RO454_contig7857_v2

NameRO454_contig7857_v2
AccessionID3077206
Sequence
GTTTAAGGGAATGTTCTCTTACTTCTTCCCAAGGAATTGTCCCATTCGAG
CTTCCCATCGACCACATTTGTGCAGGGTTACACCTCTGTATTTTGAGCTC
CCTCGTGCGAATCCAGTGCTTTGACGACGAAGAATATGAATAAATTCTTC
CTTAGTCATATTCCTGGTCTGTTTCATATCATCCGCATAATCGCTTACAC
TATAATTGATATCAGCATCAATcCCCCGGAACTTAATTGCAGCTCGATCA
TATGCTCTAGCCGCAGCATGAGCAGTGTCAAATCCACCTAAATATACTTG
CTTTCCACAATCCCATATATGTGATTCCCATCGCCCGGTTCTCCGGTAAA
ACGTTACGCCCCGGTACTGAGAGCTCCGGGACCTAGGTCCCCGTCTACTT
TTCCTGGCTTGCTGTTGCTTCTGCTG
Length426
Typecontig
Organism Red Oak

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References

Dababase Accession
GFF_source SeqManPro

ESTs in this contig

Type Feature Position
EST ROB_040305_3599_1755 0-218
EST ROB_071633_1303_2700 72-303
EST ROB_036361_3752_2682 181-426

GO terms assigned to this feature

Accession Category Term
GO:0003677 molecular_function DNA binding
GO:0003700 molecular_function transcription factor activity

KEGG Analysis

Analysis Date: 11-25-2009 (KEGG: RO454_v2)
K09284 AP2; AP2-like factor, euAP2 lineage

InterProScan Analysis

Analysis Date: 11-19-2009 (Interpro: RO454_contigs_v2)
SEQUENCE: RO454_contig7857_v2_1_ORF2 CRC64: CC8486EA133AA21E LENGTH: 64 aa
noIPR
unintegrated
unintegrated
seg [28-41]? NA seg seg[49-63]? NA seg seg seg
SEQUENCE: RO454_contig7857_v2_4_ORF1 CRC64: 5FC2EF95709F0A95 LENGTH: 135 aa
InterPro
IPR001471
Domain
Pathogenesis-related transcriptional factor/ERF, DNA-binding
G3DSA:3.30.730.10 [19-79]T 2.4e-12 G3DSA:3.30.730.10 no description no description
PF00847 [19-69]T 7.7e-16 PF00847 AP2 AP2
SM00380 [20-82]T 1.6e-29 SM00380 no description no description
PS51032 [20-76]T 17.451 PS51032 AP2_ERF AP2_ERF
InterPro
IPR016177
Domain
DNA-binding, integrase-type
SSF54171 [19-79]T 1.4e-17 SSF54171 DNA-binding domain[111-135]T 0.0039 SSF54171 DNA-binding domain DNA-binding domain
noIPR
unintegrated
unintegrated
seg [1-6]? NA seg seg[8-22]? NA seg seg[52-63]? NA seg seg seg
SEQUENCE: RO454_contig7857_v2_5_ORF2 CRC64: 676C977C67332C97 LENGTH: 50 aa
No hits reported.
SEQUENCE: RO454_contig7857_v2_1_ORF2 CRC64: CC8486EA133AA21E LENGTH: 64 aa
noIPR
unintegrated
unintegrated
SEGseg seg
 NA [28-41]?   NA [49-63]?     
Parent no parent
Children no children
Found in no entries
Contains no entries
GO terms none
SEQUENCE: RO454_contig7857_v2_4_ORF1 CRC64: 5FC2EF95709F0A95 LENGTH: 135 aa
InterPro
IPR001471
Domain
Pathogenesis-related transcriptional factor/ERF, DNA-binding
GENE3DG3DSA:3.30.730.10no description
 2.4e-12 [19-79]T       
PFAMPF00847AP2
 7.7e-16 [19-69]T       
SMARTSM00380no description
 1.6e-29 [20-82]T       
PROFILEPS51032AP2_ERF
 17.451 [20-76]T       
Parent IPR016177
Children no children
Found in IPR017392
Contains no entries
GO terms Molecular Function: transcription factor activity (GO:0003700)
InterPro
IPR016177
Domain
DNA-binding, integrase-type
SUPERFAMILYSSF54171DNA-binding domain
 1.4e-17 [19-79]T   0.0039 [111-135]T     
Parent no parent
Children IPR001471 IPR001739 IPR004191 IPR015094
Found in no entries
Contains no entries
GO terms Molecular Function: DNA binding (GO:0003677)
noIPR
unintegrated
unintegrated
SEGseg seg
 NA [1-6]?   NA [8-22]?   NA [52-63]?   
Parent no parent
Children no children
Found in no entries
Contains no entries
GO terms none
SEQUENCE: RO454_contig7857_v2_5_ORF2 CRC64: 676C977C67332C97 LENGTH: 50 aa
No hits reported.

Blast Hits to Uniprot

Analysis Date: 11-18-2009 (Blast: RO454_v2_uniprot)
Best 10 Hits Shown | Show Best 25 Hits | Show All Hits
Note: Click a description for more details.
Match Name E value Identity
O65008_MAIZE9.89018e-5082.30%
Indeterminate spikelet 1 (Fragment) OS=Zea mays GN=ids1 PE=2 SV=1
HSP 1 
Score: 199.134 bits (505), Expect = 9.89018e-50
Identity = 93/113 (82.30%), Postives = 98/113 (86.73%), Query Frame = -1
Query:   22 GVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK 360
            GVTFYRRTGRWESHIWDCGKQVYLGGFDT           AIKFRG+DADIN+S+SDY DD+KQ RN TKEEF+HILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQ LGKK
Sbjct:  115 GVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGLDADINFSLSDYEDDLKQMRNWTKEEFVHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQLLGKK 227

B9MT78_POPTR2.8776e-4980.53%
AP2 domain-containing transcription factor OS=Populus trichocarpa GN=RAP6 PE=4 SV=1
HSP 1 
Score: 197.593 bits (501), Expect = 2.8776e-49
Identity = 91/113 (80.53%), Postives = 99/113 (87.61%), Query Frame = -1
Query:   22 GVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK 360
            GVTFYRRTGRWESHIWDCGKQVYLGGFDT           AIKFRG+DADIN++V+DY +D+KQ RN TKEEF+HILRRQSTGF+RGSSKYRGVTLHKCGRWEARMGQFLGKK
Sbjct:  166 GVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARVYDRAAIKFRGVDADINFNVTDYDEDIKQMRNFTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKK 278

B9HLZ7_POPTR3.75826e-4979.65%
AP2 domain-containing transcription factor OS=Populus trichocarpa GN=RAP3 PE=4 SV=1
HSP 1 
Score: 197.208 bits (500), Expect = 3.75826e-49
Identity = 90/113 (79.65%), Postives = 99/113 (87.61%), Query Frame = -1
Query:   22 GVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK 360
            GVTFYRRTGRWESHIWDCGKQVYLGGFDT           AIKFRG+DADIN+++SDY +DMKQ +N+ KEEF+HILRRQSTGF+RGSSKYRGVTLHKCGRWEARMGQFLGKK
Sbjct:  172 GVTFYRRTGRWESHIWDCGKQVYLGGFDTAHTAARAYDRAAIKFRGVDADINFNLSDYEEDMKQMKNLNKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKK 284

A7PIB5_VITVI3.75826e-4979.65%
Chromosome chr13 scaffold_17, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00018277001 PE=4 SV=1
HSP 1 
Score: 197.208 bits (500), Expect = 3.75826e-49
Identity = 90/113 (79.65%), Postives = 98/113 (86.73%), Query Frame = -1
Query:   22 GVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK 360
            GVTFYRRTGRWESHIWDCGKQVYLGGFDT           AIKFRG+DADIN+S+SDY +DMKQ +N+ KEEF+HILRRQS GF+RGSSKYRGVTLHKCGRWEARMGQFLGKK
Sbjct:  168 GVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFSISDYEEDMKQMKNLNKEEFVHILRRQSNGFSRGSSKYRGVTLHKCGRWEARMGQFLGKK 280

Q8H443_ORYSJ4.90844e-4980.53%
Os07g0235800 protein OS=Oryza sativa subsp. japonica GN=P0407H12.124 PE=2 SV=1
HSP 1 
Score: 196.823 bits (499), Expect = 4.90844e-49
Identity = 91/113 (80.53%), Postives = 98/113 (86.73%), Query Frame = -1
Query:   22 GVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK 360
            GVTFYRRTGRWESHIWDCGKQVYLGGFDT           AIKFRG+DADIN++++DY DD+KQ RN TKEEF+HILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQ LGKK
Sbjct:  125 GVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGLDADINFNLNDYEDDLKQMRNWTKEEFVHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQLLGKK 237

B8B8J2_ORYSI4.90844e-4980.53%
Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_25450 PE=4 SV=1
HSP 1 
Score: 196.823 bits (499), Expect = 4.90844e-49
Identity = 91/113 (80.53%), Postives = 98/113 (86.73%), Query Frame = -1
Query:   22 GVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK 360
            GVTFYRRTGRWESHIWDCGKQVYLGGFDT           AIKFRG+DADIN++++DY DD+KQ RN TKEEF+HILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQ LGKK
Sbjct:  125 GVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGLDADINFNLNDYEDDLKQMRNWTKEEFVHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQLLGKK 237

B9HU09_POPTR6.41063e-4979.65%
AP2 domain-containing transcription factor OS=Populus trichocarpa GN=RAP4 PE=4 SV=1
HSP 1 
Score: 196.438 bits (498), Expect = 6.41063e-49
Identity = 90/113 (79.65%), Postives = 99/113 (87.61%), Query Frame = -1
Query:   22 GVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK 360
            GVTFYRRTGRWESHIWDCGKQVYLGGFDT           AIKFRG+DADIN++ SDY +DMKQ +N++KEEF+HILRRQSTGF+RGSSKYRGVTLHKCGRWEARMGQFLGKK
Sbjct:  171 GVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNSSDYEEDMKQMKNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKK 283

Q84U24_ANTMA8.37254e-4978.76%
LIPLESS1 OS=Antirrhinum majus GN=lip1 PE=2 SV=1
HSP 1 
Score: 196.052 bits (497), Expect = 8.37254e-49
Identity = 89/113 (78.76%), Postives = 98/113 (86.73%), Query Frame = -1
Query:   22 GVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK 360
            GVTFYRRTGRWESHIWDCGKQVYLGGFDT           AIKFRG++ADIN+S+ DY +D+KQ RN+TKEEF+H+LRRQSTGF RGSSKYRGVTLHKCGRWEARMGQFLGKK
Sbjct:  141 GVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFSLEDYEEDLKQMRNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKK 253

C5WV31_SORBI8.37254e-4980.53%
Putative uncharacterized protein Sb01g003400 OS=Sorghum bicolor GN=Sb01g003400 PE=4 SV=1
HSP 1 
Score: 196.052 bits (497), Expect = 8.37254e-49
Identity = 91/113 (80.53%), Postives = 97/113 (85.84%), Query Frame = -1
Query:   22 GVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK 360
            GVTFYRRTGRWESHIWDCGKQVYLGGFDT           AIKFRG++ADIN+S+ DY DD+KQ RN TKEEF+HILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQ LGKK
Sbjct:  115 GVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGLEADINFSLGDYEDDLKQMRNWTKEEFVHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQLLGKK 227

