AC454_contig31223_v2
| Name | AC454_contig31223_v2 |
|---|---|
| Accession | ID2156805 |
| Sequence | CACCAACAAAACCATACAAGTACTCATCCCCACCTCCACCCACCACTATT |
| Length | 402 |
| Type | contig |
| Organism | American Chestnut |
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References
| Dababase | Accession |
|---|---|
| GFF_source | SeqManPro |
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Alignment Viewer
ESTs in this contig
| Type | Feature | Position | ||
|---|---|---|---|---|
| EST | ACHS1n_014787_2773_1586 | 0-284 | ||
| microsatellite | AC454_contig31223_v2-ssr119 | 118 | 130 | 0 |
| EST | ACWP1_022604_2820_0916 | 159-402 | ||
| microsatellite | AC454_contig31223_v2-ssr167 | 166 | 178 | 0 |
| microsatellite | AC454_contig31223_v2-ssr254 | 253 | 265 | 0 |
| microsatellite | AC454_contig31223_v2-ssr281 | 280 | 292 | 0 |
| microsatellite | AC454_contig31223_v2-ssr368 | 367 | 379 | 0 |
InterProScan Analysis
Analysis Date: 11-03-2009
(Interpro: AC454_contigs_v2)
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Blast Hits to Contigs V2 CC454
Analysis Date: 11-03-2009 (Blast: AC454_contigs_v2_vs_CC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
CC454_contig19675_v2 | 7.4607e-20 | 64.71% | ||
CC454_contig19675_v2 | ||||
HSP 1 Score: 51.9285 bits (107), Expect = 7.4607e-20 Query: 297 VVTCTRMXXXXXXXXXVGTCTHMVVEVGMSTCMV 398 HSP 2 Score: 50.5539 bits (104), Expect = 7.4607e-20 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 3 Score: 27.6434 bits (54), Expect = 7.4607e-20 Query: 3 WRWG*VLVWFCW 38 HSP 4 Score: 54.2195 bits (112), Expect = 8.42218e-15 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 5 Score: 33.6001 bits (67), Expect = 8.42218e-15 Query: 2 GGGGDEYLYGFVG 40 HSP 6 Score: 24.8942 bits (48), Expect = 8.42218e-15 Query: 321 VTCTRMXXXXXXXXXVGTCTHMVVE 395 HSP 7 Score: 55.1359 bits (114), Expect = 2.4935e-13 Query: 97 TTIRXXXXXXXXXXXXXXILLQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 8 Score: 38.1822 bits (77), Expect = 2.4935e-13 Query: 310 LIPTSTTI*VQVPXXXXXXXXXXIRVQVTT 399 HSP 9 Score: 51.0121 bits (105), Expect = 4.16392e-11 Query: 157 LQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 10 Score: 26.2734 bits (51), Expect = 4.16392e-11 Query: 2 TNKTIQVLIPTST 40 HSP 11 Score: 22.6031 bits (43), Expect = 4.16392e-11 Query: 319 TSTTI*VQVPXXXXXXXXXXIRVQVTT 399 | ||||
CC454_contig26796_v2 | 6.2401e-19 | 88.00% | ||
CC454_contig26796_v2 | ||||
HSP 1 Score: 53.7613 bits (111), Expect = 6.2401e-19 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 2 Score: 41.3897 bits (84), Expect = 6.2401e-19 Query: 297 CTRMXXXXXXXXXVGTCTHMVVEVGMSTCMV 389 HSP 3 Score: 34.0583 bits (68), Expect = 6.2401e-19 Query: 2 GGGGDEYLYGFVG 40 HSP 4 Score: 54.2195 bits (112), Expect = 2.23134e-18 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 5 Score: 47.8046 bits (98), Expect = 2.23134e-18 Query: 291 VVTCTRMXXXXXXXXXVGTCTHMVVEVGMSTCMVQL 398 HSP 6 Score: 23.0613 bits (44), Expect = 2.23134e-18 Query: 9 WRWG*VLVWF 38 HSP 7 Score: 52.8449 bits (109), Expect = 4.12109e-18 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 8 Score: 40.0151 bits (81), Expect = 4.12109e-18 