CC454_contig23149_v2

NameCC454_contig23149_v2
AccessionID2695701
Sequence
CAAATTCCGCAGGAGGACAGGATATCCTACCATTAGCATTACAAGCTTTC
CAGTCAGACACTGAAGCAGATGAGGAAAGGAATGTACCAGtAATTTTGCT
TGGCCAGCTTCTTCAGTGAAAGTTGCTCGTCACCgGGATATACAAGCTTT
CCTTCCATTTGAGTTCTTTGAAATAAATGTGTCAATTCTTCCAGTGAAGC
TCCCACGACAAAAATCCTTACAACAACCTAAACAGAGATTATATGAACAA
TTTGGACAGCTTCTATGGAGATCCACAATAGAAGTTTTGCAGTTATTGCA
GCAATTTTGCTCATTGCAGCCAAATTCAGACTCCTTGATATGAACTTCGG
AAGTTTTCTTCCCATTTGTTATTGCCTCTGTTTCAAGCTCAACACTCCGG
TCGTGGTTCATTCGTTTTAATACAGGAAGAAGCATACAGATCAAATAATG
GAAACGCAGTATTTTTTCGGCGTTATTTTCCTCCCCTAAAGAATCCTTAC
TTTCTCTGTCTTTAGATTGATTAGCTGAACAATCCTTACAGGTGCAAGTT
CCACGACAGACTGGACACGCCATCTTAACATCTTCTTGAGTATCAAAATA
CCGTTCTTTGATGCAATCCGCACAGAAGAACTCTTTCTGACAACTGGAAC
ACGAGACAAGACTCAACGAGCCGCTTCTTCGACACCAATGGCACCTCCTC
TTCCTCTTTCCCCTCCTTGATTCCGCCACATTCCGACCACAAGGCATGAG
CTGCATTGTGCCGAACGGCAAAGGCTCGATGTTCTTGGACCGGAAACACC
GCCGCCTGGCCACTCCGTTCTCCACTCCTACTTTCACATCGCAATTTCCA
TCTACATTGTTGAAATTCCGCGGCGAAGGCGACGGCACCGGCGATATCGC
CATAACTCCGTTCGGCAATTGTCTCGTCAACTCTTCTTCTTCCTCTTCGC
TGTTGTCCTCCAATTCAATCTCATTCTGCTTCGTCTTCATATTCTTCTTC
ATCTTCACCGAAGAAAATTCGCTTTTCTTGTTCTTCTTCTTGTTCTTGTT
GTTGTTCTTCTTCTTCTCCAAGTCTCTCTTGAGCACCATTCTGATCAGCT
CCAGCTGCAAATTCCCTTTCTTCTTCGACCTCATCTTCCGCAATGTCTCG
TCCAGCAACGCCGCCTCCGAGCCCGAAACCCTCGACGGTTTCTTCACCTT
CC
Length1202
Typecontig
Organism Chinese Chestnut

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References

Dababase Accession
GFF_source SeqManPro

ESTs in this contig

Type Feature Position
EST CCCanker_097202_1586_3648 0-100
EST CCNHS_228395_2835_2609 0-257
EST CCCanker_276859_1845_2784 60-163
EST CCNHS_264008_3531_0723 146-398
EST CCWP2_079799_3609_3604 319-594
EST CCWP2_108141_3820_1276 460-727
EST CCWP2_046572_3875_2972 473-738
EST CCCanker_074251_3687_2267 495-593
EST CCNHS_416332_3396_3601 679-943
EST CCNHS_038825_3887_2535 712-968
EST CCMHS_137528_2971_1714 730-980
EST CCMHS_442300_1540_3457 873-1,129
EST CCMHS_219332_1320_3849 930-1,185
EST CCMHS_179886_1093_3232 944-1,202
EST CCCanker_127223_1868_0663 973-1,082
microsatellite CC454_contig23149_v2-ssr1055 1054 1066 0

GO terms assigned to this feature

Accession Category Term
GO:0009055 molecular_function electron carrier activity
GO:0005515 molecular_function protein binding
GO:0008270 molecular_function zinc ion binding

InterProScan Analysis

Analysis Date: 02-12-2010 (Interpro: CC454_contigs_v2)
SEQUENCE: CC454_contig23149_v2_1_ORF2 CRC64: E037E7D1E736E634 LENGTH: 57 aa
noIPR
unintegrated
unintegrated
seg [15-25]? NA seg seg seg
SEQUENCE: CC454_contig23149_v2_1_ORF3 CRC64: 5BCAC5F6122D978A LENGTH: 63 aa
noIPR
unintegrated
unintegrated
seg [48-63]? NA seg seg seg
SEQUENCE: CC454_contig23149_v2_1_ORF4 CRC64: 828A30697B24A3C2 LENGTH: 161 aa
noIPR
unintegrated
unintegrated
seg [51-61]? NA seg seg[71-98]? NA seg seg[103-116]? NA seg seg[147-156]? NA seg seg seg
SEQUENCE: CC454_contig23149_v2_2_ORF2 CRC64: 1FB90922465E0C5C LENGTH: 89 aa
No hits reported.
SEQUENCE: CC454_contig23149_v2_2_ORF3 CRC64: 042AEDA7F83F9380 LENGTH: 187 aa
noIPR
unintegrated
unintegrated
seg [58-72]? NA seg seg[97-122]? NA seg seg[127-155]? NA seg seg seg
SEQUENCE: CC454_contig23149_v2_3_ORF2 CRC64: A9C5432593F4C0A8 LENGTH: 58 aa
No hits reported.
SEQUENCE: CC454_contig23149_v2_3_ORF3 CRC64: B0B708118C9C4C84 LENGTH: 58 aa
noIPR
unintegrated
unintegrated
seg [22-58]? NA seg seg seg
SEQUENCE: CC454_contig23149_v2_4_ORF1 CRC64: CD6B99644267F7B3 LENGTH: 356 aa
InterPro
IPR001841
Domain
Zinc finger, RING-type
PS50089 [170-216]T 9.126 PS50089 ZF_RING_2 ZF_RING_2
noIPR
unintegrated
unintegrated
coil [37-62]? NA coil coiled-coil[70-95]? NA coil coiled-coil coiled-coil
seg [46-59]? NA seg seg[77-90]? NA seg seg[173-187]? NA seg seg seg
SEQUENCE: CC454_contig23149_v2_5_ORF1 CRC64: 53BF2348941B3E30 LENGTH: 76 aa
noIPR
unintegrated
unintegrated
coil [37-62]? NA coil coiled-coil coiled-coil
seg [1-17]? NA seg seg[21-35]? NA seg seg[46-59]? NA seg seg[66-76]? NA seg seg seg
SEQUENCE: CC454_contig23149_v2_5_ORF2 CRC64: 3324352786D6CE90 LENGTH: 123 aa
noIPR
unintegrated
unintegrated
seg [2-11]? NA seg seg[78-90]? NA seg seg seg
SEQUENCE: CC454_contig23149_v2_6_ORF2 CRC64: DF0D85F6D9EC8286 LENGTH: 54 aa
InterPro
IPR006058
Binding_site
2Fe-2S ferredoxin, iron-sulphur binding site
PS00197 [20-28]? NA PS00197 2FE2S_FER_1 2FE2S_FER_1
noIPR
unintegrated
unintegrated
seg [38-54]? NA seg seg seg
SEQUENCE: CC454_contig23149_v2_6_ORF3 CRC64: 2D295C12F5D80BCA LENGTH: 58 aa
noIPR
unintegrated
unintegrated
seg [3-15]? NA seg seg seg
SEQUENCE: CC454_contig23149_v2_6_ORF4 CRC64: D6F6433225B930AC LENGTH: 57 aa
No hits reported.
SEQUENCE: CC454_contig23149_v2_1_ORF2 CRC64: E037E7D1E736E634 LENGTH: 57 aa
noIPR
unintegrated
unintegrated
SEGseg seg
 NA [15-25]?       
Parent no parent
Children no children
Found in no entries
Contains no entries
GO terms none
SEQUENCE: CC454_contig23149_v2_1_ORF3 CRC64: 5BCAC5F6122D978A LENGTH: 63 aa
noIPR
unintegrated
unintegrated
SEGseg seg
 NA [48-63]?       
Parent no parent
Children no children
Found in no entries
Contains no entries
GO terms none
SEQUENCE: CC454_contig23149_v2_1_ORF4 CRC64: 828A30697B24A3C2 LENGTH: 161 aa
noIPR
unintegrated
unintegrated
SEGseg seg
 NA [51-61]?   NA [71-98]?   NA [103-116]?   NA [147-156]? 
Parent no parent
Children no children
Found in no entries
Contains no entries
GO terms none
SEQUENCE: CC454_contig23149_v2_2_ORF2 CRC64: 1FB90922465E0C5C LENGTH: 89 aa
No hits reported.
SEQUENCE: CC454_contig23149_v2_2_ORF3 CRC64: 042AEDA7F83F9380 LENGTH: 187 aa
noIPR
unintegrated
unintegrated
SEGseg seg
 NA [58-72]?   NA [97-122]?   NA [127-155]?   
Parent no parent
Children no children
Found in no entries
Contains no entries
GO terms none
SEQUENCE: CC454_contig23149_v2_3_ORF2 CRC64: A9C5432593F4C0A8 LENGTH: 58 aa
No hits reported.
SEQUENCE: CC454_contig23149_v2_3_ORF3 CRC64: B0B708118C9C4C84 LENGTH: 58 aa
noIPR
unintegrated
unintegrated
SEGseg seg
 NA [22-58]?       
Parent no parent
Children no children
Found in no entries
Contains no entries
GO terms none
SEQUENCE: CC454_contig23149_v2_4_ORF1 CRC64: CD6B99644267F7B3 LENGTH: 356 aa
InterPro
IPR001841
Domain
Zinc finger, RING-type
PROFILEPS50089ZF_RING_2
 9.126 [170-216]T       
Parent no parent
Children IPR018957
Found in IPR001237 IPR004162 IPR004575 IPR004580 IPR007954 IPR011364 IPR012227 IPR015458 IPR015459 IPR016390 IPR016398 IPR016495 IPR016528 IPR016569 IPR016818 IPR016902 IPR017066 IPR017335 IPR017375 IPR019162
Contains IPR017907
GO terms Molecular Function: protein binding (GO:0005515)
Molecular Function: zinc ion binding (GO:0008270)
noIPR
unintegrated
unintegrated
COILcoil coiled-coil
 NA [37-62]?   NA [70-95]?     
SEGseg seg
 NA [46-59]?   NA [77-90]?   NA [173-187]?   
Parent no parent
Children no children
Found in no entries
Contains no entries
GO terms none
SEQUENCE: CC454_contig23149_v2_5_ORF1 CRC64: 53BF2348941B3E30 LENGTH: 76 aa
noIPR
unintegrated
unintegrated
COILcoil coiled-coil
 NA [37-62]?       
SEGseg seg
 NA [1-17]?   NA [21-35]?   NA [46-59]?   NA [66-76]? 
Parent no parent
Children no children
Found in no entries
Contains no entries
GO terms none
SEQUENCE: CC454_contig23149_v2_5_ORF2 CRC64: 3324352786D6CE90 LENGTH: 123 aa
noIPR
unintegrated
unintegrated
SEGseg seg
 NA [2-11]?   NA [78-90]?     
Parent no parent
Children no children
Found in no entries
Contains no entries
GO terms none
SEQUENCE: CC454_contig23149_v2_6_ORF2 CRC64: DF0D85F6D9EC8286 LENGTH: 54 aa
InterPro
IPR006058
Binding_site
2Fe-2S ferredoxin, iron-sulphur binding site
unknownPS00197 2FE2S_FER_1
 NA [20-28]?       
Parent no parent
Children no children
Found in IPR001041 IPR004489 IPR011884 IPR012175 IPR012675 IPR014307 IPR014313 IPR016208 IPR017611 IPR017697
Contains no entries
GO terms Molecular Function: electron carrier activity (GO:0009055)
noIPR
unintegrated
unintegrated
SEGseg seg
 NA [38-54]?       
Parent no parent
Children no children
Found in no entries
Contains no entries
GO terms none
SEQUENCE: CC454_contig23149_v2_6_ORF3 CRC64: 2D295C12F5D80BCA LENGTH: 58 aa
noIPR
unintegrated
unintegrated
SEGseg seg
 NA [3-15]?       
Parent no parent
Children no children
Found in no entries
Contains no entries
GO terms none
SEQUENCE: CC454_contig23149_v2_6_ORF4 CRC64: D6F6433225B930AC LENGTH: 57 aa
No hits reported.