C0P4Y8_MAIZE8.37254e-4980.53%
Putative uncharacterized protein OS=Zea mays PE=2 SV=1
HSP 1 
Score: 196.052 bits (497), Expect = 8.37254e-49
Identity = 91/113 (80.53%), Postives = 96/113 (84.96%), Query Frame = -1
Query:   22 GVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK 360
            GVTFYRRTGRWESHIWDCGKQVYLGGFDT           AIKFRG+DADIN+ + DY DD+KQ RN TKEEF+HILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQ LGKK
Sbjct:  207 GVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGLDADINFQLKDYEDDLKQMRNWTKEEFVHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQLLGKK 319

Blast Hits to Contigs V2 AB454

Analysis Date: 11-18-2009 (Blast: RO454_contigs_v2_vs_AB454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
AB454_contig6024_v21.94299e-1774.47%
AB454_contig6024_v2
HSP 1 
Score: 82.6285 bits (174), Expect = 1.94299e-17
Identity = 35/47 (74.47%), Postives = 37/47 (78.72%), Query Frame = 2
Query:  275 VSNPPKYTCFPQSHICDSHRPVLR*NVTPRY*ELRDLGPRLLFLACC 415
            VSNPP+ TCFPQSH+ DS RPVLR*NVTPRY EL DLGP  LF   C
Sbjct:  109 VSNPPR*TCFPQSHM*DSQRPVLR*NVTPRYCELLDLGPLRLFFMGC 249

HSP 2 
Score: 81.712 bits (172), Expect = 3.70217e-17
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = -1
Query:  274 GVTFYRRTGRWESHIWDCGKQVYLGGFDT 360
            GVTFYRRTGRWESHIWDCGKQVYLGGFDT
Sbjct:  164 GVTFYRRTGRWESHIWDCGKQVYLGGFDT 250

AB454_contig6584_v22.4898e-1241.07%
AB454_contig6584_v2
HSP 1 
Score: 65.6747 bits (137), Expect = 2.4898e-12
Identity = 23/56 (41.07%), Postives = 41/56 (73.21%), Query Frame = -1
Query:   70 IKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLH 237
            +K+ G    IN+ + +Y  +++  +NM+++E++  LRR+S+GF+RG+S YRGVT H
Sbjct:   54 LKYWGPSTHINFPLENYQTELEDMKNMSRQEYVAHLRRKSSGFSRGASMYRGVTRH 221

Blast Hits to Contigs V2 ABall

Analysis Date: 11-18-2009 (Blast: RO454_contigs_v2_vs_ABall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
ABall_contig6115_v21.9799e-1774.47%
ABall_contig6115_v2
HSP 1 
Score: 82.6285 bits (174), Expect = 1.9799e-17
Identity = 35/47 (74.47%), Postives = 37/47 (78.72%), Query Frame = 2
Query:  275 VSNPPKYTCFPQSHICDSHRPVLR*NVTPRY*ELRDLGPRLLFLACC 415
            VSNPP+ TCFPQSH+ DS RPVLR*NVTPRY EL DLGP  LF   C
Sbjct:  109 VSNPPR*TCFPQSHM*DSQRPVLR*NVTPRYCELLDLGPLRLFFMGC 249

HSP 2 
Score: 81.712 bits (172), Expect = 3.7725e-17
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = -1
Query:  274 GVTFYRRTGRWESHIWDCGKQVYLGGFDT 360
            GVTFYRRTGRWESHIWDCGKQVYLGGFDT
Sbjct:  164 GVTFYRRTGRWESHIWDCGKQVYLGGFDT 250

ABall_contig6681_v22.5371e-1241.07%
ABall_contig6681_v2
HSP 1 
Score: 65.6747 bits (137), Expect = 2.5371e-12
Identity = 23/56 (41.07%), Postives = 41/56 (73.21%), Query Frame = -1
Query:   70 IKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLH 237
            +K+ G    IN+ + +Y  +++  +NM+++E++  LRR+S+GF+RG+S YRGVT H
Sbjct:   54 LKYWGPSTHINFPLENYQTELEDMKNMSRQEYVAHLRRKSSGFSRGASMYRGVTRH 221

Blast Hits to Contigs V2 AC454

Analysis Date: 11-18-2009 (Blast: RO454_contigs_v2_vs_AC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
AC454_contig5246_v21.47848e-4072.92%
AC454_contig5246_v2
HSP 1 
Score: 90.418 bits (191), Expect = 1.47848e-40
Identity = 35/48 (72.92%), Postives = 37/48 (77.08%), Query Frame = -1
Query:  217 GVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXAIKFRGID 360
            GVTFYRRTGRWESHIWDCGKQVYLGGFDT           AIKFRG++
Sbjct:  161 GVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVE 304

HSP 2 
Score: 85.8359 bits (181), Expect = 1.47848e-40
Identity = 32/39 (82.05%), Postives = 36/39 (92.31%), Query Frame = -1
Query:   61 MKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCG 177
            +KQ  N+TKEEF+H+LRRQSTGF RGSSKYRGVTLHKCG
Sbjct:    2 LKQMNNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCG 118

HSP 3 
Score: 22.1449 bits (42), Expect = 1.47848e-40
Identity = 6/14 (42.86%), Postives = 10/14 (71.43%), Query Frame = -1
Query:  172 DINYSVSDYADDMK 213
            DIN+ + DY +D +
Sbjct:  114 DINFRIEDYEEDFE 155

HSP 4 
Score: 90.8762 bits (192), Expect = 1.02775e-32
Identity = 40/64 (62.50%), Postives = 43/64 (67.19%), Query Frame = 2
Query:  224 PRNLIXXXXXXXXXXXXVSNPPKYTCFPQSHICDSHRPVLR*NVTPRY*ELRDLGPRLLFLACC 415
            PRNL+            VSNPP+ TCFPQSH+ DS RPVLR*NVTPRY EL DLGPR LF   C
Sbjct:  168 PRNLMAALSYARAAACAVSNPPR*TCFPQSHM*DSQRPVLR*NVTPRYCELLDLGPRRLFFMGC 359

HSP 5 
Score: 63.8419 bits (133), Expect = 1.02775e-32
Identity = 26/38 (68.42%), Postives = 28/38 (73.68%), Query Frame = 2
Query:   62 PHLCRVTPLYFELPRANPVL*RRRI*INSSLVIFLVCF 175
            PHLC+VTPLY ELP  NPVL RR  * NSSLV   +CF
Sbjct:    3 PHLCKVTPLYLELPLGNPVLCRRST*TNSSLVRLFICF 116

HSP 6 
Score: 54.2195 bits (112), Expect = 1.29427e-17
Identity = 24/47 (51.06%), Postives = 33/47 (70.21%), Query Frame = -3
Query:  275 TASQEK*TGT*VPELSVPGRNVLPENRAMGITYMGLWKASIFRWI*H 415
            TA +E+   T V E +V   +VLPEN  +G+++MGLWKAS+  WI*H
Sbjct:  219 TAHEEEPPRTKV*EFTVSRCHVLPENWPLGVSHMGLWKASLSGWI*H 359

HSP 7 
Score: 49.6374 bits (102), Expect = 1.29427e-17
Identity = 20/39 (51.28%), Postives = 29/39 (74.36%), Query Frame = -3
Query:   62 YETDQEYD*GRIYSYSSSSKHWIRTRELKIQRCNPAQMW 178
            +E D++ D*GR+ S +S +KH I  R+L +QRCN AQ+W
Sbjct:    3 FEADEQPD*GRVCSRTSPTKHRIS*RKL*VQRCNLAQVW 119

HSP 8 
Score: 52.3867 bits (108), Expect = 4.79792e-15
Identity = 32/65 (49.23%), Postives = 36/65 (55.38%), Query Frame = -2
Query:  228 RSNSKPGKVDGDLGPGALSTGA*RFTGEPGDGNHIYGIVESKYI*VDLTLLMLRLEHMIELQLSS 422
            RS+S   +   D G G  S    RFTGE   G+  YGIVESK+I VDLTL M  L  MI    SS
Sbjct:  172 RSHSP*RRAAEDQGLGVHSIEVSRFTGELAAGSLTYGIVESKFIWVDLTLHMQLLVRMIGRPSSS 366

HSP 9 
Score: 42.7643 bits (87), Expect = 4.79792e-15
Identity = 22/39 (56.41%), Postives = 28/39 (71.79%), Query Frame = -2
Query:   63 I*NRPGI*LRKNLFIFFVVKALDSHEGAQNTEV*PCTNV 179
            +*+R   *LRK+LF +F  KA D  E A +TEV*PCT+V
Sbjct:    4 L*SR*TT*LRKSLFTYFADKAPDFLEEALSTEV*PCTSV 120

HSP 10 
Score: 48.2628 bits (99), Expect = 7.71373e-14
Identity = 22/39 (56.41%), Postives = 25/39 (64.10%), Query Frame = 3
Query:  267 HEQCQIHLNILAFHNPIYVIPIARFSGKTLRPGTESSGT 383
            H QCQIH + LAFHNPI   P  +FSGKT    T +S T
Sbjct:  211 HVQCQIHPDKLAFHNPICETPSGQFSGKT*HLDTVNS*T 327

HSP 11 
Score: 42.7643 bits (87), Expect = 7.71373e-14
Identity = 19/34 (55.88%), Postives = 24/34 (70.59%), Query Frame = 1
Query:   61 TTFVQGYTSVF*APSCESSALTTKNMNKFFLSHI 162
            +T VQGYTSV  A S +S AL+ K +NK FLS +
Sbjct:    2 STLVQGYTSVLRASSRKSGALSAKYVNKLFLSQV 103

AC454_contig32365_v22.00103e-1879.17%
AC454_contig32365_v2
HSP 1 
Score: 88.127 bits (186), Expect = 2.00103e-18
Identity = 38/48 (79.17%), Postives = 38/48 (79.17%), Query Frame = 2
Query:  275 VSNPPKYTCFPQSHICDSHRPVLR*NVTPRY*ELRDLGPRLLFLACCC 418
            VSNPPKYTCFPQS I DSHRPVL * VT RY*ELRDLGP LLF    C
Sbjct:   27 VSNPPKYTCFPQSQI*DSHRPVLL*KVTXRY*ELRDLGPLLLFFTGGC 170

HSP 2 
Score: 78.9628 bits (166), Expect = 1.15937e-15
Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = -1
Query:  274 VTFYRRTGRWESHIWDCGKQVYLGGFDT 357
            VTFYRRTGRWESHIWDCGKQVYLGGFDT
Sbjct:   26 VTFYRRTGRWESHIWDCGKQVYLGGFDT 109

HSP 3 
Score: 67.5076 bits (141), Expect = 3.22334e-12
Identity = 34/59 (57.63%), Postives = 37/59 (62.71%), Query Frame = 3
Query:  249 HML*PQHEQCQIHLNILAFHNPIYVIPIARFSGKTLRPGTESSGT*VPVYFSWLAVASA 425
            H L*PQHEQCQIH N LA HNP Y IPI +   +   PGTE+S T V  Y S  AV  A
Sbjct:    1 HRL*PQHEQCQIHPNTLASHNPKYEIPIDQSFYRK*XPGTENSETLVLSYSSSPAVVVA 177