Query: 297 GTCTHMVVEVGMSTCMV 347 HSP 9 Score: 31.3091 bits (62), Expect = 4.12109e-18 Query: 2 GGGGDEYLYGFVG 40 HSP 10 Score: 53.3031 bits (110), Expect = 4.5669e-17 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 11 Score: 41.3897 bits (84), Expect = 4.5669e-17 Query: 297 VVTCTRMXXXXXXXXXVGTCTHMVVEVGMSTCMV 398 HSP 12 Score: 28.1016 bits (55), Expect = 4.5669e-17 Query: 3 WRWG*VLVWFCW 38 HSP 13 Score: 56.9688 bits (118), Expect = 3.88094e-14 Query: 151 ILLQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 14 Score: 30.3927 bits (60), Expect = 3.88094e-14 Query: 310 LIPTSTTI*VQVPXXXXXXXXXXIRVQVTT 399 HSP 15 Score: 25.3613 bits (49), Expect = 3.88094e-14 Query: 2 TNKTIQVLIPTST 40 HSP 16 Score: 51.9285 bits (107), Expect = 3.70343e-12 Query: 151 ILLQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 17 Score: 28.5598 bits (56), Expect = 3.70343e-12 Query: 310 LIPTSTTI*VQVPXXXXXXXXXXIRVQVTT 399 HSP 18 Score: 25.3613 bits (49), Expect = 3.70343e-12 Query: 2 TNKTIQVLIPTST 40 HSP 19 Score: 51.4703 bits (106), Expect = 5.38669e-11 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 20 Score: 31.3091 bits (62), Expect = 5.38669e-11 Query: 2 GGGGDEYLYGFVG 40 | ||||
CC454_contig31403_v2 | 4.67917e-15 | 92.00% | ||
CC454_contig31403_v2 | ||||
HSP 1 Score: 58.8016 bits (122), Expect = 4.67917e-15 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 2 Score: 31.7673 bits (63), Expect = 4.67917e-15 Query: 294 GTCTHMVVEVGMSTCMVQ 347 HSP 3 Score: 23.0613 bits (44), Expect = 4.67917e-15 Query: 9 WRWG*VLVWF 38 HSP 4 Score: 58.3434 bits (121), Expect = 1.15678e-11 Query: 151 ILLQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 5 Score: 26.727 bits (52), Expect = 1.15678e-11 Query: 313 IPTSTTI*VQVP 348 | ||||
CC454_contig3732_v2 | 1.81695e-13 | 91.67% | ||
CC454_contig3732_v2 | ||||
HSP 1 Score: 55.5941 bits (115), Expect = 1.81695e-13 Query: 159 TCTHMVVEVGMSTCMVLLVVVGIC 230 HSP 2 Score: 27.1852 bits (53), Expect = 1.81695e-13 Query: 291 VEVGMSTCMVQL 326 HSP 3 Score: 25.3524 bits (49), Expect = 1.81695e-13 Query: 3 WRWG*VLVWFCW 38 | ||||
CC454_contig25315_v2 | 2.89639e-11 | 94.12% | ||
CC454_contig25315_v2 | ||||
HSP 1 Score: 42.3061 bits (86), Expect = 2.89639e-11 Query: 297 GTCTHMVVEVGMSTCMV 347 HSP 2 Score: 32.2255 bits (64), Expect = 2.89639e-11 Query: 174 GTCTHMVVEVGMSTCMVLLV 233 HSP 3 Score: 23.9778 bits (46), Expect = 2.89639e-11 Query: 11 GGGGDEYLYG 40 | ||||
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Blast Hits to Contigs V2 CCall
Analysis Date: 11-03-2009 (Blast: AC454_contigs_v2_vs_CCall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
CCall_contig17369_v2 | 4.17493e-22 | 88.00% | ||
CCall_contig17369_v2 | ||||
