AC454_contig32099_v2

NameAC454_contig32099_v2
AccessionID2174665
Sequence
CTCCACCTTACGAGTACAAATCCCCACCACCCCCTGAACACTCACCTCCA
CCACCATACGAGTACAAATCACCTCCCCCACCAGAGAAATCTCCTCCACC
ACCGGTCTACATTTATGCATCTCCCCCACCACCACCTACAGAACCATACA
AGTACTCATCCCCACCACCACCACCATaATGAGTACAAGTCCCCACCACC
ACCTGTACACTCTCCACCACCACCRTACGAGTACAAGTCYCCACCACCAC
CAGAGAAGTCTCCTCCTCCACCWTACTACTACAAATCTCCACCACCACCA
GTCCACTCTCCTCCACCATACTACTACAAGTCCCCACCACCGCCACCATA
TGTGTACAAGTCTCCACCACCACCAGTCCACTCTCCACCACCATACTATT
ATAAATCCCCACCACCACCAACATACTTGTACAAGT
Length436
Typecontig
Organism American Chestnut

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References

Dababase Accession
GFF_source SeqManPro

ESTs in this contig

Type Feature Position
EST ACHS2n_159991_3869_1168 0-275
microsatellite AC454_contig32099_v2-ssr162 161 176 0
EST ACWP1_120100_2549_1221 175-436
microsatellite AC454_contig32099_v2-ssr241 240 252 0
microsatellite AC454_contig32099_v2-ssr289 288 300 0
microsatellite AC454_contig32099_v2-ssr364 363 375 0
microsatellite AC454_contig32099_v2-ssr409 408 420 0

InterProScan Analysis

Analysis Date: 11-03-2009 (Interpro: AC454_contigs_v2)
SEQUENCE: AC454_contig32099_v2_1_ORF1 CRC64: C4EF0C95D27C1AFC LENGTH: 145 aa
No hits reported.
SEQUENCE: AC454_contig32099_v2_2_ORF2 CRC64: DA1A8BBE27F3E6C7 LENGTH: 133 aa
No hits reported.
SEQUENCE: AC454_contig32099_v2_3_ORF1 CRC64: 29720C4A66855FAC LENGTH: 58 aa
No hits reported.
SEQUENCE: AC454_contig32099_v2_3_ORF2 CRC64: 46C3FE9AD8147DD4 LENGTH: 73 aa
No hits reported.
SEQUENCE: AC454_contig32099_v2_4_ORF1 CRC64: 6DE69B467DD1F298 LENGTH: 99 aa
No hits reported.
SEQUENCE: AC454_contig32099_v2_5_ORF1 CRC64: 9264E960F3C8BA4B LENGTH: 107 aa
No hits reported.
SEQUENCE: AC454_contig32099_v2_1_ORF1 CRC64: C4EF0C95D27C1AFC LENGTH: 145 aa
No hits reported.
SEQUENCE: AC454_contig32099_v2_2_ORF2 CRC64: DA1A8BBE27F3E6C7 LENGTH: 133 aa
No hits reported.
SEQUENCE: AC454_contig32099_v2_3_ORF1 CRC64: 29720C4A66855FAC LENGTH: 58 aa
No hits reported.
SEQUENCE: AC454_contig32099_v2_3_ORF2 CRC64: 46C3FE9AD8147DD4 LENGTH: 73 aa
No hits reported.
SEQUENCE: AC454_contig32099_v2_4_ORF1 CRC64: 6DE69B467DD1F298 LENGTH: 99 aa
No hits reported.
SEQUENCE: AC454_contig32099_v2_5_ORF1 CRC64: 9264E960F3C8BA4B LENGTH: 107 aa
No hits reported.

Blast Hits to Contigs V2 AB454

Analysis Date: 11-03-2009 (Blast: AC454_contigs_v2_vs_AB454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
AB454_contig6352_v22.52929e-1475.61%
AB454_contig6352_v2
HSP 1 
Score: 69.7986 bits (146), Expect = 2.52929e-14
Identity = 31/41 (75.61%), Postives = 34/41 (82.93%), Query Frame = -1
Query:  299 LVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 421
            +VVVG Y+S V ES LVVVETCTHMV VVGTCSS V+ES L
Sbjct:  316 MVVVGTYSSTVEESRLVVVETCTHMVEVVGTCSSXVQESVL 438

HSP 2 
Score: 23.0613 bits (44), Expect = 2.52929e-14
Identity = 5/5 (100.00%), Postives = 5/5 (100.00%), Query Frame = -3
Query:  123 RWWWG 137
            RWWWG
Sbjct:  887 RWWWG 901

HSP 3 
Score: 63.8419 bits (133), Expect = 2.64511e-12
Identity = 30/46 (65.22%), Postives = 33/46 (71.74%), Query Frame = -1
Query:  299 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 436
            TCT M+ VVG  +S V ES LVVV  CTHM+ VV TCSSM EES L
Sbjct:  586 TCTHMVEVVGTCSSTVQESVLVVVGICTHMLVVVETCSSMEEESTL 723

HSP 4 
Score: 22.1449 bits (42), Expect = 2.64511e-12
Identity = 5/9 (55.56%), Postives = 6/9 (66.67%), Query Frame = -3
Query:  108 WWWGRCINV 134
            WWW R + V
Sbjct:  857 WWWRRLVEV 883

AB454_contig4205_v24.68725e-1475.61%
AB454_contig4205_v2
HSP 1 
Score: 69.7986 bits (146), Expect = 4.68725e-14
Identity = 31/41 (75.61%), Postives = 34/41 (82.93%), Query Frame = -1
Query:  299 LVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 421
            +VVVG Y+S V ES LVVVETCTHMV VVGTCSS V+ES L
Sbjct: 1305 MVVVGTYSSTVEESRLVVVETCTHMVEVVGTCSSTVQESVL 1427

HSP 2 
Score: 23.0613 bits (44), Expect = 4.68725e-14
Identity = 5/5 (100.00%), Postives = 5/5 (100.00%), Query Frame = -3
Query:  123 RWWWG 137
            RWWWG
Sbjct: 1606 RWWWG 1620

HSP 3 
Score: 63.8419 bits (133), Expect = 9.03691e-12
Identity = 30/46 (65.22%), Postives = 33/46 (71.74%), Query Frame = -1
Query:  299 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 436
            TCT M+ VVG  +S V ES LVVV  CTHM+ VV TCSSM EES L
Sbjct: 1365 TCTHMVEVVGTCSSTVQESVLVVVGICTHMLVVVETCSSMEEESRL 1502

AB454_contig2164_v21.86359e-1268.18%
AB454_contig2164_v2
HSP 1 
Score: 66.1329 bits (138), Expect = 1.86359e-12
Identity = 30/44 (68.18%), Postives = 31/44 (70.45%), Query Frame = -2
Query:    4 VVVGEMHKCRPVVEEISLVGEVICTRMXXXXXXXXXVGICTRKV 135
            +VVGEMHKC PVVEEISLVG  ICTRM         VGICTR V
Sbjct:  183 LVVGEMHKCMPVVEEISLVGVGICTRMVVEESALGVVGICTRMV 314