HSP 4 
Score: 62.9255 bits (131), Expect = 7.79705e-11
Identity = 27/50 (54.00%), Postives = 37/50 (74.00%), Query Frame = -3
Query:  275 AEATASQEK*TGT*VPELSVPGRNVLPENRAMGITYMGLWKASIFRWI*H 424
            A  TA +E+*  T V E SVPG + L ++ +MGI+Y+GLW+AS+F WI*H
Sbjct:   27 ATTTAGEEE*ERTKVSEFSVPGCHFL*KDWSMGISYLGLWEASVFGWI*H 176

Blast Hits to Contigs V2 CC454

Analysis Date: 11-18-2009 (Blast: RO454_contigs_v2_vs_CC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
CC454_contig16685_v22.14406e-3187.72%
CC454_contig16685_v2
HSP 1 
Score: 132.115 bits (282), Expect = 2.14406e-31
Identity = 50/57 (87.72%), Postives = 55/57 (96.49%), Query Frame = -1
Query:   22 DYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK 192
            DY DD+KQ +N+TKEEF+HILRRQSTGF+RGSSKYRGVTLHKCGRWEARMGQFLGKK
Sbjct:  333 DYEDDLKQMKNLTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKK 503

HSP 2 
Score: 102.79 bits (218), Expect = 1.44227e-22
Identity = 40/54 (74.07%), Postives = 43/54 (79.63%), Query Frame = 2
Query:   14 FSYFFPRNCPIRASHRPHLCRVTPLYFELPRANPVL*RRRI*INSSLVIFLVCF 175
            + YFFPRNCPIRASHRPHLC VTP YFELP  NPVL RRR+  NSS V F +CF
Sbjct:  325 YIYFFPRNCPIRASHRPHLCSVTPRYFELPLENPVLCRRRMCTNSSFVKFFICF 486

HSP 3 
Score: 75.7553 bits (159), Expect = 1.98236e-14
Identity = 30/55 (54.55%), Postives = 41/55 (74.55%), Query Frame = -3
Query:   20 G*YETDQEYD*GRIYSYSSSSKHWIRTRELKIQRCNPAQMWSMGSSNGTIPWEEV 184
            G* ETD+E+D GRI ++ +S++HW+   ELKI   + AQMW MGSSNG +P E+V
Sbjct:  331 G*SETDEEFDKGRICAHPTSAEHWVLEGELKISGSDTAQMWPMGSSNGAVPREKV 495

HSP 4 
Score: 72.5479 bits (152), Expect = 1.83115e-13
Identity = 36/57 (63.16%), Postives = 40/57 (70.18%), Query Frame = -2
Query:   21 IMRMI*NRPGI*LRKNLFIFFVVKALDSHEGAQNTEV*PCTNVVDGKLEWDNSLGRS 191
            IMRMI*NR  I* RKNL   +V +AL S  GAQN   * CTNV DGKLEW +S G+S
Sbjct:  332 IMRMI*NR*RI*QRKNLCTSYVGRALGSRGGAQNIGE*HCTNVADGKLEWGSSSGKS 502

HSP 5 
Score: 67.5076 bits (141), Expect = 6.02564e-12
Identity = 30/54 (55.56%), Postives = 39/54 (72.22%), Query Frame = 1
Query:   13 VLLLLPKELSHSSFPSTTFVQGYTSVF*APSCESSALTTKNMNKFFLSHIPGLF 174
            + +L P+EL HSSFPS TFVQ ++ +F*AP  E SAL T +++KFFL  I  LF
Sbjct:  324 IYILFPEELPHSSFPSATFVQCHSPIF*APPREPSALPT*DVHKFFLCQILHLF 485

CC454_contig28907_v23.22177e-2864.79%
CC454_contig28907_v2
HSP 1 
Score: 121.576 bits (259), Expect = 3.22177e-28
Identity = 46/71 (64.79%), Postives = 55/71 (77.46%), Query Frame = -1
Query:  112 SHIWDCGKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTG 324
            SHIWDCGKQVYLGGFDT           AIKFRG++ADIN+ + DY +D+KQ  N+TKEEF+H+LRRQSTG
Sbjct:    3 SHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFRIEDYEEDLKQMNNLTKEEFVHVLRRQSTG 215

CC454_contig37568_v27.63968e-2768.12%
CC454_contig37568_v2
HSP 1 
Score: 116.994 bits (249), Expect = 7.63968e-27
Identity = 47/69 (68.12%), Postives = 56/69 (81.16%), Query Frame = -1
Query:   13 DADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK*EN 219
            + + N SV +     +Q +N+TKEEF+HILRRQSTGF+RGSSKYRGVTLHKCGRWEARMGQFL +K  N
Sbjct:  103 NGECNLSVDELFLIXRQMKNLTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLREKVRN 309

HSP 2 
Score: 89.5016 bits (189), Expect = 7.97124e-24
Identity = 37/53 (69.81%), Postives = 39/53 (73.58%), Query Frame = 2
Query:   14 FSYFFPRNCPIRASHRPHLCRVTPLYFELPRANPVL*RRRI*INSSLVIFLVC 172
            F  F  RNCPIRASHRPHLC VTP YFELP  NPVL RRR+  NSS V F +C
Sbjct:  104 FLTFSRRNCPIRASHRPHLCSVTPRYFELPLENPVLCRRRMCTNSSFVKFFIC 262

HSP 3 
Score: 36.3494 bits (73), Expect = 7.97124e-24
Identity = 21/37 (56.76%), Postives = 22/37 (59.46%), Query Frame = 3
Query:  171 VSYHPHNRLHYN*YQHQSPGT*LQLDHML*PQHEQCQ 281
            VS HPHN    +*YQ Q P T* QLDH L*    Q Q
Sbjct:  348 VSDHPHNH*D*S*YQLQLP*T**QLDHRL*IHGTQFQ 458

HSP 4 
Score: 65.6747 bits (137), Expect = 1.44869e-20
Identity = 24/47 (51.06%), Postives = 34/47 (72.34%), Query Frame = -3
Query:   32 TDQEYD*GRIYSYSSSSKHWIRTRELKIQRCNPAQMWSMGSSNGTIP 172
             D+E+D GRI ++ +S++HW+   ELKI   + AQMW MGSSNG +P
Sbjct:  122 ADEEFDKGRICAHPTSAEHWVLEGELKISGSDTAQMWPMGSSNGAVP 262

HSP 5 
Score: 49.1792 bits (101), Expect = 1.44869e-20
Identity = 17/25 (68.00%), Postives = 23/25 (92.00%), Query Frame = -1
Query:  163 IKFRGIDADINYSVSDYADDMKQTR 237
            IKFRG++ADIN+++SDY DD+KQ R
Sbjct:  340 IKFRGVEADINFNLSDYEDDLKQVR 414

HSP 6 
Score: 57.8852 bits (120), Expect = 2.02813e-15
Identity = 27/46 (58.70%), Postives = 31/46 (67.39%), Query Frame = -2
Query:   24 I*LRKNLFIFFVVKALDSHEGAQNTEV*PCTNVVDGKLEWDNSLGR 161
            I* RKNL   +V +AL S  GAQN   * CTNV DGKLEW +S G+
Sbjct:  114 I*QRKNLCTSYVGRALGSRGGAQNIGE*HCTNVADGKLEWGSSYGK 251

HSP 7 
Score: 39.5569 bits (80), Expect = 2.02813e-15
Identity = 22/38 (57.89%), Postives = 24/38 (63.16%), Query Frame = -2
Query:  168 LTLLMLRLEHMIELQLSSGGLMLISIIV*AIMRMI*NR 281
            L L  +  E MIEL  SSG L LIS  +  IMRMI*NR
Sbjct:  345 LKLCSMNSEPMIELLSSSGELKLISTSISVIMRMI*NR 458

CC454_contig43580_v27.12823e-2691.49%
CC454_contig43580_v2
HSP 1 
Score: 113.787 bits (242), Expect = 7.12823e-26
Identity = 43/47 (91.49%), Postives = 46/47 (97.87%), Query Frame = -1
Query:   22 NMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK 162
            N+TKEEF+H+LRRQSTGF RGSSKYRGVTLHKCGRWEARMGQFLGKK
Sbjct:  125 NLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKK 265

HSP 2 
Score: 83.0867 bits (175), Expect = 1.23092e-16
Identity = 34/47 (72.34%), Postives = 37/47 (78.72%), Query Frame = 2
Query:   17 SYFFPRNCPIRASHRPHLCRVTPLYFELPRANPVL*RRRI*INSSLV 157
            +YF P+N PIRASH PHLC+VTPLY ELP  NPVL RR  * NSSLV
Sbjct:  130 TYFLPKNWPIRASHLPHLCKVTPLYLELPLGNPVLCRRST*TNSSLV 270

CC454_contig17527_v22.73542e-1739.24%
CC454_contig17527_v2
HSP 1 
Score: 78.5046 bits (165), Expect = 2.73542e-17
Identity = 31/79 (39.24%), Postives = 49/79 (62.03%), Query Frame = -1
Query:   70 GKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLH 306
            G+QVYLG +D            A+K+ G    +N+ +  Y  ++++ + +TKEE++  LRR+S+GF+RG SKYRGV  H
Sbjct:   34 GRQVYLGAYDNEEAAAHTYDLAALKYWGPGTTLNFPIETYTKELEEMQKVTKEEYLASLRRRSSGFSRGVSKYRGVARH 270

HSP 2 
Score: 24.436 bits (47), Expect = 2.73542e-17
Identity = 8/11 (72.73%), Postives = 9/11 (81.82%), Query Frame = -1
Query:   40 HKCGRWEARMG 72
            H  GRWEAR+G
Sbjct:    1 HHNGRWEARIG 33

CC454_contig10110_v26.58757e-1743.04%
CC454_contig10110_v2
HSP 1 
Score: 84.0031 bits (177), Expect = 6.58757e-17
Identity = 34/79 (43.04%), Postives = 52/79 (65.82%), Query Frame = -1
Query:   70 GKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLH 306
            G+QVYLGG+D            A+K+ G     N+ V +Y  ++++ +NMT++EF+  LRR+S+GF+RG+S YRGVT H
Sbjct:  367 GRQVYLGGYDKEEKAARAYDLAALKYWGPTTTTNFPVCNYEKELEEMKNMTRQEFVASLRRKSSGFSRGASIYRGVTRH 603

CC454_contig27179_v26.55191e-1637.84%
CC454_contig27179_v2
HSP 1 
Score: 73.9225 bits (155), Expect = 6.55191e-16
Identity = 28/74 (37.84%), Postives = 49/74 (66.22%), Query Frame = -1
Query:   85 GKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYR 306
            G+QVYLGG+D            A+K+ G    IN+ + +Y  ++++ +NM+++E++  LRR+S+GF+RG+S YR
Sbjct:    2 GRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQSELEEMKNMSRQEYVAHLRRKSSGFSRGASMYR 223

