CC454_contig26225_v2

NameCC454_contig26225_v2
AccessionID2725994
Sequence
AAGCTCGAAGTATAGGGGAGTGACACTACACAAATGCGGTCGATGGGAAG
CTCGTATGGGGCAGTTTCTGGGCAAGAAGTATATATATCTTGGACTATTC
GATAGTGAGATTGAGGCTGCAAGGGCATATGACAAGGCTGCCATCAAATG
CAATGGAAGAGAAGCAGTCACCAACTTTGAGCCTTGCTCATATGGAGGGG
AAATTTTTGCTGAGGCTGATAATGGAGAAG
Length230
Typecontig
Organism Chinese Chestnut

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References

Dababase Accession
GFF_source SeqManPro

ESTs in this contig

Type Feature Position
EST CCNHS_123898_2450_1791 0-230
EST CCNHS_286200_2752_1185 0-230

GO terms assigned to this feature

Accession Category Term
GO:0003677 molecular_function DNA binding
GO:0003700 molecular_function transcription factor activity

InterProScan Analysis

Analysis Date: 02-12-2010 (Interpro: CC454_contigs_v2)
SEQUENCE: CC454_contig26225_v2_2_ORF1 CRC64: 136924A530954E39 LENGTH: 76 aa
InterPro
IPR001471
Domain
Pathogenesis-related transcriptional factor/ERF, DNA-binding
G3DSA:3.30.730.10 [2-63]T 2e-12 G3DSA:3.30.730.10 no description no description
PF00847 [2-53]T 1.4e-14 PF00847 AP2 AP2
SM00380 [3-66]T 5.9e-30 SM00380 no description no description
PS51032 [3-60]T 15.514 PS51032 AP2_ERF AP2_ERF
InterPro
IPR016177
Domain
DNA-binding, integrase-type
SSF54171 [2-63]T 1.9e-18 SSF54171 DNA-binding domain DNA-binding domain
SEQUENCE: CC454_contig26225_v2_3_ORF2 CRC64: F315966BCCCC0046 LENGTH: 69 aa
No hits reported.
SEQUENCE: CC454_contig26225_v2_4_ORF1 CRC64: 281E20451DE9349D LENGTH: 76 aa
noIPR
unintegrated
unintegrated
seg [26-45]? NA seg seg seg
SEQUENCE: CC454_contig26225_v2_2_ORF1 CRC64: 136924A530954E39 LENGTH: 76 aa
InterPro
IPR001471
Domain
Pathogenesis-related transcriptional factor/ERF, DNA-binding
GENE3DG3DSA:3.30.730.10no description
 2e-12 [2-63]T       
PFAMPF00847AP2
 1.4e-14 [2-53]T       
SMARTSM00380no description
 5.9e-30 [3-66]T       
PROFILEPS51032AP2_ERF
 15.514 [3-60]T       
Parent IPR016177
Children no children
Found in IPR017392
Contains no entries
GO terms Molecular Function: transcription factor activity (GO:0003700)
InterPro
IPR016177
Domain
DNA-binding, integrase-type
SUPERFAMILYSSF54171DNA-binding domain
 1.9e-18 [2-63]T       
Parent no parent
Children IPR001471 IPR001739 IPR004191 IPR015094
Found in no entries
Contains no entries
GO terms Molecular Function: DNA binding (GO:0003677)
SEQUENCE: CC454_contig26225_v2_3_ORF2 CRC64: F315966BCCCC0046 LENGTH: 69 aa
No hits reported.
SEQUENCE: CC454_contig26225_v2_4_ORF1 CRC64: 281E20451DE9349D LENGTH: 76 aa
noIPR
unintegrated
unintegrated
SEGseg seg
 NA [26-45]?       
Parent no parent
Children no children
Found in no entries
Contains no entries
GO terms none

Blast Hits to Contigs V2 AB454

Analysis Date: 11-17-2009 (Blast: CC454_contigs_v2_vs_AB454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
AB454_contig6584_v22.2341e-1456.86%
AB454_contig6584_v2
HSP 1 
Score: 71.1732 bits (149), Expect = 2.2341e-14
Identity = 29/51 (56.86%), Postives = 37/51 (72.55%), Query Frame = 2
Query:   29 HKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFE 181
            H+ GRW+AR+G+  G K +YLG F ++ EAA AYD AAIK  G  AVTNF+
Sbjct:  222 HQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFD 374

Blast Hits to Contigs V2 ABall

Analysis Date: 11-17-2009 (Blast: CC454_contigs_v2_vs_ABall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
ABall_contig6681_v22.27614e-1456.86%
ABall_contig6681_v2
HSP 1 
Score: 71.1732 bits (149), Expect = 2.27614e-14
Identity = 29/51 (56.86%), Postives = 37/51 (72.55%), Query Frame = 2
Query:   29 HKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFE 181
            H+ GRW+AR+G+  G K +YLG F ++ EAA AYD AAIK  G  AVTNF+
Sbjct:  222 HQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFD 374

Blast Hits to Contigs V2 AC454

Analysis Date: 11-17-2009 (Blast: CC454_contigs_v2_vs_AC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
AC454_contig10356_v28.31975e-2080.00%
AC454_contig10356_v2
HSP 1 
Score: 91.3344 bits (193), Expect = 8.31975e-20
Identity = 36/45 (80.00%), Postives = 41/45 (91.11%), Query Frame = 2
Query:   89 LGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSYGGEIFAEADN 223
            LGLFDSE+EAARAYDKAAIKCNGREAVTNFEP +Y GE+ ++A N
Sbjct:  296 LGLFDSEVEAARAYDKAAIKCNGREAVTNFEPSTYEGEMISDASN 430

AC454_contig722_v26.05867e-1248.28%
AC454_contig722_v2
HSP 1 
Score: 65.2165 bits (136), Expect = 6.05867e-12
Identity = 28/58 (48.28%), Postives = 36/58 (62.07%), Query Frame = 2
Query:    5 SKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNF 178
            +K+RGV     GRW A +     +K ++LG FD+  EAA  YDKAA+K  G  AVTNF
Sbjct:  826 TKFRGVRQRPWGRWAAEIRDPTRRKRVWLGTFDTAEEAASEYDKAAVKLKGPNAVTNF 999

Blast Hits to Contigs V2 CCall

Analysis Date: 11-17-2009 (Blast: CC454_contigs_v2_vs_CCall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
CCall_contig25855_v25.70958e-51100.00%
CCall_contig25855_v2
HSP 1 
Score: 195.806 bits (421), Expect = 5.70958e-51
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = -1
Query:    3 LLHYQPQQKFPLHMSKAQSW*LLLFHCI*WQPCHMPLQPQSHYRIVQDIYTSCPETAPYELPIDRICVVSLPYTSS 230
            LLHYQPQQKFPLHMSKAQSW*LLLFHCI*WQPCHMPLQPQSHYRIVQDIYTSCPETAPYELPIDRICVVSLPYTSS
Sbjct:    3 LLHYQPQQKFPLHMSKAQSW*LLLFHCI*WQPCHMPLQPQSHYRIVQDIYTSCPETAPYELPIDRICVVSLPYTSS 230

