258e-64 Query: 472 PHQRNLLHHRSTVMHLPHHPLN 537 HSP 7 Score: 47.3464 bits (97), Expect = 3.37258e-64 Query: 410 VQVPTTSGTLTSTAIRVQITSPTREISSTT 499 HSP 8 Score: 26.2688 bits (51), Expect = 3.37258e-64 Query: 308 I*VQVSPTSGEVXSTXX*VQVPXXXXXXXXXXIXVQVPTTS 430 HSP 9 Score: 182.518 bits (392), Expect = 4.54981e-62 Query: 520 LSWKPPKPEYNKSIMCNMATREVVGTRRSELLHRGWHSIGAVRPLFNKSGFDA*SRYLSLTEPFIAFLKLKHNWYWHVVERSKLIIEWVVG 792 HSP 10 Score: 41.3897 bits (84), Expect = 4.54981e-62 Query: 403 RPVVEEISLVGEVICTRMAVEVSVPEVVGTCTXM 504 HSP 11 Score: 36.8076 bits (74), Expect = 4.54981e-62 Query: 501 LLSGWWGRCITVD 539 HSP 12 Score: 30.8509 bits (61), Expect = 4.54981e-62 Query: 268 GTCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTC 372 HSP 13 Score: 158.691 bits (340), Expect = 9.28493e-44 Query: 536 LLETSQARI**EHNV*HGH*RSSRYEKI*TTA*RVAFNWCSQTLI*QIWIRCLISISFTN*ALYCIFKTKT*LVLARGRTFQAYY 790 HSP 14 Score: 32.6837 bits (65), Expect = 9.28493e-44 Query: 268 VVGTCTXMXXXXXXXXXVGTCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTC 426 HSP 15 Score: 25.3524 bits (49), Expect = 9.28493e-44 Query: 412 VVEEISLVGEVICTRMAVEVSVPEVVGTC 498 HSP 16 Score: 70.715 bits (148), Expect = 1.78582e-31 Query: 649 FVK*GSDCTN*MPPSMQXXXXXXXXXXXXGHVTHYALIIFWLGRFPRE 792 HSP 17 Score: 62.4673 bits (130), Expect = 1.78582e-31 Query: 526 HPLNNKLGTFDHVPIPIMF*F*KCNKGL 609 HSP 18 Score: 35.8912 bits (72), Expect = 1.78582e-31 Query: 410 VQVPTTSGTLTSTAIRVQITSPTREISSTT 499 HSP 19 Score: 24.436 bits (47), Expect = 1.78582e-31 Query: 490 LHHRSTVMHLPH 525 | ||||
AC454_contig20361_v2 | 3.393e-23 | 90.48% | ||
AC454_contig20361_v2 | ||||
HSP 1 Score: 105.081 bits (223), Expect = 3.393e-23 Query: 3 PYVNHANGWFAPSPRPQAVDPPPYVDHQNAKKVRNDVNIHKD 128 HSP 2 Score: 100.957 bits (214), Expect = 5.88889e-22 Query: 3 ILMNIHIVPHLLGVLVVHIRRWVHSLWPRARCEPPISVVNIRV 131 HSP 3 Score: 94.0837 bits (199), Expect = 6.93445e-20 Query: 2 TLMLTTLMGGSHLALGHKLWTHLLMWTTKTPRR*GTM*IFIRI 130 HSP 4 Score: 87.2105 bits (184), Expect = 8.09224e-18 Query: 2 YPYEYSHRSSPSWRFGGPHKEVGPQLVA*G*VRTTH*R 115 HSP 5 Score: 87.2105 bits (184), Expect = 8.12886e-18 Query: 1 R*WVVRT*P*ATSCGPTSLCGPPKRQEGEERCEYS*GY 114 | ||||
AC454_contig19011_v2 | 2.12468e-22 | 85.71% | ||
AC454_contig19011_v2 | ||||
HSP 1 Score: 73.4643 bits (154), Expect = 2.12468e-22 Query: 265 TCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTCT 369 HSP 2 Score: 48.2628 bits (99), Expect = 2.12468e-22 Query: 171 TRD*THIACNNYKGQCYN 224 HSP 3 Score: 95.9165 bits (203), Expect = 1.93782e-20 Query: 178 VVEEISLVGEVICTRMAVEVSVPEVVGTCTXMXXXXXXXXXVGTCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTCTXXXXXXXXXXXXXHQRLNPHCLQQLQRPM 498 HSP 4 Score: 58.8016 bits (122), Expect = 2.20578e-17 Query: 185 LCSCCKQCGFSLW*CLSLCF 244 HSP 5 Score: 45.9718 bits (94), Expect = 2.20578e-17 Query: 308 I*VQVSPTSGEVXSTXX*VQVPXXXXXXXXXXIXVQVPTTSGTLTSTAIRVQITSPTREISSTTGLQLCISPTTHSI 538 HSP 6 Score: 55.1359 bits (114), Expect = 3.13494e-12 Query: 265 TCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTCT 369 HSP 7 Score: 31.7673 bits (63), Expect = 3.13494e-12 Query: 403 VVEEISLVGEVICTRMAVEVSVPEVVGTCTXM 498 HSP 8 Score: 22.1449 bits (42), Expect = 3.13494e-12 Query: 128 QXTSST*AFST 160 HSP 9 Score: 49.6374 bits (102), Expect = 1.02394e-11 Query: 298 CTRMAVEVSVPEVVGTCTXMXXXXXXXXXVGTCTHXXVEXTSPEVGETCTHMVVV 462 HSP 10 Score: 35.8912 bits (72), Expect = 1.02394e-11 Query: 265 ETCTHMVVVENAQVXEVTCT 324 HSP 11 Score: 57.8852 bits (120), Expect = 5.9259e-11 Query: 308 I*VQVSPTSGEVXSTXX*VQVPXXXXXXXXXXIXVQVPTTSGTLTSTAIRVQITSPTREISSTTGLQLCISPTTHSIISLERSTTCQY 571 HSP 12 Score: 28.1016 bits (55), Expect = 5.9259e-11 Query: 129 VENAQVEEVXCXQMVI 176 HSP 13 Score: 45.0554 bits (92), Expect = 6.55195e-11 Query: 265 EVGETCTHMVVVENAQVXEVTCT 333 HSP 14 Score: 37.724 bits (76), Expect = 6.55195e-11 Query: 358 VVEEISLVGEVICTRMAVEVSVPEVVGTCTXMXXXXXXXXXVGTCTH 498 | ||||
AC454_contig32099_v2 | 1.41723e-16 | 87.50% | ||
AC454_contig32099_v2 | ||||