HSP 2 
Score: 24.436 bits (47), Expect = 6.55191e-16
Identity = 6/10 (60.00%), Postives = 10/10 (100.00%), Query Frame = -1
Query:  310 TGRWESHIWD 339
            TGR+E+H+W+
Sbjct:  258 TGRYEAHLWE 287

CC454_contig26225_v28.96181e-1386.21%
CC454_contig26225_v2
HSP 1 
Score: 70.2568 bits (147), Expect = 8.96181e-13
Identity = 25/29 (86.21%), Postives = 26/29 (89.66%), Query Frame = 2
Query:   14 FSYFFPRNCPIRASHRPHLCRVTPLYFEL 100
            + YF PRNCPIRASHRPHLC VTPLYFEL
Sbjct:    1 YIYFLPRNCPIRASHRPHLCSVTPLYFEL 87

HSP 2 
Score: 68.8822 bits (144), Expect = 2.34728e-12
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = -1
Query:   22 SSKYRGVTLHKCGRWEARMGQFLGKK 99
            SSKYRGVTLHKCGRWEARMGQFLGKK
Sbjct:    2 SSKYRGVTLHKCGRWEARMGQFLGKK 79

Blast Hits to Contigs V2 CCall

Analysis Date: 11-18-2009 (Blast: RO454_contigs_v2_vs_CCall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
CCall_contig16567_v22.22606e-3187.72%
CCall_contig16567_v2
HSP 1 
Score: 132.115 bits (282), Expect = 2.22606e-31
Identity = 50/57 (87.72%), Postives = 55/57 (96.49%), Query Frame = -1
Query:   22 DYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK 192
            DY DD+KQ +N+TKEEF+HILRRQSTGF+RGSSKYRGVTLHKCGRWEARMGQFLGKK
Sbjct:  333 DYEDDLKQMKNLTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKK 503

HSP 2 
Score: 102.79 bits (218), Expect = 1.49743e-22
Identity = 40/54 (74.07%), Postives = 43/54 (79.63%), Query Frame = 2
Query:   14 FSYFFPRNCPIRASHRPHLCRVTPLYFELPRANPVL*RRRI*INSSLVIFLVCF 175
            + YFFPRNCPIRASHRPHLC VTP YFELP  NPVL RRR+  NSS V F +CF
Sbjct:  325 YIYFFPRNCPIRASHRPHLCSVTPRYFELPLENPVLCRRRMCTNSSFVKFFICF 486

HSP 3 
Score: 75.7553 bits (159), Expect = 2.05818e-14
Identity = 30/55 (54.55%), Postives = 41/55 (74.55%), Query Frame = -3
Query:   20 G*YETDQEYD*GRIYSYSSSSKHWIRTRELKIQRCNPAQMWSMGSSNGTIPWEEV 184
            G* ETD+E+D GRI ++ +S++HW+   ELKI   + AQMW MGSSNG +P E+V
Sbjct:  331 G*SETDEEFDKGRICAHPTSAEHWVLEGELKISGSDTAQMWPMGSSNGAVPREKV 495

HSP 4 
Score: 72.5479 bits (152), Expect = 1.90119e-13
Identity = 36/57 (63.16%), Postives = 40/57 (70.18%), Query Frame = -2
Query:   21 IMRMI*NRPGI*LRKNLFIFFVVKALDSHEGAQNTEV*PCTNVVDGKLEWDNSLGRS 191
            IMRMI*NR  I* RKNL   +V +AL S  GAQN   * CTNV DGKLEW +S G+S
Sbjct:  332 IMRMI*NR*RI*QRKNLCTSYVGRALGSRGGAQNIGE*HCTNVADGKLEWGSSSGKS 502

HSP 5 
Score: 67.5076 bits (141), Expect = 6.25611e-12
Identity = 30/54 (55.56%), Postives = 39/54 (72.22%), Query Frame = 1
Query:   13 VLLLLPKELSHSSFPSTTFVQGYTSVF*APSCESSALTTKNMNKFFLSHIPGLF 174
            + +L P+EL HSSFPS TFVQ ++ +F*AP  E SAL T +++KFFL  I  LF
Sbjct:  324 IYILFPEELPHSSFPSATFVQCHSPIF*APPREPSALPT*DVHKFFLCQILHLF 485

CCall_contig15942_v23.345e-2864.79%
CCall_contig15942_v2
HSP 1 
Score: 121.576 bits (259), Expect = 3.345e-28
Identity = 46/71 (64.79%), Postives = 55/71 (77.46%), Query Frame = -1
Query:  112 SHIWDCGKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTG 324
            SHIWDCGKQVYLGGFDT           AIKFRG++ADIN+ + DY +D+KQ  N+TKEEF+H+LRRQSTG
Sbjct:    3 SHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFRIEDYEEDLKQMNNLTKEEFVHVLRRQSTG 215

CCall_contig37164_v27.93189e-2768.12%
CCall_contig37164_v2
HSP 1 
Score: 116.994 bits (249), Expect = 7.93189e-27
Identity = 47/69 (68.12%), Postives = 56/69 (81.16%), Query Frame = -1
Query:   13 DADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK*EN 219
            + + N SV +     +Q +N+TKEEF+HILRRQSTGF+RGSSKYRGVTLHKCGRWEARMGQFL +K  N
Sbjct:  103 NGECNLSVDELFLIXRQMKNLTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLREKVRN 309

HSP 2 
Score: 89.5016 bits (189), Expect = 8.27613e-24
Identity = 37/53 (69.81%), Postives = 39/53 (73.58%), Query Frame = 2
Query:   14 FSYFFPRNCPIRASHRPHLCRVTPLYFELPRANPVL*RRRI*INSSLVIFLVC 172
            F  F  RNCPIRASHRPHLC VTP YFELP  NPVL RRR+  NSS V F +C
Sbjct:  104 FLTFSRRNCPIRASHRPHLCSVTPRYFELPLENPVLCRRRMCTNSSFVKFFIC 262

HSP 3 
Score: 36.3494 bits (73), Expect = 8.27613e-24
Identity = 21/37 (56.76%), Postives = 22/37 (59.46%), Query Frame = 3
Query:  171 VSYHPHNRLHYN*YQHQSPGT*LQLDHML*PQHEQCQ 281
            VS HPHN    +*YQ Q P T* QLDH L*    Q Q
Sbjct:  348 VSDHPHNH*D*S*YQLQLP*T**QLDHRL*IHGTQFQ 458

HSP 4 
Score: 65.6747 bits (137), Expect = 1.5041e-20
Identity = 24/46 (52.17%), Postives = 34/46 (73.91%), Query Frame = -3
Query:   32 DQEYD*GRIYSYSSSSKHWIRTRELKIQRCNPAQMWSMGSSNGTIP 169
            D+E+D GRI ++ +S++HW+   ELKI   + AQMW MGSSNG +P
Sbjct:  122 DEEFDKGRICAHPTSAEHWVLEGELKISGSDTAQMWPMGSSNGAVP 259

HSP 5 
Score: 49.1792 bits (101), Expect = 1.5041e-20
Identity = 17/25 (68.00%), Postives = 23/25 (92.00%), Query Frame = -1
Query:  163 IKFRGIDADINYSVSDYADDMKQTR 237
            IKFRG++ADIN+++SDY DD+KQ R
Sbjct:  340 IKFRGVEADINFNLSDYEDDLKQVR 414

HSP 6 
Score: 57.8852 bits (120), Expect = 2.1057e-15
Identity = 27/46 (58.70%), Postives = 31/46 (67.39%), Query Frame = -2
Query:   24 I*LRKNLFIFFVVKALDSHEGAQNTEV*PCTNVVDGKLEWDNSLGR 161
            I* RKNL   +V +AL S  GAQN   * CTNV DGKLEW +S G+
Sbjct:  114 I*QRKNLCTSYVGRALGSRGGAQNIGE*HCTNVADGKLEWGSSYGK 251

HSP 7 
Score: 39.5569 bits (80), Expect = 2.1057e-15
Identity = 22/38 (57.89%), Postives = 24/38 (63.16%), Query Frame = -2
Query:  168 LTLLMLRLEHMIELQLSSGGLMLISIIV*AIMRMI*NR 281
            L L  +  E MIEL  SSG L LIS  +  IMRMI*NR
Sbjct:  345 LKLCSMNSEPMIELLSSSGELKLISTSISVIMRMI*NR 458

CCall_contig42987_v27.40088e-2691.49%
CCall_contig42987_v2
HSP 1 
Score: 113.787 bits (242), Expect = 7.40088e-26
Identity = 43/47 (91.49%), Postives = 46/47 (97.87%), Query Frame = -1
Query:   22 NMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK 162
            N+TKEEF+H+LRRQSTGF RGSSKYRGVTLHKCGRWEARMGQFLGKK
Sbjct:  125 NLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKK 265

HSP 2 
Score: 83.0867 bits (175), Expect = 1.278e-16
Identity = 34/47 (72.34%), Postives = 37/47 (78.72%), Query Frame = 2
Query:   17 SYFFPRNCPIRASHRPHLCRVTPLYFELPRANPVL*RRRI*INSSLV 157
            +YF P+N PIRASH PHLC+VTPLY ELP  NPVL RR  * NSSLV
Sbjct:  130 TYFLPKNWPIRASHLPHLCKVTPLYLELPLGNPVLCRRST*TNSSLV 270

CCall_contig17400_v22.84005e-1739.24%
CCall_contig17400_v2
HSP 1 
Score: 78.5046 bits (165), Expect = 2.84005e-17
Identity = 31/79 (39.24%), Postives = 49/79 (62.03%), Query Frame = -1
Query:   70 GKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLH 306
            G+QVYLG +D            A+K+ G    +N+ +  Y  ++++ + +TKEE++  LRR+S+GF+RG SKYRGV  H
Sbjct:   34 GRQVYLGAYDNEEAAAHTYDLAALKYWGPGTTLNFPIETYTKELEEMQKVTKEEYLASLRRRSSGFSRGVSKYRGVARH 270

HSP 2 
Score: 24.436 bits (47), Expect = 2.84005e-17
Identity = 8/11 (72.73%), Postives = 9/11 (81.82%), Query Frame = -1
Query:   40 HKCGRWEARMG 72
            H  GRWEAR+G
Sbjct:    1 HHNGRWEARIG 33

CCall_contig10141_v26.83954e-1743.04%
CCall_contig10141_v2
HSP 1 
Score: 84.0031 bits (177), Expect = 6.83954e-17
Identity = 34/79 (43.04%), Postives = 52/79 (65.82%), Query Frame = -1
Query:   70 GKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLH 306
            G+QVYLGG+D            A+K+ G     N+ V +Y  ++++ +NMT++EF+  LRR+S+GF+RG+S YRGVT H
Sbjct:   34 GRQVYLGGYDKEEKAARAYDLAALKYWGPTTTTNFPVCNYEKELEEMKNMTRQEFVASLRRKSSGFSRGASIYRGVTRH 270