Blast Hits to Contigs V2 CCall

Analysis Date: 11-17-2009 (Blast: CC454_contigs_v2_vs_CCall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
CCall_contig46788_v2090.00%
CCall_contig46788_v2
HSP 1 
Score: 856.543 bits (1863), Expect = 0
Identity = 360/400 (90.00%), Postives = 360/400 (90.00%), Query Frame = -3
Query:    1 KVKKPSRVSGSEAALLDETLRKMRSKKKGNLQLELIRMVLKRDLEXXXXXXXXXXXXXKSEFSSVKMKKNMKTKQNXXXXXXXXXXXXXELTRQLPNGVMAISPVPSPSPRNFNNVDGNCDVKVGVENGVARRRCFRSKNIEPLPFGTMQLMPCGRNVAESRRGKRKRRCHWXXXXXXXXXXXXXXCQKEFFCADCIKERYFDTQEDVKMACPVCRGTCTCKDCSANQSKDRESKDSLGEENNAEKILRFHYLICMLLPVLKRMNHDRSVELETEAITNGKKTSEVHIKESEFGCNEQNCCNNCKTSIVDLHRSCPNCSYNLCLGCCKDFCRGSFTGRIDTFISKNSNGRKACISR*RATFTEEAGQAKLLVHSFPHLLQCLTGKLVMLMVGYPVLLRNL 1200
            KVKKPSRVSGSEAALLDETLRKMRSKKKGNLQLELIRMVLKRDLE             KSEFSSVKMKKNMKTKQN             ELTRQLPNGVMAISPVPSPSPRNFNNVDGNCDVKVGVENGVARRRCFRSKNIEPLPFGTMQLMPCGRNVAESRRGKRKRRCHW              CQKEFFCADCIKERYFDTQEDVKMACPVCRGTCTCKDCSANQSKDRESKDSLGEENNAEKILRFHYLICMLLPVLKRMNHDRSVELETEAITNGKKTSEVHIKESEFGCNEQNCCNNCKTSIVDLHRSCPNCSYNLCLGCCKDFCRGSFTGRIDTFISKNSNGRKACISR*RATFTEEAGQAKLLVHSFPHLLQCLTGKLVMLMVGYPVLLRNL
Sbjct:    1 KVKKPSRVSGSEAALLDETLRKMRSKKKGNLQLELIRMVLKRDLEKKKNNNKNKKKNKKSEFSSVKMKKNMKTKQNEIELEDNSEEEEEELTRQLPNGVMAISPVPSPSPRNFNNVDGNCDVKVGVENGVARRRCFRSKNIEPLPFGTMQLMPCGRNVAESRRGKRKRRCHWCRRSGSLSLVSCSSCQKEFFCADCIKERYFDTQEDVKMACPVCRGTCTCKDCSANQSKDRESKDSLGEENNAEKILRFHYLICMLLPVLKRMNHDRSVELETEAITNGKKTSEVHIKESEFGCNEQNCCNNCKTSIVDLHRSCPNCSYNLCLGCCKDFCRGSFTGRIDTFISKNSNGRKACISR*RATFTEEAGQAKLLVHSFPHLLQCLTGKLVMLMVGYPVLLRNL 1200

HSP 2 
Score: 747.947 bits (1626), Expect = 0
Identity = 311/322 (96.58%), Postives = 311/322 (96.58%), Query Frame = 3
Query:    3 NSAGGQDILPLALQAFQSDTEADEERNVPVIXXXXXXXXXXXVTGIYKLSFHLSSLK*MCQFFQ*SSHDKNPYNNLNRDYMNNLDSFYGDPQ*KFCSYCSNFAHCSQIQTP*YELRKFSSHLLLPLFQAQHSGRGSFVLIQEEAYRSNNGNAVFFRRYFPPLKNPYFLCL*ID*LNNPYRCKFHDRLDTPS*HLLEYQNTVL*CNPHRRTLSDNWNTRQDSTSRFFDTNGTSSSSFPSLIPPHSDHKA*AALCRTAKARCSWTGNTAAWPLRSPLLLSHRNFHLHC*NSAAKATAPAISP*LRSAIVSSTLLLPLRCCPPIQ 968
            NSAGGQDILPLALQAFQSDTEADEERNVPVI           VTGIYKLSFHLSSLK*MCQFFQ*SSHDKNPYNNLNRDYMNNLDSFYGDPQ*KFCSYCSNFAHCSQIQTP*YELRKFSSHLLLPLFQAQHSGRGSFVLIQEEAYRSNNGNAVFFRRYFPPLKNPYFLCL*ID*LNNPYRCKFHDRLDTPS*HLLEYQNTVL*CNPHRRTLSDNWNTRQDSTSRFFDTNGTSSSSFPSLIPPHSDHKA*AALCRTAKARCSWTGNTAAWPLRSPLLLSHRNFHLHC*NSAAKATAPAISP*LRSAIVSSTLLLPLRCCPPIQ
Sbjct:    3 NSAGGQDILPLALQAFQSDTEADEERNVPVILLGQLLQ*KLLVTGIYKLSFHLSSLK*MCQFFQ*SSHDKNPYNNLNRDYMNNLDSFYGDPQ*KFCSYCSNFAHCSQIQTP*YELRKFSSHLLLPLFQAQHSGRGSFVLIQEEAYRSNNGNAVFFRRYFPPLKNPYFLCL*ID*LNNPYRCKFHDRLDTPS*HLLEYQNTVL*CNPHRRTLSDNWNTRQDSTSRFFDTNGTSSSSFPSLIPPHSDHKA*AALCRTAKARCSWTGNTAAWPLRSPLLLSHRNFHLHC*NSAAKATAPAISP*LRSAIVSSTLLLPLRCCPPIQ 968

HSP 3 
Score: 84.4613 bits (178), Expect = 0
Identity = 38/62 (61.29%), Postives = 38/62 (61.29%), Query Frame = 1
Query: 1015 KFAFXXXXXXXXXXXXXXQVSLEHHSDQLQLQIPFLLRPHLPQCLVQQXXXXXXXXXXFLHL 1200
            KFAF              QVSLEHHSDQLQLQIPFLLRPHLPQCLVQQ          FLHL
Sbjct: 1015 KFAFLVLLLVLVVVLLLLQVSLEHHSDQLQLQIPFLLRPHLPQCLVQQRRLRARNPRRFLHL 1200

HSP 4 
Score: 366.26 bits (793), Expect = 0
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 2
Query:    2 KFRRRTGYPTISITSFPVRH*SR*GKECTSNFAWPASSVKVARHRDIQAFLPFEFFEINVSILPVKLPRQKSLQQPKQRLYEQFGQLLWRSTIEVLQLLQQFCSLQPNSDSLI*TSEVFFPFVIASVSSSTLRSWFIRFNTGRSIQIK*WKRSIFSA 472
            KFRRRTGYPTISITSFPVRH*SR*GKECTSNFAWPASSVKVARHRDIQAFLPFEFFEINVSILPVKLPRQKSLQQPKQRLYEQFGQLLWRSTIEVLQLLQQFCSLQPNSDSLI*TSEVFFPFVIASVSSSTLRSWFIRFNTGRSIQIK*WKRSIFSA
Sbjct:    2 KFRRRTGYPTISITSFPVRH*SR*GKECTSNFAWPASSVKVARHRDIQAFLPFEFFEINVSILPVKLPRQKSLQQPKQRLYEQFGQLLWRSTIEVLQLLQQFCSLQPNSDSLI*TSEVFFPFVIASVSSSTLRSWFIRFNTGRSIQIK*WKRSIFSA 472

HSP 5 
Score: 268.661 bits (580), Expect = 0
Identity = 115/130 (88.46%), Postives = 115/130 (88.46%), Query Frame = 2
Query:  539 QVQVPRQTGHAILTSS*VSKYRSLMQSAQKNSF*QLEHETRLNEPLLRHQWHLLFLFPLLDSATFRPQGMSCIVPNGKGSMFLDRKHRRLAXXXXXXXXXXXXXXXLLKFRGEGDGTGDIAITPFGNCLV 928
            QVQVPRQTGHAILTSS*VSKYRSLMQSAQKNSF*QLEHETRLNEPLLRHQWHLLFLFPLLDSATFRPQGMSCIVPNGKGSMFLDRKHRRLA               LLKFRGEGDGTGDIAITPFGNCLV
Sbjct:  539 QVQVPRQTGHAILTSS*VSKYRSLMQSAQKNSF*QLEHETRLNEPLLRHQWHLLFLFPLLDSATFRPQGMSCIVPNGKGSMFLDRKHRRLATPFSTPTFTSQFPSTLLKFRGEGDGTGDIAITPFGNCLV 928

HSP 6 
Score: 81.2538 bits (171), Expect = 0
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 2
Query: 1106 CKFPFFFDLIFRNVSSSNAASEPETLDGFFTF 1201
            CKFPFFFDLIFRNVSSSNAASEPETLDGFFTF
Sbjct: 1106 CKFPFFFDLIFRNVSSSNAASEPETLDGFFTF 1201

HSP 7 
Score: 294.779 bits (637), Expect = 1.52075e-163
Identity = 130/142 (91.55%), Postives = 130/142 (91.55%), Query Frame = -2
Query:  506 VDETIAERSYGDIAGAVAFAAEFQQCRWKLRCESRSGERSGQAAVFPVQEHRAFAVRHNAAHALWSXXXXXXXXXXXXEVPLVSKKRLVESCLVFQLSERVLLCGLHQRTVF*YSRRC*DGVSSLSWNLHL*GLFS*SI*RQ 931
            VDETIAERSYGDIAGAVAFAAEFQQCRWKLRCESRSGERSGQAAVFPVQEHRAFAVRHNAAHALWS            EVPLVSKKRLVESCLVFQLSERVLLCGLHQRTVF*YSRRC*DGVSSLSWNLHL*GLFS*SI*RQ
Sbjct:  506 VDETIAERSYGDIAGAVAFAAEFQQCRWKLRCESRSGERSGQAAVFPVQEHRAFAVRHNAAHALWSECGGIKEGKEEEEVPLVSKKRLVESCLVFQLSERVLLCGLHQRTVF*YSRRC*DGVSSLSWNLHL*GLFS*SI*RQ 931

HSP 8 
Score: 176.103 bits (378), Expect = 1.52075e-163
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = -2
Query:    2 WELHWKN*HIYFKELKWKESLYIPVTSNFH*RSWPSKITGTFLSSSASVSDWKACNANGRISCPPAEF 205
            WELHWKN*HIYFKELKWKESLYIPVTSNFH*RSWPSKITGTFLSSSASVSDWKACNANGRISCPPAEF
Sbjct:    2 WELHWKN*HIYFKELKWKESLYIPVTSNFH*RSWPSKITGTFLSSSASVSDWKACNANGRISCPPAEF 205

HSP 9 
Score: 121.118 bits (258), Expect = 1.52075e-163
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = -2
Query:  320 NTAFPLFDLYASSCIKTNEPRPEC*A*NRGNNKWEENFRSSYQGV*IW 463
            NTAFPLFDLYASSCIKTNEPRPEC*A*NRGNNKWEENFRSSYQGV*IW
Sbjct:  320 NTAFPLFDLYASSCIKTNEPRPEC*A*NRGNNKWEENFRSSYQGV*IW 463

HSP 10 
Score: 34.9748 bits (70), Expect = 1.52075e-163
Identity = 17/30 (56.67%), Postives = 17/30 (56.67%), Query Frame = -2
Query: 1007 DQNGAQERLGXXXXXXXXXXXXXEKRIFFG 1096
            DQNGAQERLG             EKRIFFG
Sbjct: 1007 DQNGAQERLGEEEEQQQEQEEEQEKRIFFG 1096

HSP 11 
Score: 26.2688 bits (51), Expect = 1.52075e-163
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = -2
Query:  260 NFYCGSP*K 286
            NFYCGSP*K
Sbjct:  260 NFYCGSP*K 286

HSP 12 
Score: 295.237 bits (638), Expect = 1.23682e-158
Identity = 126/137 (91.97%), Postives = 126/137 (91.97%), Query Frame = 1
Query:  259 ASMEIHNRSFXXXXXXXXXXXKFRLLDMNFGSFLPICYCLCFKLNTPVVVHSF*YRKKHTDQIMETQYFFGVIFLP*RILTFSVFRLIS*TILTGASSTTDWTRHLNIFLSIKIPFFDAIRTEELFLTTGTRDKTQR 669
            ASMEIHNRSF           KFRLLDMNFGSFLPICYCLCFKLNTPVVVHSF*YRKKHTDQIMETQYFFGVIFLP*RILTFSVFRLIS*TILTGASSTTDWTRHLNIFLSIKIPFFDAIRTEELFLTTGTRDKTQR
Sbjct:  259 ASMEIHNRSFAVIAAILLIAAKFRLLDMNFGSFLPICYCLCFKLNTPVVVHSF*YRKKHTDQIMETQYFFGVIFLP*RILTFSVFRLIS*TILTGASSTTDWTRHLNIFLSIKIPFFDAIRTEELFLTTGTRDKTQR 669

HSP 13 
Score: 160.066 bits (343), Expect = 1.23682e-158
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 1
Query:    1 QIPQEDRISYH*HYKLSSQTLKQMRKGMYQ*FCLASFFSESCSSPGYTSFPSI*VL*NKCVNSSSEAP 204
            QIPQEDRISYH*HYKLSSQTLKQMRKGMYQ*FCLASFFSESCSSPGYTSFPSI*VL*NKCVNSSSEAP
Sbjct:    1 QIPQEDRISYH*HYKLSSQTLKQMRKGMYQ*FCLASFFSESCSSPGYTSFPSI*VL*NKCVNSSSEAP 204