HSP 1 Score: 55.1359 bits (114), Expect = 4.17493e-22 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 2 Score: 48.2628 bits (99), Expect = 4.17493e-22 Query: 291 CTRMXXXXXXXXXVGTCTHMVVEVGMSTCMVQL 389 HSP 3 Score: 34.5166 bits (69), Expect = 4.17493e-22 Query: 2 GGGGDEYLYGFVG 40 HSP 4 Score: 53.7613 bits (111), Expect = 1.90331e-21 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 5 Score: 48.721 bits (100), Expect = 1.90331e-21 Query: 291 VVTCTRMXXXXXXXXXVGTCTHMVVEVGMSTCMVQL 398 HSP 6 Score: 36.3494 bits (73), Expect = 1.90331e-21 Query: 3 WRWG*VLVWFCW 38 HSP 7 Score: 55.5941 bits (115), Expect = 3.43101e-21 Query: 159 TCTHMVVEVGMSTCMVLLVVVGIC 230 HSP 8 Score: 44.1389 bits (90), Expect = 3.43101e-21 Query: 291 GTCTHMVVEVGMSTCMVQL 347 HSP 9 Score: 33.6001 bits (67), Expect = 3.43101e-21 Query: 3 WRWG*VLVWFCW 38 HSP 10 Score: 21.6867 bits (41), Expect = 3.43101e-21 Query: 327 VVTCTRMXXXXXXXXXVGTCTHMV 398 HSP 11 Score: 55.5941 bits (115), Expect = 5.54025e-16 Query: 159 TCTHMVVEVGMSTCMVLLVVVGIC 230 HSP 12 Score: 41.3897 bits (84), Expect = 5.54025e-16 Query: 297 CTRMXXXXXXXXXVGTCTHMVVEVGMSTCMV 389 HSP 13 Score: 23.0613 bits (44), Expect = 5.54025e-16 Query: 9 WRWG*VLVWF 38 HSP 14 Score: 55.1359 bits (114), Expect = 5.37651e-14 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 15 Score: 36.3494 bits (73), Expect = 5.37651e-14 Query: 3 WRWG*VLVWFCW 38 HSP 16 Score: 21.6867 bits (41), Expect = 5.37651e-14 Query: 291 MSTCMVQL 314 HSP 17 Score: 56.9688 bits (118), Expect = 5.55517e-14 Query: 151 ILLQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 18 Score: 28.5598 bits (56), Expect = 5.55517e-14 Query: 310 LIPTSTTI*VQVPXXXXXXXXXXIRVQVTT 399 HSP 19 Score: 27.6415 bits (54), Expect = 5.55517e-14 Query: 2 TNKTIQVLIPTST 40 HSP 20 Score: 53.3031 bits (110), Expect = 1.76475e-11 Query: 151 ILLQIPTTTNKTIQVLIPTSTTI*VQV 231 HSP 21 Score: 25.3613 bits (49), Expect = 1.76475e-11 Query: 2 TNKTIQVLIPTST 40 HSP 22 Score: 22.6031 bits (43), Expect = 1.76475e-11 Query: 310 LIPTSTTI*VQVP 348 HSP 23 Score: 55.1359 bits (114), Expect = 3.8345e-11 Query: 151 ILLQIPTTTNKTIQVLIPTSTTI*VQV 231 HSP 24 Score: 30.3927 bits (60), Expect = 3.8345e-11 Query: 310 LIPTSTTI*VQVPXXXXXXXXXXIRVQVTT 399 | ||||
CCall_contig3850_v2 | 3.66986e-19 | 88.00% | ||
CCall_contig3850_v2 | ||||
HSP 1 Score: 53.7613 bits (111), Expect = 3.66986e-19 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 2 Score: 46.8882 bits (96), Expect = 3.66986e-19 Query: 291 TCTHMVVEVGMSTCMVQL 344 HSP 3 Score: 27.1852 bits (53), Expect = 3.66986e-19 Query: 3 WRWG*VLVWFCW 38 HSP 4 Score: 55.5941 bits (115), Expect = 1.24225e-18 Query: 159 TCTHMVVEVGMSTCMVLLVVVGIC 230 HSP 5 Score: 38.1822 bits (77), Expect = 1.24225e-18 Query: 297 GTCTHMVVEVGMSTCMV 347 HSP 6 Score: 34.5166 bits (69), Expect = 1.24225e-18 Query: 2 GGGGDEYLYGFVG 40 HSP 7 Score: 55.1359 bits (114), Expect = 1.18836e-12 Query: 151 ILLQIPTTTNKTIQVLIPTSTTI*VQV 231 HSP 8 Score: 26.2734 bits (51), Expect = 1.18836e-12 Query: 2 TNKTIQVLIPTST 40 HSP 9 Score: 26.2688 bits (51), Expect = 1.18836e-12 Query: 310 LIPTSTTI*VQVP 348 HSP 10 Score: 56.9688 bits (118), Expect = 3.04281e-11 Query: 151 ILLQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 11 Score: 26.727 bits (52), Expect = 3.04281e-11 Query: 310 LIPTSTTI*VQV 345 | ||||
CCall_contig6670_v2 | 4.48913e-19 | 64.71% | ||
CCall_contig6670_v2 | ||||