HSP 2 
Score: 62.4673 bits (130), Expect = 2.36497e-11
Identity = 27/44 (61.36%), Postives = 31/44 (70.45%), Query Frame = 2
Query:    2 STLRVQIXXXXXXXXXXXIRVQITSPTREISSTTGLHLCISPTT 133
            +T+RV I           IRVQI +PTREISSTTG+HLCISPTT
Sbjct:  185 TTIRVHIPTTPSALSSTTIRVQIPTPTREISSTTGIHLCISPTT 316

AB454_contig5309_v21.89873e-1270.73%
AB454_contig5309_v2
HSP 1 
Score: 64.3001 bits (134), Expect = 1.89873e-12
Identity = 29/41 (70.73%), Postives = 32/41 (78.05%), Query Frame = -1
Query:  299 LVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 421
            +VVVG Y+S V  S LVVV TCTHMV VVGTCSS V+ES L
Sbjct:  322 MVVVGTYSSTVEXSRLVVVXTCTHMVEVVGTCSSXVQESVL 444

HSP 2 
Score: 21.6867 bits (41), Expect = 1.89873e-12
Identity = 5/9 (55.56%), Postives = 6/9 (66.67%), Query Frame = -3
Query:  108 WWWGRCINV 134
            WWW R + V
Sbjct:  473 WWWWRLVXV 499

Blast Hits to Contigs V2 ABall

Analysis Date: 11-03-2009 (Blast: AC454_contigs_v2_vs_ABall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
ABall_contig4285_v24.65659e-1475.61%
ABall_contig4285_v2
HSP 1 
Score: 69.7986 bits (146), Expect = 4.65659e-14
Identity = 31/41 (75.61%), Postives = 34/41 (82.93%), Query Frame = -1
Query:  299 LVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 421
            +VVVG Y+S V ES LVVVETCTHMV VVGTCSS V+ES L
Sbjct:  438 MVVVGTYSSTVEESRLVVVETCTHMVEVVGTCSSTVQESVL 560

HSP 2 
Score: 23.0613 bits (44), Expect = 4.65659e-14
Identity = 5/5 (100.00%), Postives = 5/5 (100.00%), Query Frame = -3
Query:  123 RWWWG 137
            RWWWG
Sbjct:  245 RWWWG 259

HSP 3 
Score: 63.8419 bits (133), Expect = 9.20859e-12
Identity = 30/46 (65.22%), Postives = 33/46 (71.74%), Query Frame = -1
Query:  299 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 436
            TCT M+ VVG  +S V ES LVVV  CTHM+ VV TCSSM EES L
Sbjct:  363 TCTHMVEVVGTCSSTVQESVLVVVGICTHMLVVVETCSSMEEESRL 500

ABall_contig6452_v21.54405e-1373.17%
ABall_contig6452_v2
HSP 1 
Score: 67.0494 bits (140), Expect = 1.54405e-13
Identity = 30/41 (73.17%), Postives = 33/41 (80.49%), Query Frame = -1
Query:  299 LVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 421
            +VVVG Y+S V ES LVVV TCTHMV VVGTCSS V+ES L
Sbjct:  557 MVVVGTYSSTVEESRLVVVXTCTHMVEVVGTCSSXVQESVL 679

HSP 2 
Score: 23.0613 bits (44), Expect = 1.54405e-13
Identity = 5/5 (100.00%), Postives = 5/5 (100.00%), Query Frame = -3
Query:  123 RWWWG 137
            RWWWG
Sbjct:   94 RWWWG 108

HSP 3 
Score: 63.8419 bits (133), Expect = 2.51053e-12
Identity = 30/46 (65.22%), Postives = 33/46 (71.74%), Query Frame = -1
Query:  299 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 436
            TCT M+ VVG  +S V ES LVVV  CTHM+ VV TCSSM EES L
Sbjct:  272 TCTHMVEVVGTCSSTVQESVLVVVGICTHMLVVVETCSSMEEESTL 409

HSP 4 
Score: 22.1449 bits (42), Expect = 2.51053e-12
Identity = 5/9 (55.56%), Postives = 6/9 (66.67%), Query Frame = -3
Query:  108 WWWGRCINV 134
            WWW R + V
Sbjct:  112 WWWRRLVEV 138

ABall_contig8210_v21.64587e-1380.00%
ABall_contig8210_v2
HSP 1 
Score: 41.8479 bits (85), Expect = 1.64587e-13
Identity = 16/20 (80.00%), Postives = 18/20 (90.00%), Query Frame = -1
Query:  314 VVVETCTHMVAVVGTCSSMV 373
            VVV TCTHMV VVGTC++MV
Sbjct:  155 VVVGTCTHMVVVVGTCTNMV 214

HSP 2 
Score: 31.7673 bits (63), Expect = 1.64587e-13
Identity = 14/18 (77.78%), Postives = 14/18 (77.78%), Query Frame = -2
Query:   55 RPVVEEISLVGEVICTRM 108
            R V EEISLVGE ICT M
Sbjct:  281 RMVEEEISLVGEEICTHM 334

HSP 3 
Score: 29.9345 bits (59), Expect = 1.64587e-13
Identity = 14/21 (66.67%), Postives = 17/21 (80.95%), Query Frame = -1
Query:  365 SMLVVVGIYNSMVVESGLVVV 427
            S+LVVVGIY+SMV E+   VV
Sbjct:   98 SVLVVVGIYSSMVEEASEPVV 160

ABall_contig4302_v22.0558e-1375.61%
ABall_contig4302_v2
HSP 1 
Score: 69.3404 bits (145), Expect = 2.0558e-13
Identity = 31/41 (75.61%), Postives = 34/41 (82.93%), Query Frame = -1
Query:  299 LVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 421
            +VVVG Y+S V ES LVVV TCTHMV VVGTCSSMV+ES L
Sbjct:   54 MVVVGTYSSTVEESRLVVVGTCTHMVEVVGTCSSMVQESVL 176

ABall_contig2238_v21.89899e-1268.18%
ABall_contig2238_v2
HSP 1 
Score: 66.1329 bits (138), Expect = 1.89899e-12
Identity = 30/44 (68.18%), Postives = 31/44 (70.45%), Query Frame = -2
Query:    4 VVVGEMHKCRPVVEEISLVGEVICTRMXXXXXXXXXVGICTRKV 135
            +VVGEMHKC PVVEEISLVG  ICTRM         VGICTR V
Sbjct:  910 LVVGEMHKCMPVVEEISLVGVGICTRMVVEESALGVVGICTRMV 1041

HSP 2 
Score: 62.4673 bits (130), Expect = 2.4099e-11
Identity = 27/44 (61.36%), Postives = 31/44 (70.45%), Query Frame = 2
Query:    2 STLRVQIXXXXXXXXXXXIRVQITSPTREISSTTGLHLCISPTT 133
            +T+RV I           IRVQI +PTREISSTTG+HLCISPTT
Sbjct:  908 TTIRVHIPTTPSALSSTTIRVQIPTPTREISSTTGIHLCISPTT 1039

Blast Hits to Contigs V2 CC454

Analysis Date: 11-03-2009 (Blast: AC454_contigs_v2_vs_CC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
CC454_contig25315_v23.05895e-25100.00%
CC454_contig25315_v2
HSP 1 
Score: 107.83 bits (229), Expect = 3.05895e-25
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = -1
Query:  299 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 436
            TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL
Sbjct:  132 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 269

