RO454_contig14292_v2

NameRO454_contig14292_v2
AccessionID3124690
Sequence
CGATCATCAAACCCTAGCACAGACAACATCAAATTAAAGAGAGAGTAAAA
GAAGAATTTATAAGAAAAGAAAGGAATGGCAGAACAGGGATTAGGTGGAA
GGAGCCAACCAGTTGATCTCAAGAAGCACCCTTCTGGGATTGTCCCTACC
CTTCAGAACATTGTGTCYACAGTAAATTTGGACTGCAAATTGGATCTTAA
GGCCATTGCACTTCAAGCTCGTAATGCAGAATACAATCCCAAGCGTTTTG
CTGCTGTAATTATGAGGATAAGGGAACCAAAAACCACAGCCTTGATWTTT
GCTTCTGGGAAGATGGTTTGTACTGGAGCTAAGAGTGAACAACAGTCRAA
GTTGGCAGCACGGAAGTATGCTCGAATTATACAGAAGCTTGGTTTTCCCG
CTAAATTCAAGGATTTTAAGATTCAGAACATAGTTGGTTCATGTGATGTT
AAATTCCCCATCAGGCTTGAAGGACTGGCATATTCCCATGGTGCCTTTTC
TAGTTATGAGCCAGAGCTGTTCCCAGGGTTGATCTATCGCATGAAACAAC
CAAAGATTGTGCTGCTTATTTTCGTGTCAGGAAAAATCKTTCTYACAGGA
GCTAAGGTGAGAGATGAGACCTATACAGCCTTTGAGAACATATACCCGGT
GCTTACAGAGTTCAGGAAAAACCAGCAATGATTTTGTGGGAAGAGAAGCC
AGATCTTGTTTGCAAAAGTTAGgAGGTGGAATACCTGGCAATGTAGCTGC
TGAGCCTGGATTGAACTGTAAATATAAAAGCAAATTGTGCATCGGTTCTC
TGGTTTTGAAGTTaAAAAAGATGTGTTCAGTGTCTGCATTTAATTTTCTT
GGCTCTGATGTAGTAGTGGGAGAAGAACCATATATTTTACAGAGTTGTTG
AAAA
Length904
Typecontig
Organism Red Oak

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References

Dababase Accession
GFF_source SeqManPro

ESTs in this contig

Type Feature Position
EST ROB_123712_1574_2519 0-253
EST ROA_090513_2721_3211 105-361
EST ROB_045082_3411_2030 237-504
EST ROA_041277_2283_1057 448-702
EST ROA_056955_2832_3645 465-710
EST ROA_100537_0215_0549 508-671
EST ROA_068668_0456_2546 508-671
EST ROB_129113_3463_3649 559-826
EST ROB_075788_1659_1373 567-823
EST ROB_059329_1656_0714 595-854
point_mutation RO454_contig14292_v2-snp599 598 600 0
EST ROA_031408_2284_1366 636-904
point_mutation RO454_contig14292_v2-snp660 659 661 0

GO terms assigned to this feature

Accession Category Term
GO:0006367 biological_process transcription initiation from RNA polymerase II promoter
GO:0005622 cellular_component intracellular
GO:0005488 molecular_function binding
GO:0003677 molecular_function DNA binding
GO:0003702 molecular_function RNA polymerase II transcription factor activity
GO:0008270 molecular_function zinc ion binding

KEGG Analysis

Analysis Date: 11-25-2009 (KEGG: RO454_v2)
K03120 TBP, tbp; transcription initiation factor TFIID TATA-box-binding protein

InterProScan Analysis

Analysis Date: 11-19-2009 (Interpro: RO454_contigs_v2)
SEQUENCE: RO454_contig14292_v2_1_ORF2 CRC64: 6BF6F9D00FD64109 LENGTH: 205 aa
InterPro
IPR000814
Family
TATA-box binding
PTHR10126 [37-204]T 3.5e-136 PTHR10126 TATA-BOX BINDING PROTEIN TATA-BOX BINDING PROTEIN
PF00352 [25-110]T 2.6e-38 PF00352 TBP[115-201]T 4.3e-41 PF00352 TBP TBP
PS00351 [57-106]? NA PS00351 TFIID[148-197]T NA PS00351 TFIID TFIID
InterPro
IPR012294
Domain
Transcription factor TFIID, C-terminal/DNA glycosylase, N-terminal
SSF55945 [24-111]T 7.4e-33 SSF55945 TATA-box binding protein-like[114-202]T 6.8e-32 SSF55945 TATA-box binding protein-like TATA-box binding protein-like
InterPro
IPR012295
Domain
Beta2-adaptin/TATA-box binding, C-terminal
G3DSA:3.30.310.10 [29-109]T 5.9e-25 G3DSA:3.30.310.10 no description[110-205]T 1.1e-31 G3DSA:3.30.310.10 no description no description
noIPR
unintegrated
unintegrated
MF_00408 [24-203]T 27.395 MF_00408 TBP_MF_00408 TBP_MF_00408
SEQUENCE: RO454_contig14292_v2_2_ORF2 CRC64: C706D11B4838025C LENGTH: 96 aa
No hits reported.
SEQUENCE: RO454_contig14292_v2_4_ORF1 CRC64: DD4E044B78E4D78E LENGTH: 108 aa
No hits reported.
SEQUENCE: RO454_contig14292_v2_4_ORF2 CRC64: 25B63741D4C58BA7 LENGTH: 115 aa
noIPR
unintegrated
unintegrated
seg [30-40]? NA seg seg seg
SEQUENCE: RO454_contig14292_v2_6_ORF2 CRC64: 990EB289B3383F94 LENGTH: 72 aa
InterPro
IPR007087
Domain
Zinc finger, C2H2-type
PS00028 [17-38]? NA PS00028 ZINC_FINGER_C2H2_1 ZINC_FINGER_C2H2_1
SEQUENCE: RO454_contig14292_v2_6_ORF3 CRC64: 7BF69068B427AD0B LENGTH: 69 aa
No hits reported.
SEQUENCE: RO454_contig14292_v2_6_ORF4 CRC64: FD138DB444C2251F LENGTH: 51 aa
noIPR
unintegrated
unintegrated
seg [28-39]? NA seg seg seg
SEQUENCE: RO454_contig14292_v2_1_ORF2 CRC64: 6BF6F9D00FD64109 LENGTH: 205 aa
InterPro
IPR000814
Family
TATA-box binding
PANTHERPTHR10126TATA-BOX BINDING PROTEIN
 3.5e-136 [37-204]T       
PFAMPF00352TBP
 2.6e-38 [25-110]T   4.3e-41 [115-201]T     
PROSITEPS00351TFIID
 NA [57-106]?   NA [148-197]T     
Parent no parent
Children IPR015445
Found in no entries
Contains IPR012294 IPR012295
GO terms Molecular Function: DNA binding (GO:0003677)
Molecular Function: RNA polymerase II transcription factor activity (GO:0003702)
Biological Process: transcription initiation from RNA polymerase II promoter (GO:0006367)
InterPro
IPR012294
Domain
Transcription factor TFIID, C-terminal/DNA glycosylase, N-terminal
SUPERFAMILYSSF55945TATA-box binding protein-like
 7.4e-33 [24-111]T   6.8e-32 [114-202]T     
Parent no parent
Children IPR010316 IPR012904
Found in IPR000814 IPR012295 IPR015445
Contains no entries
GO terms Molecular Function: DNA binding (GO:0003677)
InterPro
IPR012295
Domain
Beta2-adaptin/TATA-box binding, C-terminal
GENE3DG3DSA:3.30.310.10no description
 5.9e-25 [29-109]T   1.1e-31 [110-205]T     
Parent no parent
Children IPR015151
Found in IPR000814 IPR015445
Contains IPR012294
GO terms Molecular Function: binding (GO:0005488)
noIPR
unintegrated
unintegrated
HAMAPMF_00408TBP_MF_00408
 27.395 [24-203]T       
Parent no parent
Children no children
Found in no entries
Contains no entries
GO terms none
SEQUENCE: RO454_contig14292_v2_2_ORF2 CRC64: C706D11B4838025C LENGTH: 96 aa
No hits reported.
SEQUENCE: RO454_contig14292_v2_4_ORF1 CRC64: DD4E044B78E4D78E LENGTH: 108 aa
No hits reported.
SEQUENCE: RO454_contig14292_v2_4_ORF2 CRC64: 25B63741D4C58BA7 LENGTH: 115 aa
noIPR
unintegrated
unintegrated
SEGseg seg
 NA [30-40]?       
Parent no parent
Children no children
Found in no entries
Contains no entries
GO terms none
SEQUENCE: RO454_contig14292_v2_6_ORF2 CRC64: 990EB289B3383F94 LENGTH: 72 aa
InterPro
IPR007087
Domain
Zinc finger, C2H2-type
PROSITEPS00028ZINC_FINGER_C2H2_1
 NA [17-38]?       
Parent IPR015880
Children no children
Found in IPR004595 IPR009170 IPR013087 IPR016378 IPR016608 IPR016766 IPR017083 IPR017085 IPR017086 IPR017114 IPR017124 IPR017125 IPR017126
Contains IPR007086
GO terms Cellular Component: intracellular (GO:0005622)
Molecular Function: zinc ion binding (GO:0008270)
SEQUENCE: RO454_contig14292_v2_6_ORF3 CRC64: 7BF69068B427AD0B LENGTH: 69 aa
No hits reported.
SEQUENCE: RO454_contig14292_v2_6_ORF4 CRC64: FD138DB444C2251F LENGTH: 51 aa
noIPR
unintegrated
unintegrated
SEGseg seg
 NA [28-39]?       
Parent no parent
Children no children
Found in no entries
Contains no entries
GO terms none

Blast Hits to Uniprot

Analysis Date: 11-18-2009 (Blast: RO454_v2_uniprot)
Best 10 Hits Shown | Show Best 25 Hits | Show All Hits
Note: Click a description for more details.
Match Name E value Identity
TBP_SOYBN9.2866e-10496.52%
TATA-box-binding protein OS=Glycine max GN=TBP1 PE=2 SV=1
HSP 1 
Score: 380.563 bits (976), Expect = 9.2866e-104
Identity = 194/201 (96.52%), Postives = 197/201 (98.01%), Query Frame = 1
Query:   76 MAEQGLGGRSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIXLTGAKVRDETYTAFENIYPVLTEFRKNQQ 678
            MA+QGL G SQPVDL+KHPSGIVPTLQNIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIR+PKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKI LTGAKVRDETYTAFENIYPVLTEFRKNQQ
Sbjct:    1 MADQGLEG-SQPVDLQKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ 200

TBP_SOLTU9.2866e-10496.52%
TATA-box-binding protein OS=Solanum tuberosum GN=TBP PE=2 SV=1
HSP 1 
Score: 380.563 bits (976), Expect = 9.2866e-104
Identity = 194/201 (96.52%), Postives = 197/201 (98.01%), Query Frame = 1
Query:   76 MAEQGLGGRSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIXLTGAKVRDETYTAFENIYPVLTEFRKNQQ 678
            MA+QGL G SQPVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAY+HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKI +TGAKVRDETYTAFENIYPVLTEFRKNQQ
Sbjct:    1 MADQGLEG-SQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYAHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKNQQ 200

TBP_MESCR3.5289e-10397.01%
TATA-box-binding protein OS=Mesembryanthemum crystallinum PE=2 SV=1
HSP 1 
Score: 378.637 bits (971), Expect = 3.5289e-103
Identity = 195/201 (97.01%), Postives = 196/201 (97.51%), Query Frame = 1
Query:   76 MAEQGLGGRSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIXLTGAKVRDETYTAFENIYPVLTEFRKNQQ 678
            MAEQGL G SQPVD  KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKI LTGAKVR+ETYTAFENIYPVLTEFRKNQQ
Sbjct:    1 MAEQGLEG-SQPVDPIKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLTEFRKNQQ 200

Q9ZTX5_PHAVU4.60889e-10396.02%
TATA-box binding protein OS=Phaseolus vulgaris GN=PVTBP1 PE=2 SV=1
HSP 1 
Score: 378.252 bits (970), Expect = 4.60889e-103
Identity = 193/201 (96.02%), Postives = 196/201 (97.51%), Query Frame = 1
Query:   76 MAEQGLGGRSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIXLTGAKVRDETYTAFENIYPVLTEFRKNQQ 678
            MA+QGL G  QPVDL++HPSGIVPTLQNIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKI LTGAKVRDETYTAFENIYPVLTEFRKNQQ
Sbjct:    1 MADQGLEG-IQPVDLQRHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ 200

B7FMY1_MEDTR7.86158e-10396.02%
Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1
HSP 1 
Score: 377.481 bits (968), Expect = 7.86158e-103
Identity = 193/201 (96.02%), Postives = 196/201 (97.51%), Query Frame = 1
Query:   76 MAEQGLGGRSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIXLTGAKVRDETYTAFENIYPVLTEFRKNQQ 678
            MA+QGL G SQPVDL KHPSGIVPTLQNIVSTVNLDCKL+LK+IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSE QSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKI LTGAKVRDETYTAFENIYPVLTEFRKNQQ
Sbjct:    1 MADQGLEG-SQPVDLSKHPSGIVPTLQNIVSTVNLDCKLELKSIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEVQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ 200

Q9SAU1_PHAVU1.02675e-10296.02%
TATA-box binding protein OS=Phaseolus vulgaris GN=PVTBP2 PE=2 SV=1
HSP 1 
Score: 377.096 bits (967), Expect = 1.02675e-102
Identity = 193/201 (96.02%), Postives = 196/201 (97.51%), Query Frame = 1
Query:   76 MAEQGLGGRSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIXLTGAKVRDETYTAFENIYPVLTEFRKNQQ 678
            MA+Q L G +QPVDL+KHPSGIVPTLQNIVSTVNLDCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKI LTGAKVRDETYTAFENIYPVLTEFRKNQQ
Sbjct:    1 MADQVLEG-NQPVDLQKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ 200

C5WQG2_SORBI1.34098e-10296.52%
Putative uncharacterized protein Sb01g012880 OS=Sorghum bicolor GN=Sb01g012880 PE=4 SV=1
HSP 1 
Score: 376.711 bits (966), Expect = 1.34098e-102
Identity = 194/201 (96.52%), Postives = 195/201 (97.01%), Query Frame = 1
Query:   76 MAEQGLGGRSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIXLTGAKVRDETYTAFENIYPVLTEFRKNQQ 678
            MAE GL G SQPVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKI LTGAKVR+ETYTAFENIYPVLTEFRK QQ
Sbjct:    1 MAEPGLEG-SQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLTEFRKVQQ 200