HSP 2 
Score: 190.307 bits (409), Expect = 2.58118e-49
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 2
Query:    2 SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSYGGEIFAEADNGE 229
            SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSYGGEIFAEADNGE
Sbjct:    2 SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSYGGEIFAEADNGE 229

HSP 3 
Score: 180.685 bits (388), Expect = 2.03443e-46
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3
Query:    3 ARSIGE*HYTNAVDGKLVWGSFWARSIYILDYSIVRLRLQGHMTRLPSNAMEEKQSPTLSLAHMEGKFLLRLIMEK 230
            ARSIGE*HYTNAVDGKLVWGSFWARSIYILDYSIVRLRLQGHMTRLPSNAMEEKQSPTLSLAHMEGKFLLRLIMEK
Sbjct:    3 ARSIGE*HYTNAVDGKLVWGSFWARSIYILDYSIVRLRLQGHMTRLPSNAMEEKQSPTLSLAHMEGKFLLRLIMEK 230

HSP 4 
Score: 177.936 bits (382), Expect = 1.36789e-45
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1
Query:    1 KLEV*GSDTTQMRSMGSSYGAVSGQEVYISWTIR**D*GCKGI*QGCHQMQWKRSSHQL*ALLIWRGNFC*G**WR 228
            KLEV*GSDTTQMRSMGSSYGAVSGQEVYISWTIR**D*GCKGI*QGCHQMQWKRSSHQL*ALLIWRGNFC*G**WR
Sbjct:    1 KLEV*GSDTTQMRSMGSSYGAVSGQEVYISWTIR**D*GCKGI*QGCHQMQWKRSSHQL*ALLIWRGNFC*G**WR 228

HSP 5 
Score: 175.187 bits (376), Expect = 9.19724e-45
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = -2
Query:    2 FSIISLSKNFPSI*ARLKVGDCFSSIAFDGSLVICPCSLNLTIE*SKIYILLAQKLPHTSFPSTAFV*CHSPILRA 229
            FSIISLSKNFPSI*ARLKVGDCFSSIAFDGSLVICPCSLNLTIE*SKIYILLAQKLPHTSFPSTAFV*CHSPILRA
Sbjct:    2 FSIISLSKNFPSI*ARLKVGDCFSSIAFDGSLVICPCSLNLTIE*SKIYILLAQKLPHTSFPSTAFV*CHSPILRA 229

HSP 6 
Score: 84.4613 bits (178), Expect = 3.68933e-30
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = -3
Query:    1 PRYIYFLPRNCPIRASHRPHLCSVTPLYFEL 93
            PRYIYFLPRNCPIRASHRPHLCSVTPLYFEL
Sbjct:    1 PRYIYFLPRNCPIRASHRPHLCSVTPLYFEL 93

HSP 7 
Score: 58.8016 bits (122), Expect = 3.68933e-30
Identity = 25/25 (100.00%), Postives = 25/25 (100.00%), Query Frame = -3
Query:  154 SPLSASAKISPPYEQGSKLVTASLP 228
            SPLSASAKISPPYEQGSKLVTASLP
Sbjct:  154 SPLSASAKISPPYEQGSKLVTASLP 228

CCall_contig16567_v27.24907e-4287.84%
CCall_contig16567_v2
HSP 1 
Score: 165.564 bits (355), Expect = 7.24907e-42
Identity = 65/74 (87.84%), Postives = 70/74 (94.59%), Query Frame = 2
Query:    2 SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSYGGEIFAEADN 223
            SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSE+EAARAYDKAAIKCNGREAVTNFEP +Y GE+ ++A N
Sbjct:  189 SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAIKCNGREAVTNFEPSTYEGEMISDASN 410

HSP 2 
Score: 79.8792 bits (168), Expect = 3.27651e-21
Identity = 29/31 (93.55%), Postives = 29/31 (93.55%), Query Frame = -3
Query:    1 PRYIYFLPRNCPIRASHRPHLCSVTPLYFEL 93
            PRYIYF PRNCPIRASHRPHLCSVTP YFEL
Sbjct:  319 PRYIYFFPRNCPIRASHRPHLCSVTPRYFEL 411

HSP 3 
Score: 34.5166 bits (69), Expect = 3.27651e-21
Identity = 17/23 (73.91%), Postives = 17/23 (73.91%), Query Frame = -3
Query:  154 LSASAKISPPYEQGSKLVTASLP 222
            L AS  ISP Y  GSKLVTASLP
Sbjct:  190 LLASDIISPSYVLGSKLVTASLP 258

HSP 4 
Score: 90.418 bits (191), Expect = 3.0307e-19
Identity = 41/75 (54.67%), Postives = 52/75 (69.33%), Query Frame = 3
Query:    3 ARSIGE*HYTNAVDGKLVWGSFWARSIYILDYSIVRLRLQGHMTRLPSNAMEEKQSPTLSLAHMEGKFLLRLIME 227
            A++IGE*H TN  DGKL WGS   +SIYIL  S  + +LQG MTR  SN MEE++SPTLS   M+G+  L  +M+
Sbjct:  185 AQNIGE*HCTNVADGKLEWGSSSGKSIYILGCSTAK*KLQGLMTRQXSNVMEERRSPTLSQVRMKGR*YLMPVMK 409

HSP 5 
Score: 89.9598 bits (190), Expect = 4.16368e-19
Identity = 42/71 (59.15%), Postives = 43/71 (60.56%), Query Frame = -1
Query:   15 LHYQPQQKFPLHMSKAQSW*LLLFHCI*WQPCHMPLQPQSHYRIVQDIYTSCPETAPYELPIDRICVVSLP 227
            LHY  Q   PLH   AQSW*  LFH I*  PCH PLQ     R  QDIYT    TAP+ELPI  IC VSLP
Sbjct:  185 LHYWHQISSPLHTYLAQSW*PPLFHYI*XLPCHKPLQLLLRCRTAQDIYTFSRGTAPFELPIGHICAVSLP 397

HSP 6 
Score: 88.127 bits (186), Expect = 1.48325e-18
Identity = 39/71 (54.93%), Postives = 45/71 (63.38%), Query Frame = -2
Query:   11 IISLSKNFPSI*ARLKVGDCFSSIAFDGSLVICPCSLNLTIE*SKIYILLAQKLPHTSFPSTAFV*CHSPI 223
            I  +  + P I   LKVGD  SSI FD  LVI PCS    +E  KIYIL  ++LPH+SFPS  FV CHSPI
Sbjct:  189 ITGIRYHLPFIRTWLKVGDRLSSITFDXCLVISPCSFYFAVEQPKIYILFPEELPHSSFPSATFVQCHSPI 401

HSP 7 
Score: 84.4613 bits (178), Expect = 1.88231e-17
Identity = 38/68 (55.88%), Postives = 47/68 (69.12%), Query Frame = 1
Query:    1 KLEV*GSDTTQMRSMGSSYGAVSGQEVYISWTIR**D*GCKGI*QGCHQMQWKRSSHQL*ALLIWRGN 204
            +L++ GSDT QM  MGSS GAV  ++VYISW +R     CKG+*QG  QM WKR  HQL*A  + RG+
Sbjct:  208 ELKISGSDTAQMWPMGSSNGAVPREKVYISWAVRQRSRSCKGL*QGSXQM*WKRGGHQL*AKYV*RGD 411