HSP 2 
Score: 22.6031 bits (43), Expect = 3.05895e-25
Identity = 5/9 (55.56%), Postives = 7/9 (77.78%), Query Frame = -3
Query:  108 WWWGRCINV 134
            WWW R ++V
Sbjct:  107 WWWWRLVHV 133

CC454_contig31403_v21.13355e-2295.65%
CC454_contig31403_v2
HSP 1 
Score: 101.873 bits (216), Expect = 1.13355e-22
Identity = 44/46 (95.65%), Postives = 44/46 (95.65%), Query Frame = -1
Query:  299 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 436
            TCTSMLVVVGIY S VVESGLVVVETCTHMVAVVGTCSSMVEESGL
Sbjct:  502 TCTSMLVVVGIYXSXVVESGLVVVETCTHMVAVVGTCSSMVEESGL 639

HSP 2 
Score: 22.6031 bits (43), Expect = 1.13355e-22
Identity = 5/9 (55.56%), Postives = 7/9 (77.78%), Query Frame = -3
Query:  108 WWWGRCINV 134
            WWW R ++V
Sbjct:  477 WWWWRLVHV 503

HSP 3 
Score: 70.2568 bits (147), Expect = 1.33823e-13
Identity = 30/46 (65.22%), Postives = 34/46 (73.91%), Query Frame = -1
Query:  299 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 436
            TCT M  VVG Y+SMVVESGLVVVETCT    V GTC+SM+   G+
Sbjct:  607 TCTXMXXVVGXYSSMVVESGLVVVETCTXXXVVXGTCTSMLVVVGI 744

HSP 4 
Score: 23.5196 bits (45), Expect = 1.33823e-13
Identity = 11/26 (42.31%), Postives = 14/26 (53.85%), Query Frame = -2
Query:   55 VVGEMHKCRPVVEEISLVGEVICTRM 132
            +V  +  C  +VEE  LV    CTRM
Sbjct:  475 MVAVVGTCSSMVEESGLVVVETCTRM 552

CC454_contig19675_v25.78956e-1577.27%
CC454_contig19675_v2
HSP 1 
Score: 77.5882 bits (163), Expect = 5.78956e-15
Identity = 34/44 (77.27%), Postives = 34/44 (77.27%), Query Frame = -2
Query:    1 VVGEMHKCRPVVEEISLVGEVICTRMXXXXXXXXXVGICTRKVE 132
            VVGEMHKCRPVVEEISLVGEVICTRM         VG CTRKVE
Sbjct: 1367 VVGEMHKCRPVVEEISLVGEVICTRMVVEVSVQGVVGTCTRKVE 1498

HSP 2 
Score: 70.2568 bits (147), Expect = 9.3239e-13
Identity = 32/44 (72.73%), Postives = 33/44 (75.00%), Query Frame = 2
Query:    2 STLRVQIXXXXXXXXXXXIRVQITSPTREISSTTGLHLCISPTT 133
            STLRVQ+           IRVQITSPTREISSTTGLHLCISPTT
Sbjct: 1368 STLRVQVPTTP*TLTSTTIRVQITSPTREISSTTGLHLCISPTT 1499

CC454_contig45195_v21.38673e-1388.57%
CC454_contig45195_v2
HSP 1 
Score: 73.0061 bits (153), Expect = 1.38673e-13
Identity = 31/35 (88.57%), Postives = 32/35 (91.43%), Query Frame = -1
Query:  332 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVG 436
            TCTSMLVVVGIY+S VVESGLVVVETCTHMV  VG
Sbjct:   16 TCTSMLVVVGIYSSRVVESGLVVVETCTHMVVEVG 120

CC454_contig26796_v21.30508e-1170.73%
CC454_contig26796_v2
HSP 1 
Score: 65.2165 bits (136), Expect = 1.30508e-11
Identity = 29/41 (70.73%), Postives = 31/41 (75.61%), Query Frame = -1
Query:  314 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMV 436
            TCTSMLVVVGIY+S VVES  VVV TC HMV  VG  + MV
Sbjct:  563 TCTSMLVVVGIYSSRVVESXXVVVGTCXHMVVXVGMSTCMV 685

HSP 2 
Score: 21.6867 bits (41), Expect = 1.30508e-11
Identity = 5/7 (71.43%), Postives = 5/7 (71.43%), Query Frame = -3
Query:  123 FCRWWWG 143
            F  WWWG
Sbjct:  544 FSWWWWG 564

Blast Hits to Contigs V2 CCall

Analysis Date: 11-03-2009 (Blast: AC454_contigs_v2_vs_CCall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
CCall_contig47742_v22.24749e-24100.00%
CCall_contig47742_v2
HSP 1 
Score: 107.83 bits (229), Expect = 2.24749e-24
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = -1
Query:  299 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 436
            TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL
Sbjct:  608 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 745

HSP 2 
Score: 22.6031 bits (43), Expect = 2.24749e-24
Identity = 5/9 (55.56%), Postives = 7/9 (77.78%), Query Frame = -3
Query:  108 WWWGRCINV 134
            WWW R ++V
Sbjct:  744 WWWWRLVHV 770

HSP 3 
Score: 85.8359 bits (181), Expect = 3.93192e-18
Identity = 36/46 (78.26%), Postives = 40/46 (86.96%), Query Frame = -1
Query:  299 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 436
            TCTSMLVVVGIY+S VVESGLVVVETCTHMV V GTC+SM+   G+
Sbjct:  503 TCTSMLVVVGIYSSRVVESGLVVVETCTHMVVVXGTCTSMLVVVGI 640

HSP 4 
Score: 23.5196 bits (45), Expect = 3.93192e-18
Identity = 11/26 (42.31%), Postives = 14/26 (53.85%), Query Frame = -2
Query:   55 VVGEMHKCRPVVEEISLVGEVICTRM 132
            +V  +  C  +VEE  LV    CTRM
Sbjct:  695 MVAVVGTCSSMVEESGLVVVETCTRM 772

CCall_contig24999_v21.61257e-1984.78%
CCall_contig24999_v2
HSP 1 
Score: 89.0434 bits (188), Expect = 1.61257e-19
Identity = 39/46 (84.78%), Postives = 39/46 (84.78%), Query Frame = -1
Query:  299 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 436
            TCTSM  VVG   SMV ESGLVVVETCTHMVAVVG CSSMVEESGL
Sbjct:  125 TCTSMXXVVGXXXSMVXESGLVVVETCTHMVAVVGXCSSMVEESGL 262

HSP 2 
Score: 22.6031 bits (43), Expect = 1.61257e-19
Identity = 5/9 (55.56%), Postives = 7/9 (77.78%), Query Frame = -3
Query:  108 WWWGRCINV 134
            WWW R ++V
Sbjct:  261 WWWWRLVHV 287

CCall_contig17369_v22.73833e-1778.57%
CCall_contig17369_v2
HSP 1 
Score: 77.13 bits (162), Expect = 2.73833e-17
Identity = 33/42 (78.57%), Postives = 36/42 (85.71%), Query Frame = -1
Query:  311 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVE 436
            TCTSMLVVVGIY+S VVESGLVVVETCTHMV  VG  + MV+
Sbjct: 1039 TCTSMLVVVGIYSSRVVESGLVVVETCTHMVVEVGMSTCMVQ 1164