A7P0B8_VITVI2.28737e-10295.52%
Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024845001 PE=4 SV=1
HSP 1 
Score: 375.941 bits (964), Expect = 2.28737e-102
Identity = 192/201 (95.52%), Postives = 195/201 (97.01%), Query Frame = 1
Query:   76 MAEQGLGGRSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIXLTGAKVRDETYTAFENIYPVLTEFRKNQQ 678
            MA+Q L G SQPVDL KHPSGI+PTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIR+PKTTALIFASGKMVCTGAKSE QSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKI LTGAKVRDETYTAFENIYPVLTEFRKNQQ
Sbjct:    1 MADQVLEG-SQPVDLSKHPSGIIPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVCTGAKSEHQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ 200

B7FMV6_MEDTR2.9874e-10295.02%
Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1
HSP 1 
Score: 375.555 bits (963), Expect = 2.9874e-102
Identity = 191/201 (95.02%), Postives = 195/201 (97.01%), Query Frame = 1
Query:   76 MAEQGLGGRSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIXLTGAKVRDETYTAFENIYPVLTEFRKNQQ 678
            MA+QGL G SQPVDL KHPSGIVPTLQNIVSTVNLDCKL+LK+IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSE QSKLAARKYARIIQKLGFPAKFKDFKIQN+VGSCDVKFPIRLEGLAYSHG FSSYEPELFPGLIYRMKQPKIVLLIFVSGKI LTGAKVRDETYTAFENIYPVLTEFRKNQQ
Sbjct:    1 MADQGLEG-SQPVDLSKHPSGIVPTLQNIVSTVNLDCKLELKSIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEVQSKLAARKYARIIQKLGFPAKFKDFKIQNVVGSCDVKFPIRLEGLAYSHGTFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ 200

B6SGQ4_MAIZE3.90166e-10296.02%
Putative uncharacterized protein OS=Zea mays PE=2 SV=1
HSP 1 
Score: 375.17 bits (962), Expect = 3.90166e-102
Identity = 193/201 (96.02%), Postives = 195/201 (97.01%), Query Frame = 1
Query:   76 MAEQGLGGRSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIXLTGAKVRDETYTAFENIYPVLTEFRKNQQ 678
            MAE GL G SQPVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKI LTGAKVR+ETYTAFENIYPVL+EFRK QQ
Sbjct:    1 MAEPGLEG-SQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLSEFRKIQQ 200

Blast Hits to Contigs V2 AC454

Analysis Date: 11-18-2009 (Blast: RO454_contigs_v2_vs_AC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
AC454_contig25402_v23.14731e-10197.76%
AC454_contig25402_v2
HSP 1 
Score: 309.442 bits (669), Expect = 3.14731e-101
Identity = 131/134 (97.76%), Postives = 134/134 (100.00%), Query Frame = 1
Query:  103 SQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 504
            SQPVDLKKHPSGI+PTLQNIVSTVNL+CKLDLK+IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS
Sbjct:   82 SQPVDLKKHPSGIIPTLQNIVSTVNLECKLDLKSIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 483

HSP 2 
Score: 72.5479 bits (152), Expect = 3.14731e-101
Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 2
Query:    2 DHQTLAQTTSN*RESKRRIYKKRKEWQNRD 91
            DHQTLAQTTSN*RESKRRIYKKRKEW+NRD
Sbjct:  492 DHQTLAQTTSN*RESKRRIYKKRKEWRNRD 581

HSP 3 
Score: 23.0613 bits (44), Expect = 3.14731e-101
Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 1
Query:  592 LTGAKVRDETYT 627
            ++  KVRDETYT
Sbjct:    3 ISNLKVRDETYT 38

HSP 4 
Score: 291.572 bits (630), Expect = 9.5351e-93
Identity = 126/136 (92.65%), Postives = 127/136 (93.38%), Query Frame = 2
Query:   98 EGANQLISRSTLLGLSLPFRTLCXQ*IWTANWILRPLHFKLVMQNTIPSVLLL*L*G*GNQKPQP*XLLLGRWFVLELRVNNSXSWQHGSMLELYRSLVFPLNSRILRFRT*LVHVMLNSPSGLKDWHIPMVPFLV 505
            +GANQLISRSTLLGLSLPFRTLC Q*IW ANWIL PLHFKLVMQNTIPSVLL *L*G*GNQKPQP* LLLGRWF LELRVNNS SWQHGSMLELYRSLVF LNSRILRFRT*LVHVMLNSPSGLK WHIPMVPFLV
Sbjct:   81 KGANQLISRSTLLGLSLPFRTLCLQ*IWNANWILSPLHFKLVMQNTIPSVLLP*L*G*GNQKPQP*FLLLGRWFALELRVNNSRSWQHGSMLELYRSLVFQLNSRILRFRT*LVHVMLNSPSGLKGWHIPMVPFLV 488

HSP 5 
Score: 62.4673 bits (130), Expect = 9.5351e-93
Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 3
Query:    3 IIKP*HRQHQIKERVKEEFIRKERNGRTGI 92
            IIKP*HRQ QI+ERVKEEFIRKERNG TGI
Sbjct:  491 IIKP*HRQLQIEERVKEEFIRKERNGGTGI 580

HSP 6 
Score: 22.6031 bits (43), Expect = 9.5351e-93
Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  600 S*GER*DLYS 629
            S*GER*DLYS
Sbjct:    1 S*GER*DLYS 30

HSP 7 
Score: 293.404 bits (634), Expect = 1.09536e-87
Identity = 118/135 (87.41%), Postives = 118/135 (87.41%), Query Frame = -2
Query:  100 TRKGTMGICQSFKPDGEFNIT*TNYVLNLKILEFSGKTKLLYNSSILPCCQXXXXXXXXXXTNHLPRSKXQGCGFWFPYPHNYSSKTLGIVFCITSLKCNGLKIQFAVQIYCXHNVLKGRDNPRRVLLEINWLAP 504
            TRKGTMGICQ FKPDGEFNIT*TNYVLNLKILEFS KTKLLYNSSILPCCQ           NHLPRSK QGCGFWFPYPHNY SKTLGIVFCITSLKCNGLKIQFA QIYC HNVLKGRDNPRRVLLEINWLAP
Sbjct:   82 TRKGTMGICQPFKPDGEFNIT*TNYVLNLKILEFSWKTKLLYNSSILPCCQLRLLFTLSSSANHLPRSKNQGCGFWFPYPHNYGSKTLGIVFCITSLKCNGLKIQFAFQIYCRHNVLKGRDNPRRVLLEINWLAP 486

HSP 8 
Score: 43.2225 bits (88), Expect = 1.09536e-87
Identity = 20/33 (60.61%), Postives = 20/33 (60.61%), Query Frame = -3
Query:    3 LPPNPCSAIPXXXXXXXXXXXFNLMLSVLGFDD 101
            LP NPCSAIP           FNL LSVLGFDD
Sbjct:  482 LPSNPCSAIPFFSYKFFFYSLFNLKLSVLGFDD 580

HSP 9 
Score: 23.0613 bits (44), Expect = 1.09536e-87
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = -1
Query:  602 LYRSHLSP* 628
            LYRSHLSP*
Sbjct:    2 LYRSHLSP* 28

HSP 10 
Score: 281.949 bits (609), Expect = 2.36513e-79
Identity = 124/135 (91.85%), Postives = 126/135 (93.33%), Query Frame = -1
Query:  101 N*KRHHGNMPVLQA*WGI*HHMNQLCSES*NP*I*RENQASV*FEHTSVLPTXTVVHS*LQYKPSSQKQXSRLWFLVPLSS*LQQQNAWDCILHYELEVQWP*DPICSPNLLXTQCSEG*GQSQKGAS*DQLVGS 505
            +*KRHHGNMP LQA*WGI*HHMNQLCSES*NP*I* ENQASV*FEHTSVLPT TVVHS*LQ KPSSQKQ SRLWFLVPLSS*L+QQNAWDCILHYELEVQW *DPIC PNLL TQCSEG*G SQKGAS*DQLVGS
Sbjct:   81 H*KRHHGNMPALQA*WGI*HHMNQLCSES*NP*I*LENQASV*FEHTSVLPTSTVVHS*LQCKPSSQKQKSRLWFLVPLSS*LRQQNAWDCILHYELEVQWT*DPICIPNLL*TQCSEG*G*SQKGAS*DQLVGS 485

HSP 11 
Score: 27.1852 bits (53), Expect = 2.36513e-79
Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = -1
Query:   56 IPVLPFLSFLIN 91
            IPV PFLSFLIN
Sbjct:  492 IPVPPFLSFLIN 527

HSP 12 
Score: 22.6031 bits (43), Expect = 2.36513e-79
Identity = 8/8 (100.00%), Postives = 8/8 (100.00%), Query Frame = -2
Query:  604 CIGLISHL 627
            CIGLISHL
Sbjct:    3 CIGLISHL 26

HSP 13 
Score: 286.989 bits (620), Expect = 5.93049e-79
Identity = 115/135 (85.19%), Postives = 118/135 (87.41%), Query Frame = 3
Query:   99 KEPTS*SQEAPFWDCPYPSEHCVXSKFGLQIGS*GHCTXXXXCRIQSQAFCCCNYEDKGTKNHSLDXCFWEDGLYWS*EXXXXXXGSTEVCSNYTEAWFSR*IQGF*DSEHSWFM*C*IPHQA*RTGIFPWCLF* 503
            +EPTS*SQEAPFWD PYPSEHCV SKFG+QIGS* HCT    CRIQSQAFCC NYEDKGTKNHSLD CFWEDGL+WS*E      GSTEVCSNYTEAWFS *IQGF*DSEHSWFM*C*IPHQA*R GIFPWCLF*
Sbjct:   83 REPTS*SQEAPFWDYPYPSEHCVYSKFGMQIGS*VHCTSSS*CRIQSQAFCCRNYEDKGTKNHSLDFCFWEDGLHWS*E*TTVEVGSTEVCSNYTEAWFSS*IQGF*DSEHSWFM*C*IPHQA*RAGIFPWCLF* 487

HSP 14 
Score: 24.436 bits (47), Expect = 5.93049e-79
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 1
Query:    1 RSSNPSTDN 27
            RSSNPSTDN
Sbjct:  556 RSSNPSTDN 582

HSP 15 
Score: 211.843 bits (456), Expect = 3.59029e-70
Identity = 90/91 (98.90%), Postives = 90/91 (98.90%), Query Frame = -3
Query:  231 LEKAPWEYASPSSLMGNLTSHEPTMF*ILKSLNLAGKPSFCIIRAYFRAANFDCCSLLAPVQTIFPEAXIKAVVFGSLILIITAAKRLGLY 503
            LEKAPWEYASPSSLMGNLTSHEPTMF*ILKSLNLAGKPSFCIIRAYFRAANFDCCSLLAPVQTIFPEA IKAVVFGSLILIITAAKRLGLY
Sbjct:   83 LEKAPWEYASPSSLMGNLTSHEPTMF*ILKSLNLAGKPSFCIIRAYFRAANFDCCSLLAPVQTIFPEAKIKAVVFGSLILIITAAKRLGLY 355

HSP 16 
Score: 70.2568 bits (147), Expect = 3.59029e-70
Identity = 28/30 (93.33%), Postives = 28/30 (93.33%), Query Frame = -3
Query:  102 NLQSKFTVDTMF*RVGTIPEGCFLRSTGWL 191
            NL SKFTVDTMF*RVG IPEGCFLRSTGWL
Sbjct:  395 NLHSKFTVDTMF*RVGIIPEGCFLRSTGWL 484

AC454_contig30197_v28.44188e-9796.10%
AC454_contig30197_v2
HSP 1 
Score: 186.642 bits (401), Expect = 8.44188e-97
Identity = 74/77 (96.10%), Postives = 74/77 (96.10%), Query Frame = -3
Query:  669 NNSVKYMVLLPLLHQSQEN*MQTLNTSFLTSKPENRCTICFYIYSSIQAQQLHCQVFHLLTFANKIWLLFPQNHCWF 899
            NNSVKYMVLLPLLHQSQEN MQTLNTSFLT KPENRCTICFYIYSSIQAQQLHCQVFHL TFANKIWLLFPQNHCWF
Sbjct:  230 NNSVKYMVLLPLLHQSQENQMQTLNTSFLT*KPENRCTICFYIYSSIQAQQLHCQVFHLRTFANKIWLLFPQNHCWF 460

HSP 2 
Score: 184.351 bits (396), Expect = 8.44188e-97
Identity = 73/82 (89.02%), Postives = 75/82 (91.46%), Query Frame = -2
Query:  439 KSLLVFPELCKHRVYVLKGCIGLISHLSSCXXDFS*HENKQHNLWLFHAIDQPWEQLWLITRKGTMGICQSFKPDGEFNIT* 684
            K +  FPEL KHRVYVLKGCIGLISHLSSC  DFS*H+NKQHNLWLFHAIDQPWEQLWLITRKGTMGICQ FKPDGEFNIT*
Sbjct:    1 KIIAGFPELRKHRVYVLKGCIGLISHLSSCKNDFS*HKNKQHNLWLFHAIDQPWEQLWLITRKGTMGICQPFKPDGEFNIT* 246

HSP 3 
Score: 182.06 bits (391), Expect = 4.31247e-93
Identity = 76/79 (96.20%), Postives = 78/79 (98.73%), Query Frame = 1
Query:  664 RKNQQ*FCGKRSQILFAKVRRWNTWQCSC*AWIEL*I*KQIVHRFSGFEVKKDVFSVCI*FSWL*CSSGRRTIYFTELL 900
            ++NQQ*FCGKRSQILFAKVRRWNTWQCSC*AWIEL*I*KQIVHRFSGF VKKDVFSVCI*FSWL*CSSGRRTIYFTELL
Sbjct:  225 QENQQ*FCGKRSQILFAKVRRWNTWQCSC*AWIEL*I*KQIVHRFSGF*VKKDVFSVCI*FSWL*CSSGRRTIYFTELL 461

HSP 4 
Score: 176.561 bits (379), Expect = 4.31247e-93
Identity = 73/77 (94.81%), Postives = 74/77 (96.10%), Query Frame = 2
Query:  440 HVMLNSPSGLKDWHIPMVPFLVMSQSCSQG*SIA*NNQRLCCLFSCQEKSFXQELR*EMRPIQPLRTYTRCLQSSGK 670
            HVMLNSPSGLK WHIPMVPFLVMSQSCSQG*SIA*NNQRLCCLF CQEKSF QELR*EMRPIQPLRTYTRCL+SSGK
Sbjct:    2 HVMLNSPSGLKGWHIPMVPFLVMSQSCSQG*SIA*NNQRLCCLFLCQEKSFLQELR*EMRPIQPLRTYTRCLRSSGK 232