HSP 14 
Score: 143.112 bits (306), Expect = 1.23682e-158
Identity = 59/70 (84.29%), Postives = 59/70 (84.29%), Query Frame = 1
Query:  721 FRHIPTTRHELHCAERQRLDVLGPETPPPGHSVLHSYFHIAISIYIVEIPXXXXXXXXXXXNSVRQLSRQ 930
            FRHIPTTRHELHCAERQRLDVLGPETPPPGHSVLHSYFHIAISIYIVEIP           NSVRQLSRQ
Sbjct:  721 FRHIPTTRHELHCAERQRLDVLGPETPPPGHSVLHSYFHIAISIYIVEIPRRRRRHRRYRHNSVRQLSRQ 930

HSP 15 
Score: 261.788 bits (565), Expect = 3.62206e-149
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = -1
Query:  258 IASKNGILILKKMLRWRVQSVVELAPVRIVQLINLKTEKVRIL*GRKITPKKYCVSII*SVCFFLY*NE*TTTGVLSLKQRQ*QMGRKLPKFISRSLNLAAMSKIAAITAKLLLWISIEA 617
            IASKNGILILKKMLRWRVQSVVELAPVRIVQLINLKTEKVRIL*GRKITPKKYCVSII*SVCFFLY*NE*TTTGVLSLKQRQ*QMGRKLPKFISRSLNLAAMSKIAAITAKLLLWISIEA
Sbjct:  258 IASKNGILILKKMLRWRVQSVVELAPVRIVQLINLKTEKVRIL*GRKITPKKYCVSII*SVCFFLY*NE*TTTGVLSLKQRQ*QMGRKLPKFISRSLNLAAMSKIAAITAKLLLWISIEA 617

HSP 16 
Score: 159.149 bits (341), Expect = 3.62206e-149
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = -1
Query:    3 GASLEELTHLFQRTQMEGKLVYPGDEQLSLKKLAKQNYWYIPFLICFSV*LESL*C*W*DILSSCGI 203
            GASLEELTHLFQRTQMEGKLVYPGDEQLSLKKLAKQNYWYIPFLICFSV*LESL*C*W*DILSSCGI
Sbjct:    3 GASLEELTHLFQRTQMEGKLVYPGDEQLSLKKLAKQNYWYIPFLICFSV*LESL*C*W*DILSSCGI 203

HSP 17 
Score: 145.861 bits (312), Expect = 3.62206e-149
Identity = 64/80 (80.00%), Postives = 64/80 (80.00%), Query Frame = -1
Query:  717 TTAXXXXXXXRDNCRTELWXXXXXXXXXRGISTM*MEIAM*K*EWRTEWPGGGVSGPRTSSLCRSAQCSSCLVVGMWRNQ 956
            TTA       RDNCRTELW         RGISTM*MEIAM*K*EWRTEWPGGGVSGPRTSSLCRSAQCSSCLVVGMWRNQ
Sbjct:  717 TTAKRKKKS*RDNCRTELWRYRRCRRLRRGISTM*MEIAM*K*EWRTEWPGGGVSGPRTSSLCRSAQCSSCLVVGMWRNQ 956

CCall_contig39685_v21.72828e-2046.34%
CCall_contig39685_v2
HSP 1 
Score: 97.7493 bits (207), Expect = 1.72828e-20
Identity = 38/82 (46.34%), Postives = 56/82 (68.29%), Query Frame = -3
Query:  187 LLPVLKRMNHDRSVELETEAITNGKKTSEVHIKESEFGCNEQNCCNNCKTSIVDLHRSCPNCSYNLCLGCCKDFCRGSFTGR 432
            LLP LK++  +++ E+E EA   GK  SE+ ++++    +E+  C++C TSIVDLHRSCP CSY LCL CC++  + S T R
Sbjct:    2 LLPYLKQICEEQTKEMEIEANIQGKSYSEIEVQQTICYNDERIFCDHCATSIVDLHRSCPTCSYELCLSCCEEIRKESLTSR 247

CCall_contig44104_v26.30784e-2036.84%
CCall_contig44104_v2
HSP 1 
Score: 71.1732 bits (149), Expect = 6.30784e-20
Identity = 28/76 (36.84%), Postives = 48/76 (63.16%), Query Frame = -3
Query:  241 EKILRFHYLICMLLPVLKRMNHDRSVELETEAITNGKKTSEVHIKESEFGCNEQNCCNNCKTSIVDLHRSCPNCSY 468
            E+   + Y++ +LLP L+R++ ++ VE   EA   G    E+ I++++   +E+  C+ C+TSI D HRSCP CS+
Sbjct:  269 EEFEHYKYMLQVLLPFLQRISEEQMVEKNLEAKRQGLLLPELKIEKADCPIDERVYCDICRTSIFDFHRSCPRCSF 496

HSP 2 
Score: 37.2658 bits (75), Expect = 6.30784e-20
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = -3
Query:  529 QEDVKMACPVCRGTCTCKDC 588
            ++ +  ACPVCRG C CK C
Sbjct:  557 EDYIAEACPVCRGNCNCKAC 616

HSP 3 
Score: 23.9778 bits (46), Expect = 6.30784e-20
Identity = 7/18 (38.89%), Postives = 11/18 (61.11%), Query Frame = -3
Query:  190 YNLCLGCCKDFCRGSFTG 243
            ++LCL CC++   G   G
Sbjct:  217 FDLCLTCCREIRDGHLQG 270

CCall_contig28090_v22.74065e-1740.28%
CCall_contig28090_v2
HSP 1 
Score: 70.2568 bits (147), Expect = 2.74065e-17
Identity = 29/72 (40.28%), Postives = 45/72 (62.50%), Query Frame = -3
Query:  250 KILRFHYLICMLLPVLKRMNHDRSVELETEAITNGKKTSEVHIKESEFGCNEQNCCNNCKTSIVDLHRSCPN 465
            K+ +F YL+   LP+L+ +  ++S EL+ EA  +G K  E  I  S    +++  C+NC TSIV++HRSC N
Sbjct:  140 KLQKFLYLLYKTLPLLRHIQQEQSSELDVEASIHGVKIMEEDISRSVLDDDDRVYCDNCNTSIVNIHRSCSN 355

HSP 2 
Score: 35.8912 bits (72), Expect = 2.74065e-17
Identity = 13/28 (46.43%), Postives = 19/28 (67.86%), Query Frame = -3
Query:  178 SCPNCSYNLCLGCCKDFCRGSFTGRIDT 261
            S P+CSY+LCL CC++  +G   G  +T
Sbjct:  350 SNPDCSYDLCLTCCQELRKGFQHGGDET 433

Blast Hits to MedicagoProt

Analysis Date: 11-17-2009 (Blast: CC454_contigs_v2_vs_MedicagoProt_20080227)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
IMGA|AC149642_41.5 Zinc finger, RING-type; Tran1.04608e-7041.44%
cription factor jumonji, jmjC; Zinc finger, C2H2-type chr04_pseudomolecule_IMGAG_V2 24626165-24633547 E EGN_Mt071002 20080227
HSP 1 
Score: 263.462 bits (672), Expect = 1.04608e-70
Identity = 150/362 (41.44%), Postives = 212/362 (58.56%), Query Frame = -3
Query:  139 KKPSRVSGSEAALLDETLRKMRSKKKG----NLQLELIRMVLKRDLEXXXXXXXXXXXXXKSEFSSVKMKKNMKTKQNXXXXXXXXXXXXXELTRQLPNGVMAISPVPSPSPRNFNNVDGNCDVKVGVENGVA-RRRCFRSKNIEPLPFGTMQLMPCGRNVAESRRGKRKRRCHWXXXXXXXXXXXXXXCQKEFFCADCIKERYFDTQEDVKMACPVCRGTCTCKDCSANQSKDRESKDS-----LGEENNAEKILRFHYLICMLLPVLKRMNHDRSVELETEAITNGKKTSEVHIKESEFGCNEQNCCNNCKTSIVDLHRSCPNCSYNLCLGCCKDFCRGSFTGRIDTFISKNSNGRKACI 1194
            KK  +++ S  +L D     + ++KK     + QL+LIRMVL+R++E              +  +  K KK    K+              EL R+LPNGVM ISP  +P   ++ NV  +CDVKVG    VA     FRSKNI+ +  G +Q++P G ++   ++G  KR+CH               C KEFFC DCI++RY DT+++VK ACPVC+ TCTCK C A Q+ D ESKDS     L  ++  ++IL FHYLICMLLPVLKR++ +R  ELETEA   GK  S++ IK+ EFG +E   CN+CKT ++DLHR+C +CSY+LCL CC+  C+ + +G I++   K  +  K C+
Sbjct:  103 KKKVKLAESSESLTDSPSGSVPARKKTLKQCDTQLDLIRMVLEREVEKRKR----------NNTNKKKNKKKKMKKKVIKEEVELHDFKEGELRRELPNGVMEISPASTPG--DYKNVGTHCDVKVGDHKIVAVTPHYFRSKNIDRVALGKLQVVPYGPSL---KKGNTKRKCHSCQRSDSLNLVQCSSCNKEFFCFDCIRDRYLDTRKEVKKACPVCQRTCTCKVCLAGQNNDSESKDSESKANLSSKSRVDRILHFHYLICMLLPVLKRISENRETELETEAKIKGKSISDIQIKQVEFGYSENIYCNHCKTPVLDLHRTCDSCSYSLCLRCCEKLCQRT-SGEINSSFLKLRDQMKVCV 448

IMGA|AC159536_33.4 Zinc finger, RING-type; Tran6.4204e-2842.67%
cription factor jumonji, jmjC chr08_pseudomolecule_IMGAG_V2 34701365-34695690 E EGN_Mt071002 20080227
HSP 1 
Score: 121.324 bits (303), Expect = 6.4204e-28
Identity = 64/150 (42.67%), Postives = 88/150 (58.67%), Query Frame = -3
Query:  187 EFFCADCIKERYFD-TQEDVKMACPVCRGTCTCKDCSANQSKDRESKDSLGEENNAEKILRFHYLICMLLPVLKRMNHDRSVELETEAITNGKKTSEVHIKESEFGCNEQNCCNNCKTSIVDLHRSCPNCSYNLCLGCCKDFCRGSFTGR 633
            + +C  CI + Y D + E+V  +CP C   C C  C  ++   + S   +    N EK    HY+I +LLP LK++ H++ VE + EA   GK +SE+ I +S  G  E+  C++C TSIVDLHR CPNCSY LCL CCK+   GS T R
Sbjct:  193 KMYCMRCINQWYPDMSTEEVAESCPFCIKNCNCNVCLRSKGTIKTSNMDI---TNYEKAQYLHYMINLLLPYLKQICHEQCVEEDIEAKIQGK-SSEIEIPQSLCGDKERVYCDHCATSIVDLHRICPNCSYELCLKCCKEIREGSITPR 338

IMGA|AC169089_52.4 Zinc finger, RING-type; Tran1.74844e-2538.31%
cription factor jumonji, jmjC; Zinc finger, FYVE/PHD-type chr01_pseudomolecule_IMGAG_V2 28310266-28319310 H EGN_Mt071002 20080227
HSP 1 
Score: 113.235 bits (282), Expect = 1.74844e-25
Identity = 59/154 (38.31%), Postives = 87/154 (56.49%), Query Frame = -3
Query:  181 QKEFFCADCIKERYFDT-QEDVKMACPVCRGTCTCKDCSANQSKDRESKDSLGEENNAEKILRFHYLICMLLPVLKRMNHDRSVELETEAITNGKKTSEVHIKESEFGCNEQNCCNNCKTSIVDLHRSCPNCSYNLCLGCCKDFCRGSFTGRID 639
            +++ FC  C+   Y    +E+V  ACPVC G C CK C  + +  +E K      NN E  L   Y++  LLP L+R++ ++ VE E EA   G   S++ +K +++  N++  C+NCKTSI D HRSC  CS+N+CL CC +   G   G  D
Sbjct:  345 KRKRFCIPCLNNWYPHLKEEEVAEACPVCCGNCNCKACLRSCALIKEIKTKTETNNNHEFELS-KYMVKELLPYLRRLDEEQMVEKEIEAKRQGLSHSKLKVKVADYPKNKRVYCDNCKTSIFDYHRSCTECSFNICLLCCCELRCGKLLGGTD 497

IMGA|AC151823_59.4 Zinc finger, RING-type; Tran7.34588e-2431.60%
cription factor jumonji, jmjC; Cupin region; Zinc finger, FYVE/PHD-type chr01_pseudomolecule_IMGAG_V2 28286084-28291378 H EGN_Mt071002 20080227
HSP 1 
Score: 107.842 bits (268), Expect = 7.34588e-24
Identity = 67/212 (31.60%), Postives = 103/212 (48.58%), Query Frame = -3
Query:  181 VARRRCFRSKNIEPLPFGTMQLMPCGRNVAESRRGKRKRRCHWXXXXXXXXXXXXXXCQKEFFCADCIKERYFDTQE-DVKMACPVCRGTCTCKDCSANQSKDRESKDSLGEENNAEKILRFHYLICMLLPVLKRMNHDRSVELETEAITNGKKTSEVHIKESEFGCNEQNCCNNCKTSIVDLHRSCPNCSYNLCLGCCKDFCRGSFTGRID 813
            V ++   R  N + +  G++    C RN  +  R  R  +C                 ++  +C  C+   Y   +E D+  ACPVC   C CK C  +     E K    E  N E++    YL+  LLP L+R++ ++ +E E EA   G   S+++IK +++  +E+  C+NCKTSI D HRSC  CS++LCL CC +   G   G  D
Sbjct:  204 VLKKLKIRESNAKWIEEGSLMCHQCQRN--DKGRVVRCTKC-----------------KRRRYCIPCLNNWYPKLKESDIAKACPVCCDNCNCKACLRSFKLIDEMKRK-AETINEEEVEFSKYLLKGLLPHLRRLDAEQMIEKEREAKRRGLSLSKLNIKPADYSKDERVFCDNCKTSIFDYHRSCSKCSFDLCLLCCCELRGGKLLGGAD 395