HSP 2 
Score: 24.436 bits (47), Expect = 2.73833e-17
Identity = 6/9 (66.67%), Postives = 6/9 (66.67%), Query Frame = -3
Query:  117 FCRWWWGRC 143
            F  WWWG C
Sbjct: 1239 FIWWWWGIC 1265

HSP 3 
Score: 23.5196 bits (45), Expect = 2.73833e-17
Identity = 14/34 (41.18%), Postives = 15/34 (44.12%), Query Frame = -2
Query:    1 VVEEISLVGEVICTRMXXXXXXXXXVGICTRKVE 102
            V EE SLV    C+ M         VG CT  VE
Sbjct: 1275 VEEETSLVVVGTCSSMVEEEISLVVVGTCTHMVE 1376

CCall_contig3850_v21.29818e-1678.57%
CCall_contig3850_v2
HSP 1 
Score: 77.13 bits (162), Expect = 1.29818e-16
Identity = 33/42 (78.57%), Postives = 36/42 (85.71%), Query Frame = -1
Query:  311 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVE 436
            TCTSMLVVVGIY+S VVESGLVVVETCTHMV  VG  + MV+
Sbjct:  860 TCTSMLVVVGIYSSRVVESGLVVVETCTHMVVEVGMSTCMVQ 985

HSP 2 
Score: 23.0613 bits (44), Expect = 1.29818e-16
Identity = 5/5 (100.00%), Postives = 5/5 (100.00%), Query Frame = -3
Query:  123 RWWWG 137
            RWWWG
Sbjct:  636 RWWWG 650

HSP 3 
Score: 21.6867 bits (41), Expect = 1.29818e-16
Identity = 12/33 (36.36%), Postives = 14/33 (42.42%), Query Frame = -2
Query:    4 VVEEISLVGEVICTRMXXXXXXXXXVGICTRKV 102
            VV E + V EV CT             +CT KV
Sbjct:  247 VVVENAQVEEVTCTHXVVVENAQVVEVMCTHKV 345

CCall_contig6670_v26.011e-1577.27%
CCall_contig6670_v2
HSP 1 
Score: 77.5882 bits (163), Expect = 6.011e-15
Identity = 34/44 (77.27%), Postives = 34/44 (77.27%), Query Frame = -2
Query:    1 VVGEMHKCRPVVEEISLVGEVICTRMXXXXXXXXXVGICTRKVE 132
            VVGEMHKCRPVVEEISLVGEVICTRM         VG CTRKVE
Sbjct:  519 VVGEMHKCRPVVEEISLVGEVICTRMVVEVSVQGVVGTCTRKVE 650

HSP 2 
Score: 70.2568 bits (147), Expect = 9.68053e-13
Identity = 32/44 (72.73%), Postives = 33/44 (75.00%), Query Frame = 2
Query:    2 STLRVQIXXXXXXXXXXXIRVQITSPTREISSTTGLHLCISPTT 133
            STLRVQ+           IRVQITSPTREISSTTGLHLCISPTT
Sbjct:  518 STLRVQVPTTP*TLTSTTIRVQITSPTREISSTTGLHLCISPTT 649

Blast Hits to Contig V2 Oall

Analysis Date: 11-03-2009 (Blast: AC454_contigs_v2_vs_Oall_contigs_v2)
Best 10 Hits Shown | Show Best 25 Hits
Note: Click a description for more details.
Match Name E value Identity
Oall_contig39032_v25.57867e-2280.43%
Oall_contig39032_v2
HSP 1 
Score: 87.2105 bits (184), Expect = 5.57867e-22
Identity = 37/46 (80.43%), Postives = 41/46 (89.13%), Query Frame = -1
Query:  299 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 436
            TCTSMLVVVGIY+SMVVES LVVVETCTHMV VVGTC+SM+   G+
Sbjct:  149 TCTSMLVVVGIYSSMVVESRLVVVETCTHMVVVVGTCTSMLVVVGI 286

HSP 2 
Score: 26.2688 bits (51), Expect = 5.57867e-22
Identity = 6/7 (85.71%), Postives = 6/7 (85.71%), Query Frame = -3
Query:  123 FCRWWWG 143
            FC WWWG
Sbjct:  717 FCWWWWG 737

HSP 3 
Score: 25.8106 bits (50), Expect = 5.57867e-22
Identity = 15/33 (45.45%), Postives = 15/33 (45.45%), Query Frame = -2
Query:    4 VVEEISLVGEVICTRMXXXXXXXXXVGICTRKV 102
            V EEISLV    CT M         VG CT  V
Sbjct:  752 VEEEISLVVVGTCTHMVEEELSLVVVGTCTHMV 850

HSP 4 
Score: 67.9658 bits (142), Expect = 6.42289e-15
Identity = 30/42 (71.43%), Postives = 33/42 (78.57%), Query Frame = -1
Query:  311 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVE 436
            TCTSMLVVVGIY+SMV ES  VVV TCTHMV  VG  + MV+
Sbjct:  254 TCTSMLVVVGIYSSMVXESVQVVVGTCTHMVVXVGMSTCMVQ 379

HSP 5 
Score: 25.3524 bits (49), Expect = 6.42289e-15
Identity = 15/33 (45.45%), Postives = 15/33 (45.45%), Query Frame = -2
Query:    4 VVEEISLVGEVICTRMXXXXXXXXXVGICTRKV 102
            V EEISLV    C  M         VGICT  V
Sbjct:  410 VEEEISLVVVGTCIHMVEEELSLVVVGICTHMV 508

HSP 6 
Score: 21.6867 bits (41), Expect = 6.42289e-15
Identity = 5/7 (71.43%), Postives = 5/7 (71.43%), Query Frame = -3
Query:  123 FCRWWWG 143
            F  WWWG
Sbjct:  375 FSWWWWG 395

HSP 7 
Score: 35.433 bits (71), Expect = 5.76835e-13
Identity = 16/24 (66.67%), Postives = 18/24 (75.00%), Query Frame = -1
Query:  305 LVVVETCTHMVAVVGTCSSMVEES 376
            +VVV TCT M+ VVG  SSMV ES
Sbjct:  239 VVVVGTCTSMLVVVGIYSSMVXES 310

HSP 8 
Score: 33.1419 bits (66), Expect = 5.76835e-13
Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = -1
Query:  365 GIYNSMVVESGLVVV 409
            GIY+SMVVESGLVVV
Sbjct:   53 GIYSSMVVESGLVVV 97

HSP 9 
Score: 25.8106 bits (50), Expect = 5.76835e-13
Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = -1
Query:  407 TCTSMLVVVG 436
            TCTSMLVVVG
Sbjct:   25 TCTSMLVVVG 54

HSP 10 
Score: 23.0613 bits (44), Expect = 5.76835e-13
Identity = 5/5 (100.00%), Postives = 5/5 (100.00%), Query Frame = -3
Query:  123 RWWWG 137
            RWWWG
Sbjct:  315 RWWWG 329

HSP 11 
Score: 21.6867 bits (41), Expect = 5.76835e-13
Identity = 10/16 (62.50%), Postives = 11/16 (68.75%), Query Frame = -2
Query:   55 VVEEISLVGEVICTRM 102
            V EE+SLV   ICT M
Sbjct:  458 VEEELSLVVVGICTHM 505