CCall_contig26756_v26.80251e-1637.84%
CCall_contig26756_v2
HSP 1 
Score: 73.9225 bits (155), Expect = 6.80251e-16
Identity = 28/74 (37.84%), Postives = 49/74 (66.22%), Query Frame = -1
Query:   85 GKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYR 306
            G+QVYLGG+D            A+K+ G    IN+ + +Y  ++++ +NM+++E++  LRR+S+GF+RG+S YR
Sbjct:    2 GRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQSELEEMKNMSRQEYVAHLRRKSSGFSRGASMYR 223

HSP 2 
Score: 24.436 bits (47), Expect = 6.80251e-16
Identity = 6/10 (60.00%), Postives = 10/10 (100.00%), Query Frame = -1
Query:  310 TGRWESHIWD 339
            TGR+E+H+W+
Sbjct:  258 TGRYEAHLWE 287

CCall_contig25855_v29.30459e-1386.21%
CCall_contig25855_v2
HSP 1 
Score: 70.2568 bits (147), Expect = 9.30459e-13
Identity = 25/29 (86.21%), Postives = 26/29 (89.66%), Query Frame = 2
Query:   14 FSYFFPRNCPIRASHRPHLCRVTPLYFEL 100
            + YF PRNCPIRASHRPHLC VTPLYFEL
Sbjct:    1 YIYFLPRNCPIRASHRPHLCSVTPLYFEL 87

HSP 2 
Score: 68.8822 bits (144), Expect = 2.43706e-12
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = -1
Query:   22 SSKYRGVTLHKCGRWEARMGQFLGKK 99
            SSKYRGVTLHKCGRWEARMGQFLGKK
Sbjct:    2 SSKYRGVTLHKCGRWEARMGQFLGKK 79

Blast Hits to MedicagoProt

Analysis Date: 11-18-2009 (Blast: RO454_contigs_v2_vs_MedicagoProt_20080227)
Best 10 Hits Shown | Show Best 25 Hits
Note: Click a description for more details.
Match Name E value Identity
IMGA|AC165216_1.4 Pathogene2.35745e-5180.53%
is-related transcriptional factor and ERF chr07_pseudomolecule_IMGAG_V2 25923675-25920635 H EGN_Mt071002 20080227
HSP 1 
Score: 196.823 bits (499), Expect = 2.35745e-51
Identity = 91/113 (80.53%), Postives = 98/113 (86.73%), Query Frame = -1
Query:   22 GVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK 360
            GVTFYRRTGRWESHIWDCGKQVYLGGFDT           AIKFRG+DADIN++VSDY +D+KQ  N TKEEF+HILRRQSTGF+RGSSKYRGVTLHKCGRWEARMGQFLGKK
Sbjct:  142 GVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNVSDYDEDIKQMNNFTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKK 254

IMGA|CR955007_2.4 Pathogene2.60647e-5076.99%
is-related transcriptional factor and ERF chr05_pseudomolecule_IMGAG_V2 5937325-5940825 E EGN_Mt071002 20080227
HSP 1 
Score: 193.356 bits (490), Expect = 2.60647e-50
Identity = 87/113 (76.99%), Postives = 97/113 (85.84%), Query Frame = -1
Query:   22 GVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK 360
            GVTFYRRTGRWESHIWDCGKQVYLGGFDT           AIKFRG++ADIN+++ DY +D+KQ  N+TKEEF+H+LRRQSTGF RGSSKYRGVTLHKCGRWEARMGQFLGKK
Sbjct:  155 GVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIEDYEEDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKK 267

IMGA|AC145164_12.4 Pathogene1.29358e-4976.99%
is-related transcriptional factor and ERF chr04_pseudomolecule_IMGAG_V2 14697735-14694034 E EGN_Mt071002 20080227
HSP 1 
Score: 191.045 bits (484), Expect = 1.29358e-49
Identity = 87/113 (76.99%), Postives = 98/113 (86.73%), Query Frame = -1
Query:   22 GVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK 360
            GVTFYRRTGRWESHIWDCGKQVYLGGFDT           AIKFRG+ ADIN++++DY DD+KQT+N++KEEF+ ILRRQS GF+RGSSKYRGVTLHKCGRWEARMGQFLGKK
Sbjct:  134 GVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVGADINFNLNDYDDDLKQTKNLSKEEFVQILRRQSNGFSRGSSKYRGVTLHKCGRWEARMGQFLGKK 246

IMGA|AC150784_29.4 Pathogene8.15901e-2873.61%
is-related transcriptional factor and ERF; GroEL-like chaperone, ATPase chr00_pseudomolecule_IMGAG_V2 11456759-11458440 E EGN_Mt071002 20080227
HSP 1 
Score: 118.627 bits (296), Expect = 8.15901e-28
Identity = 53/72 (73.61%), Postives = 64/72 (88.89%), Query Frame = -1
Query:   22 IKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK 237
            IKFRG+ ADIN++++DY DD+KQT+N++KEEF+  LR QS  F+RGSSKYRG TLHKCGRWEARMGQFLGKK
Sbjct:  137 IKFRGVGADINFNLNDYDDDLKQTKNLSKEEFVQTLRLQSNVFSRGSSKYRGGTLHKCGRWEARMGQFLGKK 208

IMGA|AY508219_21.5 Pathogene3.32021e-2142.98%
is-related transcriptional factor and ERF chr08_pseudomolecule_IMGAG_V2 11515415-11512404 H EGN_Mt071002 20080227
HSP 1 
Score: 96.6709 bits (239), Expect = 3.32021e-21
Identity = 52/121 (42.98%), Postives = 73/121 (60.33%), Query Frame = -1
Query:   22 GVTFYRRTGRWESHIWDCG-------KQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTL-HKCGRWEARMGQFLGKK 360
            GVT +R TGR+E+H+WD G       K+   G +DT           A+K+ G DA +N+ +  YA + ++    +KEE++  LRRQS+GF+RG SKYRGV   H  GRWEAR+G+  G K
Sbjct:   62 GVTRHRWTGRFEAHLWDKGSWNDIQKKKGKQGAYDTEEAAAHTYDLAALKYWGKDATLNFQIETYAKEYEEMEKSSKEEYLASLRRQSSGFSRGISKYRGVARHHHNGRWEARIGRVCGNK 182

IMGA|AY508219_14.5 Pathogene1.6478e-2042.74%
is-related transcriptional factor and ERF chr08_pseudomolecule_IMGAG_V2 11526973-11521471 H EGN_Mt071002 20080227
HSP 1 
Score: 94.3597 bits (233), Expect = 1.6478e-20
Identity = 53/124 (42.74%), Postives = 74/124 (59.68%), Query Frame = -1
Query:   22 GVTFYRRTGRWESHIWDC----------GKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTL-HKCGRWEARMGQFLGKK 360
            GVT +R TGR+E+H+WD           GKQ   G +DT           A+K+ G DA +N+ +  YA + ++    +KEE+++ LRRQS+GF+RG SKYRGV   H  GRWEAR+G+  G K
Sbjct:   61 GVTRHRWTGRFEAHLWDKTSWNKIQNKKGKQ---GAYDTEEAAARTYDLAALKYWGKDATLNFPIETYAKEFEEMDKASKEEYLNSLRRQSSGFSRGLSKYRGVARHHHNGRWEARIGRVRGNK 181

IMGA|AC174336_8.4 Pathogene2.1521e-2040.16%
is-related transcriptional factor and ERF chr08_pseudomolecule_IMGAG_V2 21262291-21266031 E EGN_Mt071002 20080227
HSP 1 
Score: 93.9745 bits (232), Expect = 2.1521e-20
Identity = 49/122 (40.16%), Postives = 77/122 (63.11%), Query Frame = -1
Query:   22 GVTFYRRTGRWESHIWD--CGKQVYL-----GGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTL--HKCGRWEARMGQFLGKK 360
            GVT +R TGR+E+H+WD  C K+        GG+D            A+K+ G    IN+ + +Y + +++ +NMT++E++  LRR+S+GF+RG+S YRGVT   H+ GRW+AR+G+  G K
Sbjct:  316 GVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQGGYDMEEKAARAYDQAALKYWGPSTHINFPLENYQNQLEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTSRHHQHGRWQARIGRVAGNK 437

IMGA|AC183304_22.4 Pathogene2.81073e-2041.32%
is-related transcriptional factor and ERF chr08_pseudomolecule_IMGAG_V2 6092565-6089142 H EGN_Mt071002 20080227
HSP 1 
Score: 93.5893 bits (231), Expect = 2.81073e-20
Identity = 50/121 (41.32%), Postives = 77/121 (63.64%), Query Frame = -1
Query:   22 GVTFYRRTGRWESHIWD--CGKQVYL-----GGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTL-HKCGRWEARMGQFLGKK 360
            GVT +R TGR+E+H+WD  C K+        GG+D            A+K+ G    IN+ +S Y  ++++ ++MT++EF+  LRR+S+GF+RG+S YRGVT  H+ GRW+AR+G+  G K
Sbjct:  254 GVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQGGYDKEEKAAKAYDLAALKYWGPTTHINFPLSTYDKELEEMKHMTRQEFVANLRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNK 374

IMGA|AC144930_5.4 Pathogene6.26164e-2039.67%
is-related transcriptional factor and ERF chr04_pseudomolecule_IMGAG_V2 17483745-17480660 E EGN_Mt071002 20080227
HSP 1 
Score: 92.4337 bits (228), Expect = 6.26164e-20
Identity = 48/121 (39.67%), Postives = 76/121 (62.81%), Query Frame = -1
Query:   22 GVTFYRRTGRWESHIWD--CGKQVYL-----GGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTL-HKCGRWEARMGQFLGKK 360
            GVT +R TGR+E+H+WD  C ++        GG+D            A+K+ G     N+ VS+Y  ++ + ++MT++EF+  +RR+S+GF+RG+S YRGVT  H+ GRW+AR+G+  G K
Sbjct:  169 GVTKHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAARSYDLAALKYWGTSTTTNFPVSNYEKEIDEMKHMTRQEFVASIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNK 289

IMGA|AC202509_5.3 Pathogene6.26164e-2039.67%
is-related transcriptional factor and ERF chr04_pseudomolecule_IMGAG_V2 17410024-17413111 E EGN_Mt071002 20080227
HSP 1 
Score: 92.4337 bits (228), Expect = 6.26164e-20
Identity = 48/121 (39.67%), Postives = 76/121 (62.81%), Query Frame = -1
Query:   22 GVTFYRRTGRWESHIWD--CGKQVYL-----GGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTL-HKCGRWEARMGQFLGKK 360
            GVT +R TGR+E+H+WD  C ++        GG+D            A+K+ G     N+ VS+Y  ++ + ++MT++EF+  +RR+S+GF+RG+S YRGVT  H+ GRW+AR+G+  G K
Sbjct:  169 GVTKHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAARSYDLAALKYWGTSTTTNFPVSNYEKEIDEMKHMTRQEFVASIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNK 289