HSP 5 
Score: 181.143 bits (389), Expect = 5.41207e-92
Identity = 74/78 (94.87%), Postives = 74/78 (94.87%), Query Frame = -2
Query:  667 QQLCKIYGSSPTTTSEPRKLNADTEHIFFNFKTREPMHNLLLYLQFNPGSAATLPGIPPPNFCKQDLASLPTKSLLVF 900
            QQLCKIYGSS TTTSEPRK NADTEHIFFN KTREPMHNLLLYLQFNPGSAATLPGIP PNFCKQDLASLPTKSLLVF
Sbjct:  228 QQLCKIYGSSTTTTSEPRKSNADTEHIFFNLKTREPMHNLLLYLQFNPGSAATLPGIPSPNFCKQDLASLPTKSLLVF 461

HSP 6 
Score: 173.812 bits (373), Expect = 5.41207e-92
Identity = 76/83 (91.57%), Postives = 76/83 (91.57%), Query Frame = -3
Query:  441 PQNHCWFFLNSVSTGYMFSKAV*VSSLTLAPVRXIFPDTKISSTIFGCFMR*INPGNSSGS*LEKAPWEYASPSSLMGNLTSH 689
            P      FLNSVSTGYMFSKAV*VSSLTLAPVR IFPDTKISSTIFGCFMR*INPGNSSGS*LEKAPWEYASPSSLMGNLTSH
Sbjct:    3 PTKSLLVFLNSVSTGYMFSKAV*VSSLTLAPVRTIFPDTKISSTIFGCFMR*INPGNSSGS*LEKAPWEYASPSSLMGNLTSH 251

HSP 7 
Score: 171.063 bits (367), Expect = 3.46132e-87
Identity = 74/78 (94.87%), Postives = 75/78 (96.15%), Query Frame = -1
Query:  668 STTL*NIWFFSHYYIRAKKIKCRH*THLF*LQNQRTDAQFAFIFTVQSRLSSYIARYSTS*LLQTRSGFSSHKIIAGF 901
            STTL*NIWFF HYYIRAKKIKCRH*THLF*L+NQRTDAQFAFIFTVQSRLSSYIARYS S LLQTRSGFSSHKIIAGF
Sbjct:  229 STTL*NIWFFYHYYIRAKKIKCRH*THLF*LKNQRTDAQFAFIFTVQSRLSSYIARYSISELLQTRSGFSSHKIIAGF 462

HSP 8 
Score: 167.855 bits (360), Expect = 3.46132e-87
Identity = 74/77 (96.10%), Postives = 75/77 (97.40%), Query Frame = -1
Query:  440 FS*TL*APGICSQRLYRSHLSP*LL*ERFFLTRK*AAQSLVVSCDRSTLGTALAHN*KRHHGNMPVLQA*WGI*HHM 670
            FS*T *APGICSQRLYRSHLSP*LL*ERFFLT+K*AAQSLVVSCDRSTLGTALAHN*KRHHGNMP LQA*WGI*HHM
Sbjct:    2 FS*TP*APGICSQRLYRSHLSP*LL*ERFFLTQK*AAQSLVVSCDRSTLGTALAHN*KRHHGNMPALQA*WGI*HHM 232

HSP 9 
Score: 174.728 bits (375), Expect = 3.16434e-86
Identity = 73/79 (92.41%), Postives = 75/79 (94.94%), Query Frame = 2
Query:  668 KTSNDFVGREARSCLQKLGGGIPGNVAAEPGLNCKYKSKLCIGSLVLKLKKMCSVSAFNFLGSDVVVGEEPYILQSC*K 904
            KTSNDFVGREARSCLQK G GIPGNVAAEPGLNCKYKSKLCIGSLV KLKKMCSVSAF+FLGSDVVV EEPYILQSC*+
Sbjct:  229 KTSNDFVGREARSCLQKFGDGIPGNVAAEPGLNCKYKSKLCIGSLVFKLKKMCSVSAFDFLGSDVVVVEEPYILQSC*Q 465

HSP 10 
Score: 160.982 bits (345), Expect = 3.16434e-86
Identity = 71/76 (93.42%), Postives = 71/76 (93.42%), Query Frame = 3
Query:  441 M*C*IPHQA*RTGIFPWCLF*L*ARAVPRVDLSHETTKDCAAYFRVRKNXSXRS*GER*DLYSL*EHIPGAYRVQE 668
            M*C*IPHQA*R GIFPWCLF*L*ARAVPRVDLSHETTKDCAAYF VRKN S RS*GER*DLYSL*EHIPGAY VQE
Sbjct:    3 M*C*IPHQA*RAGIFPWCLF*L*ARAVPRVDLSHETTKDCAAYFCVRKNRSYRS*GER*DLYSL*EHIPGAYGVQE 230

HSP 11 
Score: 169.23 bits (363), Expect = 4.78329e-50
Identity = 74/82 (90.24%), Postives = 76/82 (92.68%), Query Frame = 3
Query:  657 RVQEKPAMILWEEKPDLVCKS*EVEYLAM*LLSLD*TVNIKANCASVLWF*S*KRCVQCLHLIFLALM**WEKNHIFYRVVE 902
            R   KPAMILWEEKPDLVCKS E+EYLAM*LLSLD*TVNIKANCASVLWF S*KRCVQCLHLIFLALM**W KNHIFYRVV+
Sbjct:  218 RSSGKPAMILWEEKPDLVCKSSEMEYLAM*LLSLD*TVNIKANCASVLWFLS*KRCVQCLHLIFLALM**W*KNHIFYRVVD 463

HSP 12 
Score: 47.8046 bits (98), Expect = 4.78329e-50
Identity = 19/44 (43.18%), Postives = 28/44 (63.64%), Query Frame = 1
Query:  226 AEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLA 357
            + Y P+ F  +I R+++PK   LIF SGK+V TGAK   ++  A
Sbjct:   61 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTA 192

HSP 13 
Score: 188.016 bits (404), Expect = 4.2794e-48
Identity = 79/93 (84.95%), Postives = 82/93 (88.17%), Query Frame = 1
Query:  439 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIXLTGAKVRDETYTAFENIYPVLTEFRKNQQ*FCGKRSQILFAK 717
            SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKI LTGAKVRDETYTAFENIYPVLTEFRK    F G+ ++    K
Sbjct:    1 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKTSNDFVGREARSCLQK 279

AC454_contig27986_v27.4477e-11100.00%
AC454_contig27986_v2
HSP 1 
Score: 64.3001 bits (134), Expect = 7.4477e-11
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = -3
Query:  603 HCWFFLNSVSTGYMFSKAV*VSSLTL 680
            HCWFFLNSVSTGYMFSKAV*VSSLTL
Sbjct:  319 HCWFFLNSVSTGYMFSKAV*VSSLTL 396

Blast Hits to Contigs V2 CC454

Analysis Date: 11-18-2009 (Blast: RO454_contigs_v2_vs_CC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
CC454_contig1167_v2099.15%
CC454_contig1167_v2
HSP 1 
Score: 549.085 bits (1192), Expect = 0
Identity = 233/235 (99.15%), Postives = 234/235 (99.57%), Query Frame = 1
Query:  103 SQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIXLTGAKVRDETYTAFENIYPVLTEFRKNQQ*FCGKRSQILFAKVRRWNTWQCSC*AWIEL*I*KQIVHRFSGF 807
            SQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLK+IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKI LTGAKVRDETYTAFENIYPVLTEFRKNQQ*FCGKRSQILFAKVRRWNTWQCSC*AWIEL*I*KQIVHRFSGF
Sbjct:  308 SQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKSIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ*FCGKRSQILFAKVRRWNTWQCSC*AWIEL*I*KQIVHRFSGF 1012

HSP 2 
Score: 67.9658 bits (142), Expect = 0
Identity = 27/30 (90.00%), Postives = 29/30 (96.67%), Query Frame = 2
Query:    2 DHQTLAQTTSN*RESKRRIYKKRKEWQNRD 91
            DHQTLAQTTSN*RESKRRI+KKRK W+NRD
Sbjct:  210 DHQTLAQTTSN*RESKRRIFKKRKXWRNRD 299

HSP 3 
Score: 67.9658 bits (142), Expect = 0
Identity = 29/33 (87.88%), Postives = 31/33 (93.94%), Query Frame = 2
Query:  806 LKLKKMCSVSAFNFLGSDVVVGEEPYILQSC*K 904
            LKLKKM S SAF+FLGSDVVVGEEPYILQSC*+
Sbjct: 1012 LKLKKMXSXSAFDFLGSDVVVGEEPYILQSC*R 1110

HSP 4 
Score: 520.676 bits (1130), Expect = 5.06293e-174
Identity = 223/241 (92.53%), Postives = 226/241 (93.78%), Query Frame = 2
Query:   98 EGANQLISRSTLLGLSLPFRTLCXQ*IWTANWILRPLHFKLVMQNTIPSVLLL*L*G*GNQKPQP*XLLLGRWFVLELRVNNSXSWQHGSMLELYRSLVFPLNSRILRFRT*LVHVMLNSPSGLKDWHIPMVPFLVMSQSCSQG*SIA*NNQRLCCLFSCQEKSFXQELR*EMRPIQPLRTYTRCLQSSGKTSNDFVGREARSCLQKLGGGIPGNVAAEPGLNCKYKSKLCIGSLVLKLKK 820
            +GANQLI RSTLLGLSLPFRTLC Q*IWTANWIL PLHFKLVMQNTIPSVLL *L*G*GNQKPQP* LLLGRWF LELRVNNS SWQHGSMLELYRSLVF LNSRILRFRT*LVHVMLNSPSGLKDWHIPMVPFLVMSQSCSQG*SIA* NQRLCCLF CQEKSF QELR*EMRPIQPLRTYT CL+SSGKTSNDFVGREARSCLQK G GIPGNVAAEPGLNCKYKSKLCIGSLV K+KK
Sbjct:  303 KGANQLIXRSTLLGLSLPFRTLCLQ*IWTANWILSPLHFKLVMQNTIPSVLLP*L*G*GNQKPQP*FLLLGRWFALELRVNNSRSWQHGSMLELYRSLVFQLNSRILRFRT*LVHVMLNSPSGLKDWHIPMVPFLVMSQSCSQG*SIA*XNQRLCCLFLCQEKSFLQELR*EMRPIQPLRTYTXCLRSSGKTSNDFVGREARSCLQKFGDGIPGNVAAEPGLNCKYKSKLCIGSLVFKVKK 1025

HSP 5 
Score: 67.0494 bits (140), Expect = 5.06293e-174
Identity = 29/33 (87.88%), Postives = 31/33 (93.94%), Query Frame = 3
Query:  804 F*S*KRCVQCLHLIFLALM**WEKNHIFYRVVE 902
            F*S*KR VQCLHLI LALM**WE+NHIFYRVV+
Sbjct: 1010 F*S*KRXVQCLHLISLALM**WERNHIFYRVVD 1108

HSP 6 
Score: 61.5509 bits (128), Expect = 5.06293e-174
Identity = 26/30 (86.67%), Postives = 28/30 (93.33%), Query Frame = 3
Query:    3 IIKP*HRQHQIKERVKEEFIRKERNGRTGI 92
            IIKP*HRQ QI+ERVKEEF+RKERNG TGI
Sbjct:  211 IIKP*HRQLQIEERVKEEFLRKERNGGTGI 300

HSP 7 
Score: 530.298 bits (1151), Expect = 4.50135e-169
Identity = 214/240 (89.17%), Postives = 215/240 (89.58%), Query Frame = -2
Query:  100 FFNFKTREPMHNLLLYLQFNPGSAATLPGIPPPNFCKQDLASLPTKSLLVFPELCKHRVYVLKGCIGLISHLSSCXXDFS*HENKQHNLWLFHAIDQPWEQLWLITRKGTMGICQSFKPDGEFNIT*TNYVLNLKILEFSGKTKLLYNSSILPCCQXXXXXXXXXXTNHLPRSKXQGCGFWFPYPHNYSSKTLGIVFCITSLKCNGLKIQFAVQIYCXHNVLKGRDNPRRVLLEINWLAP 819
            F   KTREPMHNLLLYLQFNPGSAATLPGIP PNFCKQDLASLPTKSLLVFPEL KH VYVLKGCIGLISHLSSC  DFS*H+NKQHNLWL HAIDQPWEQLWLITRKGTMGICQSFKPDGEFNIT*TNYVLNLKILEFS KTKLLYNSSILPCCQ           NHLPRSK QGCGFWFPYPHNY SKTLGIVFCITSLKCNGLKIQFAVQIYC HNVLKGRDNPRRVLL INWLAP
Sbjct:  305 FLTLKTREPMHNLLLYLQFNPGSAATLPGIPSPNFCKQDLASLPTKSLLVFPELRKHXVYVLKGCIGLISHLSSCKNDFS*HKNKQHNLWLXHAIDQPWEQLWLITRKGTMGICQSFKPDGEFNIT*TNYVLNLKILEFSWKTKLLYNSSILPCCQLRLLFTLSSSANHLPRSKNQGCGFWFPYPHNYGSKTLGIVFCITSLKCNGLKIQFAVQIYCRHNVLKGRDNPRRVLLXINWLAP 1024

HSP 8 
Score: 72.5479 bits (152), Expect = 4.50135e-169
Identity = 29/34 (85.29%), Postives = 30/34 (88.24%), Query Frame = -2
Query:  799 QQLCKIYGSSPTTTSEPRKLNADTEHIFFNFKTR 900
            QQLCKIYGSSPTTTSEPRK NAD E IFFNFK +
Sbjct: 1005 QQLCKIYGSSPTTTSEPRKSNADXEXIFFNFKNQ 1106

HSP 9 
Score: 25.3524 bits (49), Expect = 4.50135e-169
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = -3
Query:    3 NLMLSVLGFDD 35
            NL LSVLGFDD
Sbjct:  211 NLKLSVLGFDD 243

HSP 10 
Score: 23.9778 bits (46), Expect = 4.50135e-169
Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = -1
Query:   56 IPVLPFLSFLIN 91
            IPV PFLSFL N
Sbjct:  264 IPVPPFLSFLKN 299