IMGA|AC161241_11.5 Zinc finger, RING-type; Tran2.79143e-2335.97%
cription factor jumonji, jmjC chr01_pseudomolecule_IMGAG_V2 20618095-20609844 E EGN_Mt071002 20080227
HSP 1 
Score: 105.916 bits (263), Expect = 2.79143e-23
Identity = 50/139 (35.97%), Postives = 78/139 (56.12%), Query Frame = -3
Query:  214 FCADCIKERYFDTQ-EDVKMACPVCRGTCTCKDCSANQSKDRESKDSLGEENNAEKILRFHYLICMLLPVLKRMNHDRSVELETEAITNGKKTSEVHIKESEFGCNEQNCCNNCKTSIVDLHRSCPNCSYNLCLGCCKD 627
            +C  CI   Y D   ++++  CP CRG C CK C  +   D   K  + E    +K+   H L+  +LPV+K+++ ++  E+E E    G   +E+ +  ++   +EQ CCN C+  I D HR CP+CSY+LCL CC+D
Sbjct:  219 YCDSCISTWYSDIPLDEIQKICPACRGICNCKICLRS---DNSIKVRIREIPVLDKLQYLHVLLSSVLPVVKQIHREQCFEVELEKKLRG---AEIDLPRTKLNADEQMCCNLCRIPITDYHRRCPSCSYDLCLICCRD 351

IMGA|AC169089_55.4 Zinc finger, RING-type; Tran2.36309e-2234.42%
cription factor jumonji, jmjC; Zinc finger, FYVE/PHD-type chr01_pseudomolecule_IMGAG_V2 28327085-28332097 E EGN_Mt071002 20080227
HSP 1 
Score: 102.834 bits (255), Expect = 2.36309e-22
Identity = 53/154 (34.42%), Postives = 82/154 (53.25%), Query Frame = -3
Query:  181 QKEFFCADCIKERYFDTQED-VKMACPVCRGTCTCKDCSANQSKDRESKDSLGEENNAEKILRFHYLICMLLPVLKRMNHDRSVELETEAITNGKKTSEVHIKESEFGCNEQNCCNNCKTSIVDLHRSCPNCSYNLCLGCCKDFCRGSFTGRID 639
            +++ +C  C+   Y   +E+ +  ACPVC G C CK C  +       K    E NN+ ++    Y++ +L P L R++ ++  E E EA   G   SE++IK ++    E+  C+ CKTSI D HRSC  CS+++CL CC +   G   G  D
Sbjct:  361 KRKRYCIPCLNNWYPHLKEEKIAEACPVCCGNCNCKACLRSSVLINGIKKKT-ETNNSHEVEPSKYMLKVLFPYLSRLDEEQMAEKEIEAKIQGLSLSELNIKVADIPKKERVYCDICKTSIFDYHRSCTKCSFDICLLCCCELRGGKLLGGAD 513

IMGA|AC150444_5.5 HMG-I and HMG-Y, DNA-binding; Zinc finger, RING-type; Tran1.17279e-2132.02%
cription factor jumonji, jmjC chr01_pseudomolecule_IMGAG_V2 1856248-1877865 E EGN_Mt071002 20080227
HSP 1 
Score: 100.523 bits (249), Expect = 1.17279e-21
Identity = 57/178 (32.02%), Postives = 92/178 (51.69%), Query Frame = -3
Query:  202 ESRRGKRKRRCHWXXXXXXXXXXXXXXCQKEFFCADCIKERYFD-TQEDVKMACPVCRGTCTCKDCSANQSKDRESKDSLGEENNAEKILRFHYLICMLLPVLKRMNHDRSVELETEAITNGK-KTSEVHIKESEFGCNEQNCCNNCKTSIVDLHRSC--PNCSYNLCLGCCKDFCRG 723
            E+++  R  RCH               C+++ +C +CI + Y D T+E+++ ACP C   C C+ C     K   + +  GE +   K+ +  YL+   LP+L+ +  ++  ELE EA  +G     E  I ++    +++  C+NC TSIV+ HRSC  P C Y+LCL CC +   G
Sbjct:  860 ETKKEPRNLRCHQCWKKSRTGIVVCTKCKRKKYCYECIAKWYQDKTREEIETACPFCLDYCNCRLCL---KKTISTMNGNGEADADVKLQKLFYLLKKTLPLLQHIQREQKSELEVEASIHGSLMVEEKDILQAAVDDDDRVYCDNCNTSIVNFHRSCVNPYCRYDLCLTCCTELRNG 1034

IMGA|CT863712_25.5 Tran1.38859e-1435.34%
cription factor jumonji, jmjC; Zinc finger, FYVE/PHD-type chr05_pseudomolecule_IMGAG_V2 19264599-19259196 H EGN_Mt071002 20080227
HSP 1 
Score: 77.0258 bits (188), Expect = 1.38859e-14
Identity = 41/116 (35.34%), Postives = 66/116 (56.90%), Query Frame = -3
Query:  190 DCSANQSKDRESKDSLGEENNAEKILRFHYLICMLLPVLKRMNHDRSVELETEAITNGKKT-SEVHIKESEFGCNEQNCCNNCKTSIVDLHRSCPNCSYNLCLGCCKDFCRGSFTG 534
            DC   ++++++      E NN   I    Y++  LLP L++++ ++  E+E EA   G  + SE+ IK +    +E   C+NC++SI D HRSC  CS++LCL CC +  RG   G
Sbjct:   94 DCMHKETRNKK------ESNNDHDIEASKYMLEYLLPYLRQLDLEQMAEMEIEARLQGLSSLSELKIKGAYCSKDECAYCDNCQSSIFDYHRSCAKCSFDLCLRCCYELRRGELHG 203

Blast Hits to Contig V2 Oall

Analysis Date: 11-17-2009 (Blast: CC454_contigs_v2_vs_Oall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
Oall_contig32084_v25.62929e-7491.80%
Oall_contig32084_v2
HSP 1 
Score: 275.076 bits (594), Expect = 5.62929e-74
Identity = 112/122 (91.80%), Postives = 115/122 (94.26%), Query Frame = 3
Query:  336 *YELRKFSSHLLLPLFQAQHSGRGSFVLIQEEAYRSNNGNAVFFRRYFPPLKNPYFLCL*ID*LNNPYRCKFHDRLDTPS*HLLEYQNTVL*CNPHRRTLSDNWNTRQDSTSRFFDTNGTSS 701
            *YE RKFSSHL LPLFQAQHSGRGSFVLIQEEAYRSNNG+ VFF+ YFPPLKNPYFLCL*ID*LNNPYRCKFHDRLDTPS*HLLEYQNTVL*CNPHRRTLSDNWNT+QDST RFF  NGTSS
Sbjct:    1 *YERRKFSSHLYLPLFQAQHSGRGSFVLIQEEAYRSNNGSVVFFQLYFPPLKNPYFLCL*ID*LNNPYRCKFHDRLDTPS*HLLEYQNTVL*CNPHRRTLSDNWNTKQDSTIRFFGNNGTSS 366

HSP 2 
Score: 248.958 bits (537), Expect = 4.09941e-66
Identity = 106/113 (93.81%), Postives = 107/113 (94.69%), Query Frame = 1
Query:  331 LLDMNFGSFLPICYCLCFKLNTPVVVHSF*YRKKHTDQIMETQYFFGVIFLP*RILTFSVFRLIS*TILTGASSTTDWTRHLNIFLSIKIPFFDAIRTEELFLTTGTRDKTQR 669
            LLDMN GSFLPIC CLCFKLNTPVVVHSF*YRKKHTDQIME  YFF  IFLP*RILTFSVFRLIS*TILTGASSTTDWTRHLNIFLSIKIPFFDAIRTEELFLTTGTR+KTQR
Sbjct:   33 LLDMNVGSFLPICICLCFKLNTPVVVHSF*YRKKHTDQIMEA*YFFNFIFLP*RILTFSVFRLIS*TILTGASSTTDWTRHLNIFLSIKIPFFDAIRTEELFLTTGTRNKTQR 371

HSP 3 
Score: 246.667 bits (532), Expect = 2.00629e-65
Identity = 98/103 (95.15%), Postives = 100/103 (97.09%), Query Frame = -3
Query:  331 QKEFFCADCIKERYFDTQEDVKMACPVCRGTCTCKDCSANQSKDRESKDSLGEENNAEKILRFHYLICMLLPVLKRMNHDRSVELETEAITNGKKTSEVHIKE 639
            QKEFFCADCIKERYFDTQEDVKMACPVCRGTCTCKDCSANQSKDRESKDSLGEEN  EKILRFHYLICMLLPVLKRMNHDRSVELETEA TNGKKTS+VHIK+
Sbjct:   63 QKEFFCADCIKERYFDTQEDVKMACPVCRGTCTCKDCSANQSKDRESKDSLGEENKVEKILRFHYLICMLLPVLKRMNHDRSVELETEANTNGKKTSDVHIKQ 371

HSP 4 
Score: 135.322 bits (289), Expect = 2.40008e-54
Identity = 59/63 (93.65%), Postives = 61/63 (96.83%), Query Frame = -2
Query:  506 VPLVSKKRLVESCLVFQLSERVLLCGLHQRTVF*YSRRC*DGVSSLSWNLHL*GLFS*SI*RQ 694
            VPL+ KKR+VESC VFQLSERVLLCGLHQRTVF*YSRRC*DGVSSLSWNLHL*GLFS*SI*RQ
Sbjct:    8 VPLLPKKRIVESCFVFQLSERVLLCGLHQRTVF*YSRRC*DGVSSLSWNLHL*GLFS*SI*RQ 196

HSP 5 
Score: 95.9165 bits (203), Expect = 2.40008e-54
Identity = 38/43 (88.37%), Postives = 38/43 (88.37%), Query Frame = -2
Query:  335 NTAFPLFDLYASSCIKTNEPRPEC*A*NRGNNKWEENFRSSYQ 463
            NT  PLFDLYASSCIKTNEPRPEC*A*NRG  KWEENFR SYQ
Sbjct:  239 NTTLPLFDLYASSCIKTNEPRPEC*A*NRGKYKWEENFRRSYQ 367

HSP 6 
Score: 119.743 bits (255), Expect = 3.38391e-51
Identity = 51/54 (94.44%), Postives = 52/54 (96.30%), Query Frame = 2
Query:  539 QVQVPRQTGHAILTSS*VSKYRSLMQSAQKNSF*QLEHETRLNEPLLRHQWHLL 700
            QVQVPRQTGHAILTSS*VSKYRSLMQSAQKNSF*QLEHETRLN+PL R QWHLL
Sbjct:    2 QVQVPRQTGHAILTSS*VSKYRSLMQSAQKNSF*QLEHETRLNDPLFRQQWHLL 163

HSP 7 
Score: 100.957 bits (214), Expect = 3.38391e-51
Identity = 44/45 (97.78%), Postives = 44/45 (97.78%), Query Frame = 2
Query:  335 LI*TSEVFFPFVIASVSSSTLRSWFIRFNTGRSIQIK*WKRSIFS 469
            LI*TSEVFFPFV ASVSSSTLRSWFIRFNTGRSIQIK*WKRSIFS
Sbjct:  233 LI*TSEVFFPFVFASVSSSTLRSWFIRFNTGRSIQIK*WKRSIFS 367

HSP 8 
Score: 188.016 bits (404), Expect = 9.07845e-48
Identity = 88/94 (93.62%), Postives = 88/94 (93.62%), Query Frame = -1
Query:  336 IASKNGILILKKMLRWRVQSVVELAPVRIVQLINLKTEKVRIL*GRKITPKKYCVSII*SVCFFLY*NE*TTTGVLSLKQRQ*QMGRKLPKFIS 617
            IASKNGILILKKMLRWRVQSVVELAPVRIVQLINLKTEKVRIL*GRKI  KKY  SII*SVCFFLY*NE*TTTGVLSLKQRQ QMGRKLP FIS
Sbjct:   85 IASKNGILILKKMLRWRVQSVVELAPVRIVQLINLKTEKVRIL*GRKIKLKKYYASII*SVCFFLY*NE*TTTGVLSLKQRQIQMGRKLPTFIS 366

Oall_contig21396_v21.42538e-4695.83%
Oall_contig21396_v2
HSP 1 
Score: 172.896 bits (371), Expect = 1.42538e-46
Identity = 69/72 (95.83%), Postives = 69/72 (95.83%), Query Frame = -3
Query:  715 LTRQLPNGVMAISPVPSPSPRNFNNVDGNCDVKVGVENGVARRRCFRSKNIEPLPFGTMQLMPCGRNVAESR 930
            LTRQLPNGVMAISPVPSPSPRNFNN DGNCDVKVGVENGV RRRCFRSKNIEPLPFGTMQLMPCGRNVA SR
Sbjct:    2 LTRQLPNGVMAISPVPSPSPRNFNNADGNCDVKVGVENGVVRRRCFRSKNIEPLPFGTMQLMPCGRNVAXSR 217