CCall_contig42987_v29.96134e-3886.76%
CCall_contig42987_v2
HSP 1 
Score: 151.818 bits (325), Expect = 9.96134e-38
Identity = 59/68 (86.76%), Postives = 64/68 (94.12%), Query Frame = 2
Query:    2 SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSYGGEI 205
            SSKYRGVTLHKCGRWEARMGQFLGKKY+YLGLFD+EIEAARAYDKAAIKCNG+EAVTNF+P  Y  E+
Sbjct:  188 SSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYENEL 391

HSP 2 
Score: 61.5509 bits (128), Expect = 2.97581e-12
Identity = 23/31 (74.19%), Postives = 25/31 (80.65%), Query Frame = -3
Query:    1 PRYIYFLPRNCPIRASHRPHLCSVTPLYFEL 93
            P+  YFLP+N PIRASH PHLC VTPLY EL
Sbjct:  187 PK*TYFLPKNWPIRASHLPHLCKVTPLYLEL 279

HSP 3 
Score: 24.436 bits (47), Expect = 2.97581e-12
Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = -3
Query:  154 GSKLVTASLP 183
            GSKLVTASLP
Sbjct:  340 GSKLVTASLP 369

HSP 4 
Score: 66.1329 bits (138), Expect = 6.19544e-12
Identity = 29/62 (46.77%), Postives = 42/62 (67.74%), Query Frame = -2
Query:    2 ARLKVGDCFSSIAFDGSLVICPCSLNLTIE*SKIYILLAQKLPHTSFPSTAFV*CHSPILRA 187
            A +KVGD F +IA + S +I PC  NL+I+ ++I +L AQKL H S PS+  V  ++ +LRA
Sbjct:  188 AWIKVGDSFFAIALNCSFIISPCGFNLSIKQTQINVLFAQKLAHPSLPSSTLVQGYTSVLRA 373

CCall_contig23612_v26.88559e-1976.47%
CCall_contig23612_v2
HSP 1 
Score: 67.9658 bits (142), Expect = 6.88559e-19
Identity = 26/34 (76.47%), Postives = 30/34 (88.24%), Query Frame = 2
Query:  122 RAYDKAAIKCNGREAVTNFEPCSYGGEIFAEADN 223
            RAYDKAAIKCNGREAVTNFEP +Y GE+ ++A N
Sbjct:    9 RAYDKAAIKCNGREAVTNFEPSTYEGEMISDASN 110

HSP 2 
Score: 38.1822 bits (77), Expect = 6.88559e-19
Identity = 14/17 (82.35%), Postives = 17/17 (100.00%), Query Frame = 2
Query:   77 KYIYLGLFDSEIEAARA 127
            +YIYLGLFDSE+EAAR+
Sbjct:  218 RYIYLGLFDSEVEAARS 268

CCall_contig10141_v23.84698e-1448.44%
CCall_contig10141_v2
HSP 1 
Score: 73.4643 bits (154), Expect = 3.84698e-14
Identity = 31/64 (48.44%), Postives = 42/64 (65.62%), Query Frame = 2
Query:   29 HKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSYGGEIFAEAD 220
            H+ GRW+AR+G+  G K +YLG F ++ EAA AYD AAIK  G  AVTNF+   Y  +  A ++
Sbjct:  271 HQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSIANSN 462

CCall_contig37164_v24.16561e-1192.31%
CCall_contig37164_v2
HSP 1 
Score: 63.3837 bits (132), Expect = 4.16561e-11
Identity = 24/26 (92.31%), Postives = 25/26 (96.15%), Query Frame = 2
Query:    2 SSKYRGVTLHKCGRWEARMGQFLGKK 79
            SSKYRGVTLHKCGRWEARMGQFL +K
Sbjct:  112 SSKYRGVTLHKCGRWEARMGQFLREK 189

HSP 2 
Score: 62.4673 bits (130), Expect = 7.86227e-11
Identity = 23/29 (79.31%), Postives = 25/29 (86.21%), Query Frame = -3
Query:    1 YIYFLPRNCPIRASHRPHLCSVTPLYFEL 87
            ++ F  RNCPIRASHRPHLCSVTP YFEL
Sbjct:  104 FLTFSRRNCPIRASHRPHLCSVTPRYFEL 190

Blast Hits to MedicagoProt

Analysis Date: 11-17-2009 (Blast: CC454_contigs_v2_vs_MedicagoProt_20080227)
Best 10 Hits Shown | Show Best 25 Hits
Note: Click a description for more details.
Match Name E value Identity
IMGA|AC165216_1.4 Pathogene1.76016e-3485.53%
is-related transcriptional factor and ERF chr07_pseudomolecule_IMGAG_V2 25923675-25920635 H EGN_Mt071002 20080227
HSP 1 
Score: 140.198 bits (352), Expect = 1.76016e-34
Identity = 65/76 (85.53%), Postives = 71/76 (93.42%), Query Frame = 2
Query:    2 SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSYGGEIFAEADNGE 229
            SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSE++AARAYDKAAIKCNGREAVTNFE  SY GE+ ++ADN +
Sbjct:  229 SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSELDAARAYDKAAIKCNGREAVTNFEASSYEGELTSQADNDD 304

IMGA|CR955007_2.4 Pathogene6.26033e-3283.33%
is-related transcriptional factor and ERF chr05_pseudomolecule_IMGAG_V2 5937325-5940825 E EGN_Mt071002 20080227
HSP 1 
Score: 131.724 bits (330), Expect = 6.26033e-32
Identity = 60/72 (83.33%), Postives = 67/72 (93.06%), Query Frame = 2
Query:    2 SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSYGGEIFAEA 217
            SSKYRGVTLHKCGRWEARMGQFLGKKY+YLGLFD+EIEAARAYDKAAIKCNG+EAVTNF+P  Y  E+ +E+
Sbjct:  242 SSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYDNELNSES 313

IMGA|AC145164_12.4 Pathogene1.18065e-3082.43%
is-related transcriptional factor and ERF chr04_pseudomolecule_IMGAG_V2 14697735-14694034 E EGN_Mt071002 20080227
HSP 1 
Score: 127.487 bits (319), Expect = 1.18065e-30
Identity = 61/74 (82.43%), Postives = 67/74 (90.54%), Query Frame = 2
Query:    2 SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSYGGEIFAEADN 223
            SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSE+EAARAYDKAAI+ NGREA+TNFE  +Y GE+ + A N
Sbjct:  221 SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAIQNNGREAMTNFEASTYEGEMKSAAIN 294