HSP 1 Score: 83.0867 bits (175), Expect = 1.41723e-16 Query: 409 VVGEMHNCRPVVEEISLVGEVICTRMAVEVSVPEVVGTCT 528 HSP 2 Score: 81.2538 bits (171), Expect = 5.02594e-16 Query: 404 IXVQVPTTSGTLTSTAIRVQITSPTREISSTTGLQLCISPTT 529 | ||||
AC454_contig17362_v2 | 1.11703e-13 | 85.71% | ||
AC454_contig17362_v2 | ||||
HSP 1 Score: 73.4643 bits (154), Expect = 1.11703e-13 Query: 265 TCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTCT 369 | ||||
AC454_contig32453_v2 | 2.76265e-13 | 78.26% | ||
AC454_contig32453_v2 | ||||
HSP 1 Score: 45.0554 bits (92), Expect = 2.76265e-13 Query: 265 EVGETCTHMVVVENAQVXEVTCT 333 HSP 2 Score: 38.6404 bits (78), Expect = 2.76265e-13 Query: 403 VVEEISLVGEVICTRMAVEVSVPEVVGTCTXM 498 HSP 3 Score: 29.0181 bits (57), Expect = 2.76265e-13 Query: 346 VVGTCTXMXXXXXXXXXVGTCTHXXVE 426 HSP 4 Score: 66.5912 bits (139), Expect = 1.30943e-11 Query: 298 VVEEISLVGEVICTRMAVEVSVPEVVGTCTXMXXXXXXXXXVGTCTHXXVEXTSPEVGETCTHMVVV 498 | ||||
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Blast Hits to Contigs V2 CC454
Analysis Date: 11-18-2009 (Blast: RO454_contigs_v2_vs_CC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
CC454_contig19675_v2 | 3.25479e-74 | 90.00% | ||
CC454_contig19675_v2 | ||||
HSP 1 Score: 196.722 bits (423), Expect = 3.25479e-74 Query: 521 PTTHSIISLERSTTCQYQLCFSFKNAIKGSVSERYRDQASNPDLLNKGLTAPIECHPLCSSSDLLVPTTSLVAMLHIMLLLYSGLGGFQE 790 HSP 2 Score: 99.5822 bits (211), Expect = 3.25479e-74 Query: 308 I*VQVSPTSGEVXSTXX*VQVPXXXXXXXXXXIXVQVPTTSGTLTSTAIRVQITSPTREISSTTGLQLCISPTTHSI 538 HSP 3 Score: 166.022 bits (356), Expect = 6.37788e-71 Query: 525 SLGNLPSQNIIRA*CVTWPLEK**VREDLNYCIEGGIQLVQSDPYLTNLDSMLDLDIFH*LSPLLHF*N*NIIGIGTWSNVPSLLLSGW 791 HSP 4 Score: 119.285 bits (254), Expect = 6.37788e-71 Query: 298 SKLIIEWVVGEMHNCRPVVEEISLVGEVICTRMAVEVSVPEVVGTCTXMXXXXXXXXXVGTCTHXXVEXTSPEVGETCTHMVVV 549 HSP 5 Score: 187.1 bits (402), Expect = 1.58075e-68 Query: 520 LSWKPPKPEYNKSIMCNMATREVVGTRRSELLHRGWHSIGAVRPLFNKSGFDA*SRYLSLTEPFIAFLKLKHNWYWHVVERSKLIIEWVVG 792 HSP 6 Score: 57.427 bits (119), Expect = 1.58075e-68 Query: 265 VVGTCTXMXXXXXXXXXVGTCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTCT 426 HSP 7 Score: 41.3897 bits (84), Expect = 1.58075e-68 Query: 403 RPVVEEISLVGEVICTRMAVEVSVPEVVGTCTXM 504 HSP 8 Score: 36.8076 bits (74), Expect = 1.58075e-68 Query: 501 LLSGWWGRCITVD 539 HSP 9 Score: 171.063 bits (367), Expect = 7.23202e-65 Query: 540 *AWNVRPRANTNYVLVLKMQ*RAQLVKDIEIKHRIQIC*IRV*LHQLNATLYAVVQIFSYLLLL*WPCYTLCSYYILAWEVSKR 791 HSP 10 Score: 60.1762 bits (125), Expect = 7.23202e-65 Query: 472 PHQRNLLHHRSTVMHLPHHPLN 537 HSP 11 Score: 47.3464 bits (97), Expect = 7.23202e-65 Query: 410 VQVPTTSGTLTSTAIRVQITSPTREISSTT 499 HSP 12 Score: 31.7673 bits (63), Expect = 7.23202e-65 Query: 308 I*VQVSPTSGEVXSTXX*VQVPXXXXXXXXXXIXVQVPTTS 430 HSP 13 Score: 158.691 bits (340), Expect = 1.52456e-51 Query: 536 LLETSQARI**EHNV*HGH*RSSRYEKI*TTA*RVAFNWCSQTLI*QIWIRCLISISFTN*ALYCIFKTKT*LVLARGRTFQAYY 790 HSP 14 Score: 65.6747 bits (137), Expect = 1.52456e-51 Query: 265 VVEEISLVGEVICTRMAVEVSVPEVVGTCTXMXXXXXXXXXVGTCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTCT 498 HSP 15 Score: 74.3807 bits (156), Expect = 3.92503e-32 Query: 649 FVK*GSDCTN*MPPSMQXXXXXXXXXXXXGHVTHYALIIFWLGRFPRE 792 HSP 16 Score: 62.4673 bits (130), Expect = 3.92503e-32 Query: 526 HPLNNKLGTFDHVPIPIMF*F*KCNKGL 609 HSP 17 Score: 37.724 bits (76), Expect = 3.92503e-32 Query: 404 IXVQVPTTSGTLTSTAIRVQITSPTREISSTT 499 HSP 18 Score: 24.436 bits (47), Expect = 3.92503e-32 Query: 490 LHHRSTVMHLPH 525 | ||||
CC454_contig3732_v2 | 6.02568e-25 | 85.71% | ||
CC454_contig3732_v2 | ||||