HSP 2 
Score: 32.2255 bits (64), Expect = 1.42538e-46
Identity = 13/17 (76.47%), Postives = 14/17 (82.35%), Query Frame = -3
Query:  973 SEFSSVKMKKNMKTKQN 1023
            S+F  VK KKNMKTKQN
Sbjct:  269 SDFPLVKKKKNMKTKQN 319

HSP 3 
Score: 162.357 bits (348), Expect = 1.63483e-41
Identity = 71/78 (91.03%), Postives = 71/78 (91.03%), Query Frame = 3
Query:  714 SLIPPHSDHKA*AALCRTAKARCSWTGNTAAWPLRSPLLLSHRNFHLHC*NSAAKATAPAISP*LRSAIVSSTLLLPL 947
            SL PPHSDHKA*AALCRT KARCSWTGNTAA PLRSPL LSHRNFHLHC*NSAAKAT PAISP LRSAIVSSTLLL L
Sbjct:    1 SLXPPHSDHKA*AALCRTVKARCSWTGNTAA*PLRSPLPLSHRNFHLHC*NSAAKATVPAISPLLRSAIVSSTLLLLL 234

HSP 4 
Score: 25.8106 bits (50), Expect = 1.63483e-41
Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = 3
Query:  933 LLLPLRCCPPIQ 968
            LLLPLR CP IQ
Sbjct:  229 LLLPLRYCPXIQ 264

HSP 5 
Score: 146.778 bits (314), Expect = 2.35569e-35
Identity = 61/66 (92.42%), Postives = 61/66 (92.42%), Query Frame = -2
Query:  734 VDETIAERSYGDIAGAVAFAAEFQQCRWKLRCESRSGERSGQAAVFPVQEHRAFAVRHNAAHALWS 931
            VDETIAERS GDIAG VAFAAEFQQCRWKLRCES SGERSG AAVFPVQEHRAF VRHNAAHALWS
Sbjct:   21 VDETIAERSNGDIAGTVAFAAEFQQCRWKLRCESGSGERSG*AAVFPVQEHRAFTVRHNAAHALWS 218

HSP 6 
Score: 128.449 bits (274), Expect = 7.75351e-30
Identity = 54/71 (76.06%), Postives = 54/71 (76.06%), Query Frame = 2
Query:  716 LDSATFRPQGMSCIVPNGKGSMFLDRKHRRLAXXXXXXXXXXXXXXXLLKFRGEGDGTGDIAITPFGNCLV 928
            LD ATFRPQGMSCIVPNGKGSMFLDRKHRRL                LLKFRGEGDGTGDIAITPFGNCLV
Sbjct:    3 LDXATFRPQGMSCIVPNGKGSMFLDRKHRRLTTPFSTPTFTSQFPSALLKFRGEGDGTGDIAITPFGNCLV 215

HSP 7 
Score: 123.409 bits (263), Expect = 2.5514e-28
Identity = 53/69 (76.81%), Postives = 54/69 (78.26%), Query Frame = 1
Query:  724 RHIPTTRHELHCAERQRLDVLGPETPPPGHSVLHSYFHIAISIYIVEIPXXXXXXXXXXXNSVRQLSRQ 930
            RHIPTTRHELHCAER RLDVLGPETPPP HSVLHS+FHIAISI IVEIP            SVRQLSRQ
Sbjct:   11 RHIPTTRHELHCAER*RLDVLGPETPPPNHSVLHSHFHIAISICIVEIPRRRRRYRRYRHYSVRQLSRQ 217

HSP 8 
Score: 123.409 bits (263), Expect = 2.5514e-28
Identity = 54/69 (78.26%), Postives = 54/69 (78.26%), Query Frame = -1
Query:  717 DNCRTELWXXXXXXXXXRGISTM*MEIAM*K*EWRTEWPGGGVSGPRTSSLCRSAQCSSCLVVGMWRNQ 923
            DNCRTE W         RGISTM MEIAM*K EWRTEW GGGVSGPRTSSL RSAQCSSCLVVGMWR Q
Sbjct:    4 DNCRTE*WRYRRYRRLRRGISTMQMEIAM*KWEWRTEWLGGGVSGPRTSSLYRSAQCSSCLVVGMWRXQ 210

Oall_contig14469_v27.39742e-4590.00%
Oall_contig14469_v2
HSP 1 
Score: 123.867 bits (264), Expect = 7.39742e-45
Identity = 45/50 (90.00%), Postives = 48/50 (96.00%), Query Frame = -3
Query:  145 NCKTSIVDLHRSCPNCSYNLCLGCCKDFCRGSFTGRIDTFISKNSNGRKA 294
            NCKTSIVDLHRSCPNCSYNLCL CCKDFC GSFTGRIDTFISKNSNG+++
Sbjct:   98 NCKTSIVDLHRSCPNCSYNLCLSCCKDFCXGSFTGRIDTFISKNSNGKES 247

HSP 2 
Score: 75.2971 bits (158), Expect = 7.39742e-45
Identity = 29/31 (93.55%), Postives = 31/31 (100.00%), Query Frame = -3
Query:  301 VELETEAITNGKKTSEVHIKESEFGCNEQNC 393
            VELETEAITNGK+TSEVHIK+SEFGCNEQNC
Sbjct:    1 VELETEAITNGKRTSEVHIKQSEFGCNEQNC 93

HSP 3 
Score: 116.994 bits (249), Expect = 4.98e-41
Identity = 46/48 (95.83%), Postives = 46/48 (95.83%), Query Frame = 3
Query:  153 FHLSSLK*MCQFFQ*SSHDKNPYNNLNRDYMNNLDSFYGDPQ*KFCSY 296
            FHLSSLK*MCQFF *SSHDKNPYNNLNRDYMNNLDSFYGDPQ KFCSY
Sbjct:   96 FHLSSLK*MCQFFX*SSHDKNPYNNLNRDYMNNLDSFYGDPQLKFCSY 239

HSP 4 
Score: 69.3404 bits (145), Expect = 4.98e-41
Identity = 29/31 (93.55%), Postives = 29/31 (93.55%), Query Frame = 3
Query:  300 SNFAHCSQIQTP*YELRKFSSHLLLPLFQAQ 392
            SNFAHCS IQT *YELRKFSSHLLLPLFQAQ
Sbjct:    2 SNFAHCSXIQTA*YELRKFSSHLLLPLFQAQ 94

HSP 5 
Score: 106.914 bits (227), Expect = 4.56081e-37
Identity = 46/55 (83.64%), Postives = 48/55 (87.27%), Query Frame = 2
Query:  131 HRDIQAFLPFEFFEINVSILPVKLPRQKSLQQPKQRLYEQFGQLLWRSTIEVLQL 295
            H+  +   PFEFFEINVSILPVKLP QKSLQQ KQRLYEQFGQLLWRSTIEVLQL
Sbjct:   97 HQIYKLSFPFEFFEINVSILPVKLPXQKSLQQLKQRLYEQFGQLLWRSTIEVLQL 261

HSP 6 
Score: 66.1329 bits (138), Expect = 4.56081e-37
Identity = 29/31 (93.55%), Postives = 29/31 (93.55%), Query Frame = 2
Query:  299 QQFCSLQPNSDSLI*TSEVFFPFVIASVSSS 391
            QQFCSLQPNSD LI*TSEV FPFVIASVSSS
Sbjct:    3 QQFCSLQPNSDCLI*TSEVLFPFVIASVSSS 95

HSP 7 
Score: 61.0927 bits (127), Expect = 1.93278e-21
Identity = 28/31 (90.32%), Postives = 29/31 (93.55%), Query Frame = -1
Query:  300 LSLKQRQ*QMGRKLPKFISRSLNLAAMSKIA 392
            LSLKQRQ*QMGR+LPKFIS SLN AAMSKIA
Sbjct:    2 LSLKQRQ*QMGRELPKFISSSLNXAAMSKIA 94

HSP 8 
Score: 49.1792 bits (101), Expect = 1.93278e-21
Identity = 18/21 (85.71%), Postives = 18/21 (85.71%), Query Frame = -2
Query:  143 WELHWKN*HIYFKELKWKESL 205
            WELH KN*HIYFKELKWK  L
Sbjct:  187 WELHXKN*HIYFKELKWKGKL 249

HSP 9 
Score: 28.1016 bits (55), Expect = 1.93278e-21
Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = -1
Query:  258 ITAKLLLWISIEA 296
            +TAKL LWISIEA
Sbjct:   96 VTAKLQLWISIEA 134

HSP 10 
Score: 59.718 bits (124), Expect = 6.64384e-17
Identity = 22/23 (95.65%), Postives = 22/23 (95.65%), Query Frame = 1
Query:  325 FRLLDMNFGSFLPICYCLCFKLN 393
            FRLLDMNFGS LPICYCLCFKLN
Sbjct:    1 FRLLDMNFGSSLPICYCLCFKLN 69

HSP 11 
Score: 40.9315 bits (83), Expect = 6.64384e-17
Identity = 19/25 (76.00%), Postives = 20/25 (80.00%), Query Frame = 1
Query:  130 SPGYTSFPSI*VL*NKCVNSSSEAP 204
            SP   +F SI*VL*NKCVNSS EAP
Sbjct:  188 SPDIQAFLSI*VL*NKCVNSSXEAP 262

HSP 12 
Score: 22.1449 bits (42), Expect = 6.64384e-17
Identity = 9/10 (90.00%), Postives = 9/10 (90.00%), Query Frame = 1
Query:  259 ASMEIHNRSF 288
            ASMEIHN SF
Sbjct:  104 ASMEIHN*SF 133

HSP 13 
Score: 51.9285 bits (107), Expect = 4.16746e-16
Identity = 22/23 (95.65%), Postives = 22/23 (95.65%), Query Frame = -2
Query:  323 *A*NRGNNKWEENFRSSYQGV*I 391
            *A*NRGNNKWEENFRSSYQ V*I
Sbjct:    3 *A*NRGNNKWEENFRSSYQAV*I 71

HSP 14 
Score: 45.9718 bits (94), Expect = 4.16746e-16
Identity = 19/31 (61.29%), Postives = 24/31 (77.42%), Query Frame = -1
Query:  111 GASLEELTHLFQRTQMEGKLVYPGDEQLSLK 203
            GAS EELTHLFQRTQME K    G+++ +L+
Sbjct:  189 GASXEELTHLFQRTQMERKACISGEQRQTLQ 281

HSP 15 
Score: 22.1449 bits (42), Expect = 4.16746e-16
Identity = 8/9 (88.89%), Postives = 8/9 (88.89%), Query Frame = -2
Query:  260 NFYCGSP*K 286
            NF CGSP*K
Sbjct:  106 NFNCGSP*K 132

Oall_contig17518_v29.84411e-2195.56%
Oall_contig17518_v2
HSP 1 
Score: 98.2075 bits (208), Expect = 9.84411e-21
Identity = 43/45 (95.56%), Postives = 45/45 (100.00%), Query Frame = -3
Query: 1066 KVKKPSRVSGSEAALLDETLRKMRSKKKGNLQLELIRMVLKRDLE 1200
            KVKKP+RVSGSEAALLDETLRKM+SKKKGNLQLELIRMVLKRDLE
Sbjct:  153 KVKKPARVSGSEAALLDETLRKMKSKKKGNLQLELIRMVLKRDLE 287

HSP 2 
Score: 76.6717 bits (161), Expect = 2.99295e-14
Identity = 33/44 (75.00%), Postives = 33/44 (75.00%), Query Frame = 1
Query: 1069 QVSLEHHSDQLQLQIPFLLRPHLPQCLVQQXXXXXXXXXXFLHL 1200
            QVSLEHHSDQLQLQIPFLLR HLPQCLVQQ          FLHL
Sbjct:  153 QVSLEHHSDQLQLQIPFLLRLHLPQCLVQQRRLRARNPRRFLHL 284

HSP 3 
Score: 75.7553 bits (159), Expect = 5.64895e-14
Identity = 30/32 (93.75%), Postives = 30/32 (93.75%), Query Frame = 2
Query: 1106 CKFPFFFDLIFRNVSSSNAASEPETLDGFFTF 1201
            CKFPFFFD IFRNVSSSNAASEPETL GFFTF
Sbjct:  152 CKFPFFFDFIFRNVSSSNAASEPETLAGFFTF 247