Oall_contig37149_v26.8243e-2293.48%
Oall_contig37149_v2
HSP 1 
Score: 99.5822 bits (211), Expect = 6.8243e-22
Identity = 43/46 (93.48%), Postives = 44/46 (95.65%), Query Frame = -1
Query:  299 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 436
            TCTSMLVVVGIY+SMVVESGLVVVETCT MV VVGTCSSMVEESGL
Sbjct:  378 TCTSMLVVVGIYSSMVVESGLVVVETCTXMVVVVGTCSSMVEESGL 515

HSP 2 
Score: 22.6031 bits (43), Expect = 6.8243e-22
Identity = 5/9 (55.56%), Postives = 7/9 (77.78%), Query Frame = -3
Query:  108 WWWGRCINV 134
            WWW R ++V
Sbjct:  353 WWWWRLVHV 379

HSP 3 
Score: 84.9195 bits (179), Expect = 1.08816e-17
Identity = 36/46 (78.26%), Postives = 40/46 (86.96%), Query Frame = -1
Query:  299 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 436
            TCTSMLVVVGIY+SMVVES LVVV TCTHMV VVGTC+SM+   G+
Sbjct:  483 TCTSMLVVVGIYSSMVVESXLVVVXTCTHMVVVVGTCTSMLVVVGI 620

HSP 4 
Score: 23.0613 bits (44), Expect = 1.08816e-17
Identity = 10/19 (52.63%), Postives = 11/19 (57.89%), Query Frame = -2
Query:   55 CRPVVEEISLVGEVICTRM 111
            C  +VEE  LV    CTRM
Sbjct:  351 CSSMVEESGLVVVETCTRM 407

HSP 5 
Score: 47.3464 bits (97), Expect = 1.75077e-11
Identity = 21/27 (77.78%), Postives = 22/27 (81.48%), Query Frame = -1
Query:  356 TCTSMLVVVGIYNSMVVESGLVVVETC 436
            TCTSMLVVVGIY+SMVVES LV    C
Sbjct:  916 TCTSMLVVVGIYSSMVVESXLVGGREC 996

HSP 6 
Score: 39.5569 bits (80), Expect = 1.75077e-11
Identity = 18/26 (69.23%), Postives = 20/26 (76.92%), Query Frame = -1
Query:  299 LVVVETCTHMVAVVGTCSSMVEESGL 376
            +VVV TCT M+ VVG  SSMV ESGL
Sbjct:  453 VVVVGTCTSMLVVVGIYSSMVVESGL 530

Oall_contig37538_v21.29242e-1980.43%
Oall_contig37538_v2
HSP 1 
Score: 88.5852 bits (187), Expect = 1.29242e-19
Identity = 37/46 (80.43%), Postives = 41/46 (89.13%), Query Frame = -1
Query:  299 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 436
            TCTSMLVVVGIY+SMVVESGLVVVETCTHM  VVGTC+SM+   G+
Sbjct:   95 TCTSMLVVVGIYSSMVVESGLVVVETCTHMXVVVGTCTSMLVVVGI 232

HSP 2 
Score: 22.6031 bits (43), Expect = 1.29242e-19
Identity = 5/9 (55.56%), Postives = 7/9 (77.78%), Query Frame = -3
Query:  108 WWWGRCINV 134
            WWW R ++V
Sbjct:  261 WWWWRLVHV 287

HSP 3 
Score: 84.9195 bits (179), Expect = 2.91684e-17
Identity = 36/39 (92.31%), Postives = 37/39 (94.87%), Query Frame = -1
Query:  320 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSS 436
            TCTSMLVVVGIY+SMVVESGLVVVETCT MV VVGTCSS
Sbjct:  200 TCTSMLVVVGIYSSMVVESGLVVVETCTRMVVVVGTCSS 316

Oall_contig37551_v21.91036e-1980.43%
Oall_contig37551_v2
HSP 1 
Score: 87.2105 bits (184), Expect = 1.91036e-19
Identity = 37/46 (80.43%), Postives = 41/46 (89.13%), Query Frame = -1
Query:  299 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 436
            TCTSMLVVVGIY+SMVVES LVVVETCTHMV VVGTC+SM+   G+
Sbjct:   65 TCTSMLVVVGIYSSMVVESRLVVVETCTHMVVVVGTCTSMLVVVGI 202

HSP 2 
Score: 23.5196 bits (45), Expect = 1.91036e-19
Identity = 5/6 (83.33%), Postives = 5/6 (83.33%), Query Frame = -3
Query:  117 WWWGRC 134
            WWW RC
Sbjct:   19 WWWWRC 36

Oall_contig38680_v23.33131e-1982.61%
Oall_contig38680_v2
HSP 1 
Score: 89.9598 bits (190), Expect = 3.33131e-19
Identity = 38/46 (82.61%), Postives = 41/46 (89.13%), Query Frame = -1
Query:  299 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 436
            TCTSMLVVVGIY+SMVVESGLVVVETCTHMV VVGTC+ MV   G+
Sbjct:  471 TCTSMLVVVGIYSSMVVESGLVVVETCTHMVVVVGTCTXMVVVVGM 608

HSP 2 
Score: 21.6867 bits (41), Expect = 3.33131e-19
Identity = 5/7 (71.43%), Postives = 5/7 (71.43%), Query Frame = -3
Query:  123 FCRWWWG 143
            F  WWWG
Sbjct:  437 FSWWWWG 457

Oall_contig7527_v25.04416e-1992.68%
Oall_contig7527_v2
HSP 1 
Score: 87.2105 bits (184), Expect = 5.04416e-19
Identity = 38/41 (92.68%), Postives = 39/41 (95.12%), Query Frame = -1
Query:  299 LVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 421
            LVVVGIY+SMVVESGLVVVETCT MV VVGTCSSMVEESGL
Sbjct: 1163 LVVVGIYSSMVVESGLVVVETCTRMVVVVGTCSSMVEESGL 1285

HSP 2 
Score: 25.3524 bits (49), Expect = 5.04416e-19
Identity = 15/33 (45.45%), Postives = 15/33 (45.45%), Query Frame = -2
Query:    4 VVEEISLVGEVICTRMXXXXXXXXXVGICTRKV 102
            V EEISLV    C  M         VGICT  V
Sbjct:  743 VEEEISLVVVGTCIHMVEEELSLVVVGICTHMV 841

Oall_contig35750_v21.68927e-1895.00%
Oall_contig35750_v2
HSP 1 
Score: 89.0434 bits (188), Expect = 1.68927e-18
Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = -1
Query:  299 VVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 418
            VVVGIY+SMVVESGLVVVETCTHMV VVGTCSSMVEESGL
Sbjct:  181 VVVGIYSSMVVESGLVVVETCTHMVVVVGTCSSMVEESGL 300

Oall_contig4451_v25.55877e-1787.50%
Oall_contig4451_v2
HSP 1 
Score: 84.0031 bits (177), Expect = 5.55877e-17
Identity = 35/40 (87.50%), Postives = 37/40 (92.50%), Query Frame = -1
Query:  317 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSM 436
            TCTSMLVVVGIY+SMVVESGLVVVETCTHMV VV TC+ M
Sbjct:  181 TCTSMLVVVGIYSSMVVESGLVVVETCTHMVVVVXTCTXM 300