HSP 1 Score: 73.4643 bits (154), Expect = 6.02568e-25 Query: 265 TCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTCT 369 HSP 2 Score: 45.5136 bits (93), Expect = 6.02568e-25 Query: 171 TRD*THIACNNYKGQCYN 224 HSP 3 Score: 34.5166 bits (69), Expect = 6.02568e-25 Query: 403 VVEEISLVGEVICTRMAVEVSVPEVVGTCTXM 498 HSP 4 Score: 96.3747 bits (204), Expect = 2.68095e-20 Query: 178 VGEMHNCRPVVEEISLVGEVICTRMAVEVSVPEVVGTCTXMXXXXXXXXXVGTCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTCTXXXXXXXXXXXXXHQRLNPHCLQQLQRPM 525 HSP 5 Score: 56.0524 bits (116), Expect = 4.63926e-17 Query: 185 LCSCCKQCGFSLW*CLSLCF 244 HSP 6 Score: 40.4733 bits (82), Expect = 4.63926e-17 Query: 404 IXVQVPTTSGTLTSTAIRVQITSPTREIS 490 HSP 7 Score: 29.9345 bits (59), Expect = 4.63926e-17 Query: 308 I*VQVSPTSGEVXSTXX*VQVPXXXXXXXXXXIXVQVPTTS 430 | ||||
CC454_contig10530_v2 | 2.29747e-22 | 90.48% | ||
CC454_contig10530_v2 | ||||
HSP 1 Score: 103.248 bits (219), Expect = 2.29747e-22 Query: 3 PYVNHANGWFAPSPRPQAVDPPPYVDHQNAKKVRNDVNIHKD 128 HSP 2 Score: 99.5822 bits (211), Expect = 2.90233e-21 Query: 3 ILMNIHIVPHLLGVLVVHIRRWVHSLWPRARCEPPISVVNIRV 131 HSP 3 Score: 95.4583 bits (202), Expect = 5.08319e-20 Query: 2 TLMLTTLMGGSHLALGHKLWTHLLMWTTKTPRR*GTM*IFIRI 130 HSP 4 Score: 85.8359 bits (181), Expect = 3.98825e-17 Query: 2 YPYEYSHRSSPSWRFGGPHKEVGPQLVA*G*VRTTH*R 115 HSP 5 Score: 85.3777 bits (180), Expect = 5.50422e-17 Query: 1 R*WVVRT*P*ATSCGPTSLCGPPKRQEGEERCEYS*GY 114 | ||||
CC454_contig25316_v2 | 7.92404e-17 | 58.93% | ||
CC454_contig25316_v2 | ||||
HSP 1 Score: 73.4643 bits (154), Expect = 7.92404e-17 Query: 202 TCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTCTXXXXXXXXXXXXXHQRLNPHC 369 HSP 2 Score: 30.3927 bits (60), Expect = 7.92404e-17 Query: 358 CTRMAVEVSVPEVVGTCTXMXXXXXXXXXVGTCTH 462 | ||||
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Blast Hits to Contigs V2 CCall
Analysis Date: 11-18-2009 (Blast: RO454_contigs_v2_vs_CCall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
CCall_contig6670_v2 | 3.37654e-74 | 90.00% | ||
CCall_contig6670_v2 | ||||
HSP 1 Score: 196.722 bits (423), Expect = 3.37654e-74 Query: 521 PTTHSIISLERSTTCQYQLCFSFKNAIKGSVSERYRDQASNPDLLNKGLTAPIECHPLCSSSDLLVPTTSLVAMLHIMLLLYSGLGGFQE 790 HSP 2 Score: 99.5822 bits (211), Expect = 3.37654e-74 Query: 308 I*VQVSPTSGEVXSTXX*VQVPXXXXXXXXXXIXVQVPTTSGTLTSTAIRVQITSPTREISSTTGLQLCISPTTHSI 538 HSP 3 Score: 166.022 bits (356), Expect = 6.61604e-71 Query: 525 SLGNLPSQNIIRA*CVTWPLEK**VREDLNYCIEGGIQLVQSDPYLTNLDSMLDLDIFH*LSPLLHF*N*NIIGIGTWSNVPSLLLSGW 791 HSP 4 Score: 119.285 bits (254), Expect = 6.61604e-71 Query: 298 SKLIIEWVVGEMHNCRPVVEEISLVGEVICTRMAVEVSVPEVVGTCTXMXXXXXXXXXVGTCTHXXVEXTSPEVGETCTHMVVV 549 HSP 5 Score: 187.1 bits (402), Expect = 3.56818e-68 Query: 520 LSWKPPKPEYNKSIMCNMATREVVGTRRSELLHRGWHSIGAVRPLFNKSGFDA*SRYLSLTEPFIAFLKLKHNWYWHVVERSKLIIEWVVG 792 HSP 6 Score: 57.427 bits (119), Expect = 3.56818e-68 Query: 265 VVGTCTXMXXXXXXXXXVGTCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTCT 426 HSP 7 Score: 41.3897 bits (84), Expect = 3.56818e-68 Query: 403 RPVVEEISLVGEVICTRMAVEVSVPEVVGTCTXM 504 HSP 8 Score: 36.8076 bits (74), Expect = 3.56818e-68 Query: 501 LLSGWWGRCITVD 539 HSP 9 Score: 171.063 bits (367), Expect = 4.15837e-64 Query: 540 *AWNVRPRANTNYVLVLKMQ*RAQLVKDIEIKHRIQIC*IRV*LHQLNATLYAVVQIFSYLLLL*WPCYTLCSYYILAWEVSKR 791 HSP 10 Score: 60.1762 bits (125), Expect = 4.15837e-64 Query: 472 PHQRNLLHHRSTVMHLPHHPLN 537 HSP 11 Score: 47.3464 bits (97), Expect = 4.15837e-64 Query: 410 VQVPTTSGTLTSTAIRVQITSPTREISSTT 499 HSP 12 Score: 30.3927 bits (60), Expect = 4.15837e-64 Query: 308 I*VQVSPTSGEVXSTXX*VQV 370 HSP 13 Score: 158.691 bits (340), Expect = 1.94701e-49 Query: 536 LLETSQARI**EHNV*HGH*RSSRYEKI*TTA*RVAFNWCSQTLI*QIWIRCLISISFTN*ALYCIFKTKT*LVLARGRTFQAYY 790 HSP 14 Score: 51.0121 bits (105), Expect = 1.94701e-49 Query: 268 TCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTC 369 HSP 15 Score: 29.4763 bits (58), Expect = 1.94701e-49 Query: 403 VVEEISLVGEVICTRMAVEVSVPEVVGTCTXM 498 HSP 16 Score: 74.3807 bits (156), Expect = 1.61145e-31 Query: 649 FVK*GSDCTN*MPPSMQXXXXXXXXXXXXGHVTHYALIIFWLGRFPRE 792 HSP 17 Score: 62.4673 bits (130), Expect = 1.61145e-31 Query: 526 HPLNNKLGTFDHVPIPIMF*F*KCNKGL 609 HSP 18 Score: 36.8076 bits (74), Expect = 1.61145e-31 Query: 413 QVPTTSGTLTSTAIRVQITSPTREISSTT 499 HSP 19 Score: 24.436 bits (47), Expect = 1.61145e-31 Query: 490 LHHRSTVMHLPH 525 | ||||