Blast Hits to Populus Trichocarpa Proteins

Analysis Date: 11-17-2009 (Blast: CC454_contigs_v2_vs_PopulusProt_JamboreeModels1_1)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
fgenesh4_pg.C_LG_XI0003455.93762e-8446.00%
jgi|Poptr1_1|771192|fgenesh4_pg.C_LG_XI000345
HSP 1 
Score: 308.145 bits (788), Expect = 5.93762e-84
Identity = 161/350 (46.00%), Postives = 212/350 (60.57%), Query Frame = -3
Query:  142 RVSGSEAALLDETLRKMRSKKKGNLQLELIRMVLKRDLEXXXXXXXXXXXXXKSEFSSVKMKKNMKTKQNXXXXXXXXXXXXXELTRQLPNGVMAISPVPSPSPRNFNNVDGNCDVKVG--VENGVAR-RRCFRSKNIEPLPFGTMQLMPCGRNVAESRRGKRKRRCHWXXXXXXXXXXXXXXCQKEFFCADCIKERYFDTQEDVKMACPVCRGTCTCKDCSANQSKDRESKDSLGEENNAEKILRFHYLICMLLPVLKRMNHDRSVELETEAITNGKKTSEVHIKESEFGCNEQNCCNNCKTSIVDLHRSCPNCSYNLCLGCCKDFCRGSFTGRIDTFISKNSNGRKAC 1182
            RVS  E  L  +  +K +  K+G+LQL+LIRMVL++++E                          K+K+              EL R LPNG MAISP  S    N      +CD+K+G  V NG +  RRCFRSKN+EP+P G +Q++P  R+    R+GKRK+ CHW               +KE++C DCIKE+Y +TQE+V+  CP+CRGTC+CK CSA Q +D   KD   E++  + +L FHYLICMLLP+LK++N D+S+ELE EA   G+K SEV I+++E  CN+Q CCNNCKTSIVD HRSCP CSYNLCL CC+D   G   G + T + K  NGRKAC
Sbjct:   73 RVSSKEGKL-GKFKKKGKKLKRGDLQLDLIRMVLQKEME------------------------KRKSKKRKSFSEKSEEGEGEELMRNLPNGFMAISPAKSFGNGNVGCSSSHCDIKIGGDVFNGASTARRCFRSKNVEPMPIGKLQVLPYKRDGVRLRKGKRKK-CHWCRSSTRTLIRCSSC-RKEYYCLDCIKEQYLETQEEVRRECPMCRGTCSCKVCSAIQCRDIACKDLSKEKSEVDNVLHFHYLICMLLPILKQINQDQSIELEIEAKIKGQKPSEVQIQQAEVSCNKQCCCNNCKTSIVDFHRSCPECSYNLCLSCCRDIFHGGVHGGVKTLLCKCPNGRKAC 395

gw1.IV.2179.11.06227e-5754.01%
jgi|Poptr1_1|197090|gw1.IV.2179.1
HSP 1 
Score: 215.312 bits (547), Expect = 1.06227e-57
Identity = 101/187 (54.01%), Postives = 127/187 (67.91%), Query Frame = -3
Query:  136 CHWXXXXXXXXXXXXXXCQKEFFCADCIKERYFDTQEDVKMACPVCRGTCTCKDCSANQSKDRESKDSLGEENNAEKILRFHYLICMLLPVLKRMNHDRSVELETEAITNGK-KTSEVHIKESEFGCNEQNCCNNCKTSIVDLHRSCPNCSYNLCLGCCKDFCRGSFTGRIDTFISKNSNGRKACIS 693
            CHW               +KEF+C  CIKE+Y +TQEDV+M CPVCR TC+CK CSA Q +D E K    E +  +K+L FHYLICMLLP+LK++N D+SVE+E EA   G  K +EV I+++E  CN+Q CCNNCK SIVD HR+CP+CSY+LCL CC+D   GS  G +   + K  NGRKACIS
Sbjct:    1 CHWCRSGSRTLIRCLSC-RKEFYCLCCIKEQYLETQEDVRMKCPVCRRTCSCKACSAIQCRDIECK----ERSKVDKVLHFHYLICMLLPILKQINQDQSVEIEIEAKIKGSLKPTEVQIQQAEISCNKQCCCNNCKASIVDFHRTCPDCSYSLCLSCCQDIFHGSLHGSVKGLLCKCPNGRKACIS 182

HSP 2 
Score: 24.6386 bits (52), Expect = 1.06227e-57
Identity = 9/15 (60.00%), Postives = 10/15 (66.67%), Query Frame = -2
Query:    2 ACNANGRISCPPAEF 46
            A + NG I CPP EF
Sbjct:  214 AAHCNGSIPCPPREF 228

gw1.166.62.14.71844e-2838.67%
jgi|Poptr1_1|274566|gw1.166.62.1
HSP 1 
Score: 116.701 bits (291), Expect = 4.71844e-28
Identity = 58/150 (38.67%), Postives = 86/150 (57.33%), Query Frame = -3
Query:  181 FCADCIKERYFD-TQEDVKMACPVCRGTCTCKDCSANQSKDRESKDSLGEENNAEKILRFHYLICMLLPVLKRMNHDRSVELETEAITNGKKTSEVHIKESEFGCNEQNCCNNCKTSIVDLHRSCPNCSYNLCLGCCKDFCRGSFTGRID 627
            +C  CIK+ Y + T+      CP CR  C C  C  +    + SK  +    N+EK+   HYLI +LLP L+++  +++ E++ EA   G   S   I E+    +E+  CN+C TSI+D HRSCPNCSY LCL CC++  +GS + R +
Sbjct:   22 YCIQCIKQWYPEMTEGHFAKRCPFCRKKCNCNVCLHSSGLIKTSKRDI---TNSEKVQHLHYLIKLLLPFLEQICDEQTEEMQIEAGIRGILCSPFDIAENFCYSDERVYCNHCTTSIIDFHRSCPNCSYELCLSCCREIRKGSLSRRAE 168

HSP 2 
Score: 23.8682 bits (50), Expect = 4.71844e-28
Identity = 11/19 (57.89%), Postives = 12/19 (63.16%), Query Frame = -2
Query:    5 VSDWKACNANGRISCPPAE 61
            V  W A N +G ISCPP E
Sbjct:  202 VLSWNA-NEDGSISCPPNE 219

eugene3.013300193.3114e-2630.41%
jgi|Poptr1_1|581863|eugene3.01330019
HSP 1 
Score: 116.316 bits (290), Expect = 3.3114e-26
Identity = 66/217 (30.41%), Postives = 105/217 (48.39%), Query Frame = -3
Query:  148 SKNIEPLPFGTMQLMPCGRNVAESRRGKRKRRCHWXXXXXXXXXXXXXXCQKEFFCADCIKERYFDTQ-EDVKMACPVCRGTCTCKDCSANQSKDRESKDSLGEENNAEKILRFHYLICMLLPVLKRMNHDRSVELETEAITNGKKTS--EVHIKESEFGCNEQNCCNNCKTSIVDLHRSCPNCSYNLCLGCCKDFCRGSFTGRIDTFISKNSNGRK 789
            SK+I    F    +        +S      + CH               C K  FC +CI E Y D   E+++  CP CRG C C+ C      D   K  + E    +K+   H L+  +LP++K+++H++  E+E E    G  +S  ++ +  ++   +EQ CCN C+  I+D HR C NCSY+LCL CC+D  RG+    + T +++N   R+
Sbjct:  176 SKSISQRSFDASAMTEYSDASTDSSEDIGGQTCHQCRRNDRNRVIWCPRCDKRGFCDNCISEWYSDIPLEEIEKVCPACRGICNCRSCLRG---DNMVKVRIREIPVLDKLQYLHCLLSSVLPIVKQIHHEQCFEVELEQRLCGITSSGTDIDLVRAKLNADEQMCCNICRIPIIDYHRHCANCSYDLCLHCCQDL-RGASKHGVGTEVNENQIDRR 388

gw1.V.3035.11.25833e-2534.34%
jgi|Poptr1_1|207634|gw1.V.3035.1
HSP 1 
Score: 114.39 bits (285), Expect = 1.25833e-25
Identity = 57/166 (34.34%), Postives = 95/166 (57.23%), Query Frame = -3
Query:  145 QKEFFCADCIKERYFD-TQEDVKMACPVCRGTCTCKDCSANQSKDRESKDSLGEENNAEKILRFHYLICMLLPVLKRMNHDRSVELETEAITNGKKTSEVHIKESEFGCNEQNCCNNCKTSIVDLHRSCPNCSYNLCLGCCKDFCRGSFTGRIDTFISKNSNGRKA 639
            +++ +C  C+ + Y   T++D+  ACPVC G C CK C    +  ++ K+   E +  E++    +L+C LLP LKR++ ++  E E EA   G   +++ I+ +    +E+  C+NC+TSI D HRSC NCS +LCL CC++      TG     +S++  G K+
Sbjct:   20 KRKRYCIPCLTKWYPKMTEDDIASACPVCLGNCNCKSCLRLDAPVKDLKNLNLEVSEEEEVQHSKFLLCSLLPFLKRLDAEQMTEREIEARIRGVPPADLQIENASCPADERMFCDNCRTSIFDYHRSCSNCSSDLCLLCCREI-HELLTGSPKKTVSEDFIGPKS 184

gw1.XI.1448.17.54929e-2536.60%
jgi|Poptr1_1|233468|gw1.XI.1448.1
HSP 1 
Score: 105.916 bits (263), Expect = 7.54929e-25
Identity = 56/153 (36.60%), Postives = 82/153 (53.59%), Query Frame = -3
Query:  181 KEFFCADCIKERYFD-TQEDVKMACPVCRGTCTCKDCSANQSKDRESKDSLGEENNAEKILRFHYLICMLLPVLKRMNHDRSVELETEAITNGKKTSEVHIKESEFGCNEQNCCNNCKTSIVDLHRSCPNCSYNLCLGCCKDFCRGSFTGRID 636
            +  +C  CIK+ Y + T+      CP C   C C  C  +    + SK ++    N EK+   HYLI  LLP L+++  +++ E++ EA   G     V I E+    NE+  CN C TSIVD HRSC  C+Y LCL CC++  +GS + R +
Sbjct:   20 ERMYCIQCIKQWYPEMTEGQFAEQCPFCCKKCNCNVCLHSSGLIKTSKRNI---TNHEKVRHLHYLIKSLLPFLEQICDEQTEEVQIEAGIGGILYFPVDIAENFCYSNERVYCNYCATSIVDFHRSCRKCAYELCLSCCREIRKGSLSSRAE 169

HSP 2 
Score: 23.8682 bits (50), Expect = 7.54929e-25
Identity = 12/33 (36.36%), Postives = 17/33 (51.52%), Query Frame = -2
Query:    5 PSKITGTFLSSSASVSDWKACNANGRISCPPAE 103
            P +    +  S + V  W A + +G ISCPP E
Sbjct:  189 PCQYQNPYDHSESLVLPWNA-SEDGSISCPPQE 220

eugene3.001301744.04792e-2433.96%
jgi|Poptr1_1|570810|eugene3.00130174
HSP 1 
Score: 109.383 bits (272), Expect = 4.04792e-24
Identity = 54/159 (33.96%), Postives = 86/159 (54.09%), Query Frame = -3
Query:  163 KEFFCADCIKERYFDTQ-EDVKMACPVCRGTCTCKDCSANQSKDRESKDSLGEENNAEKILRFHYLICMLLPVLKRMNHDRSVELETEAITNGKKTSEVHIKESEFGCNEQNCCNNCKTSIVDLHRSCPNCSYNLCLGCCKDFCRGSFTGRIDTFISKN 636
            K  FC  CI E Y D   E+++  CP CRG C C+ C      D   K  + E    +K+   H L+  +LP++K+++ ++  E+E E    G   +++ +  ++   +EQ CCN C+  I+D HR C NCSY+LCL CC+D  RG+    ++  +  N
Sbjct:  222 KRGFCDSCISEWYSDIPLEEIEKVCPACRGICNCRGCLRG---DNMVKVRIREIPVLDKLQYLHCLLSSVLPIVKQIHQEQCFEVELEQRLRG---TDIDLVRAKLNADEQMCCNICRIPIIDYHRHCANCSYDLCLHCCQDL-RGASKHGVENEVDDN 373

gw1.V.3284.12.90093e-2232.93%
jgi|Poptr1_1|207883|gw1.V.3284.1
HSP 1 
Score: 103.219 bits (256), Expect = 2.90093e-22
Identity = 55/167 (32.93%), Postives = 93/167 (55.69%), Query Frame = -3
Query:  145 QKEFFCADCIKERYFD-TQEDVKMACPVCRGTCTCKDCSANQSKDRESKDSLGEENNAEKILRFH-YLICMLLPVLKRMNHDRSVELETEAITNGKKTSEVHIKESEFGCNEQNCCNNCKTSIVDLHRSCPNCSYNLCLGCCKDFCRGSFTGRIDTFISKNSNGRKA 639
            +++ +C  C+ + Y   T++++  ACPVC G C CK C           D+  +  + E+++R+  + +  LLP LK+++ ++ +E E EA   G   + + I+ +E   +E+  C+NC+TSI D HRSC NCS +LCL CC++   G   G      SK+  G K+
Sbjct:   20 KRKRYCIPCLTKWYPKMTEDEIANACPVCLGNCNCKSCLR--------LDAPIKVLSKEEVVRYSKFFLRALLPFLKQLDEEQMMEREIEARREGVPLAGLQIENAECPADERMFCDNCRTSIFDYHRSCSNCSSDLCLACCREIRAGHLQGGGPDTESKDFMGPKS 178

fgenesh4_pg.C_LG_XV0001252.71519e-2035.16%
jgi|Poptr1_1|775697|fgenesh4_pg.C_LG_XV000125
HSP 1 
Score: 96.6709 bits (239), Expect = 2.71519e-20
Identity = 45/128 (35.16%), Postives = 73/128 (57.03%), Query Frame = -3
Query:  214 TQEDVKMACPVCRGTCTCKDCSANQSKDRESKDSLGEENNAEKILRFHYLICMLLPVLKRMNHDRSVELETEAITNGKKTSEVHIKESEFGCNEQNCCNNCKTSIVDLHRSCPN--CSYNLCLGCCKD 591
            T E++++ACP CRG C C+ C           D        +K+L   YL+   LP+L+ +  +++ E+  ++  +G   +E H+ +S    +++  C+NC TSIV+ HRSCPN  CSY+LCL CC +
Sbjct:    8 THEEIEIACPFCRGNCNCRVCLKEDVVVVAGDDKADANAKLQKLL---YLLHKTLPLLRHIQREQNSEIYVDSRIHGSLLTEEHVTKSLLDDDDRVYCDNCSTSIVNFHRSCPNPDCSYDLCLTCCSE 132