IMGA|AC171804_29.4 Pathogene1.49352e-2560.22%
is-related transcriptional factor and ERF chr07_pseudomolecule_IMGAG_V2 10982970-10985150 H EGN_Mt071002 20080227
HSP 1 
Score: 110.538 bits (275), Expect = 1.49352e-25
Identity = 56/93 (60.22%), Postives = 63/93 (67.74%), Query Frame = 2
Query:    2 SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAY---------------------DKAAIKCNGREAVTNFEPCSYGGEIFAEA 217
            SSKYRGVTLHKCGRWEARMGQFLGKKY+YLGLFD+EIEAA  Y                     DKA IKCNG+EA TNF+P  Y  E+ +E+
Sbjct:   23 SSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAASYYCQFNLLFSAFSLKIVAKINRDDKATIKCNGKEADTNFDPSIYDNELNSES 115

IMGA|AC169182_41.5 Pathogene3.01633e-1892.86%
is-related transcriptional factor and ERF; GroEL-like chaperone, ATPase chr07_pseudomolecule_IMGAG_V2 12394738-12397442 E EGN_Mt071002 20080227
HSP 1 
Score: 86.2705 bits (212), Expect = 3.01633e-18
Identity = 39/42 (92.86%), Postives = 41/42 (97.62%), Query Frame = 2
Query:    2 SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARA 127
            SSKYRG TLHKCGRWEARMGQFLGKKYIYLGLFDSE+EAAR+
Sbjct:  130 SSKYRGGTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARS 171

IMGA|AC150784_29.4 Pathogene3.01633e-1892.86%
is-related transcriptional factor and ERF; GroEL-like chaperone, ATPase chr00_pseudomolecule_IMGAG_V2 11456759-11458440 E EGN_Mt071002 20080227
HSP 1 
Score: 86.2705 bits (212), Expect = 3.01633e-18
Identity = 39/42 (92.86%), Postives = 41/42 (97.62%), Query Frame = 2
Query:    2 SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARA 127
            SSKYRG TLHKCGRWEARMGQFLGKKYIYLGLFDSE+EAAR+
Sbjct:  183 SSKYRGGTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARS 224

IMGA|AC137994_34.4 Pathogene3.12141e-1560.94%
is-related transcriptional factor and ERF chr07_pseudomolecule_IMGAG_V2 1183675-1185836 H EGN_Mt071002 20080227
HSP 1 
Score: 76.2554 bits (186), Expect = 3.12141e-15
Identity = 39/64 (60.94%), Postives = 46/64 (71.88%), Query Frame = 2
Query:    5 SKYRGVTLHKC-GRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSY 193
            SKYRGV  H   GRWEAR+G+  G KY+YLG + ++ EAARAYD AAI+  G  AVTNFE  SY
Sbjct:  166 SKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGIHAVTNFELSSY 229

IMGA|AY508219_21.5 Pathogene4.50731e-1456.25%
is-related transcriptional factor and ERF chr08_pseudomolecule_IMGAG_V2 11515415-11512404 H EGN_Mt071002 20080227
HSP 1 
Score: 72.4034 bits (176), Expect = 4.50731e-14
Identity = 36/64 (56.25%), Postives = 45/64 (70.31%), Query Frame = 2
Query:    5 SKYRGVTLHKC-GRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSY 193
            SKYRGV  H   GRWEAR+G+  G KY+YLG + ++ EAA AYD AAI+  G  AVTNF+  +Y
Sbjct:  157 SKYRGVARHHHNGRWEARIGRVCGNKYLYLGTYKTQEEAAMAYDMAAIEYRGTNAVTNFDISNY 220

IMGA|AY508219_14.5 Pathogene4.50731e-1451.35%
is-related transcriptional factor and ERF chr08_pseudomolecule_IMGAG_V2 11526973-11521471 H EGN_Mt071002 20080227
HSP 1 
Score: 72.4034 bits (176), Expect = 4.50731e-14
Identity = 38/74 (51.35%), Postives = 50/74 (67.57%), Query Frame = 2
Query:    5 SKYRGVTLHKC-GRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSYGGEIFAEADN 223
            SKYRGV  H   GRWEAR+G+  G KY+YLG + ++ EAA AYD AAIK  G  AVTNF+  +Y  ++  E ++
Sbjct:  156 SKYRGVARHHHNGRWEARIGRVRGNKYLYLGTYKTQEEAAVAYDMAAIKHRGINAVTNFDISNYMDKLKVEKND 229

IMGA|AC144930_5.4 Pathogene5.88673e-1451.35%
is-related transcriptional factor and ERF chr04_pseudomolecule_IMGAG_V2 17483745-17480660 E EGN_Mt071002 20080227
HSP 1 
Score: 72.0182 bits (175), Expect = 5.88673e-14
Identity = 38/74 (51.35%), Postives = 49/74 (66.22%), Query Frame = 2
Query:    2 SSKYRGVTLH-KCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSYGGEIFAEAD 220
            +S YRGVT H + GRW+AR+G+  G K +YLG F +E EAA AYD AAIK  G  AVTNF+   Y  +   E++
Sbjct:  263 ASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMTRYDVKAILESN 336

Blast Hits to Contig V2 Oall

Analysis Date: 11-17-2009 (Blast: CC454_contigs_v2_vs_Oall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
Oall_contig11233_v27.14131e-4998.68%
Oall_contig11233_v2
HSP 1 
Score: 188.475 bits (405), Expect = 7.14131e-49
Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 2
Query:    2 SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSYGGEIFAEADNGE 229
            SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSYGGEIF EADNGE
Sbjct:   30 SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSYGGEIFTEADNGE 257

HSP 2 
Score: 172.896 bits (371), Expect = 3.49584e-44
Identity = 68/76 (89.47%), Postives = 69/76 (90.79%), Query Frame = -1
Query:    3 LLHYQPQQKFPLHMSKAQSW*LLLFHCI*WQPCHMPLQPQSHYRIVQDIYTSCPETAPYELPIDRICVVSLPYTSS 230
            LLHY+PQ KFPLHMSKAQSW*LL FHCI*WQP HMPLQPQSHYRI QDIYTSCPETAPYELPID IC VSLPYT S
Sbjct:   31 LLHYRPQ*KFPLHMSKAQSW*LLPFHCI*WQPYHMPLQPQSHYRIAQDIYTSCPETAPYELPIDHICAVSLPYTLS 258

HSP 3 
Score: 160.524 bits (344), Expect = 1.85261e-40
Identity = 69/76 (90.79%), Postives = 70/76 (92.11%), Query Frame = 3
Query:    3 ARSIGE*HYTNAVDGKLVWGSFWARSIYILDYSIVRLRLQGHMTRLPSNAMEEKQSPTLSLAHMEGKFLLRLIMEK 230
            A+SIGE*H TN VDGKLVWGSFWARSIYIL YSIVRLRLQGHM RLPSNAME KQSPTLSLAHMEGKFLLR IMEK
Sbjct:   31 AQSIGE*HCTNVVDGKLVWGSFWARSIYILGYSIVRLRLQGHMIRLPSNAMEGKQSPTLSLAHMEGKFLLRPIMEK 258