HSP 1 Score: 51.9285 bits (107), Expect = 4.48913e-19 Query: 297 VVTCTRMXXXXXXXXXVGTCTHMVVEVGMSTCMV 398 HSP 2 Score: 48.721 bits (100), Expect = 4.48913e-19 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 3 Score: 27.1852 bits (53), Expect = 4.48913e-19 Query: 3 WRWG*VLVWFCW 38 HSP 4 Score: 22.1449 bits (42), Expect = 4.48913e-19 Query: 39 MVVWRVYKVGWLGDLRYSNSGG 104 HSP 5 Score: 54.2195 bits (112), Expect = 8.65144e-15 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 6 Score: 33.6001 bits (67), Expect = 8.65144e-15 Query: 2 GGGGDEYLYGFVG 40 HSP 7 Score: 24.8942 bits (48), Expect = 8.65144e-15 Query: 321 VTCTRMXXXXXXXXXVGTCTHMVVE 395 HSP 8 Score: 51.0121 bits (105), Expect = 1.73141e-11 Query: 157 LQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 9 Score: 27.6415 bits (54), Expect = 1.73141e-11 Query: 2 TNKTIQVLIPTST 40 HSP 10 Score: 22.6031 bits (43), Expect = 1.73141e-11 Query: 319 TSTTI*VQVPXXXXXXXXXXIRVQVTT 399 HSP 11 Score: 47.3464 bits (97), Expect = 6.44243e-11 Query: 151 ILLQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 12 Score: 38.1822 bits (77), Expect = 6.44243e-11 Query: 310 LIPTSTTI*VQVPXXXXXXXXXXIRVQVTT 399 | ||||
CCall_contig42467_v2 | 1.52609e-14 | 84.00% | ||
CCall_contig42467_v2 | ||||
HSP 1 Score: 51.4703 bits (106), Expect = 1.52609e-14 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 2 Score: 32.6837 bits (65), Expect = 1.52609e-14 Query: 294 GTCTHMVVEVGMSTCMVQ 347 HSP 3 Score: 25.3524 bits (49), Expect = 1.52609e-14 Query: 3 WRWG*VLVWFCW 38 HSP 4 Score: 54.6777 bits (113), Expect = 6.81247e-11 Query: 151 ILLQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 5 Score: 26.727 bits (52), Expect = 6.81247e-11 Query: 313 IPTSTTI*VQVP 348 | ||||
CCall_contig24999_v2 | 7.21589e-12 | 94.12% | ||
CCall_contig24999_v2 | ||||
HSP 1 Score: 42.3061 bits (86), Expect = 7.21589e-12 Query: 297 GTCTHMVVEVGMSTCMV 347 HSP 2 Score: 30.3927 bits (60), Expect = 7.21589e-12 Query: 174 GTCTHMVVEVGMSTCMVLLV 233 HSP 3 Score: 29.9345 bits (59), Expect = 7.21589e-12 Query: 11 GGWGTLGTPIVVGGGGDEYLYG 76 | ||||
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Blast Hits to Contig V2 Oall
Analysis Date: 11-03-2009 (Blast: AC454_contigs_v2_vs_Oall_contigs_v2)
Best 10 Hits Shown | Show Best 25 Hits
Note: Click a description for more details.
Best 10 Hits Shown | Show Best 25 Hits
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
Oall_contig7527_v2 | 2.97867e-25 | 96.00% | ||
Oall_contig7527_v2 | ||||
HSP 1 Score: 61.0927 bits (127), Expect = 2.97867e-25 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 2 Score: 52.8449 bits (109), Expect = 2.97867e-25 Query: 291 CTRMXXXXXXXXXVGTCTHMVVEVGMSTCMVQL 389 HSP 3 Score: 38.1822 bits (77), Expect = 2.97867e-25 Query: 3 WRWG*VLVWFCW 38 HSP 4 Score: 56.5106 bits (117), Expect = 1.21221e-23 Query: 291 VVTCTRMXXXXXXXXXVGTCTHMVVEVGMSTCMVQL 398 HSP 5 Score: 52.8449 bits (109), Expect = 1.21221e-23 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 6 Score: 37.2658 bits (75), Expect = 1.21221e-23 Query: 2 GGGGDEYLYGFVG 40 HSP 7 Score: 56.0524 bits (116), Expect = 6.7427e-20 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 8 Score: 44.1389 bits (90), Expect = 6.7427e-20 Query: 291 GTCTHMVVEVGMSTCMVQL 347 HSP 9 Score: 33.6001 bits (67), Expect = 6.7427e-20 Query: 2 GGGGDEYLYGFVG 40 HSP 10 Score: 61.0927 bits (127), Expect = 3.873e-19 