HSP 11 
Score: 451.028 bits (978), Expect = 6.70149e-160
Identity = 189/192 (98.44%), Postives = 189/192 (98.44%), Query Frame = -3
Query:  231 KPENRCTICFYIYSSIQAQQLHCQVFHLLTFANKIWLLFPQNHCWFFLNSVSTGYMFSKAV*VSSLTLAPVRXIFPDTKISSTIFGCFMR*INPGNSSGS*LEKAPWEYASPSSLMGNLTSHEPTMF*ILKSLNLAGKPSFCIIRAYFRAANFDCCSLLAPVQTIFPEAXIKAVVFGSLILIITAAKRLGLY 806
            KPENRCTICFYIYSSIQAQQLHCQVFHL TFANKIWLLFPQNHCWFFLNSVSTGYMFSKAV*VSSLTLAPVR IFPDTKISSTIFGCFMR*INPGNSSGS*LEKAPWEYASPSSLMGNLTSHEPTMF*ILKSLNLAGKPSFCIIRAYFRAANFDCCSLLAPVQTIFPEA IKAVVFGSLILIITAAKRLGLY
Sbjct:  436 KPENRCTICFYIYSSIQAQQLHCQVFHLRTFANKIWLLFPQNHCWFFLNSVSTGYMFSKAV*VSSLTLAPVRTIFPDTKISSTIFGCFMR*INPGNSSGS*LEKAPWEYASPSSLMGNLTSHEPTMF*ILKSLNLAGKPSFCIIRAYFRAANFDCCSLLAPVQTIFPEAKIKAVVFGSLILIITAAKRLGLY 1011

HSP 12 
Score: 75.2971 bits (158), Expect = 6.70149e-160
Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = -3
Query:  102 NLQSKFTVDTMF*RVGTIPEGCFLRSTGWL 191
            NLQSKFTVDTMF*RVGTIPEGCFLRSTGWL
Sbjct:  307 NLQSKFTVDTMF*RVGTIPEGCFLRSTGWL 396

HSP 13 
Score: 72.0897 bits (151), Expect = 6.70149e-160
Identity = 29/31 (93.55%), Postives = 30/31 (96.77%), Query Frame = -1
Query:  809 STTL*NIWFFSHYYIRAKKIKCRH*THLF*L 901
            STTL*NIWF SHYYIRAK+IKCRH*THLF*L
Sbjct: 1015 STTL*NIWFLSHYYIRAKEIKCRH*THLF*L 1107

HSP 14 
Score: 23.0613 bits (44), Expect = 6.70149e-160
Identity = 8/9 (88.89%), Postives = 8/9 (88.89%), Query Frame = -3
Query:   75 LPPNPCSAI 101
            LP NPCSAI
Sbjct:  283 LPSNPCSAI 309

HSP 15 
Score: 498.224 bits (1081), Expect = 6.04059e-155
Identity = 210/236 (88.98%), Postives = 213/236 (90.25%), Query Frame = 3
Query:   99 KEPTS*SQEAPFWDCPYPSEHCVXSKFGLQIGS*GHCTXXXXCRIQSQAFCCCNYEDKGTKNHSLDXCFWEDGLYWS*EXXXXXXGSTEVCSNYTEAWFSR*IQGF*DSEHSWFM*C*IPHQA*RTGIFPWCLF*L*ARAVPRVDLSHETTKDCAAYFRVRKNXSXRS*GER*DLYSL*EHIPGAYRVQEKPAMILWEEKPDLVCKS*EVEYLAM*LLSLD*TVNIKANCASVLWF 806
            +EPTS*S EAPFWDCPYPSEHCV SKFGLQIGS* HCT    CRIQSQAFCC NYEDKGTKNHSLD CFWEDGL+WS*E      GSTEVCSNYTEAWFS *IQGF*DSEHSWFM*C*IPHQA*RTGIFPWCLF*L*ARAVPRVDLSHE TKDCAAYF VRKN S RS*GER*DLYSL*EHIP AY VQEKPAMILWEEKPDLVCKS E+EYLAM*LLSLD*TVNIKANCASVLWF
Sbjct:  304 REPTS*SXEAPFWDCPYPSEHCVYSKFGLQIGS*VHCTSSS*CRIQSQAFCCRNYEDKGTKNHSLDFCFWEDGLHWS*E*TTVEVGSTEVCSNYTEAWFSS*IQGF*DSEHSWFM*C*IPHQA*RTGIFPWCLF*L*ARAVPRVDLSHEXTKDCAAYFCVRKNRSYRS*GER*DLYSL*EHIPXAYGVQEKPAMILWEEKPDLVCKSSEMEYLAM*LLSLD*TVNIKANCASVLWF 1011

HSP 16 
Score: 65.2165 bits (136), Expect = 6.04059e-155
Identity = 27/32 (84.38%), Postives = 28/32 (87.50%), Query Frame = 1
Query:  805 FEVKKDVFSVCI*FSWL*CSSGRRTIYFTELL 900
            F+VKKD F VCI*F WL*CSSGR TIYFTELL
Sbjct: 1011 FKVKKDXFXVCI*FPWL*CSSGRGTIYFTELL 1106

HSP 17 
Score: 22.1449 bits (42), Expect = 6.04059e-155
Identity = 8/8 (100.00%), Postives = 8/8 (100.00%), Query Frame = 1
Query:    4 SSNPSTDN 27
            SSNPSTDN
Sbjct:  212 SSNPSTDN 235

HSP 18 
Score: 495.016 bits (1074), Expect = 8.71283e-152
Identity = 223/239 (93.31%), Postives = 226/239 (94.56%), Query Frame = -1
Query:  101 F*LQNQRTDAQFAFIFTVQSRLSSYIARYSTS*LLQTRSGFSSHKIIAGFS*TL*APGICSQRLYRSHLSP*LL*ERFFLTRK*AAQSLVVSCDRSTLGTALAHN*KRHHGNMPVLQA*WGI*HHMNQLCSES*NP*I*RENQASV*FEHTSVLPTXTVVHS*LQYKPSSQKQXSRLWFLVPLSS*LQQQNAWDCILHYELEVQWP*DPICSPNLLXTQCSEG*GQSQKGAS*DQLVGS 817
            F  +NQRTDAQFAFIFTVQSRLSSYIARYS S LLQTRSGFSSHKIIAGFS*T *A GICSQRLYRSHLSP*LL*ERFFLT+K*AAQSLV SCDRSTLGTALAHN*KRHHGNMPVLQA*WGI*HHMNQLCSES*NP*I* ENQASV*FEHTSVLPT TVVHS*LQ KPSSQKQ SRLWFLVPLSS*L+QQNAWDCILHYELEVQW *DPICSPNLL TQCSEG*GQSQKGAS*DQLVGS
Sbjct:  306 FNFKNQRTDAQFAFIFTVQSRLSSYIARYSISELLQTRSGFSSHKIIAGFS*TP*AXGICSQRLYRSHLSP*LL*ERFFLTQK*AAQSLVXSCDRSTLGTALAHN*KRHHGNMPVLQA*WGI*HHMNQLCSES*NP*I*LENQASV*FEHTSVLPTSTVVHS*LQCKPSSQKQKSRLWFLVPLSS*LRQQNAWDCILHYELEVQWT*DPICSPNLL*TQCSEG*GQSQKGAS*DQLVGS 1022

HSP 19 
Score: 60.1762 bits (125), Expect = 8.71283e-152
Identity = 27/32 (84.38%), Postives = 27/32 (84.38%), Query Frame = -3
Query:  804 NNSVKYMVLLPLLHQSQEN*MQTLNTSFLTSK 899
            NNSVKYMV LPLLHQSQ N MQTLN SFLT K
Sbjct: 1010 NNSVKYMVPLPLLHQSQGNQMQTLNXSFLTLK 1105

CC454_contig3695_v21.35526e-3798.28%
CC454_contig3695_v2
HSP 1 
Score: 134.864 bits (288), Expect = 1.35526e-37
Identity = 57/58 (98.28%), Postives = 58/58 (100.00%), Query Frame = 1
Query:  103 SQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIRE 276
            SQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLK+IALQARNAEYNPKRFAAVIMRIRE
Sbjct:   92 SQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKSIALQARNAEYNPKRFAAVIMRIRE 265

HSP 2 
Score: 39.0986 bits (79), Expect = 1.35526e-37
Identity = 13/17 (76.47%), Postives = 17/17 (100.00%), Query Frame = 2
Query:   41 ESKRRIYKKRKEWQNRD 91
            ++KRRI+KKRKEW+NRD
Sbjct:   33 QNKRRIFKKRKEWRNRD 83

HSP 3 
Score: 144.945 bits (310), Expect = 8.94135e-37
Identity = 56/59 (94.92%), Postives = 57/59 (96.61%), Query Frame = -2
Query:  100 FPYPHNYSSKTLGIVFCITSLKCNGLKIQFAVQIYCXHNVLKGRDNPRRVLLEINWLAP 276
            FPYPHNY SKTLGIVFCITSLKCNGLKIQFAVQIYC HNVLKGRDNPRRVLL+INWLAP
Sbjct:   89 FPYPHNYGSKTLGIVFCITSLKCNGLKIQFAVQIYCRHNVLKGRDNPRRVLLKINWLAP 265

HSP 4 
Score: 26.2688 bits (51), Expect = 8.94135e-37
Identity = 9/10 (90.00%), Postives = 9/10 (90.00%), Query Frame = -3
Query:   72 LPPNPCSAIP 101
            LP NPCSAIP
Sbjct:   64 LPSNPCSAIP 93

HSP 5 
Score: 129.366 bits (276), Expect = 1.51416e-35
Identity = 51/60 (85.00%), Postives = 52/60 (86.67%), Query Frame = 3
Query:   99 KEPTS*SQEAPFWDCPYPSEHCVXSKFGLQIGS*GHCTXXXXCRIQSQAFCCCNYEDKGT 278
            +EPTS*S EAPFWDCPYPSEHCV SKFGLQIGS* HCT    CRIQSQAFCC NYEDKGT
Sbjct:   88 REPTS*S*EAPFWDCPYPSEHCVYSKFGLQIGS*VHCTSSS*CRIQSQAFCCRNYEDKGT 267

HSP 6 
Score: 37.724 bits (76), Expect = 1.51416e-35
Identity = 14/17 (82.35%), Postives = 16/17 (94.12%), Query Frame = 3
Query:   42 RVKEEFIRKERNGRTGI 92
            R+KEEF+RKERNG TGI
Sbjct:   34 RIKEEFLRKERNGGTGI 84

HSP 7 
Score: 132.573 bits (283), Expect = 2.08248e-32
Identity = 56/59 (94.92%), Postives = 57/59 (96.61%), Query Frame = -1
Query:  101 VPLSS*LQQQNAWDCILHYELEVQWP*DPICSPNLLXTQCSEG*GQSQKGAS*DQLVGS 277
            VPLSS*L+QQNAWDCILHYELEVQW *DPICSPNLL TQCSEG*GQSQKGAS*DQLVGS
Sbjct:   90 VPLSS*LRQQNAWDCILHYELEVQWT*DPICSPNLL*TQCSEG*GQSQKGAS*DQLVGS 266

HSP 8 
Score: 23.9778 bits (46), Expect = 2.08248e-32
Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = -1
Query:   56 IPVLPFLSFLIN 91
            IPV PFLSFL N
Sbjct:   48 IPVPPFLSFLKN 83

HSP 9 
Score: 124.325 bits (265), Expect = 1.21275e-28
Identity = 55/60 (91.67%), Postives = 56/60 (93.33%), Query Frame = 2
Query:   98 EGANQLISRSTLLGLSLPFRTLCXQ*IWTANWILRPLHFKLVMQNTIPSVLLL*L*G*GN 277
            +GANQLI RSTLLGLSLPFRTLC Q*IWTANWIL PLHFKLVMQNTIPSVLL *L*G*GN
Sbjct:   87 KGANQLILRSTLLGLSLPFRTLCLQ*IWTANWILSPLHFKLVMQNTIPSVLLP*L*G*GN 266

HSP 10 
Score: 75.2971 bits (158), Expect = 3.27279e-19
Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = -3
Query:  102 NLQSKFTVDTMF*RVGTIPEGCFLRSTGWL 191
            NLQSKFTVDTMF*RVGTIPEGCFLRSTGWL
Sbjct:   91 NLQSKFTVDTMF*RVGTIPEGCFLRSTGWL 180

HSP 11 
Score: 36.8076 bits (74), Expect = 3.27279e-19
Identity = 16/16 (100.00%), Postives = 16/16 (100.00%), Query Frame = -3
Query:  231 GSLILIITAAKRLGLY 278
            GSLILIITAAKRLGLY
Sbjct:  220 GSLILIITAAKRLGLY 267

Blast Hits to Contigs V2 CCall

Analysis Date: 11-18-2009 (Blast: RO454_contigs_v2_vs_CCall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
CCall_contig1245_v2099.15%
CCall_contig1245_v2
HSP 1 
Score: 549.085 bits (1192), Expect = 0
Identity = 233/235 (99.15%), Postives = 234/235 (99.57%), Query Frame = 1
Query:  103 SQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIXLTGAKVRDETYTAFENIYPVLTEFRKNQQ*FCGKRSQILFAKVRRWNTWQCSC*AWIEL*I*KQIVHRFSGF 807
            SQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLK+IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKI LTGAKVRDETYTAFENIYPVLTEFRKNQQ*FCGKRSQILFAKVRRWNTWQCSC*AWIEL*I*KQIVHRFSGF
Sbjct:  308 SQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKSIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ*FCGKRSQILFAKVRRWNTWQCSC*AWIEL*I*KQIVHRFSGF 1012

HSP 2 
Score: 67.9658 bits (142), Expect = 0
Identity = 27/30 (90.00%), Postives = 29/30 (96.67%), Query Frame = 2
Query:    2 DHQTLAQTTSN*RESKRRIYKKRKEWQNRD 91
            DHQTLAQTTSN*RESKRRI+KKRK W+NRD
Sbjct:  210 DHQTLAQTTSN*RESKRRIFKKRKXWRNRD 299

HSP 3 
Score: 67.9658 bits (142), Expect = 0
Identity = 29/33 (87.88%), Postives = 31/33 (93.94%), Query Frame = 2
Query:  806 LKLKKMCSVSAFNFLGSDVVVGEEPYILQSC*K 904
            LKLKKM S SAF+FLGSDVVVGEEPYILQSC*+
Sbjct: 1012 LKLKKMXSXSAFDFLGSDVVVGEEPYILQSC*R 1110