Blast Hits to Contig V2 RO454

Analysis Date: 11-17-2009 (Blast: CC454_contigs_v2_vs_RO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
RO454_contig14732_v21.93606e-4395.83%
RO454_contig14732_v2
HSP 1 
Score: 172.896 bits (371), Expect = 1.93606e-43
Identity = 69/72 (95.83%), Postives = 69/72 (95.83%), Query Frame = -3
Query:  715 LTRQLPNGVMAISPVPSPSPRNFNNVDGNCDVKVGVENGVARRRCFRSKNIEPLPFGTMQLMPCGRNVAESR 930
            LTRQLPNGVMAISPVPSPSPRNFNN DGNCDVKVGVENGV RRRCFRSKNIEPLPFGTMQLMPCGRNVA SR
Sbjct:    2 LTRQLPNGVMAISPVPSPSPRNFNNADGNCDVKVGVENGVVRRRCFRSKNIEPLPFGTMQLMPCGRNVAXSR 217

HSP 2 
Score: 162.357 bits (348), Expect = 1.39704e-41
Identity = 71/78 (91.03%), Postives = 71/78 (91.03%), Query Frame = 3
Query:  714 SLIPPHSDHKA*AALCRTAKARCSWTGNTAAWPLRSPLLLSHRNFHLHC*NSAAKATAPAISP*LRSAIVSSTLLLPL 947
            SL PPHSDHKA*AALCRT KARCSWTGNTAA PLRSPL LSHRNFHLHC*NSAAKAT PAISP LRSAIVSSTLLL L
Sbjct:    1 SLXPPHSDHKA*AALCRTVKARCSWTGNTAA*PLRSPLPLSHRNFHLHC*NSAAKATVPAISPLLRSAIVSSTLLLLL 234

HSP 3 
Score: 24.8942 bits (48), Expect = 1.39704e-41
Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = 3
Query:  933 LLLPLRCCPPIQ 968
            LLLPLR CP IQ
Sbjct:  229 LLLPLRYCPLIQ 264

HSP 4 
Score: 146.778 bits (314), Expect = 1.4099e-35
Identity = 61/66 (92.42%), Postives = 61/66 (92.42%), Query Frame = -2
Query:  734 VDETIAERSYGDIAGAVAFAAEFQQCRWKLRCESRSGERSGQAAVFPVQEHRAFAVRHNAAHALWS 931
            VDETIAERS GDIAG VAFAAEFQQCRWKLRCES SGERSG AAVFPVQEHRAF VRHNAAHALWS
Sbjct:   21 VDETIAERSNGDIAGTVAFAAEFQQCRWKLRCESGSGERSG*AAVFPVQEHRAFTVRHNAAHALWS 218

HSP 5 
Score: 128.449 bits (274), Expect = 4.64053e-30
Identity = 54/71 (76.06%), Postives = 54/71 (76.06%), Query Frame = 2
Query:  716 LDSATFRPQGMSCIVPNGKGSMFLDRKHRRLAXXXXXXXXXXXXXXXLLKFRGEGDGTGDIAITPFGNCLV 928
            LD ATFRPQGMSCIVPNGKGSMFLDRKHRRL                LLKFRGEGDGTGDIAITPFGNCLV
Sbjct:    3 LDXATFRPQGMSCIVPNGKGSMFLDRKHRRLTTPFSTPTFTSQFPSALLKFRGEGDGTGDIAITPFGNCLV 215

HSP 6 
Score: 123.409 bits (263), Expect = 1.52703e-28
Identity = 53/69 (76.81%), Postives = 54/69 (78.26%), Query Frame = 1
Query:  724 RHIPTTRHELHCAERQRLDVLGPETPPPGHSVLHSYFHIAISIYIVEIPXXXXXXXXXXXNSVRQLSRQ 930
            RHIPTTRHELHCAER RLDVLGPETPPP HSVLHS+FHIAISI IVEIP            SVRQLSRQ
Sbjct:   11 RHIPTTRHELHCAER*RLDVLGPETPPPNHSVLHSHFHIAISICIVEIPRRRRRYRRYRHYSVRQLSRQ 217

HSP 7 
Score: 123.409 bits (263), Expect = 1.52703e-28
Identity = 54/69 (78.26%), Postives = 54/69 (78.26%), Query Frame = -1
Query:  717 DNCRTELWXXXXXXXXXRGISTM*MEIAM*K*EWRTEWPGGGVSGPRTSSLCRSAQCSSCLVVGMWRNQ 923
            DNCRTE W         RGISTM MEIAM*K EWRTEW GGGVSGPRTSSL RSAQCSSCLVVGMWR Q
Sbjct:    4 DNCRTE*WRYRRYRRLRRGISTMQMEIAM*KWEWRTEWLGGGVSGPRTSSLYRSAQCSSCLVVGMWRXQ 210

RO454_contig22903_v25.89177e-2195.56%
RO454_contig22903_v2
HSP 1 
Score: 98.2075 bits (208), Expect = 5.89177e-21
Identity = 43/45 (95.56%), Postives = 45/45 (100.00%), Query Frame = -3
Query: 1066 KVKKPSRVSGSEAALLDETLRKMRSKKKGNLQLELIRMVLKRDLE 1200
            KVKKP+RVSGSEAALLDETLRKM+SKKKGNLQLELIRMVLKRDLE
Sbjct:  271 KVKKPARVSGSEAALLDETLRKMKSKKKGNLQLELIRMVLKRDLE 405

HSP 2 
Score: 76.6717 bits (161), Expect = 1.7913e-14
Identity = 33/44 (75.00%), Postives = 33/44 (75.00%), Query Frame = 1
Query: 1069 QVSLEHHSDQLQLQIPFLLRPHLPQCLVQQXXXXXXXXXXFLHL 1200
            QVSLEHHSDQLQLQIPFLLR HLPQCLVQQ          FLHL
Sbjct:  271 QVSLEHHSDQLQLQIPFLLRLHLPQCLVQQRRLRARNPRRFLHL 402

HSP 3 
Score: 75.7553 bits (159), Expect = 3.38094e-14
Identity = 30/32 (93.75%), Postives = 30/32 (93.75%), Query Frame = 2
Query: 1106 CKFPFFFDLIFRNVSSSNAASEPETLDGFFTF 1201
            CKFPFFFD IFRNVSSSNAASEPETL GFFTF
Sbjct:  270 CKFPFFFDFIFRNVSSSNAASEPETLAGFFTF 365

Blast Hits to TAIR7 Peptides

Analysis Date: 11-17-2009 (Blast: CC454_contigs_v2_vs_TAIR7_pep_20070425)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
AT4G21430.1 8.45073e-5639.14%
B160; transcription factor | chr4:11407846-11412170 REVERSE
HSP 1 
Score: 214.542 bits (545), Expect = 8.45073e-56
Identity = 137/350 (39.14%), Postives = 191/350 (54.57%), Query Frame = -3
Query:  145 KPSRVSGSEAALLDETLRKMRSKKKGNLQLELIRMVLKRDLEXXXXXXXXXXXXXKSEFSSVKMKKNMKTKQNXXXXXXXXXXXXXELTRQLPNGVMAISPVPSPSPRNFNNVDGNCDVKVGVENGVARRRCFRSKNIEPLPFGTMQLMPCGRNVAESRRGKRKRRCHWXXXXXXXXXXXXXXCQKEFFCADCIKERYFDTQEDVKMACPVCRGTCTCKDCSANQSKDRESKDSLGEENNAEKILRFHYLICMLLPVLKRMNHDRSVELETEAITNGKKTSEVHIKESEFGCNEQNCCNNCKT-SIVDLHRSCPNCSYNLCLGCCKDFCRGSFTGRIDTFISKNSNGRKA 1191
            K  RV G EA  +DE ++KM+ K+ G+LQL+LIRMVLKR++E                    K K+   +                ELTR LPNG+MAISP PSP+    +NV   CDVKVG E     +R FRSKNIEPLP G MQ++P   ++   R+ K K RCHW              C++EFFC DCI++R   ++E+V+  CPVCRG+C CK CS   S   E KDS    ++ +++L  HY +CMLLPVLK +N +  VE+E +A       +E  I  SE   +++  C+N +  ++VDL R C   S  L L   +D  + S + ++ +   K SNG K+
Sbjct:   88 KRKRVMG-EAEAMDEAVKKMKLKR-GDLQLDLIRMVLKREVE--------------------KRKRLPNSNNKKKSNGGFSEFVGEELTRVLPNGIMAISP-PSPTT---SNVSSPCDVKVGEEPISMIKRRFRSKNIEPLPIGKMQVVPFKGDLVNGRKEK-KMRCHWCGTRGFGDLISCLSCEREFFCIDCIEKRNKGSKEEVEKKCPVCRGSCRCKVCSVTNSGVTECKDSQSVRSDIDRVLHLHYAVCMLLPVLKEINAEHKVEVENDAEKKEGNPAEPQIHSSELTSDDRQPCSNGRDFAVVDLQRMCTRSSSVLRLNSDQDQSQESLSRKVGSV--KCSNGIKS 408

AT1G62310.1 1.07648e-2635.87%
transcription factor jumonji (jmjC) domain-containing protein | chr1:23039704-23042966 REVERSE
HSP 1 
Score: 117.857 bits (294), Expect = 1.07648e-26
Identity = 66/184 (35.87%), Postives = 95/184 (51.63%), Query Frame = -3
Query:  187 RNVAESRRGKRKRRCHWXXXXXXXXXXXXXXCQKEFFCADCIKERYFD-TQEDVKMACPVCRGTCTCKDCSANQSKDRESKDSLGEENNAEKILRFHYLICMLLPVLKRMNHDRSVELETEAITNGKKTSEVHIKESEFGCNEQNCCNNCKTSIVDLHRSCPNCSYNLCLGCCKDFCRGSFTGR 735
            +N   S R +    CH               C+K  FC  CI++ Y + +++DV   CP+CR  C C  C         SK  L +   +E+     YLI ++LP L +++  + +E+E EA   GK  SEV I  +    +E+  C++C TSIVDLHRSCP CSY LCL CC++   GS + R
Sbjct:  195 KNDCTSSRKQSGPICHQCLKGERITLLICSECEKTMFCLQCIRKWYPNLSEDDVVEKCPLCRQNCNCSKCLHLNGLIETSKRELAK---SERRHHLQYLITLMLPFLNKLSIFQKLEIEFEATVQGKLPSEVEITAAISYTDERVYCDHCATSIVDLHRSCPKCSYELCLKCCQEIREGSLSER 375

AT1G11950.1 1.19019e-2540.54%
transcription factor jumonji (jmjC) domain-containing protein | chr1:4034745-4038308 REVERSE
HSP 1 
Score: 114.39 bits (285), Expect = 1.19019e-25
Identity = 60/148 (40.54%), Postives = 80/148 (54.05%), Query Frame = -3
Query:  187 FCADCIKERYFD-TQEDVKMACPVCRGTCTCKDCSANQSKDRESKDSLGEENNAEKILRFHYLICMLLPVLKRMNHDRSVELETEAITNGKKTSEVHIKESEFGCNEQNCCNNCKTSIVDLHRSCPNCSYNLCLGCCKDFCRGSFTGR 627
            +C  CIK+ Y   + +D+   CP CRGTC C  C  +      SK  L   +  E+     +LI  +LP LK++   +  E+ETEA       S+V I ES     E+  CN+C TSIVDLHRSCP CSY LCL CC++   G  + R
Sbjct:  215 YCFPCIKKWYPHLSTDDILEKCPFCRGTCNCCTCLHSSGLIETSKRKL---DKYERFYHLRFLIVAMLPFLKKLCKAQDQEIETEAKVQDSMASQVDISESLCSNEERVFCNHCATSIVDLHRSCPKCSYELCLNCCQEIRGGWLSDR 359

AT4G00990.1 1.11399e-2335.76%
transcription factor jumonji (jmjC) domain-containing protein | chr4:427035-431535 FORWARD
HSP 1 
Score: 107.842 bits (268), Expect = 1.11399e-23
Identity = 59/165 (35.76%), Postives = 90/165 (54.55%), Query Frame = -3
Query:  151 KEFFCADCIKERYFD-TQEDVKMACPVCRGTCTCKDCSANQSKDRESKDSLGEENNAEKILRFHYLICMLLPVLKRMNHDRSVELETEAITNGKKTSEVHIKESEFGCNEQNCCNNCKTSIVDLHRSCP--NCSYNLCLGCCKDFCRGSFTGRIDTFISKNSNGR 636
            K+ +C DCIK  Y + T E+V+ ACP C  TC C+ C       +       E++   K+ +  YL+  +LPVLK +  +++ ELE E+   G   +E +IK  +   +E+  C+ C+TSI + HRSCP  NCS ++CL CCK+   G    R      KN+ G+
Sbjct:  100 KKCYCFDCIKRSYSERTHEEVRAACPFCMMTCICRACLRLPLVIKPPS----EKDTDVKLKQLQYLLVKVLPVLKDIYTEQNRELEIESTIRGHPVTEANIKRCKLDPSERIYCDLCRTSIANFHRSCPNKNCSVDICLSCCKELSEGFHQERDG---KKNAEGK 257