HSP 4 
Score: 160.066 bits (343), Expect = 2.54518e-40
Identity = 68/74 (91.89%), Postives = 69/74 (93.24%), Query Frame = -2
Query:    8 FSIISLSKNFPSI*ARLKVGDCFSSIAFDGSLVICPCSLNLTIE*SKIYILLAQKLPHTSFPSTAFV*CHSPIL 229
            FSII LSKNFPSI*ARLKVGDCF SIAFDGSL+ICPCSLNLTIE* KIYILLAQKLPHTSFPST FV CHSPIL
Sbjct:   36 FSIIGLSKNFPSI*ARLKVGDCFPSIAFDGSLIICPCSLNLTIE*PKIYILLAQKLPHTSFPSTTFVQCHSPIL 257

HSP 5 
Score: 153.193 bits (328), Expect = 2.98356e-38
Identity = 68/76 (89.47%), Postives = 69/76 (90.79%), Query Frame = 1
Query:    1 KLEV*GSDTTQMRSMGSSYGAVSGQEVYISWTIR**D*GCKGI*QGCHQMQWKRSSHQL*ALLIWRGNFC*G**WR 228
            KL+V*GSDT QM SMGSSYGAVSGQEVYISW IR**D*GCKGI* GCHQMQWK SSHQL*ALLIWRGNF *G *WR
Sbjct:   29 KLKV*GSDTAQMWSMGSSYGAVSGQEVYISWAIR**D*GCKGI**GCHQMQWKGSSHQL*ALLIWRGNFY*GR*WR 256

HSP 6 
Score: 84.4613 bits (178), Expect = 1.19185e-29
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = -3
Query:    1 PRYIYFLPRNCPIRASHRPHLCSVTPLYFEL 93
            PRYIYFLPRNCPIRASHRPHLCSVTPLYFEL
Sbjct:   29 PRYIYFLPRNCPIRASHRPHLCSVTPLYFEL 121

HSP 7 
Score: 56.9688 bits (118), Expect = 1.19185e-29
Identity = 24/25 (96.00%), Postives = 24/25 (96.00%), Query Frame = -3
Query:  154 SPLSASAKISPPYEQGSKLVTASLP 228
            SPLSAS KISPPYEQGSKLVTASLP
Sbjct:  182 SPLSASVKISPPYEQGSKLVTASLP 256

Oall_contig11155_v27.7364e-3886.76%
Oall_contig11155_v2
HSP 1 
Score: 151.818 bits (325), Expect = 7.7364e-38
Identity = 59/68 (86.76%), Postives = 64/68 (94.12%), Query Frame = 2
Query:    2 SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSYGGEI 205
            SSKYRGVTLHKCGRWEARMGQFLGKKY+YLGLFD+EIEAARAYDKAAIKCNG+EAVTNF+P  Y  E+
Sbjct:  427 SSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYENEL 630

HSP 2 
Score: 61.5509 bits (128), Expect = 1.7932e-12
Identity = 23/31 (74.19%), Postives = 25/31 (80.65%), Query Frame = -3
Query:    1 PRYIYFLPRNCPIRASHRPHLCSVTPLYFEL 93
            P+  YFLP+N PIRASH PHLC VTPLY EL
Sbjct:  539 PK*TYFLPKNWPIRASHLPHLCKVTPLYLEL 631

HSP 3 
Score: 24.436 bits (47), Expect = 1.7932e-12
Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = -3
Query:  154 GSKLVTASLP 183
            GSKLVTASLP
Sbjct:  449 GSKLVTASLP 478

HSP 4 
Score: 62.0091 bits (129), Expect = 8.38888e-11
Identity = 27/62 (43.55%), Postives = 41/62 (66.13%), Query Frame = -2
Query:    2 ARLKVGDCFSSIAFDGSLVICPCSLNLTIE*SKIYILLAQKLPHTSFPSTAFV*CHSPILRA 187
            A +KVGD F ++A + S +I PC  NL+I+ ++I +L A KL H S PS+  V  ++ +LRA
Sbjct:  445 AWIKVGDSFFAVALNRSFIISPCGFNLSIKQTQINVLFA*KLAHPSLPSSTLVQGYTSVLRA 630

Oall_contig31042_v28.61298e-24100.00%
Oall_contig31042_v2
HSP 1 
Score: 70.715 bits (148), Expect = 8.61298e-24
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = -3
Query:    1 FLPRNCPIRASHRPHLCSVTPLYFEL 78
            FLPRNCPIRASHRPHLCSVTPLYFEL
Sbjct:  223 FLPRNCPIRASHRPHLCSVTPLYFEL 300

HSP 2 
Score: 51.4703 bits (106), Expect = 8.61298e-24
Identity = 18/23 (78.26%), Postives = 20/23 (86.96%), Query Frame = -1
Query:  108 SW*LLLFHCI*WQPCHMPLQPQS 176
            SW*LL FHCI*WQPCHMP  P++
Sbjct:  285 SW*LLPFHCI*WQPCHMPSCPET 353

HSP 3 
Score: 68.8822 bits (144), Expect = 5.0286e-22
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 2
Query:    2 SSKYRGVTLHKCGRWEARMGQFLGKK 79
            SSKYRGVTLHKCGRWEARMGQFLGKK
Sbjct:  224 SSKYRGVTLHKCGRWEARMGQFLGKK 301

HSP 4 
Score: 47.3464 bits (97), Expect = 5.0286e-22
Identity = 18/21 (85.71%), Postives = 19/21 (90.48%), Query Frame = 1
Query:  115 GCKGI*QGCHQMQWKRSSHQL 177
            G +GI*QGCHQMQWK SSHQL
Sbjct:  292 GQEGI*QGCHQMQWKGSSHQL 354

HSP 5 
Score: 58.8016 bits (122), Expect = 4.8573e-19
Identity = 23/25 (92.00%), Postives = 23/25 (92.00%), Query Frame = 3
Query:    3 ARSIGE*HYTNAVDGKLVWGSFWAR 77
            ARSIGE*H TN VDGKLVWGSFWAR
Sbjct:  225 ARSIGE*HCTNVVDGKLVWGSFWAR 299

HSP 6 
Score: 47.3464 bits (97), Expect = 4.8573e-19
Identity = 18/19 (94.74%), Postives = 19/19 (100.00%), Query Frame = 2
Query:  122 RAYDKAAIKCNGREAVTNF 178
            +AYDKAAIKCNGREAVTNF
Sbjct:  299 KAYDKAAIKCNGREAVTNF 355

HSP 7 
Score: 60.6344 bits (126), Expect = 1.23872e-18
Identity = 23/25 (92.00%), Postives = 23/25 (92.00%), Query Frame = -1
Query:    3 SCPETAPYELPIDRICVVSLPYTSS 77
            SCPETAPYELPID IC VSLPYTSS
Sbjct:  225 SCPETAPYELPIDHICAVSLPYTSS 299

HSP 8 
Score: 44.1389 bits (90), Expect = 1.23872e-18
Identity = 17/18 (94.44%), Postives = 17/18 (94.44%), Query Frame = -2
Query:  125 KVGDCFSSIAFDGSLVIC 178
            KVGDCF SIAFDGSLVIC
Sbjct:  302 KVGDCFPSIAFDGSLVIC 355