HSP 4 
Score: 520.676 bits (1130), Expect = 5.25984e-174
Identity = 223/241 (92.53%), Postives = 226/241 (93.78%), Query Frame = 2
Query:   98 EGANQLISRSTLLGLSLPFRTLCXQ*IWTANWILRPLHFKLVMQNTIPSVLLL*L*G*GNQKPQP*XLLLGRWFVLELRVNNSXSWQHGSMLELYRSLVFPLNSRILRFRT*LVHVMLNSPSGLKDWHIPMVPFLVMSQSCSQG*SIA*NNQRLCCLFSCQEKSFXQELR*EMRPIQPLRTYTRCLQSSGKTSNDFVGREARSCLQKLGGGIPGNVAAEPGLNCKYKSKLCIGSLVLKLKK 820
            +GANQLI RSTLLGLSLPFRTLC Q*IWTANWIL PLHFKLVMQNTIPSVLL *L*G*GNQKPQP* LLLGRWF LELRVNNS SWQHGSMLELYRSLVF LNSRILRFRT*LVHVMLNSPSGLKDWHIPMVPFLVMSQSCSQG*SIA* NQRLCCLF CQEKSF QELR*EMRPIQPLRTYT CL+SSGKTSNDFVGREARSCLQK G GIPGNVAAEPGLNCKYKSKLCIGSLV K+KK
Sbjct:  303 KGANQLIXRSTLLGLSLPFRTLCLQ*IWTANWILSPLHFKLVMQNTIPSVLLP*L*G*GNQKPQP*FLLLGRWFALELRVNNSRSWQHGSMLELYRSLVFQLNSRILRFRT*LVHVMLNSPSGLKDWHIPMVPFLVMSQSCSQG*SIA*XNQRLCCLFLCQEKSFLQELR*EMRPIQPLRTYTXCLRSSGKTSNDFVGREARSCLQKFGDGIPGNVAAEPGLNCKYKSKLCIGSLVFKVKK 1025

HSP 5 
Score: 67.0494 bits (140), Expect = 5.25984e-174
Identity = 29/33 (87.88%), Postives = 31/33 (93.94%), Query Frame = 3
Query:  804 F*S*KRCVQCLHLIFLALM**WEKNHIFYRVVE 902
            F*S*KR VQCLHLI LALM**WE+NHIFYRVV+
Sbjct: 1010 F*S*KRXVQCLHLISLALM**WERNHIFYRVVD 1108

HSP 6 
Score: 61.5509 bits (128), Expect = 5.25984e-174
Identity = 26/30 (86.67%), Postives = 28/30 (93.33%), Query Frame = 3
Query:    3 IIKP*HRQHQIKERVKEEFIRKERNGRTGI 92
            IIKP*HRQ QI+ERVKEEF+RKERNG TGI
Sbjct:  211 IIKP*HRQLQIEERVKEEFLRKERNGGTGI 300

HSP 7 
Score: 530.298 bits (1151), Expect = 4.67642e-169
Identity = 214/240 (89.17%), Postives = 215/240 (89.58%), Query Frame = -2
Query:  100 FFNFKTREPMHNLLLYLQFNPGSAATLPGIPPPNFCKQDLASLPTKSLLVFPELCKHRVYVLKGCIGLISHLSSCXXDFS*HENKQHNLWLFHAIDQPWEQLWLITRKGTMGICQSFKPDGEFNIT*TNYVLNLKILEFSGKTKLLYNSSILPCCQXXXXXXXXXXTNHLPRSKXQGCGFWFPYPHNYSSKTLGIVFCITSLKCNGLKIQFAVQIYCXHNVLKGRDNPRRVLLEINWLAP 819
            F   KTREPMHNLLLYLQFNPGSAATLPGIP PNFCKQDLASLPTKSLLVFPEL KH VYVLKGCIGLISHLSSC  DFS*H+NKQHNLWL HAIDQPWEQLWLITRKGTMGICQSFKPDGEFNIT*TNYVLNLKILEFS KTKLLYNSSILPCCQ           NHLPRSK QGCGFWFPYPHNY SKTLGIVFCITSLKCNGLKIQFAVQIYC HNVLKGRDNPRRVLL INWLAP
Sbjct:  305 FLTLKTREPMHNLLLYLQFNPGSAATLPGIPSPNFCKQDLASLPTKSLLVFPELRKHXVYVLKGCIGLISHLSSCKNDFS*HKNKQHNLWLXHAIDQPWEQLWLITRKGTMGICQSFKPDGEFNIT*TNYVLNLKILEFSWKTKLLYNSSILPCCQLRLLFTLSSSANHLPRSKNQGCGFWFPYPHNYGSKTLGIVFCITSLKCNGLKIQFAVQIYCRHNVLKGRDNPRRVLLXINWLAP 1024

HSP 8 
Score: 72.5479 bits (152), Expect = 4.67642e-169
Identity = 29/34 (85.29%), Postives = 30/34 (88.24%), Query Frame = -2
Query:  799 QQLCKIYGSSPTTTSEPRKLNADTEHIFFNFKTR 900
            QQLCKIYGSSPTTTSEPRK NAD E IFFNFK +
Sbjct: 1005 QQLCKIYGSSPTTTSEPRKSNADXEXIFFNFKNQ 1106

HSP 9 
Score: 25.3524 bits (49), Expect = 4.67642e-169
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = -3
Query:    3 NLMLSVLGFDD 35
            NL LSVLGFDD
Sbjct:  211 NLKLSVLGFDD 243

HSP 10 
Score: 23.9778 bits (46), Expect = 4.67642e-169
Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = -1
Query:   56 IPVLPFLSFLIN 91
            IPV PFLSFL N
Sbjct:  264 IPVPPFLSFLKN 299

HSP 11 
Score: 451.028 bits (978), Expect = 6.96213e-160
Identity = 189/192 (98.44%), Postives = 189/192 (98.44%), Query Frame = -3
Query:  231 KPENRCTICFYIYSSIQAQQLHCQVFHLLTFANKIWLLFPQNHCWFFLNSVSTGYMFSKAV*VSSLTLAPVRXIFPDTKISSTIFGCFMR*INPGNSSGS*LEKAPWEYASPSSLMGNLTSHEPTMF*ILKSLNLAGKPSFCIIRAYFRAANFDCCSLLAPVQTIFPEAXIKAVVFGSLILIITAAKRLGLY 806
            KPENRCTICFYIYSSIQAQQLHCQVFHL TFANKIWLLFPQNHCWFFLNSVSTGYMFSKAV*VSSLTLAPVR IFPDTKISSTIFGCFMR*INPGNSSGS*LEKAPWEYASPSSLMGNLTSHEPTMF*ILKSLNLAGKPSFCIIRAYFRAANFDCCSLLAPVQTIFPEA IKAVVFGSLILIITAAKRLGLY
Sbjct:  436 KPENRCTICFYIYSSIQAQQLHCQVFHLRTFANKIWLLFPQNHCWFFLNSVSTGYMFSKAV*VSSLTLAPVRTIFPDTKISSTIFGCFMR*INPGNSSGS*LEKAPWEYASPSSLMGNLTSHEPTMF*ILKSLNLAGKPSFCIIRAYFRAANFDCCSLLAPVQTIFPEAKIKAVVFGSLILIITAAKRLGLY 1011

HSP 12 
Score: 75.2971 bits (158), Expect = 6.96213e-160
Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = -3
Query:  102 NLQSKFTVDTMF*RVGTIPEGCFLRSTGWL 191
            NLQSKFTVDTMF*RVGTIPEGCFLRSTGWL
Sbjct:  307 NLQSKFTVDTMF*RVGTIPEGCFLRSTGWL 396

HSP 13 
Score: 72.0897 bits (151), Expect = 6.96213e-160
Identity = 29/31 (93.55%), Postives = 30/31 (96.77%), Query Frame = -1
Query:  809 STTL*NIWFFSHYYIRAKKIKCRH*THLF*L 901
            STTL*NIWF SHYYIRAK+IKCRH*THLF*L
Sbjct: 1015 STTL*NIWFLSHYYIRAKEIKCRH*THLF*L 1107

HSP 14 
Score: 23.0613 bits (44), Expect = 6.96213e-160
Identity = 8/9 (88.89%), Postives = 8/9 (88.89%), Query Frame = -3
Query:   75 LPPNPCSAI 101
            LP NPCSAI
Sbjct:  283 LPSNPCSAI 309

HSP 15 
Score: 498.224 bits (1081), Expect = 6.27552e-155
Identity = 210/236 (88.98%), Postives = 213/236 (90.25%), Query Frame = 3
Query:   99 KEPTS*SQEAPFWDCPYPSEHCVXSKFGLQIGS*GHCTXXXXCRIQSQAFCCCNYEDKGTKNHSLDXCFWEDGLYWS*EXXXXXXGSTEVCSNYTEAWFSR*IQGF*DSEHSWFM*C*IPHQA*RTGIFPWCLF*L*ARAVPRVDLSHETTKDCAAYFRVRKNXSXRS*GER*DLYSL*EHIPGAYRVQEKPAMILWEEKPDLVCKS*EVEYLAM*LLSLD*TVNIKANCASVLWF 806
            +EPTS*S EAPFWDCPYPSEHCV SKFGLQIGS* HCT    CRIQSQAFCC NYEDKGTKNHSLD CFWEDGL+WS*E      GSTEVCSNYTEAWFS *IQGF*DSEHSWFM*C*IPHQA*RTGIFPWCLF*L*ARAVPRVDLSHE TKDCAAYF VRKN S RS*GER*DLYSL*EHIP AY VQEKPAMILWEEKPDLVCKS E+EYLAM*LLSLD*TVNIKANCASVLWF
Sbjct:  304 REPTS*SXEAPFWDCPYPSEHCVYSKFGLQIGS*VHCTSSS*CRIQSQAFCCRNYEDKGTKNHSLDFCFWEDGLHWS*E*TTVEVGSTEVCSNYTEAWFSS*IQGF*DSEHSWFM*C*IPHQA*RTGIFPWCLF*L*ARAVPRVDLSHEXTKDCAAYFCVRKNRSYRS*GER*DLYSL*EHIPXAYGVQEKPAMILWEEKPDLVCKSSEMEYLAM*LLSLD*TVNIKANCASVLWF 1011

HSP 16 
Score: 65.2165 bits (136), Expect = 6.27552e-155
Identity = 27/32 (84.38%), Postives = 28/32 (87.50%), Query Frame = 1
Query:  805 FEVKKDVFSVCI*FSWL*CSSGRRTIYFTELL 900
            F+VKKD F VCI*F WL*CSSGR TIYFTELL
Sbjct: 1011 FKVKKDXFXVCI*FPWL*CSSGRGTIYFTELL 1106

HSP 17 
Score: 22.1449 bits (42), Expect = 6.27552e-155
Identity = 8/8 (100.00%), Postives = 8/8 (100.00%), Query Frame = 1
Query:    4 SSNPSTDN 27
            SSNPSTDN
Sbjct:  212 SSNPSTDN 235

HSP 18 
Score: 495.016 bits (1074), Expect = 9.05168e-152
Identity = 223/239 (93.31%), Postives = 226/239 (94.56%), Query Frame = -1
Query:  101 F*LQNQRTDAQFAFIFTVQSRLSSYIARYSTS*LLQTRSGFSSHKIIAGFS*TL*APGICSQRLYRSHLSP*LL*ERFFLTRK*AAQSLVVSCDRSTLGTALAHN*KRHHGNMPVLQA*WGI*HHMNQLCSES*NP*I*RENQASV*FEHTSVLPTXTVVHS*LQYKPSSQKQXSRLWFLVPLSS*LQQQNAWDCILHYELEVQWP*DPICSPNLLXTQCSEG*GQSQKGAS*DQLVGS 817
            F  +NQRTDAQFAFIFTVQSRLSSYIARYS S LLQTRSGFSSHKIIAGFS*T *A GICSQRLYRSHLSP*LL*ERFFLT+K*AAQSLV SCDRSTLGTALAHN*KRHHGNMPVLQA*WGI*HHMNQLCSES*NP*I* ENQASV*FEHTSVLPT TVVHS*LQ KPSSQKQ SRLWFLVPLSS*L+QQNAWDCILHYELEVQW *DPICSPNLL TQCSEG*GQSQKGAS*DQLVGS
Sbjct:  306 FNFKNQRTDAQFAFIFTVQSRLSSYIARYSISELLQTRSGFSSHKIIAGFS*TP*AXGICSQRLYRSHLSP*LL*ERFFLTQK*AAQSLVXSCDRSTLGTALAHN*KRHHGNMPVLQA*WGI*HHMNQLCSES*NP*I*LENQASV*FEHTSVLPTSTVVHS*LQCKPSSQKQKSRLWFLVPLSS*LRQQNAWDCILHYELEVQWT*DPICSPNLL*TQCSEG*GQSQKGAS*DQLVGS 1022

HSP 19 
Score: 60.1762 bits (125), Expect = 9.05168e-152
Identity = 27/32 (84.38%), Postives = 27/32 (84.38%), Query Frame = -3
Query:  804 NNSVKYMVLLPLLHQSQEN*MQTLNTSFLTSK 899
            NNSVKYMV LPLLHQSQ N MQTLN SFLT K
Sbjct: 1010 NNSVKYMVPLPLLHQSQGNQMQTLNXSFLTLK 1105

CCall_contig20509_v21.40797e-3798.28%
CCall_contig20509_v2
HSP 1 
Score: 134.864 bits (288), Expect = 1.40797e-37
Identity = 57/58 (98.28%), Postives = 58/58 (100.00%), Query Frame = 1
Query:  103 SQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIRE 276
            SQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLK+IALQARNAEYNPKRFAAVIMRIRE
Sbjct:   92 SQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKSIALQARNAEYNPKRFAAVIMRIRE 265

HSP 2 
Score: 39.0986 bits (79), Expect = 1.40797e-37
Identity = 13/17 (76.47%), Postives = 17/17 (100.00%), Query Frame = 2
Query:   41 ESKRRIYKKRKEWQNRD 91
            ++KRRI+KKRKEW+NRD
Sbjct:   33 QNKRRIFKKRKEWRNRD 83

HSP 3 
Score: 144.945 bits (310), Expect = 9.2891e-37
Identity = 56/59 (94.92%), Postives = 57/59 (96.61%), Query Frame = -2
Query:  100 FPYPHNYSSKTLGIVFCITSLKCNGLKIQFAVQIYCXHNVLKGRDNPRRVLLEINWLAP 276
            FPYPHNY SKTLGIVFCITSLKCNGLKIQFAVQIYC HNVLKGRDNPRRVLL+INWLAP
Sbjct:   89 FPYPHNYGSKTLGIVFCITSLKCNGLKIQFAVQIYCRHNVLKGRDNPRRVLLKINWLAP 265

HSP 4 
Score: 26.2688 bits (51), Expect = 9.2891e-37
Identity = 9/10 (90.00%), Postives = 9/10 (90.00%), Query Frame = -3
Query:   72 LPPNPCSAIP 101
            LP NPCSAIP
Sbjct:   64 LPSNPCSAIP 93

HSP 5 
Score: 129.366 bits (276), Expect = 1.57305e-35
Identity = 51/60 (85.00%), Postives = 52/60 (86.67%), Query Frame = 3
Query:   99 KEPTS*SQEAPFWDCPYPSEHCVXSKFGLQIGS*GHCTXXXXCRIQSQAFCCCNYEDKGT 278
            +EPTS*S EAPFWDCPYPSEHCV SKFGLQIGS* HCT    CRIQSQAFCC NYEDKGT
Sbjct:   88 REPTS*S*EAPFWDCPYPSEHCVYSKFGLQIGS*VHCTSSS*CRIQSQAFCCRNYEDKGT 267