CCall_contig3850_v2 | 1.31329e-22 | 85.71% | ||
CCall_contig3850_v2 | ||||
HSP 1 Score: 73.4643 bits (154), Expect = 1.31329e-22 Query: 265 TCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTCT 369 HSP 2 Score: 45.5136 bits (93), Expect = 1.31329e-22 Query: 171 TRD*THIACNNYKGQCYN 224 HSP 3 Score: 26.727 bits (52), Expect = 1.31329e-22 Query: 349 VVGTCTXMXXXXXXXXXVGTCTHXXV 426 HSP 4 Score: 97.2911 bits (206), Expect = 1.47567e-20 Query: 178 VGEMHNCRPVVEEISLVGEVICTRMAVEVSVPEVVGTCTXMXXXXXXXXXVGTCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTCTXXXXXXXXXXXXXHQRLNPHCLQQLQRPM 525 HSP 5 Score: 56.0524 bits (116), Expect = 3.40661e-15 Query: 185 LCSCCKQCGFSLW*CLSLCF 244 HSP 6 Score: 42.3061 bits (86), Expect = 3.40661e-15 Query: 308 I*VQVSPTSGEVXSTXX*VQVPXXXXXXXXXXIXVQVPTTSGTLTSTAIRVQITSPTREISSTTGLQLCISPTTHSI 538 | ||||
CCall_contig10497_v2 | 2.38682e-22 | 90.48% | ||
CCall_contig10497_v2 | ||||
HSP 1 Score: 103.248 bits (219), Expect = 2.38682e-22 Query: 3 PYVNHANGWFAPSPRPQAVDPPPYVDHQNAKKVRNDVNIHKD 128 HSP 2 Score: 99.5822 bits (211), Expect = 3.01521e-21 Query: 3 ILMNIHIVPHLLGVLVVHIRRWVHSLWPRARCEPPISVVNIRV 131 HSP 3 Score: 95.4583 bits (202), Expect = 5.28088e-20 Query: 2 TLMLTTLMGGSHLALGHKLWTHLLMWTTKTPRR*GTM*IFIRI 130 HSP 4 Score: 85.8359 bits (181), Expect = 4.14336e-17 Query: 2 YPYEYSHRSSPSWRFGGPHKEVGPQLVA*G*VRTTH*R 115 HSP 5 Score: 85.3777 bits (180), Expect = 5.71828e-17 Query: 1 R*WVVRT*P*ATSCGPTSLCGPPKRQEGEERCEYS*GY 114 | ||||
CCall_contig25000_v2 | 8.67982e-15 | 55.36% | ||
CCall_contig25000_v2 | ||||
HSP 1 Score: 66.5912 bits (139), Expect = 8.67982e-15 Query: 202 TCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTCTXXXXXXXXXXXXXHQRLNPHC 369 HSP 2 Score: 30.3927 bits (60), Expect = 8.67982e-15 Query: 358 CTRMAVEVSVPEVVGTCTXMXXXXXXXXXVGTCTH 462 HSP 3 Score: 56.0524 bits (116), Expect = 1.34731e-13 Query: 308 I*VQVSPTSGEVXSTXX*VQVPXXXXXXXXXXIXVQVPTTSGTLTSTAIRVQITSPTREISSTTGLQLCISPTTHSIISLERSTTCQY 571 HSP 4 Score: 40.0151 bits (81), Expect = 1.34731e-13 Query: 200 KQCGFSLW*CLSLCF 244 | ||||
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Blast Hits to Contig V2 Oall
Analysis Date: 11-18-2009 (Blast: RO454_contigs_v2_vs_Oall_contigs_v2)
Best 10 Hits Shown | Show Best 25 Hits
Note: Click a description for more details.
Best 10 Hits Shown | Show Best 25 Hits
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
Oall_contig8152_v2 | 7.78614e-88 | 89.26% | ||
Oall_contig8152_v2 | ||||
HSP 1 Score: 320.439 bits (693), Expect = 7.78614e-88 Query: 346 LSWKPPKPEYNKSIMCNMATREVVGTRRSELLHRGWHSIGAVRPLFNKSGFDA*SRYLSLTEPFIAFLKLKHNWYWHVVERSKLIIEWVVGEMHNCRPVVEEISLVGEVICTRMAVEVSVPEVVGTCTXMXXXXXXXXXVGTCTHXXVE 792 HSP 2 Score: 295.237 bits (638), Expect = 3.00414e-80 Query: 347 STXX*VQVPXXXXXXXXXXIXVQVPTTSGTLTSTAIRVQITSPTREISSTTGLQLCISPTTHSIISLERSTTCQYQLCFSFKNAIKGSVSERYRDQASNPDLLNKGLTAPIECHPLCSSSDLLVPTTSLVAMLHIMLLLYSGLGGFQE 790 HSP 3 Score: 224.673 bits (484), Expect = 8.82999e-65 Query: 504 SLGNLPSQNIIRA*CVTWPLEK**VREDLNYCIEGGIQLVQSDPYLTNLDSMLDLDIFH*LSPLLHF*N*NIIGIGTWSNVPSLLLSGWWGRCITV 791 HSP 4 Score: 42.7643 bits (87), Expect = 8.82999e-65 Query: 265 CTHXXVEXTSPEVGETCTHMVVVENAQVXEVTCT 366 HSP 5 Score: 196.264 bits (422), Expect = 1.76707e-56 Query: 531 TQ**AWNVRPRANTNYVLVLKMQ*RAQLVKDIEIKHRIQIC*IRV*LHQLNATLYAVVQIFSYLLLL*WPCYTLCSYYILAWEVSKR 791 HSP 6 Score: 40.4733 bits (82), Expect = 1.76707e-56 Query: 410 VQVPTTSGTLTSTAIRVQITSPTREISSTTGLQLCISPT 526 HSP 7 Score: 187.558 bits (403), Expect = 8.80812e-53 Query: 530 LLETSQARI**EHNV*HGH*RSSRYEKI*TTA*RVAFNWCSQTLI*QIWIRCLISISFTN*ALYCIFKTKT*LVLARGRTFQAYY*V 790 HSP 8 Score: 36.8076 bits (74), Expect = 8.80812e-53 Query: 301 CTXMXXXXXXXXXVGTCTHXXVEXTSPEVGETCTHMVV 414 HSP 9 Score: 112.412 bits (239), Expect = 1.00123e-45 Query: 472 PHQRNLLHHRSTVMHLPHHPLNNKLGTFDHVPIPIMF*F*KCNKGL 609 HSP 10 Score: 82.6285 bits (174), Expect = 1.00123e-45 Query: 649 FVK*GSDCTN*MPPSMQXXXXXXXXXXXXGHVTHYALIIFWLGRFPRE 792 HSP 11 Score: 23.9778 bits (46), Expect = 1.00123e-45 Query: 440 TSTAIRVQITSPTREISSTT 499 | ||||