HSP 9 
Score: 53.7613 bits (111), Expect = 1.6057e-15
Identity = 24/26 (92.31%), Postives = 24/26 (92.31%), Query Frame = 1
Query:    1 KLEV*GSDTTQMRSMGSSYGAVSGQE 78
            KLEV*GSDT QM SMGSSYGAVSGQE
Sbjct:  223 KLEV*GSDTAQMWSMGSSYGAVSGQE 300

HSP 10 
Score: 40.4733 bits (82), Expect = 1.6057e-15
Identity = 16/17 (94.12%), Postives = 16/17 (94.12%), Query Frame = 3
Query:  126 HMTRLPSNAMEEKQSPT 176
            HMTRLPSNAME KQSPT
Sbjct:  303 HMTRLPSNAMEGKQSPT 353

HSP 11 
Score: 62.9255 bits (131), Expect = 4.44462e-11
Identity = 26/40 (65.00%), Postives = 30/40 (75.00%), Query Frame = -2
Query:    2 CSLNLTIE*SKIYILLAQKLPHTSFPSTAFV*CHSPILRA 121
            C  ++  + S +  LLAQKLPHTSFPST FV CHSPILRA
Sbjct:  224 CFPSIAFDGSLVICLLAQKLPHTSFPSTTFVQCHSPILRA 343

Oall_contig25833_v22.35432e-1553.97%
Oall_contig25833_v2
HSP 1 
Score: 77.13 bits (162), Expect = 2.35432e-15
Identity = 34/63 (53.97%), Postives = 42/63 (66.67%), Query Frame = 2
Query:   29 HKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSYGGEIFAEA 217
            H+ GRW+AR+G+  G K +YLG F +E EAA AYD AAIK  G  AVTNFE   Y  E  A++
Sbjct:  209 HQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGANAVTNFEMNRYDVEAIAKS 397

Oall_contig11840_v22.75983e-1386.21%
Oall_contig11840_v2
HSP 1 
Score: 70.2568 bits (147), Expect = 2.75983e-13
Identity = 25/29 (86.21%), Postives = 26/29 (89.66%), Query Frame = -3
Query:    1 YIYFLPRNCPIRASHRPHLCSVTPLYFEL 87
            + YF PRNCPIRASHRPHLC VTPLYFEL
Sbjct:   14 FSYFFPRNCPIRASHRPHLCRVTPLYFEL 100

HSP 2 
Score: 68.8822 bits (144), Expect = 7.15626e-13
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 2
Query:    2 SSKYRGVTLHKCGRWEARMGQFLGKK 79
            SSKYRGVTLHKCGRWEARMGQFLGKK
Sbjct:   22 SSKYRGVTLHKCGRWEARMGQFLGKK 99

Oall_contig31622_v21.35069e-1250.88%
Oall_contig31622_v2
HSP 1 
Score: 67.9658 bits (142), Expect = 1.35069e-12
Identity = 29/57 (50.88%), Postives = 36/57 (63.16%), Query Frame = 2
Query:    8 KYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNF 178
            K+RGV     GRW A +     +K ++LG FD+  EAA  YDKAA+K  GR AVTNF
Sbjct:  405 KFRGVRQRPWGRWAAEIRDPTRRKRVWLGTFDTAEEAASEYDKAAVKLKGRNAVTNF 575

Oall_contig11030_v28.64139e-1160.00%
Oall_contig11030_v2
HSP 1 
Score: 54.2195 bits (112), Expect = 8.64139e-11
Identity = 21/35 (60.00%), Postives = 28/35 (80.00%), Query Frame = 2
Query:   83 IYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPC 187
            ++LG F+ E EAA+AYD AA +  GR+AVTNF+PC
Sbjct:  368 VWLGTFNEEDEAAKAYDIAAQRFRGRDAVTNFKPC 472

HSP 2 
Score: 26.2688 bits (51), Expect = 8.64139e-11
Identity = 10/19 (52.63%), Postives = 13/19 (68.42%), Query Frame = 2
Query:    2 SSKYRGVTLHKCGRWEARM 58
            SSKY+GV     GRW A++
Sbjct:  293 SSKYKGVVPQPNGRWGAQI 349

Blast Hits to Populus Trichocarpa Proteins

Analysis Date: 11-17-2009 (Blast: CC454_contigs_v2_vs_PopulusProt_JamboreeModels1_1)
Best 10 Hits Shown | Show Best 25 Hits
Note: Click a description for more details.
Match Name E value Identity
gw1.28.415.11.98211e-3489.19%
jgi|Poptr1_1|281841|gw1.28.415.1
HSP 1 
Score: 140.584 bits (353), Expect = 1.98211e-34
Identity = 66/74 (89.19%), Postives = 69/74 (93.24%), Query Frame = 2
Query:    2 SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSYGGEIFAEADN 223
            SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSE EAARAYDKAAIKCNGREAVTNFEP +Y GEI +E +N
Sbjct:  107 SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSETEAARAYDKAAIKCNGREAVTNFEPSTYEGEILSEPNN 180

gw1.XVI.2655.13.38096e-3492.96%
jgi|Poptr1_1|256716|gw1.XVI.2655.1
HSP 1 
Score: 139.813 bits (351), Expect = 3.38096e-34
Identity = 66/71 (92.96%), Postives = 67/71 (94.37%), Query Frame = 2
Query:    2 SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSYGGEIFAE 214
            SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEP  Y GEI +E
Sbjct:  110 SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPSKYEGEILSE 180

gw1.X.2501.19.20725e-3281.08%
jgi|Poptr1_1|227804|gw1.X.2501.1
HSP 1 
Score: 131.724 bits (330), Expect = 9.20725e-32
Identity = 60/74 (81.08%), Postives = 68/74 (91.89%), Query Frame = 2
Query:    2 SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSYGGEIFAEADN 223
            SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSE+EAARAYDKAA++ NGREAVTNFEP  Y G++ ++ +N
Sbjct:   64 SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAALEFNGREAVTNFEPSVYKGDVISDPNN 137

grail3.00190035022.6789e-3180.00%
jgi|Poptr1_1|655117|grail3.0019003502
HSP 1 
Score: 130.183 bits (326), Expect = 2.6789e-31
Identity = 60/75 (80.00%), Postives = 66/75 (88.00%), Query Frame = 2
Query:    2 SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSYGGEIFAEADNG 226
            SSKYRGVTLHKCGRWEARMGQFLGKKY+YLGLFD+EIEAARAYDKAAIKCNG+EAVTNF+P  Y  E+ +    G
Sbjct:  265 SSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYENELNSNESPG 339

gw1.V.4061.11.73641e-3083.82%
jgi|Poptr1_1|208660|gw1.V.4061.1
HSP 1 
Score: 127.487 bits (319), Expect = 1.73641e-30
Identity = 57/68 (83.82%), Postives = 64/68 (94.12%), Query Frame = 2
Query:    2 SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSYGGEI 205
            SSKYRGVTLHKCGRWEARMGQFLGKKY+YLGLFD+EIEAARAYD+AA+KCNG+EAVTNF+P  Y  E+
Sbjct:  261 SSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDRAAMKCNGKEAVTNFDPSIYENEL 328