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 11 Score: 40.9315 bits (83), Expect = 3.873e-19 Query: 3 WRWG*VLVWFCW 38 HSP 12 Score: 25.3524 bits (49), Expect = 3.873e-19 Query: 321 VTCTRMXXXXXXXXXVGTCTHMVVE 395 HSP 13 Score: 53.3031 bits (110), Expect = 5.22418e-17 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 14 Score: 43.6807 bits (89), Expect = 5.22418e-17 Query: 291 GTCTHMVVEVGMSTCMVQL 347 HSP 15 Score: 23.0613 bits (44), Expect = 5.22418e-17 Query: 9 WRWG*VLVWF 38 HSP 16 Score: 57.427 bits (119), Expect = 2.73287e-16 Query: 157 LQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 17 Score: 36.8076 bits (74), Expect = 2.73287e-16 Query: 310 LIPTSTTI*VQVPXXXXXXXXXXIRVQVTT 399 HSP 18 Score: 27.1855 bits (53), Expect = 2.73287e-16 Query: 5 NKTIQVLIPTST 40 HSP 19 Score: 55.1359 bits (114), Expect = 8.11181e-14 Query: 97 TTIRXXXXXXXXXXXXXXILLQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 20 Score: 31.7459 bits (63), Expect = 8.11181e-14 Query: 2 TNKTIQVLIPTST 40 HSP 21 Score: 22.1449 bits (42), Expect = 8.11181e-14 Query: 319 TSTTI*VQVPXXXXXXXXXXIRVQVTT 399 HSP 22 Score: 52.3867 bits (108), Expect = 8.85103e-14 Query: 157 LQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 23 Score: 37.2658 bits (75), Expect = 8.85103e-14 Query: 310 LIPTSTTI*VQVPXXXXXXXXXXIRVQVTT 399 HSP 24 Score: 23.0811 bits (44), Expect = 8.85103e-14 Query: 5 NKTIQVLIPTST 40 | ||||
Oall_contig37149_v2 | 6.63186e-25 | 84.00% | ||
Oall_contig37149_v2 | ||||
HSP 1 Score: 52.3867 bits (108), Expect = 6.63186e-25 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 2 Score: 43.6807 bits (89), Expect = 6.63186e-25 Query: 291 TCTHMVVEVGMSTCMVQL 344 HSP 3 Score: 37.2658 bits (75), Expect = 6.63186e-25 Query: 2 GGGGDEYLYGFVG 40 HSP 4 Score: 30.8509 bits (61), Expect = 6.63186e-25 Query: 324 VVTCTRMXXXXXXXXXVGTCTHMVV 398 HSP 5 Score: 55.1359 bits (114), Expect = 5.27637e-19 Query: 159 TCTHMVVEVGMSTCMVLLVVVGIC 230 HSP 6 Score: 41.3897 bits (84), Expect = 5.27637e-19 Query: 291 GTCTHMVVEVGMSTCMVQL 347 HSP 7 Score: 34.0583 bits (68), Expect = 5.27637e-19 Query: 2 GGGGDEYLYGFVG 40 HSP 8 Score: 55.5941 bits (115), Expect = 8.33853e-18 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 9 Score: 46.8882 bits (96), Expect = 8.33853e-18 Query: 291 VVTCTRMXXXXXXXXXVGTCTHMVVEVGMSTCMVQL 398 HSP 10 Score: 23.9778 bits (46), Expect = 8.33853e-18 Query: 11 GGGGDEYLYG 40 HSP 11 Score: 58.3434 bits (121), Expect = 1.11331e-15 Query: 159 TCTHMVVEVGMSTCMVLLVVVGIC 230 HSP 12 Score: 37.2658 bits (75), Expect = 1.11331e-15 Query: 3 WRWG*VLVWFCW 38 HSP 13 Score: 23.5196 bits (45), Expect = 1.11331e-15 Query: 321 GTCTHMVVE 347 HSP 14 Score: 53.7613 bits (111), Expect = 1.48678e-13 Query: 151 ILLQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 15 Score: 30.3778 bits (60), Expect = 1.48678e-13 Query: 2 TNKTIQVLIPTST 40 HSP 16 Score: 23.9778 bits (46), Expect = 1.48678e-13 Query: 310 LIPTSTTI*VQV 345 HSP 17 Score: 54.2195 bits (112), Expect = 1.70807e-12 Query: 154 LLQIPTTTNKTIQVLIPTSTTI*VQV 231 HSP 18 Score: 27.6415 bits (54), Expect = 1.70807e-12 Query: 2 TNKTIQVLIPTST 40 HSP 19 Score: 26.2688 bits (51), Expect = 1.70807e-12 Query: 313 IPTSTTI*VQVP 348 HSP 20 Score: 56.5106 bits (117), Expect = 6.61149e-11 Query: 151 ILLQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 21 Score: 28.1016 bits (55), Expect = 6.61149e-11 Query: 310 LIPTSTTI*VQVPXXXXXXXXXXIRVQVTT 399 | ||||