AT1G09060.3 7.22065e-2337.59%
transcription factor | chr1:2921238-2925257 REVERSE
HSP 1 
Score: 105.145 bits (261), Expect = 7.22065e-23
Identity = 53/141 (37.59%), Postives = 81/141 (57.45%), Query Frame = -3
Query:  214 FCADCIKERYFDTQ-EDVKMACPVCRGTCTCKDCSANQSKDRESKDSLGEENNAEKILRFHYLICMLLPVLKRMNHDRSVELETEAITNGKKTSEVHIK--ESEFGCNEQNCCNNCKTSIVDLHRSCPNCSYNLCLGCCKD 627
            FC +C+  RY +   E+V+  CP CRG C CK C  +   D   K  + E    +K+   + L+  +LPV+K+++ ++ +E+E E     K+  EV I    +    +EQ CCN C+  +VD +R CPNCSY+LCL CC+D
Sbjct:  242 FCHNCLSARYSEISLEEVEKVCPACRGLCDCKSCLRS---DNTIKVRIREIPVLDKLQYLYRLLSAVLPVIKQIHLEQCMEVELE-----KRLREVEIDLVRARLKADEQMCCNVCRIPVVDYYRHCPNCSYDLCLRCCQD 374

AT1G09060.2 7.22065e-2337.59%
transcription factor jumonji (jmjC) domain-containing protein | chr1:2921238-2925215 REVERSE
HSP 1 
Score: 105.145 bits (261), Expect = 7.22065e-23
Identity = 53/141 (37.59%), Postives = 81/141 (57.45%), Query Frame = -3
Query:  214 FCADCIKERYFDTQ-EDVKMACPVCRGTCTCKDCSANQSKDRESKDSLGEENNAEKILRFHYLICMLLPVLKRMNHDRSVELETEAITNGKKTSEVHIK--ESEFGCNEQNCCNNCKTSIVDLHRSCPNCSYNLCLGCCKD 627
            FC +C+  RY +   E+V+  CP CRG C CK C  +   D   K  + E    +K+   + L+  +LPV+K+++ ++ +E+E E     K+  EV I    +    +EQ CCN C+  +VD +R CPNCSY+LCL CC+D
Sbjct:  228 FCHNCLSARYSEISLEEVEKVCPACRGLCDCKSCLRS---DNTIKVRIREIPVLDKLQYLYRLLSAVLPVIKQIHLEQCMEVELE-----KRLREVEIDLVRARLKADEQMCCNVCRIPVVDYYRHCPNCSYDLCLRCCQD 360

AT1G09060.1 7.22065e-2337.59%
transcription factor jumonji (jmjC) domain-containing protein | chr1:2921238-2925215 REVERSE
HSP 1 
Score: 105.145 bits (261), Expect = 7.22065e-23
Identity = 53/141 (37.59%), Postives = 81/141 (57.45%), Query Frame = -3
Query:  214 FCADCIKERYFDTQ-EDVKMACPVCRGTCTCKDCSANQSKDRESKDSLGEENNAEKILRFHYLICMLLPVLKRMNHDRSVELETEAITNGKKTSEVHIK--ESEFGCNEQNCCNNCKTSIVDLHRSCPNCSYNLCLGCCKD 627
            FC +C+  RY +   E+V+  CP CRG C CK C  +   D   K  + E    +K+   + L+  +LPV+K+++ ++ +E+E E     K+  EV I    +    +EQ CCN C+  +VD +R CPNCSY+LCL CC+D
Sbjct:  228 FCHNCLSARYSEISLEEVEKVCPACRGLCDCKSCLRS---DNTIKVRIREIPVLDKLQYLYRLLSAVLPVIKQIHLEQCMEVELE-----KRLREVEIDLVRARLKADEQMCCNVCRIPVVDYYRHCPNCSYDLCLRCCQD 360

AT3G07610.2 8.26149e-1934.27%
transcription factor jumonji (jmjC) domain-containing protein | chr3:2426154-2429364 FORWARD
HSP 1 
Score: 91.6633 bits (226), Expect = 8.26149e-19
Identity = 49/143 (34.27%), Postives = 77/143 (53.85%), Query Frame = -3
Query:  202 FCADCIKERY-FDTQEDVKMACPVCRGTCTCKDCSANQSKDRESKDSLGEENNAEKILRFHYLICMLLPVLKRMNHDRSVELETEAITNGKKTSEVHIKESEFGCNEQNCCNNCKTSIVDLHRSCPNCSYNLCLGCCKDFCRG 627
            +C  C+   Y    +EDV   C  C  TC C+ C    +K +    +L   +  EK+    +++  LLP LK +N ++  E E EA   G K  EV  ++++   +E+  C+ CKTSI DLHR+C +CS+++CL CC +   G
Sbjct:  176 YCHPCLDTWYPLIAKEDVAKKCMFCSSTCNCRACLRLDTKLKGINSNL-IVSEEEKVQASKFILQSLLPHLKGINDEQVAEKEVEAKIYGLKFEEVRPQDAKAFPDERLYCDICKTSIYDLHRNCKSCSFDICLSCCLEIRNG 317

AT3G07610.1 8.26149e-1934.27%
transcription factor jumonji (jmjC) domain-containing protein | chr3:2426154-2432882 FORWARD
HSP 1 
Score: 91.6633 bits (226), Expect = 8.26149e-19
Identity = 49/143 (34.27%), Postives = 77/143 (53.85%), Query Frame = -3
Query:  202 FCADCIKERY-FDTQEDVKMACPVCRGTCTCKDCSANQSKDRESKDSLGEENNAEKILRFHYLICMLLPVLKRMNHDRSVELETEAITNGKKTSEVHIKESEFGCNEQNCCNNCKTSIVDLHRSCPNCSYNLCLGCCKDFCRG 627
            +C  C+   Y    +EDV   C  C  TC C+ C    +K +    +L   +  EK+    +++  LLP LK +N ++  E E EA   G K  EV  ++++   +E+  C+ CKTSI DLHR+C +CS+++CL CC +   G
Sbjct:  176 YCHPCLDTWYPLIAKEDVAKKCMFCSSTCNCRACLRLDTKLKGINSNL-IVSEEEKVQASKFILQSLLPHLKGINDEQVAEKEVEAKIYGLKFEEVRPQDAKAFPDERLYCDICKTSIYDLHRNCKSCSFDICLSCCLEIRNG 317

Blast Hits to Contigs V2 WO454

Analysis Date: 11-17-2009 (Blast: CC454_contigs_v2_vs_WO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
WO454_contig18147_v22.51408e-7491.80%
WO454_contig18147_v2
HSP 1 
Score: 275.076 bits (594), Expect = 2.51408e-74
Identity = 112/122 (91.80%), Postives = 115/122 (94.26%), Query Frame = 3
Query:  336 *YELRKFSSHLLLPLFQAQHSGRGSFVLIQEEAYRSNNGNAVFFRRYFPPLKNPYFLCL*ID*LNNPYRCKFHDRLDTPS*HLLEYQNTVL*CNPHRRTLSDNWNTRQDSTSRFFDTNGTSS 701
            *YE RKFSSHL LPLFQAQHSGRGSFVLIQEEAYRSNNG+ VFF+ YFPPLKNPYFLCL*ID*LNNPYRCKFHDRLDTPS*HLLEYQNTVL*CNPHRRTLSDNWNT+QDST RFF  NGTSS
Sbjct:    1 *YERRKFSSHLYLPLFQAQHSGRGSFVLIQEEAYRSNNGSVVFFQLYFPPLKNPYFLCL*ID*LNNPYRCKFHDRLDTPS*HLLEYQNTVL*CNPHRRTLSDNWNTKQDSTIRFFGNNGTSS 366

HSP 2 
Score: 248.958 bits (537), Expect = 1.83083e-66
Identity = 106/113 (93.81%), Postives = 107/113 (94.69%), Query Frame = 1
Query:  331 LLDMNFGSFLPICYCLCFKLNTPVVVHSF*YRKKHTDQIMETQYFFGVIFLP*RILTFSVFRLIS*TILTGASSTTDWTRHLNIFLSIKIPFFDAIRTEELFLTTGTRDKTQR 669
            LLDMN GSFLPIC CLCFKLNTPVVVHSF*YRKKHTDQIME  YFF  IFLP*RILTFSVFRLIS*TILTGASSTTDWTRHLNIFLSIKIPFFDAIRTEELFLTTGTR+KTQR
Sbjct:   33 LLDMNVGSFLPICICLCFKLNTPVVVHSF*YRKKHTDQIMEA*YFFNFIFLP*RILTFSVFRLIS*TILTGASSTTDWTRHLNIFLSIKIPFFDAIRTEELFLTTGTRNKTQR 371

HSP 3 
Score: 246.667 bits (532), Expect = 8.96024e-66
Identity = 98/103 (95.15%), Postives = 100/103 (97.09%), Query Frame = -3
Query:  331 QKEFFCADCIKERYFDTQEDVKMACPVCRGTCTCKDCSANQSKDRESKDSLGEENNAEKILRFHYLICMLLPVLKRMNHDRSVELETEAITNGKKTSEVHIKE 639
            QKEFFCADCIKERYFDTQEDVKMACPVCRGTCTCKDCSANQSKDRESKDSLGEEN  EKILRFHYLICMLLPVLKRMNHDRSVELETEA TNGKKTS+VHIK+
Sbjct:   63 QKEFFCADCIKERYFDTQEDVKMACPVCRGTCTCKDCSANQSKDRESKDSLGEENKVEKILRFHYLICMLLPVLKRMNHDRSVELETEANTNGKKTSDVHIKQ 371

HSP 4 
Score: 135.322 bits (289), Expect = 1.07783e-54
Identity = 59/63 (93.65%), Postives = 61/63 (96.83%), Query Frame = -2
Query:  506 VPLVSKKRLVESCLVFQLSERVLLCGLHQRTVF*YSRRC*DGVSSLSWNLHL*GLFS*SI*RQ 694
            VPL+ KKR+VESC VFQLSERVLLCGLHQRTVF*YSRRC*DGVSSLSWNLHL*GLFS*SI*RQ
Sbjct:    8 VPLLPKKRIVESCFVFQLSERVLLCGLHQRTVF*YSRRC*DGVSSLSWNLHL*GLFS*SI*RQ 196

HSP 5 
Score: 95.9165 bits (203), Expect = 1.07783e-54
Identity = 38/43 (88.37%), Postives = 38/43 (88.37%), Query Frame = -2
Query:  335 NTAFPLFDLYASSCIKTNEPRPEC*A*NRGNNKWEENFRSSYQ 463
            NT  PLFDLYASSCIKTNEPRPEC*A*NRG  KWEENFR SYQ
Sbjct:  239 NTTLPLFDLYASSCIKTNEPRPEC*A*NRGKYKWEENFRRSYQ 367

HSP 6 
Score: 119.743 bits (255), Expect = 1.51964e-51
Identity = 51/54 (94.44%), Postives = 52/54 (96.30%), Query Frame = 2
Query:  539 QVQVPRQTGHAILTSS*VSKYRSLMQSAQKNSF*QLEHETRLNEPLLRHQWHLL 700
            QVQVPRQTGHAILTSS*VSKYRSLMQSAQKNSF*QLEHETRLN+PL R QWHLL
Sbjct:    2 QVQVPRQTGHAILTSS*VSKYRSLMQSAQKNSF*QLEHETRLNDPLFRQQWHLL 163

HSP 7 
Score: 100.957 bits (214), Expect = 1.51964e-51
Identity = 44/45 (97.78%), Postives = 44/45 (97.78%), Query Frame = 2
Query:  335 LI*TSEVFFPFVIASVSSSTLRSWFIRFNTGRSIQIK*WKRSIFS 469
            LI*TSEVFFPFV ASVSSSTLRSWFIRFNTGRSIQIK*WKRSIFS
Sbjct:  233 LI*TSEVFFPFVFASVSSSTLRSWFIRFNTGRSIQIK*WKRSIFS 367

HSP 8 
Score: 188.016 bits (404), Expect = 4.0545e-48
Identity = 88/94 (93.62%), Postives = 88/94 (93.62%), Query Frame = -1
Query:  336 IASKNGILILKKMLRWRVQSVVELAPVRIVQLINLKTEKVRIL*GRKITPKKYCVSII*SVCFFLY*NE*TTTGVLSLKQRQ*QMGRKLPKFIS 617
            IASKNGILILKKMLRWRVQSVVELAPVRIVQLINLKTEKVRIL*GRKI  KKY  SII*SVCFFLY*NE*TTTGVLSLKQRQ QMGRKLP FIS
Sbjct:   85 IASKNGILILKKMLRWRVQSVVELAPVRIVQLINLKTEKVRIL*GRKIKLKKYYASII*SVCFFLY*NE*TTTGVLSLKQRQIQMGRKLPTFIS 366

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