Blast Hits to Contig V2 Oall

Analysis Date: 11-18-2009 (Blast: RO454_contigs_v2_vs_Oall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
Oall_contig11840_v28.65366e-95100.00%
Oall_contig11840_v2
HSP 1 
Score: 342.433 bits (741), Expect = 8.65366e-95
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 3
Query:    3 LRECSLTSSQGIVPFELPIDHICAGLHLCILSSLVRIQCFDDEEYE*ILP*SYSWSVSYHPHNRLHYN*YQHQSPGT*LQLDHML*PQHEQCQIHLNILAFHNPIYVIPIARFSGKTLRPGTESSGT*VPVYFSWLAVASA 425
            LRECSLTSSQGIVPFELPIDHICAGLHLCILSSLVRIQCFDDEEYE*ILP*SYSWSVSYHPHNRLHYN*YQHQSPGT*LQLDHML*PQHEQCQIHLNILAFHNPIYVIPIARFSGKTLRPGTESSGT*VPVYFSWLAVASA
Sbjct:    3 LRECSLTSSQGIVPFELPIDHICAGLHLCILSSLVRIQCFDDEEYE*ILP*SYSWSVSYHPHNRLHYN*YQHQSPGT*LQLDHML*PQHEQCQIHLNILAFHNPIYVIPIARFSGKTLRPGTESSGT*VPVYFSWLAVASA 425

HSP 2 
Score: 320.897 bits (694), Expect = 2.60496e-88
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = -2
Query:    3 SRSNSKPGKVDGDLGPGALSTGA*RFTGEPGDGNHIYGIVESKYI*VDLTLLMLRLEHMIELQLSSGGLMLISIIV*AIMRMI*NRPGI*LRKNLFIFFVVKALDSHEGAQNTEV*PCTNVVDGKLEWDNSLGRSKRTFP* 425
            SRSNSKPGKVDGDLGPGALSTGA*RFTGEPGDGNHIYGIVESKYI*VDLTLLMLRLEHMIELQLSSGGLMLISIIV*AIMRMI*NRPGI*LRKNLFIFFVVKALDSHEGAQNTEV*PCTNVVDGKLEWDNSLGRSKRTFP*
Sbjct:    3 SRSNSKPGKVDGDLGPGALSTGA*RFTGEPGDGNHIYGIVESKYI*VDLTLLMLRLEHMIELQLSSGGLMLISIIV*AIMRMI*NRPGI*LRKNLFIFFVVKALDSHEGAQNTEV*PCTNVVDGKLEWDNSLGRSKRTFP* 425

HSP 3 
Score: 194.431 bits (418), Expect = 1.25293e-79
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = -3
Query:    2 N*VPGD*C*YQL*CKRLCG*YETDQEYD*GRIYSYSSSSKHWIRTRELKIQRCNPAQMWSMGSSNGTIPWEEVREHSLK 238
            N*VPGD*C*YQL*CKRLCG*YETDQEYD*GRIYSYSSSSKHWIRTRELKIQRCNPAQMWSMGSSNGTIPWEEVREHSLK
Sbjct:    2 N*VPGD*C*YQL*CKRLCG*YETDQEYD*GRIYSYSSSSKHWIRTRELKIQRCNPAQMWSMGSSNGTIPWEEVREHSLK 238

HSP 4 
Score: 117.911 bits (251), Expect = 1.25293e-79
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = -3
Query:  275 AEATASQEK*TGT*VPELSVPGRNVLPENRAMGITYMGLWKASIFRWI*H 424
            AEATASQEK*TGT*VPELSVPGRNVLPENRAMGITYMGLWKASIFRWI*H
Sbjct:  275 AEATASQEK*TGT*VPELSVPGRNVLPENRAMGITYMGLWKASIFRWI*H 424

HSP 5 
Score: 153.193 bits (328), Expect = 4.92753e-73
Identity = 66/80 (82.50%), Postives = 66/80 (82.50%), Query Frame = 1
Query:    1 V*GNVLLLLPKELSHSSFPSTTFVQGYTSVF*APSCESSALTTKNMNKFFLSHIPGLFHXXXXXXXXXXXXXXNPPELNC 240
            V*GNVLLLLPKELSHSSFPSTTFVQGYTSVF*APSCESSALTTKNMNKFFLSHIPGLFH              NPPELNC
Sbjct:    1 V*GNVLLLLPKELSHSSFPSTTFVQGYTSVF*APSCESSALTTKNMNKFFLSHIPGLFHIIRIIAYTIIDISINPPELNC 240

HSP 6 
Score: 137.155 bits (293), Expect = 4.92753e-73
Identity = 55/67 (82.09%), Postives = 55/67 (82.09%), Query Frame = 2
Query:  224 PRNLIXXXXXXXXXXXXVSNPPKYTCFPQSHICDSHRPVLR*NVTPRY*ELRDLGPRLLFLACCCFC 424
            PRNLI            VSNPPKYTCFPQSHICDSHRPVLR*NVTPRY*ELRDLGPRLLFLACCCFC
Sbjct:  224 PRNLIAARSYALAAA*AVSNPPKYTCFPQSHICDSHRPVLR*NVTPRY*ELRDLGPRLLFLACCCFC 424

HSP 7 
Score: 265.912 bits (574), Expect = 9.28844e-72
Identity = 109/120 (90.83%), Postives = 109/120 (90.83%), Query Frame = -1
Query:    1 GVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK*ENIPLN 360
            GVTFYRRTGRWESHIWDCGKQVYLGGFDT           AIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK*ENIPLN
Sbjct:    1 GVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK*ENIPLN 360

HSP 8 
Score: 143.57 bits (307), Expect = 1.11538e-57
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 2
Query:    2 FKGMFSYFFPRNCPIRASHRPHLCRVTPLYFELPRANPVL*RRRI*INSSLVIFLVCF 175
            FKGMFSYFFPRNCPIRASHRPHLCRVTPLYFELPRANPVL*RRRI*INSSLVIFLVCF
Sbjct:    2 FKGMFSYFFPRNCPIRASHRPHLCRVTPLYFELPRANPVL*RRRI*INSSLVIFLVCF 175

HSP 9 
Score: 95.4583 bits (202), Expect = 1.11538e-57
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 1
Query:  295 YLLSTIPYM*FPSPGSPVKRYAPVLRAPGPRSPSTFPG 408
            YLLSTIPYM*FPSPGSPVKRYAPVLRAPGPRSPSTFPG
Sbjct:  295 YLLSTIPYM*FPSPGSPVKRYAPVLRAPGPRSPSTFPG 408

Oall_contig31042_v22.82663e-4974.00%
Oall_contig31042_v2
HSP 1 
Score: 191.224 bits (411), Expect = 2.82663e-49
Identity = 74/100 (74.00%), Postives = 85/100 (85.00%), Query Frame = -1
Query:   22 HIWDCGKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK 321
            HIWDCGKQVYLGGFDT           AIKFRG++ADIN+++SDY DD+KQ  + +K+EF+HILRRQSTGF+RGSSKYRGVTLHKCGRWEARMGQFLGKK
Sbjct:    2 HIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNISDYDDDIKQMSHFSKDEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKK 301

HSP 2 
Score: 92.709 bits (196), Expect = 5.60373e-31
Identity = 38/50 (76.00%), Postives = 40/50 (80.00%), Query Frame = 2
Query:   23 FFPRNCPIRASHRPHLCRVTPLYFELPRANPVL*RRRI*INSSLVIFLVC 172
            F PRNCPIRASHRPHLC VTPLYFELP   PVL RRRI  NSSL+  L+C
Sbjct:  151 FLPRNCPIRASHRPHLCSVTPLYFELPLEKPVLWRRRICTNSSLLK*LIC 300

HSP 3 
Score: 56.5106 bits (117), Expect = 5.60373e-31
Identity = 28/48 (58.33%), Postives = 30/48 (62.50%), Query Frame = 3
Query:  177 YHPHNRLHYN*YQHQSPGT*LQLDHML*PQHEQCQIHLNILAFHNPIY 320
            YH HN  + N*YQ     T* Q DH  * QHEQCQI  + LAFHNP Y
Sbjct:    3 YHHHNH*Y*N*YQLLLHET*SQPDHTP*QQHEQCQILPSKLAFHNPKY 146

HSP 4 
Score: 50.0956 bits (103), Expect = 1.51275e-14
Identity = 22/55 (40.00%), Postives = 37/55 (67.27%), Query Frame = 1
Query:   13 VLLLLPKELSHSSFPSTTFVQGYTSVF*APSCESSALTTKNMNKFFLSHIPGLFH 177
            V+ LL ++L H+SFPSTTFVQ ++ +  A   ++ AL  ++M+KF L+ +  L +
Sbjct:  146 VICLLAQKLPHTSFPSTTFVQCHSPILRASP*KTGALAPQDMHKFILAKMTHLLN 310

HSP 5 
Score: 43.6807 bits (89), Expect = 1.51275e-14
Identity = 19/33 (57.58%), Postives = 19/33 (57.58%), Query Frame = 2
Query:  224 PRNLIXXXXXXXXXXXXVSNPPKYTCFPQSHIC 322
            PRNLI            VSNPPK TCFPQS IC
Sbjct:    1 PRNLIAARSYALAAA*AVSNPPK*TCFPQSQIC 99

HSP 6 
Score: 70.2568 bits (147), Expect = 7.34481e-13
Identity = 47/103 (45.63%), Postives = 56/103 (54.37%), Query Frame = -2
Query:   12 IYGIVESKYI*VDLTLLMLRLEHMIELQLSSGGLMLISIIV*AIMRMI*NRPGI*LRKNLFIFFVVKALDSHEGAQNTEV*PCTNVVDGKLEWDNSLGRSKRT 320
            I+GIVESK+   DLTLLML L  MI L+ S     LI I +  IM MI +R  I  R NL I    +A      A++   * CTNVVDGKL W +   R   T
Sbjct:    3 IFGIVESKFTWEDLTLLMLLLGRMIGLRSSFVE*KLILISISVIMMMILSR*VILARMNLCISCGARAPVFQGEARSIGE*HCTNVVDGKLVWGSFWARRHMT 311

Oall_contig4952_v21.24221e-2244.30%
Oall_contig4952_v2
HSP 1 
Score: 87.6687 bits (185), Expect = 1.24221e-22
Identity = 35/79 (44.30%), Postives = 53/79 (67.09%), Query Frame = -1
Query:   70 GKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLH 306
            G+QVYLGG+D            A+K+ G    IN+ +S Y  ++++ +NMT++EF+  LRR+S+GF+RG+S YRGVT H
Sbjct:   37 GRQVYLGGYDKEEKAARAYDLAALKYWGPTTHINFPISTYEKELEEMKNMTRQEFVANLRRKSSGFSRGASMYRGVTRH 273

HSP 2 
Score: 33.6001 bits (67), Expect = 1.24221e-22
Identity = 11/17 (64.71%), Postives = 15/17 (88.24%), Query Frame = -1
Query:  310 GVTFYRRTGRWESHIWD 360
            GVT +R TGR+E+H+WD
Sbjct:  307 GVTRHRWTGRYEAHLWD 357

Oall_contig11705_v22.49831e-2143.04%
Oall_contig11705_v2
HSP 1 
Score: 84.0031 bits (177), Expect = 2.49831e-21
Identity = 34/79 (43.04%), Postives = 52/79 (65.82%), Query Frame = -1
Query:   70 GKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLH 306
            G+QVYLGG+D            A+K+ G     N+ V +Y  ++++ +NMT++EF+  LRR+S+GF+RG+S YRGVT H
Sbjct:   95 GRQVYLGGYDKEEKAARAYDLAALKYWGPTTTTNFPVCNYEKELEEMKNMTRQEFVASLRRKSSGFSRGASIYRGVTRH 331