Oall_contig31528_v2 | 6.04769e-24 | 95.83% | ||
Oall_contig31528_v2 | ||||
HSP 1 Score: 56.0524 bits (116), Expect = 6.04769e-24 Query: 162 GTCTHMVVEVGMSTCMVLLVVVGI 233 HSP 2 Score: 55.1359 bits (114), Expect = 6.04769e-24 Query: 291 TCTRMXXXXXXXXXVGTCTHMVVEVGMSTCMVQL 392 HSP 3 Score: 32.6837 bits (65), Expect = 6.04769e-24 Query: 3 WRWG*VLVWFCW 38 HSP 4 Score: 58.8016 bits (122), Expect = 6.27803e-17 Query: 151 ILLQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 5 Score: 35.433 bits (71), Expect = 6.27803e-17 Query: 310 LIPTSTTI*VQVPXXXXXXXXXXIRVQV 393 HSP 6 Score: 27.6415 bits (54), Expect = 6.27803e-17 Query: 2 TNKTIQVLIPTST 40 HSP 7 Score: 58.8016 bits (122), Expect = 5.48294e-15 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 8 Score: 37.2658 bits (75), Expect = 5.48294e-15 Query: 2 GGGGDEYLYGFVG 40 HSP 9 Score: 50.0956 bits (103), Expect = 1.90126e-14 Query: 291 VVTCTRMXXXXXXXXXVGTCTHMVVEVGMSTCMVQL 398 HSP 10 Score: 44.1389 bits (90), Expect = 1.90126e-14 Query: 168 TCTHMVVEVGMSTCMVLLVVV 230 HSP 11 Score: 51.9285 bits (107), Expect = 6.15664e-11 Query: 157 LQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 12 Score: 30.3778 bits (60), Expect = 6.15664e-11 Query: 2 TNKTIQVLIPTST 40 | ||||
Oall_contig7516_v2 | 9.8916e-22 | 88.00% | ||
Oall_contig7516_v2 | ||||
HSP 1 Score: 55.5941 bits (115), Expect = 9.8916e-22 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 2 Score: 46.43 bits (95), Expect = 9.8916e-22 Query: 291 GTCTHMVVEVGMSTCMVQL 347 HSP 3 Score: 37.2658 bits (75), Expect = 9.8916e-22 Query: 2 GGGGDEYLYGFVG 40 HSP 4 Score: 60.1762 bits (125), Expect = 4.55017e-20 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 5 Score: 48.2628 bits (99), Expect = 4.55017e-20 Query: 291 VVTCTRMXXXXXXXXXVGTCTHMVVEVGMSTCMVQL 398 HSP 6 Score: 22.1449 bits (42), Expect = 4.55017e-20 Query: 9 WRWG*VLVWF 38 HSP 7 Score: 57.427 bits (119), Expect = 5.69627e-14 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 8 Score: 37.2658 bits (75), Expect = 5.69627e-14 Query: 3 WRWG*VLVWFCW 38 HSP 9 Score: 54.6777 bits (113), Expect = 6.02835e-14 Query: 154 LLQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 10 Score: 30.3778 bits (60), Expect = 6.02835e-14 Query: 2 TNKTIQVLIPTST 40 HSP 11 Score: 24.436 bits (47), Expect = 6.02835e-14 Query: 319 TSTTI*VQVPXXXXXXXXXXIRVQVTT 399 HSP 12 Score: 61.5509 bits (128), Expect = 5.10865e-13 Query: 151 ILLQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 13 Score: 29.9345 bits (59), Expect = 5.10865e-13 Query: 313 IPTSTTI*VQVPXXXXXXXXXXIRVQVTT 399 | ||||
Oall_contig35750_v2 | 2.0237e-21 | 92.00% | ||
Oall_contig35750_v2 | ||||