HSP 6 
Score: 37.724 bits (76), Expect = 1.57305e-35
Identity = 14/17 (82.35%), Postives = 16/17 (94.12%), Query Frame = 3
Query:   42 RVKEEFIRKERNGRTGI 92
            R+KEEF+RKERNG TGI
Sbjct:   34 RIKEEFLRKERNGGTGI 84

HSP 7 
Score: 132.573 bits (283), Expect = 2.16348e-32
Identity = 56/59 (94.92%), Postives = 57/59 (96.61%), Query Frame = -1
Query:  101 VPLSS*LQQQNAWDCILHYELEVQWP*DPICSPNLLXTQCSEG*GQSQKGAS*DQLVGS 277
            VPLSS*L+QQNAWDCILHYELEVQW *DPICSPNLL TQCSEG*GQSQKGAS*DQLVGS
Sbjct:   90 VPLSS*LRQQNAWDCILHYELEVQWT*DPICSPNLL*TQCSEG*GQSQKGAS*DQLVGS 266

HSP 8 
Score: 23.9778 bits (46), Expect = 2.16348e-32
Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = -1
Query:   56 IPVLPFLSFLIN 91
            IPV PFLSFL N
Sbjct:   48 IPVPPFLSFLKN 83

HSP 9 
Score: 124.325 bits (265), Expect = 1.25992e-28
Identity = 55/60 (91.67%), Postives = 56/60 (93.33%), Query Frame = 2
Query:   98 EGANQLISRSTLLGLSLPFRTLCXQ*IWTANWILRPLHFKLVMQNTIPSVLLL*L*G*GN 277
            +GANQLI RSTLLGLSLPFRTLC Q*IWTANWIL PLHFKLVMQNTIPSVLL *L*G*GN
Sbjct:   87 KGANQLILRSTLLGLSLPFRTLCLQ*IWTANWILSPLHFKLVMQNTIPSVLLP*L*G*GN 266

HSP 10 
Score: 75.2971 bits (158), Expect = 3.40007e-19
Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = -3
Query:  102 NLQSKFTVDTMF*RVGTIPEGCFLRSTGWL 191
            NLQSKFTVDTMF*RVGTIPEGCFLRSTGWL
Sbjct:   91 NLQSKFTVDTMF*RVGTIPEGCFLRSTGWL 180

HSP 11 
Score: 36.8076 bits (74), Expect = 3.40007e-19
Identity = 16/16 (100.00%), Postives = 16/16 (100.00%), Query Frame = -3
Query:  231 GSLILIITAAKRLGLY 278
            GSLILIITAAKRLGLY
Sbjct:  220 GSLILIITAAKRLGLY 267

Blast Hits to C. Parasitica Protein

Analysis Date: 11-18-2009 (Blast: RO454_contigs_v2_vs_CparasiticaFilteredProteinModelsAAseqs)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
estExt_Genewise1Plus.C_910161.19225e-8286.59%
Crypa1|95100|estExt_Genewise1Plus.C_91016
HSP 1 
Score: 301.982 bits (772), Expect = 1.19225e-82
Identity = 155/179 (86.59%), Postives = 162/179 (90.50%), Query Frame = 1
Query:  133 SGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIXLTGAKVRDETYTAFENIYPVLTEFRK 669
            SG+VPTLQNIV+TVNLDC+LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV TGAKSE  SKLA+RKYARIIQKLGF AKF DFKIQNIVGSCD+KFPIRLEGLA  H  FSSYEPELFPGLIYRM +PKIVLLIFVSGKI LTGAKVRDE Y AFE IYPVL +FRK
Sbjct:   77 SGLVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVRDEIYHAFELIYPVLQDFRK 255

Blast Hits to MedicagoProt

Analysis Date: 11-18-2009 (Blast: RO454_contigs_v2_vs_MedicagoProt_20080227)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
IMGA|AC135100_45.5 Tran2.78884e-3055.07%
cription factor TFIID, C-terminal/DNA glycosylase, N-terminal chr08_pseudomolecule_IMGAG_V2 29847151-29848891 H EGN_Mt071002 20080227
HSP 1 
Score: 128.642 bits (322), Expect = 2.78884e-30
Identity = 76/138 (55.07%), Postives = 91/138 (65.94%), Query Frame = 1
Query:   76 MAEQGLGGRSQPVDLKKHPSG--IVPTL---QNIVSTVNLDCKLDLKAIALQARNAEYNPK---------------------RFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFK 411
            MA+Q +    Q VDL+KHPSG  I P L   QN+VSTVN  CKLDL+AIALQ+R+A Y PK                      F  +IM+IR+PK TALI++SGKM+CTG  +E+QSKLAARKY RIIQK GFP KFK
Sbjct:    1 MADQEMQDSQQAVDLQKHPSGAAIAPNLNNVQNLVSTVNWMCKLDLEAIALQSRSAVYKPKASFICSFIVNLIQIPSVLCMQHFPFLIMKIRKPKATALIYSSGKMICTGG-NEKQSKLAARKYTRIIQKCGFPVKFK 137

IMGA|AC174143_32.4 Tran2.78884e-3055.07%
cription factor TFIID, C-terminal/DNA glycosylase, N-terminal chr08_pseudomolecule_IMGAG_V2 29693861-29692121 H EGN_Mt071002 20080227
HSP 1 
Score: 128.642 bits (322), Expect = 2.78884e-30
Identity = 76/138 (55.07%), Postives = 91/138 (65.94%), Query Frame = 1
Query:   76 MAEQGLGGRSQPVDLKKHPSG--IVPTL---QNIVSTVNLDCKLDLKAIALQARNAEYNPK---------------------RFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFK 411
            MA+Q +    Q VDL+KHPSG  I P L   QN+VSTVN  CKLDL+AIALQ+R+A Y PK                      F  +IM+IR+PK TALI++SGKM+CTG  +E+QSKLAARKY RIIQK GFP KFK
Sbjct:    1 MADQEMQDSQQAVDLQKHPSGAAIAPNLNNVQNLVSTVNWMCKLDLEAIALQSRSAVYKPKASFICSFIVNLIQIPSVLCMQHFPFLIMKIRKPKATALIYSSGKMICTGG-NEKQSKLAARKYTRIIQKCGFPVKFK 137

IMGA|AC135100_43.5 Tran3.19825e-1849.62%
cription factor TFIID, C-terminal/DNA glycosylase, N-terminal chr08_pseudomolecule_IMGAG_V2 29852831-29854886 H EGN_Mt071002 20080227
HSP 1 
Score: 88.5817 bits (218), Expect = 3.19825e-18
Identity = 65/131 (49.62%), Postives = 76/131 (58.02%), Query Frame = 1
Query:  151 LQNIVSTVNLDCKLDLKAIALQARNAE---YNPK----------RFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 504
            L+NIVSTVN   KLDLKAI LQA N     Y PK          R   ++M+IREPKTTALI ASG M  TG                I+QKLGFPAKF+DFKI++     +V F   L+GLA S+GA SS
Sbjct:    6 LKNIVSTVNWGRKLDLKAIGLQAPNTRIVTYKPKASFICSIVVNRIPFLVMKIREPKTTALISASGMM--TG----------------IMQKLGFPAKFEDFKIRS---QMNVNFRKWLDGLARSYGASSS 115

IMGA|AC174143_30.4 Tran3.19825e-1849.62%
cription factor TFIID, C-terminal/DNA glycosylase, N-terminal chr08_pseudomolecule_IMGAG_V2 29688181-29686126 H EGN_Mt071002 20080227
HSP 1 
Score: 88.5817 bits (218), Expect = 3.19825e-18
Identity = 65/131 (49.62%), Postives = 76/131 (58.02%), Query Frame = 1
Query:  151 LQNIVSTVNLDCKLDLKAIALQARNAE---YNPK----------RFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 504
            L+NIVSTVN   KLDLKAI LQA N     Y PK          R   ++M+IREPKTTALI ASG M  TG                I+QKLGFPAKF+DFKI++     +V F   L+GLA S+GA SS
Sbjct:    6 LKNIVSTVNWGRKLDLKAIGLQAPNTRIVTYKPKASFICSIVVNRIPFLVMKIREPKTTALISASGMM--TG----------------IMQKLGFPAKFEDFKIRS---QMNVNFRKWLDGLARSYGASSS 115

Blast Hits to Contig V2 Oall

Analysis Date: 11-18-2009 (Blast: RO454_contigs_v2_vs_Oall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
Oall_contig1191_v2099.25%
Oall_contig1191_v2
HSP 1 
Score: 619.191 bits (1345), Expect = 0
Identity = 264/266 (99.25%), Postives = 264/266 (99.25%), Query Frame = 1
Query:  103 SQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIXLTGAKVRDETYTAFENIYPVLTEFRKNQQ*FCGKRSQILFAKVRRWNTWQCSC*AWIEL*I*KQIVHRFSGFEVKKDVFSVCI*FSWL*CSSGRRTIYFTELL 900
            SQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKI LTGAKVRDETYTAFENIYPVLTEFRKNQQ*FCGKRSQILFAKVRRWNTWQCSC*AWIEL*I*KQIVHRFSGF VKKDVFSVCI*FSWL*CSSGRRTIYFTELL
Sbjct:  325 SQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ*FCGKRSQILFAKVRRWNTWQCSC*AWIEL*I*KQIVHRFSGFXVKKDVFSVCI*FSWL*CSSGRRTIYFTELL 1122

HSP 2 
Score: 71.6314 bits (150), Expect = 0
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 2
Query:    2 DHQTLAQTTSN*RESKRRIYKKRKEWQNR 88
            DHQTLAQTTSN*RESKRRIYKKRKEWQNR
Sbjct:  227 DHQTLAQTTSN*RESKRRIYKKRKEWQNR 313

HSP 3 
Score: 611.401 bits (1328), Expect = 0
Identity = 263/268 (98.13%), Postives = 264/268 (98.51%), Query Frame = 2
Query:   98 EGANQLISRSTLLGLSLPFRTLCXQ*IWTANWILRPLHFKLVMQNTIPSVLLL*L*G*GNQKPQP*XLLLGRWFVLELRVNNSXSWQHGSMLELYRSLVFPLNSRILRFRT*LVHVMLNSPSGLKDWHIPMVPFLVMSQSCSQG*SIA*NNQRLCCLFSCQEKSFXQELR*EMRPIQPLRTYTRCLQSSGKTSNDFVGREARSCLQKLGGGIPGNVAAEPGLNCKYKSKLCIGSLVLKLKKMCSVSAFNFLGSDVVVGEEPYILQSC* 901
            +GANQLISRSTLLGLSLPFRTLC Q*IWTANWILRPLHFKLVMQNTIPSVLLL*L*G*GNQKPQP*XLLLGRWFVLELRVNNSXSWQHGSMLELYRSLVFPLNSRILRFRT*LVHVMLNSPSGLKDWHIPMVPFLVMSQSCSQG*SIA*NNQRLCCLF CQEKSF QELR*EMRPIQPLRTYTRCLQSSGKTSNDFVGREARSCLQKLGGGIPGNVAAEPGLNCKYKSKLCIGSLV KLKKMCSVSAFNFLGSDVVVGEEPYILQSC*
Sbjct:  320 KGANQLISRSTLLGLSLPFRTLCLQ*IWTANWILRPLHFKLVMQNTIPSVLLL*L*G*GNQKPQP*XLLLGRWFVLELRVNNSXSWQHGSMLELYRSLVFPLNSRILRFRT*LVHVMLNSPSGLKDWHIPMVPFLVMSQSCSQG*SIA*NNQRLCCLFXCQEKSFLQELR*EMRPIQPLRTYTRCLQSSGKTSNDFVGREARSCLQKLGGGIPGNVAAEPGLNCKYKSKLCIGSLVXKLKKMCSVSAFNFLGSDVVVGEEPYILQSC* 1123

HSP 4 
Score: 69.7986 bits (146), Expect = 0
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 3
Query:    3 IIKP*HRQHQIKERVKEEFIRKERNGRTGI 92
            IIKP*HRQHQIKERV EEFIRKERNGRTGI
Sbjct:  228 IIKP*HRQHQIKERVXEEFIRKERNGRTGI 317

HSP 5 
Score: 623.315 bits (1354), Expect = 0
Identity = 253/267 (94.76%), Postives = 253/267 (94.76%), Query Frame = -2
Query:  100 QQLCKIYGSSPTTTSEPRKLNADTEHIFFNFKTREPMHNLLLYLQFNPGSAATLPGIPPPNFCKQDLASLPTKSLLVFPELCKHRVYVLKGCIGLISHLSSCXXDFS*HENKQHNLWLFHAIDQPWEQLWLITRKGTMGICQSFKPDGEFNIT*TNYVLNLKILEFSGKTKLLYNSSILPCCQXXXXXXXXXXTNHLPRSKXQGCGFWFPYPHNYSSKTLGIVFCITSLKCNGLKIQFAVQIYCXHNVLKGRDNPRRVLLEINWLAP 900
            QQLCKIYGSSPTTTSEPRKLNADTEHIFFN KTREPMHNLLLYLQFNPGSAATLPGIPPPNFCKQDLASLPTKSLLVFPELCKHRVYVLKGCIGLISHLSSC  DFS*H NKQHNLWLFHAIDQPWEQLWLITRKGTMGICQSFKPDGEFNIT*TNYVLNLKILEFSGKTKLLYNSSILPCCQ X        TNHLPRSKXQGCGFWFPYPHNYSSKTLGIVFCITSLKCNGLKIQFAVQIYC HNVLKGRDNPRRVLLEINWLAP
Sbjct:  322 QQLCKIYGSSPTTTSEPRKLNADTEHIFFNXKTREPMHNLLLYLQFNPGSAATLPGIPPPNFCKQDLASLPTKSLLVFPELCKHRVYVLKGCIGLISHLSSCKNDFS*HXNKQHNLWLFHAIDQPWEQLWLITRKGTMGICQSFKPDGEFNIT*TNYVLNLKILEFSGKTKLLYNSSILPCCQLXLLFTLSSSTNHLPRSKXQGCGFWFPYPHNYSSKTLGIVFCITSLKCNGLKIQFAVQIYCRHNVLKGRDNPRRVLLEINWLAP 1122

HSP 6 
Score: 42.3061 bits (86), Expect = 0
Identity = 21/33 (63.64%), Postives = 21/33 (63.64%), Query Frame = -3
Query:    3 LPPNPCSAIPXXXXXXXXXXXFNLMLSVLGFDD 101
            LP N CSAIP       X   FNLMLSVLGFDD
Sbjct:  228 LPSNACSAIPFFSYKFFXYSLFNLMLSVLGFDD 326