gw1.VIII.1637.12.26782e-3095.08%
jgi|Poptr1_1|420209|gw1.VIII.1637.1
HSP 1 
Score: 127.102 bits (318), Expect = 2.26782e-30
Identity = 58/61 (95.08%), Postives = 60/61 (98.36%), Query Frame = 2
Query:    2 SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEP 184
            SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSE+EAARAYDKAA+ CNGREAVTNFEP
Sbjct:   64 SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAALNCNGREAVTNFEP 124

gw1.XVII.945.12.27837e-1457.81%
jgi|Poptr1_1|258954|gw1.XVII.945.1
HSP 1 
Score: 73.9442 bits (180), Expect = 2.27837e-14
Identity = 37/64 (57.81%), Postives = 46/64 (71.88%), Query Frame = 2
Query:    5 SKYRGVTLHKC-GRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSY 193
            SKYRGV  H   GRWEAR+G+  G KY+YLG + ++ EAARAYD AAI+  G  AVTNF+  +Y
Sbjct:  104 SKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGINAVTNFDLSTY 167

gw1.X.3278.12.97564e-1456.25%
jgi|Poptr1_1|228581|gw1.X.3278.1
HSP 1 
Score: 73.559 bits (179), Expect = 2.97564e-14
Identity = 36/64 (56.25%), Postives = 46/64 (71.88%), Query Frame = 2
Query:    5 SKYRGVTLHKC-GRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSY 193
            SKYRGV  H   GRWEAR+G+  G KY+YLG ++++ EAA AYD AAI+  G  AVTNF+  +Y
Sbjct:  158 SKYRGVARHHHNGRWEARIGRVYGNKYLYLGTYNTQEEAAAAYDMAAIQYRGANAVTNFDVSNY 221

gw1.VIII.1214.15.07567e-1456.25%
jgi|Poptr1_1|419786|gw1.VIII.1214.1
HSP 1 
Score: 72.7886 bits (177), Expect = 5.07567e-14
Identity = 36/64 (56.25%), Postives = 46/64 (71.88%), Query Frame = 2
Query:    5 SKYRGVTLHKC-GRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSY 193
            SKYRGV  H   GRWEAR+G+  G KY+YLG ++++ EAA AYD AAI+  G  AVTNF+  +Y
Sbjct:  101 SKYRGVARHHHNGRWEARIGRVQGNKYLYLGTYNTQEEAAAAYDMAAIEYRGANAVTNFDAGNY 164

gw1.X.6059.18.65779e-1456.25%
jgi|Poptr1_1|231362|gw1.X.6059.1
HSP 1 
Score: 72.0182 bits (175), Expect = 8.65779e-14
Identity = 36/64 (56.25%), Postives = 45/64 (70.31%), Query Frame = 2
Query:    5 SKYRGVTLHKC-GRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSY 193
            SKYRGV  H   GRWEAR+G+  G KY+YLG + ++ EAA AYD AAI+  G  AVTNF+  +Y
Sbjct:   93 SKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAAHAYDIAAIEYRGINAVTNFDLSTY 156

Blast Hits to Contig V2 RO454

Analysis Date: 11-17-2009 (Blast: CC454_contigs_v2_vs_RO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
RO454_contig18066_v21.45231e-1553.97%
RO454_contig18066_v2
HSP 1 
Score: 77.13 bits (162), Expect = 1.45231e-15
Identity = 34/63 (53.97%), Postives = 42/63 (66.67%), Query Frame = 2
Query:   29 HKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSYGGEIFAEA 217
            H+ GRW+AR+G+  G K +YLG F +E EAA AYD AAIK  G  AVTNFE   Y  E  A++
Sbjct:  170 HQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGANAVTNFEMNRYDVEAIAKS 358

RO454_contig7857_v21.70246e-1386.21%
RO454_contig7857_v2
HSP 1 
Score: 70.2568 bits (147), Expect = 1.70246e-13
Identity = 25/29 (86.21%), Postives = 26/29 (89.66%), Query Frame = -3
Query:    1 YIYFLPRNCPIRASHRPHLCSVTPLYFEL 87
            + YF PRNCPIRASHRPHLC VTPLYFEL
Sbjct:   14 FSYFFPRNCPIRASHRPHLCRVTPLYFEL 100

HSP 2 
Score: 68.8822 bits (144), Expect = 4.41449e-13
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 2
Query:    2 SSKYRGVTLHKCGRWEARMGQFLGKK 79
            SSKYRGVTLHKCGRWEARMGQFLGKK
Sbjct:   22 SSKYRGVTLHKCGRWEARMGQFLGKK 99

RO454_contig23004_v28.332e-1350.88%
RO454_contig23004_v2
HSP 1 
Score: 67.9658 bits (142), Expect = 8.332e-13
Identity = 29/57 (50.88%), Postives = 36/57 (63.16%), Query Frame = 2
Query:    8 KYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNF 178
            K+RGV     GRW A +     +K ++LG FD+  EAA  YDKAA+K  GR AVTNF
Sbjct:  209 KFRGVRQRPWGRWAAEIRDPTRRKRVWLGTFDTAEEAASEYDKAAVKLKGRNAVTNF 379

RO454_contig16056_v25.3777e-1160.00%
RO454_contig16056_v2
HSP 1 
Score: 54.2195 bits (112), Expect = 5.3777e-11
Identity = 21/35 (60.00%), Postives = 28/35 (80.00%), Query Frame = 2
Query:   83 IYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPC 187
            ++LG F+ E EAA+AYD AA +  GR+AVTNF+PC
Sbjct:  427 VWLGTFNEEDEAAKAYDIAAQRFRGRDAVTNFKPC 531

HSP 2 
Score: 26.2688 bits (51), Expect = 5.3777e-11
Identity = 10/19 (52.63%), Postives = 13/19 (68.42%), Query Frame = 2
Query:    2 SSKYRGVTLHKCGRWEARM 58
            SSKY+GV     GRW A++
Sbjct:  550 SSKYKGVVPQPNGRWGAQI 606

Blast Hits to TAIR7 Peptides

Analysis Date: 11-17-2009 (Blast: CC454_contigs_v2_vs_TAIR7_pep_20070425)
Best 10 Hits Shown | Show Best 25 Hits
Note: Click a description for more details.
Match Name E value Identity
AT4G36920.1 1.7736e-3181.94%
AP2 (APETALA 2); transcription factor | chr4:17400995-17403137 FORWARD
HSP 1 
Score: 130.568 bits (327), Expect = 1.7736e-31
Identity = 59/72 (81.94%), Postives = 67/72 (93.06%), Query Frame = 2
Query:    2 SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSYGGEIFAEA 217
            SSKYRGVTLHKCGRWEARMGQFLGKKY+YLGLFD+E+EAARAYDKAAIKCNG++AVTNF+P  Y  E+ AE+
Sbjct:  221 SSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDKAAIKCNGKDAVTNFDPSIYDEELNAES 292