HSP 2 
Score: 63.8419 bits (133), Expect = 6.51774e-11
Identity = 28/43 (65.12%), Postives = 33/43 (76.74%), Query Frame = -1
Query:  299 SMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 427
            S+ VVVG  + MVVES LVVVETCTHM  VVGTC+SM+   G+
Sbjct:   85 SVQVVVGXXSXMVVESXLVVVETCTHMXVVVGTCTSMLVVVGI 213

Oall_contig8152_v27.05595e-1269.77%
Oall_contig8152_v2
HSP 1 
Score: 67.0494 bits (140), Expect = 7.05595e-12
Identity = 30/43 (69.77%), Postives = 30/43 (69.77%), Query Frame = -2
Query:    4 VVGEMHKCRPVVEEISLVGEVICTRMXXXXXXXXXVGICTRKV 132
            VVGEMH CRPVVEEISLVGEVICT M         VG CTR V
Sbjct:  594 VVGEMHXCRPVVEEISLVGEVICTXMAVEVSVPEVVGTCTRMV 722

Oall_contig16936_v25.37296e-1167.50%
Oall_contig16936_v2
HSP 1 
Score: 60.1762 bits (125), Expect = 5.37296e-11
Identity = 27/40 (67.50%), Postives = 29/40 (72.50%), Query Frame = -1
Query:  308 SMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEE 427
            S++VVV      VVES  VVVETCTHMV VVGTC  MVEE
Sbjct:   77 SLVVVVXCTXXXVVESXXVVVETCTHMVVVVGTCXXMVEE 196

HSP 2 
Score: 23.5196 bits (45), Expect = 5.37296e-11
Identity = 5/6 (83.33%), Postives = 5/6 (83.33%), Query Frame = -3
Query:  126 FCRWWW 143
            FC WWW
Sbjct:  269 FCWWWW 286

Blast Hits to Contig V2 RO454

Analysis Date: 11-03-2009 (Blast: AC454_contigs_v2_vs_RO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
RO454_contig17513_v26.60178e-2591.30%
RO454_contig17513_v2
HSP 1 
Score: 97.2911 bits (206), Expect = 6.60178e-25
Identity = 42/46 (91.30%), Postives = 43/46 (93.48%), Query Frame = -1
Query:  299 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 436
            TCTSMLVVVGIY+SMVVESGLVVVETCT MV VVGTCSSMVE SGL
Sbjct:  498 TCTSMLVVVGIYSSMVVESGLVVVETCTRMVVVVGTCSSMVEXSGL 635

HSP 2 
Score: 29.4763 bits (58), Expect = 6.60178e-25
Identity = 17/34 (50.00%), Postives = 20/34 (58.82%), Query Frame = -2
Query:    1 VVEEISLVGEVICTRMXXXXXXXXXVGICTRKVE 102
            VVEEISLV  V CTRM   X    XV +C   ++
Sbjct:  255 VVEEISLVVVVTCTRMVVEXSVQVXVXLCMAHIQ 356

HSP 3 
Score: 23.5196 bits (45), Expect = 6.60178e-25
Identity = 5/6 (83.33%), Postives = 5/6 (83.33%), Query Frame = -3
Query:  126 FCRWWW 143
            FC WWW
Sbjct:  374 FCWWWW 391

HSP 4 
Score: 92.2508 bits (195), Expect = 2.95865e-20
Identity = 39/46 (84.78%), Postives = 42/46 (91.30%), Query Frame = -1
Query:  299 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 436
            TCTSMLVVVGIY+SMVVESGLVVVETCTHMV VVGTC+SMV   G+
Sbjct:  867 TCTSMLVVVGIYSSMVVESGLVVVETCTHMVVVVGTCTSMVVVVGM 1004

HSP 5 
Score: 23.5196 bits (45), Expect = 2.95865e-20
Identity = 5/6 (83.33%), Postives = 5/6 (83.33%), Query Frame = -3
Query:  123 CRWWWG 140
            C WWWG
Sbjct:  605 CWWWWG 622

HSP 6 
Score: 87.2105 bits (184), Expect = 1.70925e-18
Identity = 37/46 (80.43%), Postives = 41/46 (89.13%), Query Frame = -1
Query:  299 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 436
            TCTSMLVVVGIY+SMVVES LVVVETCTHMV VVGTC+SM+   G+
Sbjct:  972 TCTSMLVVVGIYSSMVVESRLVVVETCTHMVVVVGTCTSMLVVVGI 1109

HSP 7 
Score: 22.6031 bits (43), Expect = 1.70925e-18
Identity = 5/9 (55.56%), Postives = 7/9 (77.78%), Query Frame = -3
Query:  108 WWWGRCINV 134
            WWW R ++V
Sbjct:  548 WWWWRLVHV 574

HSP 8 
Score: 84.0031 bits (177), Expect = 3.36256e-17
Identity = 35/46 (76.09%), Postives = 39/46 (84.78%), Query Frame = -1
Query:  299 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 436
            TCT M VVVG Y+SMVVESGLVVVETCTHMV VVGTC+SM+   G+
Sbjct:  603 TCTXMXVVVGXYSSMVVESGLVVVETCTHMVVVVGTCTSMLVVVGI 740

HSP 9 
Score: 68.424 bits (143), Expect = 1.64605e-12
Identity = 32/41 (78.05%), Postives = 33/41 (80.49%), Query Frame = -1
Query:  299 LVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 421
            LVVVGIY+SMVVESGLV V TCT M  VVG  SSMV ESGL
Sbjct:  678 LVVVGIYSSMVVESGLVXVXTCTXMXVVVGXYSSMVVESGL 800

RO454_contig2759_v22.09351e-2293.48%
RO454_contig2759_v2
HSP 1 
Score: 100.04 bits (212), Expect = 2.09351e-22
Identity = 43/46 (93.48%), Postives = 44/46 (95.65%), Query Frame = -1
Query:  299 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 436
            TCTSMLVVVGIY+SMVVESGLVVVETCT MV VVGTCSSMVEESGL
Sbjct:  928 TCTSMLVVVGIYSSMVVESGLVVVETCTRMVVVVGTCSSMVEESGL 1065

HSP 2 
Score: 22.6031 bits (43), Expect = 2.09351e-22
Identity = 5/9 (55.56%), Postives = 7/9 (77.78%), Query Frame = -3
Query:  108 WWWGRCINV 134
            WWW R ++V
Sbjct:  903 WWWWRLVHV 929

RO454_contig26951_v26.99231e-1779.55%
RO454_contig26951_v2
HSP 1 
Score: 80.7956 bits (170), Expect = 6.99231e-17
Identity = 35/44 (79.55%), Postives = 39/44 (88.64%), Query Frame = -1
Query:  299 TSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 430
            TSMLVVVGIY+SMVVES LVVVETCTHMV VVGTC+SM+   G+
Sbjct: 1022 TSMLVVVGIYSSMVVESRLVVVETCTHMVVVVGTCTSMLVVVGI 1153