HSP 7 
Score: 593.073 bits (1288), Expect = 1.31908e-172
Identity = 264/267 (98.88%), Postives = 264/267 (98.88%), Query Frame = -1
Query:  101 STTL*NIWFFSHYYIRAKKIKCRH*THLF*LQNQRTDAQFAFIFTVQSRLSSYIARYSTS*LLQTRSGFSSHKIIAGFS*TL*APGICSQRLYRSHLSP*LL*ERFFLTRK*AAQSLVVSCDRSTLGTALAHN*KRHHGNMPVLQA*WGI*HHMNQLCSES*NP*I*RENQASV*FEHTSVLPTXTVVHS*LQYKPSSQKQXSRLWFLVPLSS*LQQQNAWDCILHYELEVQWP*DPICSPNLLXTQCSEG*GQSQKGAS*DQLVGS 901
            STTL*NIWFFSHYYIRAKKIKCRH*THLF*L NQRTDAQFAFIFTVQSRLSSYIARYSTS*LLQTRSGFSSHKIIAGFS*TL*APGICSQRLYRSHLSP*LL*ERFFLT K*AAQSLVVSCDRSTLGTALAHN*KRHHGNMPVLQA*WGI*HHMNQLCSES*NP*I*RENQASV*FEHTSVLPTXTVVHS*LQYKPSSQKQXSRLWFLVPLSS*LQQQNAWDCILHYELEVQWP*DPICSPNLL TQCSEG*GQSQKGAS*DQLVGS
Sbjct:  323 STTL*NIWFFSHYYIRAKKIKCRH*THLF*LXNQRTDAQFAFIFTVQSRLSSYIARYSTS*LLQTRSGFSSHKIIAGFS*TL*APGICSQRLYRSHLSP*LL*ERFFLTXK*AAQSLVVSCDRSTLGTALAHN*KRHHGNMPVLQA*WGI*HHMNQLCSES*NP*I*RENQASV*FEHTSVLPTXTVVHS*LQYKPSSQKQXSRLWFLVPLSS*LQQQNAWDCILHYELEVQWP*DPICSPNLL*TQCSEG*GQSQKGAS*DQLVGS 1123

HSP 8 
Score: 29.0181 bits (57), Expect = 1.31908e-172
Identity = 11/12 (91.67%), Postives = 12/12 (100.00%), Query Frame = -1
Query:   56 IPVLPFLSFLIN 91
            +PVLPFLSFLIN
Sbjct:  281 MPVLPFLSFLIN 316

HSP 9 
Score: 22.1449 bits (42), Expect = 1.31908e-172
Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = -2
Query:    1 DVVCARV**S 30
            DVVCARV**S
Sbjct:  226 DVVCARV**S 255

HSP 10 
Score: 597.197 bits (1297), Expect = 2.23005e-172
Identity = 252/267 (94.38%), Postives = 253/267 (94.76%), Query Frame = 3
Query:   99 KEPTS*SQEAPFWDCPYPSEHCVXSKFGLQIGS*GHCTXXXXCRIQSQAFCCCNYEDKGTKNHSLDXCFWEDGLYWS*EXXXXXXGSTEVCSNYTEAWFSR*IQGF*DSEHSWFM*C*IPHQA*RTGIFPWCLF*L*ARAVPRVDLSHETTKDCAAYFRVRKNXSXRS*GER*DLYSL*EHIPGAYRVQEKPAMILWEEKPDLVCKS*EVEYLAM*LLSLD*TVNIKANCASVLWF*S*KRCVQCLHLIFLALM**WEKNHIFYRVV 899
            +EPTS*SQEAPFWDCPYPSEHCV SKFGLQIGS*GHCT    CRIQSQAFCCCNYEDKGTKNHSLDXCFWEDGLYWS*E    X GSTEVCSNYTEAWFSR*IQGF*DSEHSWFM*C*IPHQA*RTGIFPWCLF*L*ARAVPRVDLSHETTKDCAAYF VRKN S RS*GER*DLYSL*EHIPGAYRVQEKPAMILWEEKPDLVCKS*EVEYLAM*LLSLD*TVNIKANCASVLWF S*KRCVQCLHLIFLALM**WEKNHIFYRVV
Sbjct:  321 REPTS*SQEAPFWDCPYPSEHCVYSKFGLQIGS*GHCTSSS*CRIQSQAFCCCNYEDKGTKNHSLDXCFWEDGLYWS*E*TTVXVGSTEVCSNYTEAWFSR*IQGF*DSEHSWFM*C*IPHQA*RTGIFPWCLF*L*ARAVPRVDLSHETTKDCAAYFXVRKNRSYRS*GER*DLYSL*EHIPGAYRVQEKPAMILWEEKPDLVCKS*EVEYLAM*LLSLD*TVNIKANCASVLWFXS*KRCVQCLHLIFLALM**WEKNHIFYRVV 1121

HSP 11 
Score: 26.2688 bits (51), Expect = 2.23005e-172
Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = 1
Query:    1 RSSNPSTDNI 30
            RSSNPSTDNI
Sbjct:  226 RSSNPSTDNI 255

HSP 12 
Score: 520.676 bits (1130), Expect = 4.01628e-164
Identity = 221/223 (99.10%), Postives = 221/223 (99.10%), Query Frame = -3
Query:  231 NNSVKYMVLLPLLHQSQEN*MQTLNTSFLTSKPENRCTICFYIYSSIQAQQLHCQVFHLLTFANKIWLLFPQNHCWFFLNSVSTGYMFSKAV*VSSLTLAPVRXIFPDTKISSTIFGCFMR*INPGNSSGS*LEKAPWEYASPSSLMGNLTSHEPTMF*ILKSLNLAGKPSFCIIRAYFRAANFDCCSLLAPVQTIFPEAXIKAVVFGSLILIITAAKRLGLY 899
            NNSVKYMVLLPLLHQSQEN*MQTLNTSFLT KPENRCTICFYIYSSIQAQQLHCQVFHLLTFANKIWLLFPQNHCWFFLNSVSTGYMFSKAV*VSSLTLAPVR IFPDTKISSTIFGCFMR*INPGNSSGS*LEKAPWEYASPSSLMGNLTSHEPTMF*ILKSLNLAGKPSFCIIRAYFRAANFDCCSLLAPVQTIFPEAXIKAVVFGSLILIITAAKRLGLY
Sbjct:  453 NNSVKYMVLLPLLHQSQEN*MQTLNTSFLTXKPENRCTICFYIYSSIQAQQLHCQVFHLLTFANKIWLLFPQNHCWFFLNSVSTGYMFSKAV*VSSLTLAPVRTIFPDTKISSTIFGCFMR*INPGNSSGS*LEKAPWEYASPSSLMGNLTSHEPTMF*ILKSLNLAGKPSFCIIRAYFRAANFDCCSLLAPVQTIFPEAXIKAVVFGSLILIITAAKRLGLY 1121

HSP 13 
Score: 75.2971 bits (158), Expect = 4.01628e-164
Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = -3
Query:  102 NLQSKFTVDTMF*RVGTIPEGCFLRSTGWL 191
            NLQSKFTVDTMF*RVGTIPEGCFLRSTGWL
Sbjct:  324 NLQSKFTVDTMF*RVGTIPEGCFLRSTGWL 413

Oall_contig24657_v22.4387e-29100.00%
Oall_contig24657_v2
HSP 1 
Score: 81.712 bits (172), Expect = 2.4387e-29
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 1
Query:  316 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDF 417
            VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDF
Sbjct:  369 VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDF 470

HSP 2 
Score: 49.1792 bits (101), Expect = 2.4387e-29
Identity = 17/19 (89.47%), Postives = 18/19 (94.74%), Query Frame = 3
Query:   99 KEPTS*SQEAPFWDCPYPS 155
            +EPTS SQEAPFWDCPYPS
Sbjct:  312 REPTSXSQEAPFWDCPYPS 368

HSP 3 
Score: 35.433 bits (71), Expect = 2.4387e-29
Identity = 13/14 (92.86%), Postives = 13/14 (92.86%), Query Frame = 2
Query:   44 SKRRIYKKRKEWQN 85
            SKRRIYKKRKEW N
Sbjct:  260 SKRRIYKKRKEWXN 301

HSP 4 
Score: 87.2105 bits (184), Expect = 3.47468e-27
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = -3
Query:  315 LKSLNLAGKPSFCIIRAYFRAANFDCCSLLAPVQT 419
            LKSLNLAGKPSFCIIRAYFRAANFDCCSLLAPVQT
Sbjct:  368 LKSLNLAGKPSFCIIRAYFRAANFDCCSLLAPVQT 472

HSP 5 
Score: 47.3464 bits (97), Expect = 3.47468e-27
Identity = 18/18 (100.00%), Postives = 18/18 (100.00%), Query Frame = -3
Query:  102 *RVGTIPEGCFLRSTGWL 155
            *RVGTIPEGCFLRSTGWL
Sbjct:  315 *RVGTIPEGCFLRSTGWL 368

HSP 6 
Score: 24.436 bits (47), Expect = 3.47468e-27
Identity = 9/12 (75.00%), Postives = 9/12 (75.00%), Query Frame = -1
Query:   56 IPVLPFLSFLIN 91
              V PFLSFLIN
Sbjct:  272 XXVXPFLSFLIN 307

HSP 7 
Score: 75.7553 bits (159), Expect = 2.22691e-26
Identity = 32/34 (94.12%), Postives = 32/34 (94.12%), Query Frame = 2
Query:  317 FVLELRVNNSXSWQHGSMLELYRSLVFPLNSRIL 418
            FVLELRVNNS SWQHGSMLELYRSLVF LNSRIL
Sbjct:  370 FVLELRVNNSQSWQHGSMLELYRSLVFQLNSRIL 471

HSP 8 
Score: 46.43 bits (95), Expect = 2.22691e-26
Identity = 18/21 (85.71%), Postives = 20/21 (95.24%), Query Frame = 1
Query:  103 SQPVDLKKHPSGIVPTLQNIV 165
            SQPVDLKKHPSGIVPTLQ ++
Sbjct:  316 SQPVDLKKHPSGIVPTLQFVL 378

HSP 9 
Score: 34.0583 bits (68), Expect = 2.22691e-26
Identity = 14/16 (87.50%), Postives = 14/16 (87.50%), Query Frame = 3
Query:   45 VKEEFIRKERNGRTGI 92
            VKEEFIRKERNG T I
Sbjct:  261 VKEEFIRKERNGXTXI 308

HSP 10 
Score: 62.4673 bits (130), Expect = 5.01087e-16
Identity = 27/34 (79.41%), Postives = 27/34 (79.41%), Query Frame = 3
Query:  318 LYWS*EXXXXXXGSTEVCSNYTEAWFSR*IQGF* 419
            LYWS*E      GSTEVCSNYTEAWFS *IQGF*
Sbjct:  371 LYWS*E*TTVKVGSTEVCSNYTEAWFSS*IQGF* 472

HSP 11 
Score: 40.4733 bits (82), Expect = 5.01087e-16
Identity = 17/19 (89.47%), Postives = 18/19 (94.74%), Query Frame = 2
Query:   98 EGANQLISRSTLLGLSLPF 154
            +GANQ ISRSTLLGLSLPF
Sbjct:  311 KGANQXISRSTLLGLSLPF 367

HSP 12 
Score: 52.3867 bits (108), Expect = 8.24679e-15
Identity = 21/22 (95.45%), Postives = 21/22 (95.45%), Query Frame = -2
Query:  352 KILEFSGKTKLLYNSSILPCCQ 417
            KILEFS KTKLLYNSSILPCCQ
Sbjct:  405 KILEFSWKTKLLYNSSILPCCQ 470

HSP 13 
Score: 46.43 bits (95), Expect = 8.24679e-15
Identity = 18/19 (94.74%), Postives = 18/19 (94.74%), Query Frame = -2
Query:  100 LKGRDNPRRVLLEINWLAP 156
            LKGRDNPRRVLLEI WLAP
Sbjct:  313 LKGRDNPRRVLLEIXWLAP 369

HSP 14 
Score: 67.9658 bits (142), Expect = 9.02272e-12
Identity = 33/44 (75.00%), Postives = 35/44 (79.55%), Query Frame = -1
Query:  287 *NP*I*RENQASV*FEHTSVLPTXTVVHS*LQYKPSSQKQXSRL 418
            *NP*I* ENQASV*FEHTSVLPT TVVHS*LQYK   +    R+
Sbjct:  340 *NP*I*LENQASV*FEHTSVLPTLTVVHS*LQYKLKGRDNPRRV 471

Oall_contig1190_v27.0822e-1396.67%
Oall_contig1190_v2
HSP 1 
Score: 71.6314 bits (150), Expect = 7.0822e-13
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 2
Query:    2 DHQTLAQTTSN*RESKRRIYKKRKEWQNRD 91
            DHQTLAQT SN*RESKRRIYKKRKEWQNRD
Sbjct:  225 DHQTLAQTPSN*RESKRRIYKKRKEWQNRD 314

HSP 2 
Score: 70.2568 bits (147), Expect = 1.83642e-12
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 3
Query:    3 IIKP*HRQHQIKERVKEEFIRKERNGRTGI 92
            IIKP*HR HQIKERVKEEFIRKERNGRTGI
Sbjct:  226 IIKP*HRHHQIKERVKEEFIRKERNGRTGI 315

Blast Hits to Populus Trichocarpa Proteins

Analysis Date: 11-18-2009 (Blast: RO454_contigs_v2_vs_PopulusProt_JamboreeModels1_1)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
estExt_Genewise1_v1.C_LG_XIII20482.5189e-10294.03%
jgi|Poptr1_1|730014|estExt_Genewise1_v1.C_LG_XIII2048
HSP 1 
Score: 368.622 bits (945), Expect = 2.5189e-102
Identity = 189/201 (94.03%), Postives = 192/201 (95.52%), Query Frame = 1
Query:   76 MAEQGLGGRSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIXLTGAKVRDETYTAFENIYPVLTEFRKNQQ 678
            MAEQG    SQPVDL KHPSGIVPTLQNIVSTVNLDCKL+LK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGF AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKI +TGAKVR+ETYTAFENIYPVLTEFRK QQ
Sbjct:    1 MAEQGGLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLELKQIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFAAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVREETYTAFENIYPVLTEFRKVQQ 201

estExt_fgenesh4_pg.C_LG_XIX03935.61151e-10293.53%
jgi|Poptr1_1|826131|estExt_fgenesh4_pg.C_LG_XIX0393
HSP 1 
Score: 367.466 bits (942), Expect = 5.61151e-102
Identity = 188/201 (93.53%), Postives = 191/201 (95.02%), Query Frame = 1
Query:   76 MAEQGLGGRSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIXLTGAKVRDETYTAFENIYPVLTEFRKNQQ 678
            MAEQG    SQPVDL KHPSGIVP LQNIVSTVNLDC+LDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGF AKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPE+FPGLIYRMKQPKIVLLIFVSGKI +TGAKVRDETYTAFENIYPVLTEFRK QQ
Sbjct:    1 MAEQGGLEGSQPVDLSKHPSGIVPILQNIVSTVNLDCRLDLKQIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFAAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPEIFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQQ 201

eugene3.001903833.25362e-2584.62%
jgi|Poptr1_1|573909|eugene3.00190383
HSP 1 
Score: 112.464 bits (280), Expect = 3.25362e-25
Identity = 55/65 (84.62%), Postives = 57/65 (87.69%), Query Frame = 1
Query:  484 SHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIXLTGAKVRDETYTAFENIYPVLTEFRKNQQ 678
            S      YEPE+FPGLIYRMKQPKIVLLIFVSGKI +TGAKVRDETYTAFENIYPVLTEFRK QQ
Sbjct:    5 SRARLVQYEPEIFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQQ 69