AT5G67180.1 8.23871e-2982.09%
AP2 domain-containing transcription factor, putative | chr5:26819345-26821160 REVERSE
HSP 1 
Score: 121.709 bits (304), Expect = 8.23871e-29
Identity = 55/67 (82.09%), Postives = 62/67 (92.54%), Query Frame = 2
Query:    2 SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSYGGE 202
            SSKYRGVTLHKCGRWE+R+GQFL KKY+YLGLFD+EIEAARAYDKAAIKCNG++AVTNF+P  Y  E
Sbjct:  186 SSKYRGVTLHKCGRWESRLGQFLNKKYVYLGLFDTEIEAARAYDKAAIKCNGKDAVTNFDPKVYEEE 252

AT2G28550.2 1.07851e-2065.79%
TOE1 (TARGET OF EAT1 1); DNA binding / transcription factor | chr2:12233521-12235328 REVERSE
HSP 1 
Score: 94.7449 bits (234), Expect = 1.07851e-20
Identity = 50/76 (65.79%), Postives = 53/76 (69.74%), Query Frame = 2
Query:    2 SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSYGGEIFAEADNGE 229
            SSKYRGVTLHKCGRWEARMGQFLGKK               AYDKAAI  NGREAVTNFE  SY  EI +E++N E
Sbjct:  243 SSKYRGVTLHKCGRWEARMGQFLGKK---------------AYDKAAINTNGREAVTNFEMSSYQNEINSESNNSE 303

AT2G28550.1 1.07851e-2065.79%
TOE1 (TARGET OF EAT1 1); DNA binding / transcription factor | chr2:12233245-12235328 REVERSE
HSP 1 
Score: 94.7449 bits (234), Expect = 1.07851e-20
Identity = 50/76 (65.79%), Postives = 53/76 (69.74%), Query Frame = 2
Query:    2 SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSYGGEIFAEADNGE 229
            SSKYRGVTLHKCGRWEARMGQFLGKK               AYDKAAI  NGREAVTNFE  SY  EI +E++N E
Sbjct:  243 SSKYRGVTLHKCGRWEARMGQFLGKK---------------AYDKAAINTNGREAVTNFEMSSYQNEINSESNNSE 303

AT3G54320.3 2.57299e-1456.25%
WRI1 (WRINKLED 1); DNA binding / transcription factor | chr3:20125787-20129451 FORWARD
HSP 1 
Score: 73.559 bits (179), Expect = 2.57299e-14
Identity = 36/64 (56.25%), Postives = 46/64 (71.88%), Query Frame = 2
Query:    5 SKYRGVTLHKC-GRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSY 193
            SKYRGV  H   GRWEAR+G+  G KY+YLG ++++ EAA AYD AAI+  G  AVTNF+  +Y
Sbjct:  166 SKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYNTQEEAAAAYDMAAIEYRGANAVTNFDISNY 229

AT3G54320.2 2.57299e-1456.25%
WRI1 (WRINKLED 1); DNA binding / transcription factor | chr3:20126111-20129451 FORWARD
HSP 1 
Score: 73.559 bits (179), Expect = 2.57299e-14
Identity = 36/64 (56.25%), Postives = 46/64 (71.88%), Query Frame = 2
Query:    5 SKYRGVTLHKC-GRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSY 193
            SKYRGV  H   GRWEAR+G+  G KY+YLG ++++ EAA AYD AAI+  G  AVTNF+  +Y
Sbjct:   92 SKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYNTQEEAAAAYDMAAIEYRGANAVTNFDISNY 155

AT3G54320.1 2.57299e-1456.25%
WRI1 (WRINKLED 1); DNA binding / transcription factor | chr3:20125787-20129577 FORWARD
HSP 1 
Score: 73.559 bits (179), Expect = 2.57299e-14
Identity = 36/64 (56.25%), Postives = 46/64 (71.88%), Query Frame = 2
Query:    5 SKYRGVTLHKC-GRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSY 193
            SKYRGV  H   GRWEAR+G+  G KY+YLG ++++ EAA AYD AAI+  G  AVTNF+  +Y
Sbjct:  166 SKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYNTQEEAAAAYDMAAIEYRGANAVTNFDISNY 229

AT1G51190.1 7.48625e-1452.70%
PLT2 (PLETHORA 2); transcription factor | chr1:18981185-18983973 FORWARD
HSP 1 
Score: 72.0182 bits (175), Expect = 7.48625e-14
Identity = 39/74 (52.70%), Postives = 49/74 (66.22%), Query Frame = 2
Query:    2 SSKYRGVTLH-KCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSYGGEIFAEAD 220
            +S YRGVT H + GRW+AR+G+  G K +YLG F +E EAA AYD AAIK  G  AVTNFE   Y  +   E++
Sbjct:  290 ASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFEINRYDVKAILESN 363

AT3G20840.1 9.77734e-1453.42%
PLT1 (PLETHORA 1); transcription factor | chr3:7300770-7303376 FORWARD
HSP 1 
Score: 71.633 bits (174), Expect = 9.77734e-14
Identity = 39/73 (53.42%), Postives = 48/73 (65.75%), Query Frame = 2
Query:    2 SSKYRGVTLH-KCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSYGGEIFAEA 217
            +S YRGVT H + GRW+AR+G+  G K +YLG F +E EAA AYD AAIK  G  AVTNFE   Y  +   E+
Sbjct:  281 ASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFEINRYDVKAILES 353

AT5G10510.1 2.84477e-1357.35%
AIL6 (AINTEGUMENTA-LIKE 6); DNA binding / transcription factor | chr5:3316037-3320009 FORWARD
HSP 1 
Score: 70.0922 bits (170), Expect = 2.84477e-13
Identity = 39/68 (57.35%), Postives = 46/68 (67.65%), Query Frame = 2
Query:    2 SSKYRGVTLH-KCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPCSYGGE 202
            +S YRGVT H + GRW+AR+G+  G K +YLG F +E EAA AYD AAIK  G  AVTNFE   Y  E
Sbjct:  353 ASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGINAVTNFEMNRYDVE 420

Blast Hits to Contigs V2 WO454

Analysis Date: 11-17-2009 (Blast: CC454_contigs_v2_vs_WO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
WO454_contig20074_v24.10587e-1160.00%
WO454_contig20074_v2
HSP 1 
Score: 54.2195 bits (112), Expect = 4.10587e-11
Identity = 21/35 (60.00%), Postives = 28/35 (80.00%), Query Frame = 2
Query:   83 IYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPC 187
            ++LG F+ E EAA+AYD AA +  GR+AVTNF+PC
Sbjct:  212 VWLGTFNEEDEAAKAYDIAAQRFRGRDAVTNFKPC 316

HSP 2 
Score: 26.2688 bits (51), Expect = 4.10587e-11
Identity = 10/19 (52.63%), Postives = 13/19 (68.42%), Query Frame = 2
Query:    2 SSKYRGVTLHKCGRWEARM 58
            SSKY+GV     GRW A++
Sbjct:  137 SSKYKGVVPQPNGRWGAQI 193

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