Oall_contig35750_v2 | 2.78601e-78 | 89.83% | ||
Oall_contig35750_v2 | ||||
HSP 1 Score: 259.497 bits (560), Expect = 2.78601e-78 Query: 439 LSWKPPKPEYNKSIMCNMATREVVGTRRSELLHRGWHSIGAVRPLFNKSGFDA*SRYLSLTEPFIAFLKLKHNWYWHVVERSKLIIEWVVGEMHNCRPVVEEISLVGEVICTRMAVEV 792 HSP 2 Score: 40.9315 bits (83), Expect = 2.78601e-78 Query: 349 VEVSVPEVVGTCTXMXXXXXXXXXVGTCTHXXV 447 HSP 3 Score: 28.1016 bits (55), Expect = 2.78601e-78 Query: 265 GTCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTCT 372 HSP 4 Score: 221.466 bits (477), Expect = 1.85581e-65 Query: 504 SLGNLPSQNIIRA*CVTWPLEK**VREDLNYCIEGGIQLVQSDPYLTNLDSMLDLDIFH*LSPLLHF*N*NIIGIGTWSNVPSLLLSGWWGRCITV 791 HSP 5 Score: 34.9748 bits (70), Expect = 1.85581e-65 Query: 265 VEXTSPEVGETCTHMVVVENAQVXEVTCT 351 HSP 6 Score: 29.0181 bits (57), Expect = 1.85581e-65 Query: 403 LVGEVICTRMAVEVSVPEVVGTCTXM 480 HSP 7 Score: 243.918 bits (526), Expect = 8.44085e-65 Query: 440 TSTAIRVQITSPTREISSTTGLQLCISPTTHSIISLERSTTCQYQLCFSFKNAIKGSVSERYRDQASNPDLLNKGLTAPIECHPLCSSSDLLVPTTSLVAMLHIMLLLYSGLGGFQE 790 HSP 8 Score: 194.89 bits (419), Expect = 1.19432e-52 Query: 531 TQ**AWNVRPRANTNYVLVLKMQ*RAQLVKDIEIKHRIQIC*IRV*LHQLNATLYAVVQIFSYLLLL*WPCYTLCSYYILAWEVSKR 791 HSP 9 Score: 34.0583 bits (68), Expect = 1.19432e-52 Query: 410 VQVPTTSGTLTSTAIRVQI 466 HSP 10 Score: 183.434 bits (394), Expect = 1.4869e-51 Query: 530 LLETSQARI**EHNV*HGH*RSSRYEKI*TTA*RVAFNWCSQTLI*QIWIRCLISISFTN*ALYCIFKTKT*LVLARGRTFQAYY*V 790 HSP 11 Score: 41.8479 bits (85), Expect = 1.4869e-51 Query: 298 VVGTCTXMXXXXXXXXXVGTCTHXXVEXTSPEVGETCTHMVVV 426 HSP 12 Score: 100.04 bits (212), Expect = 6.24056e-41 Query: 475 HQRNLLHHRSTVMHLPHHPLNNKLGTFDHVPIPIMF*F*KCNKGL 609 HSP 13 Score: 79.421 bits (167), Expect = 6.24056e-41 Query: 649 FVK*GSDCTN*MPPSMQXXXXXXXXXXXXGHVTHYALIIFWLGRFPRE 792 HSP 14 Score: 32.2255 bits (64), Expect = 6.24056e-41 Query: 308 I*VQVSPTSGEVXSTXX*VQVPXXXXXXXXXXIXVQVPTTSGTLTSTAIRVQIT 469 | ||||
Oall_contig38666_v2 | 1.43098e-63 | 83.65% | ||
Oall_contig38666_v2 | ||||
HSP 1 Score: 204.512 bits (440), Expect = 1.43098e-63 Query: 410 VQVPTTSGTLTSTAIRVQITSPTREISSTTGLQLCISPTTHSIISLERSTTCQYQLCFSFKNAIKGSVSERYRDQASNPDLLNKGLTAPIECHPLCSSSDLLVP 721 HSP 2 Score: 58.8016 bits (122), Expect = 1.43098e-63 Query: 185 LCSCCKQCGFSLW*CLSLCF 244 HSP 3 Score: 206.803 bits (445), Expect = 3.51796e-60 Query: 349 GTRRSELLHRGWHSIGAVRPLFNKSGFDA*SRYLSLTEPFIAFLKLKHNWYWHVVERSKLIIEWVVGEMHNCRPVVEEISLVGEVICTRMAVEVSVPEVVGTCTXMXXXXXXXXXVGTCTHXXV 720 HSP 4 Score: 42.3061 bits (86), Expect = 3.51796e-60 Query: 171 TRD*THIACNNYKGQCYN 224 HSP 5 Score: 171.979 bits (369), Expect = 5.18949e-60 Query: 501 VREDLNYCIEGGIQLVQSDPYLTNLDSMLDLDIFH*LSPLLHF*N*NIIGIGTWSNVPSLLLSGWWGRCITVD 719 HSP 6 Score: 79.421 bits (167), Expect = 5.18949e-60 Query: 178 GTCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTCTXXXXXXXXXXXXXHQRLNPHCLQQLQRPM 372 HSP 7 Score: 142.196 bits (304), Expect = 6.22757e-43 Query: 530 RSSRYEKI*TTA*RVAFNWCSQTLI*QIWIRCLISISFTN*ALYCIFKTKT*LVLARGRTFQAYY*V 730 HSP 8 Score: 49.1792 bits (101), Expect = 6.22757e-43 Query: 298 LVGEVICTRMAVEVSVPEVVGTCTXMXXXXXXXXXVGTCTHXXVEXTSPEVGETCTHMVVV 480 HSP 9 Score: 136.697 bits (292), Expect = 1.1181e-38 Query: 531 TQ**AWNVRPRANTNYVLVLKMQ*RAQLVKDIEIKHRIQIC*IRV*LHQLNATLYAVVQIFSYL 722 HSP 10 Score: 30.8509 bits (61), Expect = 1.1181e-38 Query: 308 I*VQVSPTSGEVXSTXX*VQVPXXXXXXXXXXIXVQVPTTSGTLTSTAIRVQITSPT 478 HSP 11 Score: 27.6434 bits (54), Expect = 1.1181e-38 Query: 165 QMVIALAFXXXXXXXXXXXXDAYPYA 242 HSP 12 Score: 97.2911 bits (206), Expect = 7.07914e-26 Query: 490 LHHRSTVMHLPHHPLNNKLGTFDHVPIPIMF*F*KCNKGL 609 HSP 13 Score: 36.8076 bits (74), Expect = 7.07914e-26 Query: 649 FVK*GSDCTN*MPPSMQ 699 | ||||
Oall_contig37327_v2 | 3.70467e-51 | 85.14% | ||
Oall_contig37327_v2 | ||||