HSP 2 
Score: 33.6001 bits (67), Expect = 2.49831e-21
Identity = 11/17 (64.71%), Postives = 15/17 (88.24%), Query Frame = -1
Query:  310 GVTFYRRTGRWESHIWD 360
            GVT +R TGR+E+H+WD
Sbjct:  365 GVTRHRWTGRYEAHLWD 415

Oall_contig28178_v21.67093e-2040.00%
Oall_contig28178_v2
HSP 1 
Score: 80.7956 bits (170), Expect = 1.67093e-20
Identity = 34/85 (40.00%), Postives = 54/85 (63.53%), Query Frame = -1
Query:   76 WESHIWDCGKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVT 330
            W  +    GKQVYLG +D            A+K+ G    IN+ V+DY  D+++ +N+++EE++  LRR+S+GF+RG SKYRG++
Sbjct:  203 WNQNQNKKGKQVYLGAYDEEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNVSREEYLASLRRKSSGFSRGISKYRGLS 457

HSP 2 
Score: 33.6001 bits (67), Expect = 1.67093e-20
Identity = 11/17 (64.71%), Postives = 15/17 (88.24%), Query Frame = -1
Query:  310 GVTFYRRTGRWESHIWD 360
            GVT +R TGR+E+H+WD
Sbjct:  143 GVTRHRWTGRYEAHLWD 193

Oall_contig11233_v22.25383e-1897.14%
Oall_contig11233_v2
HSP 1 
Score: 88.5852 bits (187), Expect = 2.25383e-18
Identity = 34/35 (97.14%), Postives = 35/35 (100.00%), Query Frame = -1
Query:   22 RQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK 126
            RQSTGF+RGSSKYRGVTLHKCGRWEARMGQFLGKK
Sbjct:    3 RQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKK 107

HSP 2 
Score: 82.1702 bits (173), Expect = 1.90407e-16
Identity = 31/38 (81.58%), Postives = 32/38 (84.21%), Query Frame = 2
Query:   14 FSYFFPRNCPIRASHRPHLCRVTPLYFELPRANPVL*R 127
            + YF PRNCPIRASHRPHLC VTPLYFELP  NPVL R
Sbjct:    2 YIYFLPRNCPIRASHRPHLCSVTPLYFELPLENPVLWR 115

Oall_contig7661_v25.78633e-1878.72%
Oall_contig7661_v2
HSP 1 
Score: 87.2105 bits (184), Expect = 5.78633e-18
Identity = 37/47 (78.72%), Postives = 38/47 (80.85%), Query Frame = 2
Query:  275 VSNPPKYTCFPQSHICDSHRPVLR*NVTPRY*ELRDLGPRLLFLACC 415
            VSNPPK TCFPQSH+ DS RPVLR*NVTPRY EL DLGPR LF   C
Sbjct:   11 VSNPPK*TCFPQSHM*DSQRPVLR*NVTPRYCELLDLGPRRLFFMGC 151

HSP 2 
Score: 81.712 bits (172), Expect = 2.64204e-16
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = -1
Query:  274 GVTFYRRTGRWESHIWDCGKQVYLGGFDT 360
            GVTFYRRTGRWESHIWDCGKQVYLGGFDT
Sbjct:   10 GVTFYRRTGRWESHIWDCGKQVYLGGFDT 96

Oall_contig11155_v21.01891e-1696.97%
Oall_contig11155_v2
HSP 1 
Score: 83.0867 bits (175), Expect = 1.01891e-16
Identity = 32/33 (96.97%), Postives = 32/33 (96.97%), Query Frame = -1
Query:   22 STGFARGSSKYRGVTLHKCGRWEARMGQFLGKK 120
            STGF RGSSKYRGVTLHKCGRWEARMGQFLGKK
Sbjct:  553 STGFPRGSSKYRGVTLHKCGRWEARMGQFLGKK 651

HSP 2 
Score: 71.1732 bits (149), Expect = 3.89145e-13
Identity = 26/35 (74.29%), Postives = 29/35 (82.86%), Query Frame = 2
Query:   17 SYFFPRNCPIRASHRPHLCRVTPLYFELPRANPVL 121
            +YF P+N PIRASH PHLC+VTPLY ELP  NPVL
Sbjct:  548 TYFLPKNWPIRASHLPHLCKVTPLYLELPLGNPVL 652

Blast Hits to Populus Trichocarpa Proteins

Analysis Date: 11-18-2009 (Blast: RO454_contigs_v2_vs_PopulusProt_JamboreeModels1_1)
Best 10 Hits Shown | Show Best 25 Hits | Show All Hits
Note: Click a description for more details.
Match Name E value Identity
gw1.28.415.12.07643e-5180.53%
jgi|Poptr1_1|281841|gw1.28.415.1
HSP 1 
Score: 197.593 bits (501), Expect = 2.07643e-51
Identity = 91/113 (80.53%), Postives = 99/113 (87.61%), Query Frame = -1
Query:   22 GVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK 360
            GVTFYRRTGRWESHIWDCGKQVYLGGFDT           AIKFRG+DADIN++V+DY +D+KQ RN TKEEF+HILRRQSTGF+RGSSKYRGVTLHKCGRWEARMGQFLGKK
Sbjct:   20 GVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARVYDRAAIKFRGVDADINFNVTDYDEDIKQMRNFTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKK 132

grail3.00190035026.67965e-5076.99%
jgi|Poptr1_1|655117|grail3.0019003502
HSP 1 
Score: 192.586 bits (488), Expect = 6.67965e-50
Identity = 87/113 (76.99%), Postives = 96/113 (84.96%), Query Frame = -1
Query:   22 GVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK 360
            GVTFYRRTGRWESHIWDCGKQVYLGGFDT           AIKFRG++ADIN+ + DY +D+KQ  N+TKEEF+H+LRRQSTGF RGSSKYRGVTLHKCGRWEARMGQFLGKK
Sbjct:  178 GVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFRIEDYEEDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKK 290

gw1.V.4061.16.67965e-5076.99%
jgi|Poptr1_1|208660|gw1.V.4061.1
HSP 1 
Score: 192.586 bits (488), Expect = 6.67965e-50
Identity = 87/113 (76.99%), Postives = 96/113 (84.96%), Query Frame = -1
Query:   22 GVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK 360
            GVTFYRRTGRWESHIWDCGKQVYLGGFDT           AIKFRG++ADIN+ + DY +D+KQ  N+TKEEF+H+LRRQSTGF RGSSKYRGVTLHKCGRWEARMGQFLGKK
Sbjct:  174 GVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFRIEDYEEDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKK 286

gw1.XVI.2655.18.72389e-5078.76%
jgi|Poptr1_1|256716|gw1.XVI.2655.1
HSP 1 
Score: 192.2 bits (487), Expect = 8.72389e-50
Identity = 89/113 (78.76%), Postives = 96/113 (84.96%), Query Frame = -1
Query:   22 GVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK 360
            GVTFYRRTGRWESHIWDCGKQVYLGGFDT           AIKFRG+DADIN++VSDY +D+KQ    TKEEF+H LRRQSTGF+RGSSKYRGVTLHKCGRWEARMGQFLGKK
Sbjct:   23 GVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNVSDYDEDIKQMSGFTKEEFVHTLRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKK 135

gw1.VIII.1637.11.03531e-3474.16%
jgi|Poptr1_1|420209|gw1.VIII.1637.1
HSP 1 
Score: 142.124 bits (357), Expect = 1.03531e-34
Identity = 66/89 (74.16%), Postives = 75/89 (84.27%), Query Frame = -1
Query:   22 GGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK 288
            GGFDT           AIKFRG+DADIN+++SDY +DMKQ +N+ KEEF+HILRRQSTGF+RGSSKYRGVTLHKCGRWEARMGQFLGKK
Sbjct:    1 GGFDTAHTAARAYDRAAIKFRGVDADINFNLSDYEEDMKQMKNLNKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKK 89

gw1.X.2501.11.76598e-3474.16%
jgi|Poptr1_1|227804|gw1.X.2501.1
HSP 1 
Score: 141.354 bits (355), Expect = 1.76598e-34
Identity = 66/89 (74.16%), Postives = 75/89 (84.27%), Query Frame = -1
Query:   22 GGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK 288
            GGFDT           AIKFRG+DADIN++ SDY +DMKQ +N++KEEF+HILRRQSTGF+RGSSKYRGVTLHKCGRWEARMGQFLGKK
Sbjct:    1 GGFDTAHAAARAYDRAAIKFRGVDADINFNSSDYEEDMKQMKNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKK 89

gw1.II.4141.14.22286e-2039.67%
jgi|Poptr1_1|412806|gw1.II.4141.1
HSP 1 
Score: 93.5893 bits (231), Expect = 4.22286e-20
Identity = 48/121 (39.67%), Postives = 78/121 (64.46%), Query Frame = -1
Query:   22 GVTFYRRTGRWESHIWD--CGKQVYL-----GGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTL-HKCGRWEARMGQFLGKK 360
            GVT +R TGR+E+H+WD  C K+        GG+D            A+K+ G    IN+ + +Y +++++ +NM+++E++  LRR+S+GF+RG+S YRGVT  H+ GRW+AR+G+  G K
Sbjct:  260 GVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQEELEEMKNMSRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNK 380

gw1.I.7266.14.22286e-2039.52%
jgi|Poptr1_1|178666|gw1.I.7266.1
HSP 1 
Score: 93.5893 bits (231), Expect = 4.22286e-20
Identity = 49/124 (39.52%), Postives = 76/124 (61.29%), Query Frame = -1
Query:   22 GVTFYRRTGRWESHIWD--C--------GKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTL-HKCGRWEARMGQFLGKK 360
            GVT +R TGR+E+H+WD  C        G+Q    G+D            A+K+ G     N+ +S+Y  +++  +NMT++EF+  +RR+S+GF+RG+S YRGVT  H+ GRW+AR+G+  G K
Sbjct:  169 GVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGTQCGYDKEDKAARAYDLAALKYWGTSTTTNFPISNYEKELEDMKNMTRQEFVASIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNK 292

gw1.III.2223.15.51522e-2040.50%
jgi|Poptr1_1|415120|gw1.III.2223.1
HSP 1 
Score: 93.2041 bits (230), Expect = 5.51522e-20
Identity = 49/121 (40.50%), Postives = 77/121 (63.64%), Query Frame = -1
Query:   22 GVTFYRRTGRWESHIWD--CGKQVYL-----GGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTL-HKCGRWEARMGQFLGKK 360
            GVT +R TGR+E+H+WD  C K+        GG+D            A+K+ G    IN+ ++ Y  ++++ ++MT++EF+  LRR+S+GF+RG+S YRGVT  H+ GRW+AR+G+  G K
Sbjct:    9 GVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQGGYDKEEKAARAYDLAALKYWGPTTHINFPLNTYEKELEEMKHMTRQEFVASLRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNK 129

fgenesh4_pg.C_LG_III0016217.20311e-2038.84%
jgi|Poptr1_1|758079|fgenesh4_pg.C_LG_III001621
HSP 1 
Score: 92.8189 bits (229), Expect = 7.20311e-20
Identity = 47/121 (38.84%), Postives = 77/121 (63.64%), Query Frame = -1
Query:   22 GVTFYRRTGRWESHIWD--CGKQVYL-----GGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTL-HKCGRWEARMGQFLGKK 360
            GVT +R TGR+E+H+WD  C ++        GG+D            A+K+ G     N+ +S+Y  ++++ ++MT++EF+  +RR+S+GF+RG+S YRGVT  H+ GRW+AR+G+  G K
Sbjct:  170 GVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKEIEEMKHMTRQEFVASIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNK 290