HSP 2 
Score: 23.0613 bits (44), Expect = 6.99231e-17
Identity = 5/5 (100.00%), Postives = 5/5 (100.00%), Query Frame = -3
Query:  123 RWWWG 137
            RWWWG
Sbjct:  979 RWWWG 993

HSP 3 
Score: 73.0061 bits (153), Expect = 3.51732e-14
Identity = 32/42 (76.19%), Postives = 35/42 (83.33%), Query Frame = -1
Query:  311 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVE 436
            TCTSMLVVVGIY+SMVVES  VVV TCTHMV VVG  + MV+
Sbjct:  929 TCTSMLVVVGIYSSMVVESKQVVVGTCTHMVVVVGMSTCMVQ 1054

HSP 4 
Score: 21.6867 bits (41), Expect = 3.51732e-14
Identity = 5/7 (71.43%), Postives = 5/7 (71.43%), Query Frame = -3
Query:  123 FCRWWWG 143
            F  WWWG
Sbjct:  913 FSWWWWG 933

RO454_contig15018_v24.63515e-1390.32%
RO454_contig15018_v2
HSP 1 
Score: 64.7583 bits (135), Expect = 4.63515e-13
Identity = 28/31 (90.32%), Postives = 29/31 (93.55%), Query Frame = -1
Query:  344 TCTSMLVVVGIYNSMVVESGLVVVETCTHMV 436
            TCTSMLVVVGIY+SMVVES LVVVETCT MV
Sbjct:  144 TCTSMLVVVGIYSSMVVESRLVVVETCTRMV 236

HSP 2 
Score: 23.0613 bits (44), Expect = 4.63515e-13
Identity = 5/5 (100.00%), Postives = 5/5 (100.00%), Query Frame = -3
Query:  123 RWWWG 137
            RWWWG
Sbjct:  113 RWWWG 127

RO454_contig26104_v23.10679e-1269.77%
RO454_contig26104_v2
HSP 1 
Score: 67.5076 bits (141), Expect = 3.10679e-12
Identity = 30/43 (69.77%), Postives = 30/43 (69.77%), Query Frame = -2
Query:    4 VVGEMHKCRPVVEEISLVGEVICTRMXXXXXXXXXVGICTRKV 132
            VVGEMH CRPVVEEISLVGEVICTRM         VG CT  V
Sbjct:  400 VVGEMHNCRPVVEEISLVGEVICTRMAVEVSVPEVVGTCTXMV 528

RO454_contig10888_v25.41655e-1187.10%
RO454_contig10888_v2
HSP 1 
Score: 63.3837 bits (132), Expect = 5.41655e-11
Identity = 27/31 (87.10%), Postives = 28/31 (90.32%), Query Frame = -1
Query:  344 TCTSMLVVVGIYNSMVVESGLVVVETCTHMV 436
            TCTSMLVVVGIY+SMVVE  LVVV TCTHMV
Sbjct:   25 TCTSMLVVVGIYSSMVVEISLVVVGTCTHMV 117

Blast Hits to Contigs V2 WO454

Analysis Date: 11-03-2009 (Blast: AC454_contigs_v2_vs_WO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
WO454_contig19466_v21.52336e-2495.65%
WO454_contig19466_v2
HSP 1 
Score: 103.706 bits (220), Expect = 1.52336e-24
Identity = 44/46 (95.65%), Postives = 45/46 (97.83%), Query Frame = -1
Query:  299 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 436
            TCTSMLVVVGIY+SMVVESGLVVVETCTHMV VVGTCSSMVEESGL
Sbjct: 1227 TCTSMLVVVGIYSSMVVESGLVVVETCTHMVVVVGTCSSMVEESGL 1364

HSP 2 
Score: 26.2688 bits (51), Expect = 1.52336e-24
Identity = 6/7 (85.71%), Postives = 6/7 (85.71%), Query Frame = -3
Query:  123 FCRWWWG 143
            FC WWWG
Sbjct:  563 FCWWWWG 583

HSP 3 
Score: 84.0031 bits (177), Expect = 1.04192e-18
Identity = 36/46 (78.26%), Postives = 40/46 (86.96%), Query Frame = -1
Query:  299 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 436
            TCTSMLVVVGIY+SMVVES LVVV TCTHMV VVGTC+SM+   G+
Sbjct: 1332 TCTSMLVVVGIYSSMVVESRLVVVGTCTHMVVVVGTCTSMLVVVGI 1469

HSP 4 
Score: 26.2688 bits (51), Expect = 1.04192e-18
Identity = 6/7 (85.71%), Postives = 6/7 (85.71%), Query Frame = -3
Query:  123 FCRWWWG 143
            FC WWWG
Sbjct:  497 FCWWWWG 517

HSP 5 
Score: 39.5569 bits (80), Expect = 2.36092e-12
Identity = 18/26 (69.23%), Postives = 20/26 (76.92%), Query Frame = -1
Query:  299 LVVVETCTHMVAVVGTCSSMVEESGL 376
            +VVV TCT M+ VVG  SSMV ESGL
Sbjct: 1302 VVVVGTCTSMLVVVGIYSSMVVESGL 1379

HSP 6 
Score: 39.0986 bits (79), Expect = 2.36092e-12
Identity = 17/24 (70.83%), Postives = 19/24 (79.17%), Query Frame = -1
Query:  365 TCTSMLVVVGIYNSMVVESGLVVV 436
            TCTSMLVVV  Y+SMVVE  + VV
Sbjct: 1668 TCTSMLVVVXXYSSMVVEESVQVV 1739

HSP 7 
Score: 23.0613 bits (44), Expect = 2.36092e-12
Identity = 10/19 (52.63%), Postives = 11/19 (57.89%), Query Frame = -2
Query:   55 CRPVVEEISLVGEVICTRM 111
            C  +VEE  LV    CTRM
Sbjct: 1200 CSSMVEESGLVVVETCTRM 1256

HSP 8 
Score: 22.1449 bits (42), Expect = 2.36092e-12
Identity = 4/9 (44.44%), Postives = 7/9 (77.78%), Query Frame = -3
Query:  108 WWWGRCINV 134
            WWW R +++
Sbjct: 1277 WWWWRLVHI 1303

HSP 9 
Score: 53.7613 bits (111), Expect = 8.89754e-12
Identity = 23/30 (76.67%), Postives = 25/30 (83.33%), Query Frame = -1
Query:  347 TCTSMLVVVGIYNSMVVESGLVVVETCTHM 436
            TCT M+VVVG  +SMV ESGLVVVETCT M
Sbjct: 1200 TCTHMVVVVGTCSSMVEESGLVVVETCTRM 1289

HSP 10 
Score: 27.6434 bits (54), Expect = 8.89754e-12
Identity = 11/25 (44.00%), Postives = 16/25 (64.00%), Query Frame = -1
Query:  299 VVVETCTHMVAVVGTCSSMVEESGL 373
            V + TC  ++ VVGTC+ MV   G+
Sbjct:  531 VGMSTCMVLLVVVGTCTHMVVVVGM 605

HSP 11 
Score: 23.5196 bits (45), Expect = 8.89754e-12
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = -2
Query:  124 STCMVL*VVVG 156
            STCMVL VVVG
Sbjct:  498 STCMVLLVVVG 530