HSP 1 Score: 155.484 bits (333), Expect = 3.70467e-51 Query: 3 TRD*THIACNNYKGQCYNXXXXXXXXXXXXXHPYVNHANGWFAPSPRPQAVDPPPYVDHQNAKKVRNDVNIHKD 224 HSP 2 Score: 54.2195 bits (112), Expect = 3.70467e-51 Query: 265 TCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTCT 369 HSP 3 Score: 27.6434 bits (54), Expect = 3.70467e-51 Query: 358 RPVVEEISLVGEVICTRMAVEVSVPEVVGTCTXMXXXXXXXXXVGTCTH 504 HSP 4 Score: 121.576 bits (259), Expect = 9.05006e-50 Query: 2 QXTSST*AFSTLMLTTLMGGSHLALGHKLWTHLLMWTTKTPRR*GTM*IFIRI 160 HSP 5 Score: 92.709 bits (196), Expect = 9.05006e-50 Query: 172 VGEMHNCRPVVEEISLVGEVICTRMAVEVSVPEVVGTCTXMXXXXXXXXXVGTCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTCTXXXXXXXXXXXXXHQRLNPHCLQQLQRPML* 525 HSP 6 Score: 156.858 bits (336), Expect = 1.86975e-45 Query: 3 ILMNIHIVPHLLGVLVVHIRRWVHSLWPRARCEPPISVVNIRVENAQVEEVXCXQMVIALAFXXXXXXXXXXXXDAYPYA 242 HSP 7 Score: 43.2225 bits (88), Expect = 1.86975e-45 Query: 308 I*VQVSPTSGEVXSTXX*VQVPXXXXXXXXXXIXVQVPTTSGTLTSTAIRVQITSPTREISSTT 499 HSP 8 Score: 22.6031 bits (43), Expect = 1.86975e-45 Query: 472 PHQRNLLHHRSTVMHLPHHPLN 537 HSP 9 Score: 95.9165 bits (203), Expect = 7.94903e-39 Query: 2 YPYEYSHRSSPSWRFGGPHKEVGPQLVA*G*VRTTH*R 115 HSP 10 Score: 58.8016 bits (122), Expect = 7.94903e-39 Query: 185 LCSCCKQCGFSLW*CLSLCF 244 HSP 11 Score: 33.1419 bits (66), Expect = 7.94903e-39 Query: 422 TTSGTLTSTAIRVQITSPTREISSTTGLQLCISPTTHSIISLERSTT 562 HSP 12 Score: 30.8509 bits (61), Expect = 7.94903e-39 Query: 308 I*VQVSPTSGEVXSTXX*VQV 370 HSP 13 Score: 95.0001 bits (201), Expect = 1.18689e-31 Query: 1 R*WVVRT*P*ATSCGPTSLCGPPKRQEGEERCEYS*GY 114 HSP 14 Score: 58.3434 bits (121), Expect = 1.18689e-31 Query: 265 VEVSVPEVVGTCTXMXXXXXXXXXVGTCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTCT 447 HSP 15 Score: 22.6031 bits (43), Expect = 1.18689e-31 Query: 433 VVEEISLVGEVICTRMAVEVSV 498 HSP 16 Score: 43.6807 bits (89), Expect = 1.2927e-11 Query: 1 VSL*IFTSFLTFLAFWW 51 HSP 17 Score: 39.5569 bits (80), Expect = 1.2927e-11 Query: 308 I*VQVSPTSGEVXSTXX*VQVPXXXXXXXXXXIXVQVPTTSGTLTSTAIRVQITSPTREISST 496 HSP 18 Score: 23.9778 bits (46), Expect = 1.2927e-11 Query: 199 QAMWVQSLV 225 | ||||
Oall_contig22991_v2 | 9.15912e-26 | 100.00% | ||
Oall_contig22991_v2 | ||||
HSP 1 Score: 114.245 bits (243), Expect = 9.15912e-26 Query: 3 PYVNHANGWFAPSPRPQAVDPPPYVDHQNAKKVRNDVNIHKD 128 HSP 2 Score: 109.205 bits (232), Expect = 3.0003e-24 Query: 3 ILMNIHIVPHLLGVLVVHIRRWVHSLWPRARCEPPISVVNIRV 131 HSP 3 Score: 104.622 bits (222), Expect = 7.21903e-23 Query: 2 TLMLTTLMGGSHLALGHKLWTHLLMWTTKTPRR*GTM*IFIRI 130 HSP 4 Score: 95.9165 bits (203), Expect = 3.00099e-20 Query: 2 YPYEYSHRSSPSWRFGGPHKEVGPQLVA*G*VRTTH*R 115 HSP 5 Score: 95.0001 bits (201), Expect = 5.68989e-20 Query: 1 R*WVVRT*P*ATSCGPTSLCGPPKRQEGEERCEYS*GY 114 | ||||
Oall_contig21812_v2 | 4.80271e-25 | 100.00% | ||
Oall_contig21812_v2 | ||||
HSP 1 Score: 81.2538 bits (171), Expect = 4.80271e-25 Query: 527 THSIISLERSTTCQYQLCFSFKNAIKGSVSERY 625 HSP 2 Score: 44.1389 bits (90), Expect = 4.80271e-25 Query: 194 CCKQCGFSLW*CLSL 238 HSP 3 Score: 24.8942 bits (48), Expect = 4.80271e-25 Query: 350 TXX*VQVPXXXXXXXXXXIXVQVPTTSGTLT 442 HSP 4 Score: 87.2105 bits (184), Expect = 1.23037e-24 Query: 526 YLSLTEPFIAFLKLKHNWYWHVVERSKLIIEWV 624 HSP 5 Score: 34.5166 bits (69), Expect = 1.23037e-24 Query: 349 VSVPEVVGTCTXMXXXXXXXXXVGTCTHXXV 441 HSP 6 Score: 27.1852 bits (53), Expect = 1.23037e-24 Query: 195 TRD*THIACN 224 HSP 7 Score: 78.0464 bits (164), Expect = 5.10945e-21 Query: 519 DIFH*LSPLLHF*N*NIIGIGTWSNVPSLLLSGWWG 626 HSP 8 Score: 31.3091 bits (62), Expect = 5.10945e-21 Query: 301 GTCTHXXVEXTSPEVGETCTHMVV 372 HSP 9 Score: 27.1852 bits (53), Expect = 5.10945e-21 Query: 196 QRLNPHCLQ 222 HSP 10 Score: 72.5479 bits (152), Expect = 5.44284e-16 Query: 530 ISFTN*ALYCIFKTKT*LVLARGRTFQAYY*V 625 HSP 11 Score: 29.4763 bits (58), Expect = 5.44284e-16 Query: 265 PEVGETCTHMVVVENAQVXEVTCT 336 HSP 12 Score: 75.2971 bits (158), Expect = 3.49225e-15 Query: 520 PHHPLNNKLGTFDHVPIPIMF*F*KCNKGL 609 HSP 13 Score: 23.9778 bits (46), Expect = 3.49225e-15 Query: 199 QAMWVQSLV 225 HSP 14 Score: 72.0897 bits (151), Expect = 4.46539e-13 Query: 531 TQ**AWNVRPRANTNYVLVLKMQ*RAQLVKDI 626 | ||||