Blast Hits to TAIR7 Peptides

Analysis Date: 11-18-2009 (Blast: RO454_contigs_v2_vs_TAIR7_pep_20070425)
Best 10 Hits Shown | Show Best 25 Hits
Note: Click a description for more details.
Match Name E value Identity
AT2G28550.2 5.64e-5178.76%
TOE1 (TARGET OF EAT1 1); DNA binding / transcription factor | chr2:12233521-12235328 REVERSE
HSP 1 
Score: 196.052 bits (497), Expect = 5.64e-51
Identity = 89/113 (78.76%), Postives = 99/113 (87.61%), Query Frame = -1
Query:   22 GVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK 360
            GVTFYRRTGRWESHIWDCGKQVYLGGFDT           AIKFRG+DADIN+++ DY +DMKQ +N++KEEF+HILRRQSTGF+RGSSKYRGVTLHKCGRWEARMGQFLGKK
Sbjct:  156 GVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFTLGDYEEDMKQVQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKK 268

AT2G28550.1 5.64e-5178.76%
TOE1 (TARGET OF EAT1 1); DNA binding / transcription factor | chr2:12233245-12235328 REVERSE
HSP 1 
Score: 196.052 bits (497), Expect = 5.64e-51
Identity = 89/113 (78.76%), Postives = 99/113 (87.61%), Query Frame = -1
Query:   22 GVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK 360
            GVTFYRRTGRWESHIWDCGKQVYLGGFDT           AIKFRG+DADIN+++ DY +DMKQ +N++KEEF+HILRRQSTGF+RGSSKYRGVTLHKCGRWEARMGQFLGKK
Sbjct:  156 GVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFTLGDYEEDMKQVQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKK 268

AT4G36920.1 1.64099e-5077.88%
AP2 (APETALA 2); transcription factor | chr4:17400995-17403137 FORWARD
HSP 1 
Score: 194.512 bits (493), Expect = 1.64099e-50
Identity = 88/113 (77.88%), Postives = 97/113 (85.84%), Query Frame = -1
Query:   22 GVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK 360
            GVTFYRRTGRWESHIWDCGKQVYLGGFDT           AIKFRG++ADIN+++ DY DD+KQ  N+TKEEF+H+LRRQSTGF RGSSKYRGVTLHKCGRWEARMGQFLGKK
Sbjct:  134 GVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIDDYDDDLKQMTNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKK 246

AT5G67180.1 3.09477e-4976.11%
AP2 domain-containing transcription factor, putative | chr5:26819345-26821160 REVERSE
HSP 1 
Score: 190.274 bits (482), Expect = 3.09477e-49
Identity = 86/113 (76.11%), Postives = 95/113 (84.07%), Query Frame = -1
Query:   22 GVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLGKK 360
            GVTFYRRTGRWESHIWDCGKQVYLGGFDT           AIKFRG+DADIN+ + DY DD+KQ  N+TKEEF+H+LRRQSTGF RGSSKYRGVTLHKCGRWE+R+GQFL KK
Sbjct:   99 GVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFDIEDYLDDLKQMGNLTKEEFMHVLRRQSTGFPRGSSKYRGVTLHKCGRWESRLGQFLNKK 211

AT5G60120.1 6.05384e-3760.36%
TOE2 (TARGET OF EAT1 2); DNA binding / transcription factor | chr5:24225379-24228293 FORWARD
HSP 1 
Score: 149.443 bits (376), Expect = 6.05384e-37
Identity = 67/111 (60.36%), Postives = 84/111 (75.68%), Query Frame = -1
Query:   28 GVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQFLG 360
            GVTFYRRTGRWESHIWDCGKQVYLGGFDT           A+KFRG++ADIN+ + DY +D+KQ  N++KEE + +LRRQS+GF+R +S+Y+GV L K G W A+M Q  G
Sbjct:  163 GVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAVKFRGLEADINFVIGDYEEDLKQMANLSKEEVVQVLRRQSSGFSRNNSRYQGVALQKIGGWGAQMEQLHG 273

AT3G54990.2 1.39564e-3361.17%
SMZ (SCHLAFMUTZE) | chr3:20386013-20387499 REVERSE
HSP 1 
Score: 138.272 bits (347), Expect = 1.39564e-33
Identity = 63/103 (61.17%), Postives = 76/103 (73.79%), Query Frame = -1
Query:   52 GVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWE 360
            GVTFYRRTGRWESHIWDCGKQVYLGGFDT           AIKFRG+DADIN+ V DY  D+ + +N+ K EF+  LRR+S  F RGSSKY+G+ L KC +++
Sbjct:  125 GVTFYRRTGRWESHIWDCGKQVYLGGFDTAYAAARAYDRAAIKFRGLDADINFVVDDYRHDIDKMKNLNKVEFVQTLRRESASFGRGSSKYKGLALQKCTQFK 227

AT3G54990.1 1.39564e-3361.17%
SMZ (SCHLAFMUTZE); DNA binding / transcription factor | chr3:20384695-20387499 REVERSE
HSP 1 
Score: 138.272 bits (347), Expect = 1.39564e-33
Identity = 63/103 (61.17%), Postives = 76/103 (73.79%), Query Frame = -1
Query:   52 GVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLHKCGRWE 360
            GVTFYRRTGRWESHIWDCGKQVYLGGFDT           AIKFRG+DADIN+ V DY  D+ + +N+ K EF+  LRR+S  F RGSSKY+G+ L KC +++
Sbjct:  125 GVTFYRRTGRWESHIWDCGKQVYLGGFDTAYAAARAYDRAAIKFRGLDADINFVVDDYRHDIDKMKNLNKVEFVQTLRRESASFGRGSSKYKGLALQKCTQFK 227

AT2G39250.1 1.22264e-2961.96%
SNZ (SCHNARCHZAPFEN); DNA binding / transcription factor | chr2:16396088-16398009 REVERSE
HSP 1 
Score: 125.176 bits (313), Expect = 1.22264e-29
Identity = 57/92 (61.96%), Postives = 68/92 (73.91%), Query Frame = -1
Query:   85 GVTFYRRTGRWESHIWDCGKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYR 360
            GVTFYRRTGRWESHIWDCGKQVYLGGFDT           AI+FRG+ ADIN+ V DY  D+++ +N++KEEF+  LRR S   ARG SKY+
Sbjct:  111 GVTFYRRTGRWESHIWDCGKQVYLGGFDTAYTAARAYDRAAIRFRGLQADINFIVDDYKQDIEKMKNLSKEEFVQSLRRASASLARGGSKYK 202

AT5G65510.1 4.50004e-2445.97%
AIL7 (AINTEGUMENTA-LIKE 7); DNA binding / transcription factor | chr5:26203542-26206639 FORWARD
HSP 1 
Score: 106.686 bits (265), Expect = 4.50004e-24
Identity = 57/124 (45.97%), Postives = 81/124 (65.32%), Query Frame = -1
Query:   22 GVTFYRRTGRWESHIWD--C--------GKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTL-HKCGRWEARMGQFLGKK 360
            GVT +R TGR+E+H+WD  C        G+QVYLGG+D            A+K+ G  A  N+ VS Y+ ++++  +MTK+EFI  LRR+S+GF+RG+S YRGVT  H+ GRW+AR+G+  G K
Sbjct:  176 GVTRHRWTGRYEAHLWDNSCRREGQARKGRQVYLGGYDKEDRAARAYDLAALKYWGSTATTNFPVSSYSKELEEMNHMTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNK 299

AT5G57390.1 2.23335e-2342.74%
AIL5 (AINTEGUMENTA-LIKE 5); DNA binding / transcription factor | chr5:23270685-23273663 REVERSE
HSP 1 
Score: 104.375 bits (259), Expect = 2.23335e-23
Identity = 53/124 (42.74%), Postives = 81/124 (65.32%), Query Frame = -1
Query:   22 GVTFYRRTGRWESHIWD--C--------GKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTL-HKCGRWEARMGQFLGKK 360
            GVT +R TGR+E+H+WD  C        G+QVYLGG+D            A+K+ G     N+ +S+Y  ++++ ++MT++EF+  LRR+S+GF+RG+S YRGVT  H+ GRW+AR+G+  G K
Sbjct:  206 GVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEDKAARAYDLAALKYWGPTTTTNFPISNYESELEEMKHMTRQEFVASLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNK 329

Blast Hits to Contigs V2 WO454

Analysis Date: 11-18-2009 (Blast: RO454_contigs_v2_vs_WO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
WO454_contig2298_v25.76557e-2344.30%
WO454_contig2298_v2
HSP 1 
Score: 87.6687 bits (185), Expect = 5.76557e-23
Identity = 35/79 (44.30%), Postives = 53/79 (67.09%), Query Frame = -1
Query:   70 GKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVTLH 306
            G+QVYLGG+D            A+K+ G    IN+ +S Y  ++++ +NMT++EF+  LRR+S+GF+RG+S YRGVT H
Sbjct:   37 GRQVYLGGYDKEEKAARAYDLAALKYWGPTTHINFPISTYEKELEEMKNMTRQEFVANLRRKSSGFSRGASMYRGVTRH 273

HSP 2 
Score: 33.6001 bits (67), Expect = 5.76557e-23
Identity = 11/17 (64.71%), Postives = 15/17 (88.24%), Query Frame = -1
Query:  310 GVTFYRRTGRWESHIWD 360
            GVT +R TGR+E+H+WD
Sbjct:  307 GVTRHRWTGRYEAHLWD 357

WO454_contig15572_v27.75504e-2140.00%
WO454_contig15572_v2
HSP 1 
Score: 80.7956 bits (170), Expect = 7.75504e-21
Identity = 34/85 (40.00%), Postives = 54/85 (63.53%), Query Frame = -1
Query:   76 WESHIWDCGKQVYLGGFDTXXXXXXXXXXXAIKFRGIDADINYSVSDYADDMKQTRNMTKEEFIHILRRQSTGFARGSSKYRGVT 330
            W  +    GKQVYLG +D            A+K+ G    IN+ V+DY  D+++ +N+++EE++  LRR+S+GF+RG SKYRG++
Sbjct:  203 WNQNQNKKGKQVYLGAYDEEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNVSREEYLASLRRKSSGFSRGISKYRGLS 457

HSP 2 
Score: 33.6001 bits (67), Expect = 7.75504e-21
Identity = 11/17 (64.71%), Postives = 15/17 (88.24%), Query Frame = -1
Query:  310 GVTFYRRTGRWESHIWD 360
            GVT +R TGR+E+H+WD
Sbjct:  143 GVTRHRWTGRYEAHLWD 193

tags