WO454_contig20790_v22.46507e-1773.91%
WO454_contig20790_v2
HSP 1 
Score: 79.421 bits (167), Expect = 2.46507e-17
Identity = 34/46 (73.91%), Postives = 37/46 (80.43%), Query Frame = -1
Query:  299 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVEESGL 436
            TCTSMLVVVG   SM VESGLVVVETCTHM  VVGTC+SM+   G+
Sbjct:   90 TCTSMLVVVGXXXSMXVESGLVVVETCTHMXVVVGTCTSMLVVVGI 227

HSP 2 
Score: 22.6031 bits (43), Expect = 2.46507e-17
Identity = 5/9 (55.56%), Postives = 7/9 (77.78%), Query Frame = -3
Query:  108 WWWGRCINV 134
            WWW R ++V
Sbjct:   35 WWWWRLVHV 61

HSP 3 
Score: 66.5912 bits (139), Expect = 4.37039e-12
Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = -1
Query:  347 TCTSMLVVVGIYNSMVVESGLVVVETCTHM 436
            TCTSMLVVVGIY+SMVVESGLVVVETCT M
Sbjct:   33 TCTSMLVVVGIYSSMVVESGLVVVETCTRM 122

WO454_contig15357_v23.52122e-1782.50%
WO454_contig15357_v2
HSP 1 
Score: 77.5882 bits (163), Expect = 3.52122e-17
Identity = 33/40 (82.50%), Postives = 35/40 (87.50%), Query Frame = -1
Query:  317 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSM 436
            TCTSMLVVVGIY+SMVVESGLVVVETCTHM  VVG  + M
Sbjct:   68 TCTSMLVVVGIYSSMVVESGLVVVETCTHMXVVVGXXTXM 187

HSP 2 
Score: 26.2688 bits (51), Expect = 3.52122e-17
Identity = 6/7 (85.71%), Postives = 6/7 (85.71%), Query Frame = -3
Query:  123 FCRWWWG 143
            FC WWWG
Sbjct:  303 FCWWWWG 323

WO454_contig10662_v21.68506e-1683.33%
WO454_contig10662_v2
HSP 1 
Score: 81.2538 bits (171), Expect = 1.68506e-16
Identity = 35/42 (83.33%), Postives = 37/42 (88.10%), Query Frame = -1
Query:  311 TCTSMLVVVGIYNSMVVESGLVVVETCTHMVAVVGTCSSMVE 436
            TCTSMLVVVGIY+SMVVESGLVVVETCT MV VV TC+ M E
Sbjct:  195 TCTSMLVVVGIYSSMVVESGLVVVETCTRMVVVVETCTRMEE 320

HSP 2 
Score: 40.9315 bits (83), Expect = 5.49181e-13
Identity = 19/26 (73.08%), Postives = 20/26 (76.92%), Query Frame = -1
Query:  299 LVVVETCTHMVAVVGTCSSMVEESGL 376
            LVVV TCT M+ VVG  SSMV ESGL
Sbjct:  258 LVVVGTCTSMLVVVGIYSSMVVESGL 335

HSP 3 
Score: 33.1419 bits (66), Expect = 5.49181e-13
Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = -1
Query:  365 GIYNSMVVESGLVVV 409
            GIY+SMVVESGLVVV
Sbjct:  372 GIYSSMVVESGLVVV 416

HSP 4 
Score: 25.8106 bits (50), Expect = 5.49181e-13
Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = -1
Query:  407 TCTSMLVVVG 436
            TCTSMLVVVG
Sbjct:  415 TCTSMLVVVG 444

HSP 5 
Score: 22.6031 bits (43), Expect = 5.49181e-13
Identity = 5/9 (55.56%), Postives = 7/9 (77.78%), Query Frame = -3
Query:  108 WWWGRCINV 134
            WWW R ++V
Sbjct:  233 WWWWRLVHV 259

WO454_contig8623_v22.07048e-1487.88%
WO454_contig8623_v2
HSP 1 
Score: 70.715 bits (148), Expect = 2.07048e-14
Identity = 29/33 (87.88%), Postives = 31/33 (93.94%), Query Frame = -1
Query:  314 VGIYNSMVVESGLVVVETCTHMVAVVGTCSSMV 412
            VGIY+SMVVESGLVVVETCTHMV VVGTC+ MV
Sbjct:    2 VGIYSSMVVESGLVVVETCTHMVVVVGTCTHMV 100

HSP 2 
Score: 22.1449 bits (42), Expect = 2.07048e-14
Identity = 5/6 (83.33%), Postives = 5/6 (83.33%), Query Frame = -3
Query:  120 RWWWGR 137
            RWWW R
Sbjct:  132 RWWWXR 149

WO454_contig3958_v27.10376e-1474.42%
WO454_contig3958_v2
HSP 1 
Score: 72.5479 bits (152), Expect = 7.10376e-14
Identity = 32/43 (74.42%), Postives = 32/43 (74.42%), Query Frame = -2
Query:    4 VVGEMHKCRPVVEEISLVGEVICTRMXXXXXXXXXVGICTRKV 132
            VVGEMHKCRPVVEEISLVGEVICT M         VGICTR V
Sbjct:  519 VVGEMHKCRPVVEEISLVGEVICTHMAVEVSVPEVVGICTRMV 647

HSP 2 
Score: 65.6747 bits (137), Expect = 8.32733e-12
Identity = 30/44 (68.18%), Postives = 32/44 (72.73%), Query Frame = 2
Query:    2 STLRVQIXXXXXXXXXXXIRVQITSPTREISSTTGLHLCISPTT 133
            +T+RVQI           I VQITSPTREISSTTGLHLCISPTT
Sbjct:  518 TTIRVQIPTTSGTLTSTAI*VQITSPTREISSTTGLHLCISPTT 649

WO454_contig15356_v25.89487e-1195.00%
WO454_contig15356_v2
HSP 1 
Score: 45.9718 bits (94), Expect = 5.89487e-11
Identity = 19/20 (95.00%), Postives = 20/20 (100.00%), Query Frame = -1
Query:  377 TCTSMLVVVGIYNSMVVESG 436
            TCTSMLVVVGIY+SMVVESG
Sbjct: 1156 TCTSMLVVVGIYSSMVVESG 1215

HSP 2 
Score: 28.5598 bits (56), Expect = 5.89487e-11
Identity = 11/22 (50.00%), Postives = 15/22 (68.18%), Query Frame = -1
Query:  308 VVVETCTHMVAVVGTCSSMVEE 373
            V + TC  ++ VVGTC+  VEE
Sbjct: 1008 VGMSTCMVLLVVVGTCTRKVEE 1073

HSP 3 
Score: 21.6867 bits (41), Expect = 5.89487e-11
Identity = 5/7 (71.43%), Postives = 5/7 (71.43%), Query Frame = -3
Query:  123 FCRWWWG 143
            F  WWWG
Sbjct:  869 FXWWWWG 889

HSP 4 
Score: 21.6867 bits (41), Expect = 5.89487e-11
Identity = 12/32 (37.50%), Postives = 13/32 (40.62%), Query Frame = -2
Query:    4 VEEISLVGEVICTRMXXXXXXXXXVGICTRKV 99
            VEE SL     CT M           +CT KV
Sbjct:  609 VEETSLEVGETCTHMVVVENAQVEEVMCTHKV 704

tags