Oall_contig7527_v2 | 3.99825e-21 | 72.55% | ||
Oall_contig7527_v2 | ||||
HSP 1 Score: 80.7956 bits (170), Expect = 3.99825e-21 Query: 346 VVEEISLVGEVICTRMAVEVSVPEVVGTCTXMXXXXXXXXXVGTCTHXXVE 498 HSP 2 Score: 37.2658 bits (75), Expect = 3.99825e-21 Query: 265 GTCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTCT 372 HSP 3 Score: 73.0061 bits (153), Expect = 2.36587e-13 Query: 347 STXX*VQVPXXXXXXXXXXIXVQVPTTSGTLTSTAIRVQITSPTREISSTT 499 HSP 4 Score: 38.1822 bits (77), Expect = 4.21155e-11 Query: 403 ICTRMAVEVSVPEVVGTCTXM 465 HSP 5 Score: 32.2255 bits (64), Expect = 4.21155e-11 Query: 265 GTCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTCT 372 HSP 6 Score: 30.3927 bits (60), Expect = 4.21155e-11 Query: 346 VVGTCTXMXXXXXXXXXVGTCTHXXVE 426 | ||||
Oall_contig6659_v2 | 5.50933e-21 | 65.63% | ||
Oall_contig6659_v2 | ||||
HSP 1 Score: 95.0001 bits (201), Expect = 5.50933e-21 Query: 178 TCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTCTXXXXXXXXXXXXXHQRLNPHCLQQLQRPM 369 HSP 2 Score: 22.6031 bits (43), Expect = 5.50933e-21 Query: 358 ISLVGEVICTRMAVEVSVPEVVGTCTXMXXXXXXXXXVGTCTH 486 HSP 3 Score: 58.8016 bits (122), Expect = 2.96515e-14 Query: 185 LCSCCKQCGFSLW*CLSLCF 244 HSP 4 Score: 38.6404 bits (78), Expect = 2.96515e-14 Query: 410 VQVPTTSGTLTSTAIRVQITSPTREISSTTGLQLCISPTTHSI 538 | ||||
Oall_contig22627_v2 | 5.91339e-21 | 67.65% | ||
Oall_contig22627_v2 | ||||
HSP 1 Score: 96.8329 bits (205), Expect = 5.91339e-21 Query: 313 MHNCRPVVEEISLVGEVICTRMAVEVSVPEVVGTCTXMXXXXXXXXXVGTCTHXXVEXTSPEVGETCT 516 HSP 2 Score: 22.1449 bits (42), Expect = 5.91339e-21 Query: 57 SPRPQAVDPPPY 92 HSP 3 Score: 86.7523 bits (183), Expect = 1.72169e-17 Query: 314 VQVSPTSGEVXSTXX*VQVPXXXXXXXXXXIXVQVPTTSGTLTSTAIRVQITSPTREISSTTGLQLCI 517 | ||||
Oall_contig21763_v2 | 2.85995e-18 | 92.11% | ||
Oall_contig21763_v2 | ||||
HSP 1 Score: 84.4613 bits (178), Expect = 2.85995e-18 Query: 409 GEMHNCRPVVEEISLVGEVICTRMAVEVSVPEVVGTCT 522 HSP 2 Score: 23.9778 bits (46), Expect = 2.85995e-18 Query: 265 VGETCTHMVVVENAQVXEVTCT 330 HSP 3 Score: 79.8792 bits (168), Expect = 2.01824e-15 Query: 410 VQVPTTSGTLTSTAIRVQITSPTREISSTTGLQLCISP 523 | ||||
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Blast Hits to Contigs V2 WO454
Analysis Date: 11-18-2009 (Blast: RO454_contigs_v2_vs_WO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
WO454_contig3958_v2 | 3.52439e-93 | 88.59% | ||
WO454_contig3958_v2 | ||||
HSP 1 Score: 319.98 bits (692), Expect = 3.52439e-93 Query: 346 LSWKPPKPEYNKSIMCNMATREVVGTRRSELLHRGWHSIGAVRPLFNKSGFDA*SRYLSLTEPFIAFLKLKHNWYWHVVERSKLIIEWVVGEMHNCRPVVEEISLVGEVICTRMAVEVSVPEVVGTCTXMXXXXXXXXXVGTCTHXXVE 792 HSP 2 Score: 42.3061 bits (86), Expect = 3.52439e-93 Query: 307 TCTHXXVEXTSPEVGETCTHM 369 HSP 3 Score: 293.863 bits (635), Expect = 8.75394e-82 Query: 347 STXX*VQVPXXXXXXXXXXIXVQVPTTSGTLTSTAIRVQITSPTREISSTTGLQLCISPTTHSIISLERSTTCQYQLCFSFKNAIKGSVSERYRDQASNPDLLNKGLTAPIECHPLCSSSDLLVPTTSLVAMLHIMLLLYSGLGGFQE 790 HSP 4 Score: 30.3927 bits (60), Expect = 8.75394e-82 Query: 308 I*VQVSPTSGEVXSTXX*VQV 370 HSP 5 Score: 222.382 bits (479), Expect = 4.67906e-74 Query: 504 SLGNLPSQNIIRA*CVTWPLEK**VREDLNYCIEGGIQLVQSDPYLTNLDSMLDLDIFH*LSPLLHF*N*NIIGIGTWSNVPSLLLSGWWGRCITV 791 HSP 6 Score: 49.6374 bits (102), Expect = 4.67906e-74 Query: 268 VVGTCTXMXXXXXXXXXVGTCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTC 426 HSP 7 Score: 48.2628 bits (99), Expect = 4.67906e-74 Query: 403 VVEEISLVGEVICTRMAVEVSVPEVVGTCTXM 498 HSP 8 Score: 196.264 bits (422), Expect = 3.96774e-59 Query: 531 TQ**AWNVRPRANTNYVLVLKMQ*RAQLVKDIEIKHRIQIC*IRV*LHQLNATLYAVVQIFSYLLLL*WPCYTLCSYYILAWEVSKR 791 HSP 9 Score: 39.5569 bits (80), Expect = 3.96774e-59 Query: 410 VQVPTTSGTLTSTAIRVQITSPTREISSTTGLQLCISPT 526 HSP 10 Score: 27.1852 bits (53), Expect = 3.96774e-59 Query: 308 I*VQVSPTSGEVXSTXX*VQVPXXXXXXXXXXIXVQVPTTS 430 HSP 11 Score: 183.893 bits (395), Expect = 1.90169e-58 