HSP 1 Score: 57.8852 bits (120), Expect = 2.0237e-21 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 2 Score: 53.3031 bits (110), Expect = 2.0237e-21 Query: 291 VVTCTRMXXXXXXXXXVGTCTHMVVEVGMSTCMVQL 398 HSP 3 Score: 23.9778 bits (46), Expect = 2.0237e-21 Query: 11 GGGGDEYLYG 40 HSP 4 Score: 58.3434 bits (121), Expect = 5.83425e-20 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 5 Score: 44.1389 bits (90), Expect = 5.83425e-20 Query: 291 GTCTHMVVEVGMSTCMVQL 347 HSP 6 Score: 34.0583 bits (68), Expect = 5.83425e-20 Query: 2 GGGGDEYLYGFVG 40 HSP 7 Score: 57.8852 bits (120), Expect = 2.5974e-13 Query: 151 ILLQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 8 Score: 28.1016 bits (55), Expect = 2.5974e-13 Query: 310 LIPTSTTI*VQVP 348 HSP 9 Score: 27.6415 bits (54), Expect = 2.5974e-13 Query: 2 TNKTIQVLIPTST 40 HSP 10 Score: 56.0524 bits (116), Expect = 5.26156e-12 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 11 Score: 33.6001 bits (67), Expect = 5.26156e-12 Query: 3 WRWG*VLVWFCW 38 HSP 12 Score: 53.3031 bits (110), Expect = 1.35947e-11 Query: 157 LQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 13 Score: 34.9748 bits (70), Expect = 1.35947e-11 Query: 310 LIPTSTTI*VQVPXXXXXXXXXXIRVQVTT 399 | ||||
Oall_contig21810_v2 | 7.22466e-21 | 84.00% | ||
Oall_contig21810_v2 | ||||
HSP 1 Score: 53.7613 bits (111), Expect = 7.22466e-21 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 2 Score: 46.43 bits (95), Expect = 7.22466e-21 Query: 291 VVTCTRMXXXXXXXXXVGTCTHMVVEVGMSTCMVQL 398 HSP 3 Score: 37.2658 bits (75), Expect = 7.22466e-21 Query: 2 GGGGDEYLYGFVG 40 HSP 4 Score: 51.4703 bits (106), Expect = 1.56274e-19 Query: 165 GTCTHMVVEVGMSTCMVLLVVVG 233 HSP 5 Score: 44.1389 bits (90), Expect = 1.56274e-19 Query: 291 GTCTHMVVEVGMSTCMVQL 347 HSP 6 Score: 37.2658 bits (75), Expect = 1.56274e-19 Query: 3 WRWG*VLVWFCW 38 HSP 7 Score: 51.4703 bits (106), Expect = 2.8236e-13 Query: 151 ILLQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 8 Score: 31.2898 bits (62), Expect = 2.8236e-13 Query: 2 TNKTIQVLIPTSTHHYWS 55 HSP 9 Score: 28.5598 bits (56), Expect = 2.8236e-13 Query: 310 LIPTSTTI*VQVP 348 HSP 10 Score: 57.427 bits (119), Expect = 9.95309e-13 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 11 Score: 33.6001 bits (67), Expect = 9.95309e-13 Query: 3 WRWG*VLVWFCW 38 HSP 12 Score: 57.427 bits (119), Expect = 5.6951e-11 Query: 151 ILLQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 13 Score: 27.6415 bits (54), Expect = 5.6951e-11 Query: 2 TNKTIQVLIPTST 40 | ||||
Oall_contig15641_v2 | 1.29037e-19 | 92.00% | ||
Oall_contig15641_v2 | ||||
HSP 1 Score: 57.8852 bits (120), Expect = 1.29037e-19 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 2 Score: 46.43 bits (95), Expect = 1.29037e-19 Query: 291 GTCTHMVVEVGMSTCMVQL 347 HSP 3 Score: 26.2688 bits (51), Expect = 1.29037e-19 Query: 11 GGGGDEYLYG 40 HSP 4 Score: 61.0927 bits (127), Expect = 1.16161e-15 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 5 Score: 37.2658 bits (75), Expect = 1.16161e-15 Query: 2 GGGGDEYLYGFVG 40 HSP 6 Score: 57.427 bits (119), Expect = 1.50384e-12 Query: 157 LQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 7 Score: 30.3778 bits (60), Expect = 1.50384e-12 Query: 2 TNKTIQVLIPTST 40 HSP 8 Score: 56.0524 bits (116), Expect = 5.14372e-12 Query: 157 LQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 9 Score: 29.9345 bits (59), Expect = 5.14372e-12 Query: 310 LIPTSTTI*VQVP 348 | ||||