Blast Hits to TAIR7 Peptides

Analysis Date: 11-18-2009 (Blast: RO454_contigs_v2_vs_TAIR7_pep_20070425)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
AT1G55520.2 3.82635e-10092.04%
TBP2 (TATA binding protein 2); DNA binding / RNA polymerase II transcription factor | chr1:20729816-20731149 REVERSE
HSP 1 
Score: 361.303 bits (926), Expect = 3.82635e-100
Identity = 185/201 (92.04%), Postives = 190/201 (94.53%), Query Frame = 1
Query:   76 MAEQGLGGRSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIXLTGAKVRDETYTAFENIYPVLTEFRKNQQ 678
            MA+QG  G SQPVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSE  SKLAARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH AFSSYEPELFPGLIYRMK PKIVLLIFVSGKI +TGAK+R+ETYTAFENIYPVL EFRK QQ
Sbjct:    1 MADQGTEG-SQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEHLSKLAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHSAFSSYEPELFPGLIYRMKLPKIVLLIFVSGKIVITGAKMREETYTAFENIYPVLREFRKVQQ 200

AT1G55520.1 3.82635e-10092.04%
TBP2 (TATA binding protein 2); DNA binding / RNA polymerase II transcription factor | chr1:20729816-20731149 REVERSE
HSP 1 
Score: 361.303 bits (926), Expect = 3.82635e-100
Identity = 185/201 (92.04%), Postives = 190/201 (94.53%), Query Frame = 1
Query:   76 MAEQGLGGRSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIXLTGAKVRDETYTAFENIYPVLTEFRKNQQ 678
            MA+QG  G SQPVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSE  SKLAARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH AFSSYEPELFPGLIYRMK PKIVLLIFVSGKI +TGAK+R+ETYTAFENIYPVL EFRK QQ
Sbjct:    1 MADQGTEG-SQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEHLSKLAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHSAFSSYEPELFPGLIYRMKLPKIVLLIFVSGKIVITGAKMREETYTAFENIYPVLREFRKVQQ 200

AT3G13445.1 1.899e-9991.04%
TBP1 (TRANSCRIPTION FACTOR IID-1); DNA binding / RNA polymerase II transcription factor | chr3:4380324-4381876 FORWARD
HSP 1 
Score: 358.992 bits (920), Expect = 1.899e-99
Identity = 183/201 (91.04%), Postives = 189/201 (94.03%), Query Frame = 1
Query:   76 MAEQGLGGRSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIXLTGAKVRDETYTAFENIYPVLTEFRKNQQ 678
            M +QGL G S PVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSE  SK+AARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH AFSSYEPELFPGLIYRMK PKIVLLIFVSGKI +TGAK+RDETY AFENIYPVL+EFRK QQ
Sbjct:    1 MTDQGLEG-SNPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDETYKAFENIYPVLSEFRKIQQ 200

AT3G13445.2 7.48492e-8892.13%
TBP1 (TRANSCRIPTION FACTOR IID-1); DNA binding / RNA polymerase II transcription factor | chr3:4380324-4381658 FORWARD
HSP 1 
Score: 320.472 bits (820), Expect = 7.48492e-88
Identity = 164/178 (92.13%), Postives = 168/178 (94.38%), Query Frame = 1
Query:   76 MAEQGLGGRSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIXLTGAKV 609
            M +QGL G S PVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSE  SK+AARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH AFSSYEPELFPGLIYRMK PKIVLLIFVSGKI +TGAKV
Sbjct:    1 MTDQGLEG-SNPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKV 177

Blast Hits to Contigs V2 WO454

Analysis Date: 11-18-2009 (Blast: RO454_contigs_v2_vs_WO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
WO454_contig19061_v21.43158e-9595.17%
WO454_contig19061_v2
HSP 1 
Score: 345.182 bits (747), Expect = 1.43158e-95
Identity = 138/145 (95.17%), Postives = 139/145 (95.86%), Query Frame = -2
Query:  433 TTTSEPRKLNADTEHIFFNFKTREPMHNLLLYLQFNPGSAATLPGIPPPNFCKQDLASLPTKSLLVFPELCKHRVYVLKGCIGLISHLSSCXXDFS*HENKQHNLWLFHAIDQPWEQLWLITRKGTMGICQSFKPDGEFNIT*TN 867
            TTTSEPRK NADTEHIFFN K REPMHNLLLYLQFNPGSAATLPGIPPPNFCKQDLASLPTKSLLVFPELCKHRVYVLKGCIGLISHLSS   DFS*H+NKQHNLWLFHAIDQPWEQLWLITRKGTMGICQSFKPDGEFNIT*TN
Sbjct:    3 TTTSEPRKXNADTEHIFFNLKXREPMHNLLLYLQFNPGSAATLPGIPPPNFCKQDLASLPTKSLLVFPELCKHRVYVLKGCIGLISHLSSXKNDFS*HKNKQHNLWLFHAIDQPWEQLWLITRKGTMGICQSFKPDGEFNIT*TN 437

HSP 2 
Score: 338.309 bits (732), Expect = 1.67816e-93
Identity = 141/145 (97.24%), Postives = 141/145 (97.24%), Query Frame = -3
Query:  432 LLHQSQEN*MQTLNTSFLTSKPENRCTICFYIYSSIQAQQLHCQVFHLLTFANKIWLLFPQNHCWFFLNSVSTGYMFSKAV*VSSLTLAPVRXIFPDTKISSTIFGCFMR*INPGNSSGS*LEKAPWEYASPSSLMGNLTSHEPT 866
            LLHQSQEN MQTLNTSFLT K ENRCTICFYIYSSIQAQQLHCQVFHLLTFANKIWLLFPQNHCWFFLNSVSTGYMFSKAV*VSSLTLAPVR IFPDTKISSTIFGCFMR*INPGNSSGS*LEKAPWEYASPSSLMGNLTSHEPT
Sbjct:    2 LLHQSQENXMQTLNTSFLT*KXENRCTICFYIYSSIQAQQLHCQVFHLLTFANKIWLLFPQNHCWFFLNSVSTGYMFSKAV*VSSLTLAPVRTIFPDTKISSTIFGCFMR*INPGNSSGS*LEKAPWEYASPSSLMGNLTSHEPT 436

HSP 3 
Score: 336.476 bits (728), Expect = 5.97822e-93
Identity = 142/145 (97.93%), Postives = 142/145 (97.93%), Query Frame = 1
Query:  433 VGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIXLTGAKVRDETYTAFENIYPVLTEFRKNQQ*FCGKRSQILFAKVRRWNTWQCSC*AWIEL*I*KQIVHRFSGFEVKKDVFSVCI*FSWL*CSS 867
            VGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKI LTGAKVRDETYTAFENIYPVLTEFRKNQQ*FCGKRSQILFAKVRRWNTWQCSC*AWIEL*I*KQIVHRFS F VKKDVFSVCI*FSWL*CSS
Sbjct:    3 VGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ*FCGKRSQILFAKVRRWNTWQCSC*AWIEL*I*KQIVHRFSXF*VKKDVFSVCI*FSWL*CSS 437

HSP 4 
Score: 331.894 bits (718), Expect = 1.43191e-91
Identity = 140/146 (95.89%), Postives = 140/146 (95.89%), Query Frame = 2
Query:  431 *LVHVMLNSPSGLKDWHIPMVPFLVMSQSCSQG*SIA*NNQRLCCLFSCQEKSFXQELR*EMRPIQPLRTYTRCLQSSGKTSNDFVGREARSCLQKLGGGIPGNVAAEPGLNCKYKSKLCIGSLVLKLKKMCSVSAFNFLGSDVVV 868
            *LVHVMLNSPSGLKDWHIPMVPFLVMSQSCSQG*SIA*NNQRLCCLF CQEKSF  ELR*EMRPIQPLRTYTRCLQSSGKTSNDFVGREARSCLQKLGGGIPGNVAAEPGLNCKYKSKLCIGSL  KLKKMCSVSAF FLGSDVVV
Sbjct:    1 *LVHVMLNSPSGLKDWHIPMVPFLVMSQSCSQG*SIA*NNQRLCCLFLCQEKSFLXELR*EMRPIQPLRTYTRCLQSSGKTSNDFVGREARSCLQKLGGGIPGNVAAEPGLNCKYKSKLCIGSLXFKLKKMCSVSAFXFLGSDVVV 438

HSP 5 
Score: 323.646 bits (700), Expect = 4.35249e-89
Identity = 143/147 (97.28%), Postives = 145/147 (98.64%), Query Frame = -1
Query:  431 SHYYIRAKKIKCRH*THLF*LQNQRTDAQFAFIFTVQSRLSSYIARYSTS*LLQTRSGFSSHKIIAGFS*TL*APGICSQRLYRSHLSP*LL*ERFFLTRK*AAQSLVVSCDRSTLGTALAHN*KRHHGNMPVLQA*WGI*HHMNQL 871
            SHYYIRAKKIKCRH*THLF*L+ QRTDAQFAFIFTVQSRLSSYIARYSTS*LLQTRSGFSSHKIIAGFS*TL*APGICSQRLYRSHLSP*L *ERFFLT+K*AAQSLVVSCDRSTLGTALAHN*KRHHGNMPVLQA*WGI*HHMNQL
Sbjct:    1 SHYYIRAKKIKCRH*THLF*LKXQRTDAQFAFIFTVQSRLSSYIARYSTS*LLQTRSGFSSHKIIAGFS*TL*APGICSQRLYRSHLSP*LX*ERFFLTQK*AAQSLVVSCDRSTLGTALAHN*KRHHGNMPVLQA*WGI*HHMNQL 441

HSP 6 
Score: 310.816 bits (672), Expect = 3.16887e-85
Identity = 139/145 (95.86%), Postives = 139/145 (95.86%), Query Frame = 3
Query:  432 SWFM*C*IPHQA*RTGIFPWCLF*L*ARAVPRVDLSHETTKDCAAYFRVRKNXSXRS*GER*DLYSL*EHIPGAYRVQEKPAMILWEEKPDLVCKS*EVEYLAM*LLSLD*TVNIKANCASVLWF*S*KRCVQCLHLIFLALM** 866
            SWFM*C*IPHQA*RTGIFPWCLF*L*ARAVPRVDLSHETTKDCAAYF VRKN S  S*GER*DLYSL*EHIPGAYRVQEKPAMILWEEKPDLVCKS*EVEYLAM*LLSLD*TVNIKANCASVL F S*KRCVQCLHLIFLALM**
Sbjct:    2 SWFM*C*IPHQA*RTGIFPWCLF*L*ARAVPRVDLSHETTKDCAAYFCVRKNRSYXS*GER*DLYSL*EHIPGAYRVQEKPAMILWEEKPDLVCKS*EVEYLAM*LLSLD*TVNIKANCASVLXFLS*KRCVQCLHLIFLALM** 436

WO454_contig537_v21.1526e-2696.67%
WO454_contig537_v2
HSP 1 
Score: 71.6314 bits (150), Expect = 1.1526e-26
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 2
Query:    2 DHQTLAQTTSN*RESKRRIYKKRKEWQNRD 91
            DHQTLAQT SN*RESKRRIYKKRKEWQNRD
Sbjct:   81 DHQTLAQTXSN*RESKRRIYKKRKEWQNRD 170

HSP 2 
Score: 64.7583 bits (135), Expect = 1.1526e-26
Identity = 23/25 (92.00%), Postives = 24/25 (96.00%), Query Frame = 3
Query:   99 KEPTS*SQEAPFWDCPYPSEHCVXS 173
            +EPTS*SQEAPFWDCPYPSEHCV S
Sbjct:    2 REPTS*SQEAPFWDCPYPSEHCVYS 76

HSP 3 
Score: 69.7986 bits (146), Expect = 3.23498e-24
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 3
Query:    3 IIKP*HRQHQIKERVKEEFIRKERNGRTGI 92
            IIKP*HR HQIKERVKEEFIRKERNGRTGI
Sbjct:   80 IIKP*HRXHQIKERVKEEFIRKERNGRTGI 169

HSP 4 
Score: 58.3434 bits (121), Expect = 3.23498e-24
Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 1
Query:  103 SQPVDLKKHPSGIVPTLQNIVSTV 174
            SQPVDLKKHPSGIVPTLQNIVSTV
Sbjct:    1 SQPVDLKKHPSGIVPTLQNIVSTV 72

HSP 5 
Score: 64.7583 bits (135), Expect = 2.21349e-18
Identity = 24/25 (96.00%), Postives = 24/25 (96.00%), Query Frame = -2
Query:  100 YCXHNVLKGRDNPRRVLLEINWLAP 174
            YC HNVLKGRDNPRRVLLEINWLAP
Sbjct:    1 YCRHNVLKGRDNPRRVLLEINWLAP 75

HSP 6 
Score: 43.6807 bits (89), Expect = 2.21349e-18
Identity = 20/33 (60.61%), Postives = 20/33 (60.61%), Query Frame = -3
Query:    3 LPPNPCSAIPXXXXXXXXXXXFNLMLSVLGFDD 101
            LP NPCSAIP           FNLM SVLGFDD
Sbjct:   71 LPSNPCSAIPFFSYKFFFYSLFNLMXSVLGFDD 169

HSP 7 
Score: 61.5509 bits (128), Expect = 1.62166e-13
Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = -3
Query:  102 TVDTMF*RVGTIPEGCFLRSTGWL 173
            TVDTMF*RVGTIPEGCFLRSTGWL
Sbjct:    2 TVDTMF*RVGTIPEGCFLRSTGWL 73

HSP 8 
Score: 30.3927 bits (60), Expect = 1.62166e-13
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = -1
Query:   56 IPVLPFLSFLIN 91
            IPVLPFLSFLIN
Sbjct:   81 IPVLPFLSFLIN 116

tags