Query: 530 LLETSQARI**EHNV*HGH*RSSRYEKI*TTA*RVAFNWCSQTLI*QIWIRCLISISFTN*ALYCIFKTKT*LVLARGRTFQAYY*V 790 HSP 12 Score: 38.6404 bits (78), Expect = 1.90169e-58 Query: 298 VVGTCTXMXXXXXXXXXVGTCTHXXVEXTSPEVGETCTHMVVV 426 HSP 13 Score: 38.1822 bits (77), Expect = 1.90169e-58 Query: 403 ICTRMAVEVSVPEVVGTCTXM 465 HSP 14 Score: 112.87 bits (240), Expect = 1.52269e-49 Query: 472 PHQRNLLHHRSTVMHLPHHPLNNKLGTFDHVPIPIMF*F*KCNKGL 609 HSP 15 Score: 80.7956 bits (170), Expect = 1.52269e-49 Query: 649 FVK*GSDCTN*MPPSMQXXXXXXXXXXXXGHVTHYALIIFWLGRFPRE 792 HSP 16 Score: 44.1389 bits (90), Expect = 1.52269e-49 Query: 308 I*VQVSPTSGEVXSTXX*VQVPXXXXXXXXXXIXVQVPTTSGTLTSTAIRVQITSPT 478 | ||||
WO454_contig15357_v2 | 9.91899e-43 | 82.67% | ||
WO454_contig15357_v2 | ||||
HSP 1 Score: 150.443 bits (322), Expect = 9.91899e-43 Query: 433 FNKSGFDA*SRYLSLTEPFIAFLKLKHNWYWHVVERSKLIIEWVVGEMHNCRPVVEEISLVGEVICTRMAVEVSV 657 HSP 2 Score: 39.0986 bits (79), Expect = 9.91899e-43 Query: 298 VVGTCTXMXXXXXXXXXVGTCTHXXVEXTSPEVGETCTHMVVV 426 HSP 3 Score: 145.861 bits (312), Expect = 1.37318e-39 Query: 440 TSTAIRVQITSPTREISSTTGLQLCISPTTHSIISLERSTTCQYQLCFSFKNAIKGSVSERYRDQASNPDLLN 658 HSP 4 Score: 33.1419 bits (66), Expect = 1.37318e-39 Query: 308 I*VQVSPTSGEVXSTXX*VQVPXXXXXXXXXXIXVQVPTTS 430 HSP 5 Score: 119.743 bits (255), Expect = 1.76066e-33 Query: 504 LTNLDSMLDLDIFH*LSPLLHF*N*NIIGIGTWSNVPSLLLSGWWGRCITV 656 HSP 6 Score: 31.3091 bits (62), Expect = 1.76066e-33 Query: 403 LVGEVICTRMAVEVSVPEVVGTCTXM 480 HSP 7 Score: 25.3524 bits (49), Expect = 1.76066e-33 Query: 265 GTCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTCT 372 HSP 8 Score: 100.499 bits (213), Expect = 1.89314e-27 Query: 475 HQRNLLHHRSTVMHLPHHPLNNKLGTFDHVPIPIMF*F*KCNKGL 609 HSP 9 Score: 37.724 bits (76), Expect = 1.89314e-27 Query: 410 VQVPTTSGTLTSTAIRVQITSPTREISSTT 499 HSP 10 Score: 93.1672 bits (197), Expect = 3.90288e-25 Query: 531 TQ**AWNVRPRANTNYVLVLKMQ*RAQLVKDIEIKHRIQIC* 656 HSP 11 Score: 32.6837 bits (65), Expect = 3.90288e-25 Query: 347 STXX*VQVPXXXXXXXXXXIXVQVPTTSGTLTSTAIRVQITSPT 478 HSP 12 Score: 22.1449 bits (42), Expect = 3.90288e-25 Query: 490 LHHRSTVMHLPHH 528 HSP 13 Score: 93.6255 bits (198), Expect = 1.22328e-23 Query: 530 I*QIWIRCLISISFTN*ALYCIFKTKT*LVLARGRTFQAYY*V 658 HSP 14 Score: 31.7673 bits (63), Expect = 1.22328e-23 Query: 349 ISLVGEVICTRMAVEVSVPEVVGTCTXMXXXXXXXXXVGTCTHXXV 486 | ||||
WO454_contig10876_v2 | 2.75247e-25 | 62.65% | ||
WO454_contig10876_v2 | ||||
HSP 1 Score: 111.496 bits (237), Expect = 2.75247e-25 Query: 178 VVGTCTXMXXXXXXXXXVGTCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTCTXXXXXXXXXXXXXHQRLNPHCLQQLQRPM 426 HSP 2 Score: 58.8016 bits (122), Expect = 1.56784e-17 Query: 185 LCSCCKQCGFSLW*CLSLCF 244 HSP 3 Score: 45.9718 bits (94), Expect = 1.56784e-17 Query: 308 I*VQVSPTSGEVXSTXX*VQVPXXXXXXXXXXIXVQVPTTSGTLTSTAI 454 HSP 4 Score: 43.2225 bits (88), Expect = 2.53007e-11 Query: 171 TRD*THIACNNYKGQCYN 224 HSP 5 Score: 40.4733 bits (82), Expect = 2.53007e-11 Query: 349 RPVVEEISLVGEVICTRMAVEVSVPEVVGTCTXMXXXXXXXXXVGTCTHXXV 504 | ||||
WO454_contig15356_v2 | 1.2272e-17 | 82.86% | ||
WO454_contig15356_v2 | ||||
HSP 1 Score: 70.715 bits (148), Expect = 1.2272e-17 Query: 265 TCTHXXVEXTSPEVGETCTHMVVVENAQVXEVTCT 369 HSP 2 Score: 37.724 bits (76), Expect = 1.2272e-17 Query: 403 RPVVEEISLVGEVICTRMAVEVSVPEVVGTCTXM 504 HSP 3 Score: 62.9255 bits (131), Expect = 4.77906e-13 Query: 274 TCTHXXVEXTSPEVGETCTHMVVVENAQVXEV 369 HSP 4 Score: 29.9345 bits (59), Expect = 4.77906e-13 Query: 358 VVEEISLVGEVICTRMAVEVSVPEVVGTCTXMXXXXXXXXXVGTCTH 498 HSP 5 Score: 40.9315 bits (83), Expect = 2.65887e-11 Query: 410 VQVPTTSGTLTSTAIRVQITSPTREISSTT 499 HSP 6 Score: 32.6837 bits (65), Expect = 2.65887e-11 Query: 308 I*VQVSPTSGEVXSTXX*VQV 370 HSP 7 Score: 26.727 bits (52), Expect = 2.65887e-11 Query: 475 HQRNLLHHRSTVMHLPHH 528 HSP 8 Score: 23.0613 bits (44), Expect = 2.65887e-11 Query: 129 VENAQVEEVXCXQMV 173 | ||||
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