Oall_contig37550_v2 | 4.1692e-18 | 88.00% | ||
Oall_contig37550_v2 | ||||
HSP 1 Score: 56.0524 bits (116), Expect = 4.1692e-18 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 2 Score: 41.3897 bits (84), Expect = 4.1692e-18 Query: 291 CTHMVVEVGMSTCMVQL 341 HSP 3 Score: 23.0613 bits (44), Expect = 4.1692e-18 Query: 9 WRWG*VLVWF 38 HSP 4 Score: 49.6374 bits (102), Expect = 8.17511e-12 Query: 168 CTHMVVEVGMSTCMVLLVVV 227 HSP 5 Score: 34.0583 bits (68), Expect = 8.17511e-12 Query: 3 WRWG*VLVWFCW 38 | ||||
Oall_contig39032_v2 | 1.35105e-17 | 92.00% | ||
Oall_contig39032_v2 | ||||
HSP 1 Score: 57.8852 bits (120), Expect = 1.35105e-17 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 2 Score: 37.2658 bits (75), Expect = 1.35105e-17 Query: 2 GGGGDEYLYGFVG 40 HSP 3 Score: 28.5598 bits (56), Expect = 1.35105e-17 Query: 297 TCTHMVVEVGMSTCMV 344 HSP 4 Score: 48.721 bits (100), Expect = 2.4935e-17 Query: 159 HMVVEVGMSTCMVLLVVVGIC 221 HSP 5 Score: 46.8882 bits (96), Expect = 2.4935e-17 Query: 291 GTCTHMVVEVGMSTCMVQL 347 HSP 6 Score: 27.1852 bits (53), Expect = 2.4935e-17 Query: 3 WRWG*VLVWFCW 38 HSP 7 Score: 56.5106 bits (117), Expect = 1.18729e-14 Query: 151 ILLQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 8 Score: 34.0261 bits (68), Expect = 1.18729e-14 Query: 2 TNKTIQVLIPTSTHHYW 52 HSP 9 Score: 23.0613 bits (44), Expect = 1.18729e-14 Query: 313 IPTSTTI*VQV 345 | ||||
Oall_contig21813_v2 | 2.17753e-16 | 67.65% | ||
Oall_contig21813_v2 | ||||
HSP 1 Score: 52.8449 bits (109), Expect = 2.17753e-16 Query: 291 TCTRMXXXXXXXXXVGTCTHMVVEVGMSTCMVQL 392 HSP 2 Score: 42.3061 bits (86), Expect = 2.17753e-16 Query: 183 GTCTHMVVEVGMSTCMV 233 HSP 3 Score: 23.0613 bits (44), Expect = 2.17753e-16 Query: 9 WRWG*VLVWF 38 HSP 4 Score: 52.8449 bits (109), Expect = 4.49763e-11 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 5 Score: 29.9345 bits (59), Expect = 4.49763e-11 Query: 11 GGGGDEYLYG 40 | ||||
Loading...

Blast Hits to Contig V2 RO454
Analysis Date: 11-03-2009 (Blast: AC454_contigs_v2_vs_RO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
RO454_contig27408_v2 | 9.21309e-26 | 88.00% | ||
RO454_contig27408_v2 | ||||
HSP 1 Score: 55.5941 bits (115), Expect = 9.21309e-26 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 2 Score: 55.1359 bits (114), Expect = 9.21309e-26 Query: 291 TCTRMXXXXXXXXXVGTCTHMVVEVGMSTCMVQL 392 HSP 3 Score: 40.9315 bits (83), Expect = 9.21309e-26 Query: 3 WRWG*VLVWFCW 38 HSP 4 Score: 61.0927 bits (127), Expect = 2.32701e-23 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 5 Score: 49.6374 bits (102), Expect = 2.32701e-23 Query: 291 VVTCTRMXXXXXXXXXVGTCTHMVVEVGMSTCMVQL 398 HSP 6 Score: 30.3927 bits (60), Expect = 2.32701e-23 Query: 3 WRWG*VLVWFCW 38 HSP 7 Score: 56.9688 bits (118), Expect = 9.40484e-22 Query: 291 VTCTRMXXXXXXXXXVGTCTHMVVEVGMSTCMVQL 395 HSP 8 Score: 52.3867 bits (108), Expect = 9.40484e-22 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 9 Score: 26.2688 bits (51), Expect = 9.40484e-22 Query: 3 G*VLVWFCW 29 HSP 10 Score: 54.2195 bits (112), Expect = 6.39529e-17 Query: 97 TTIRXXXXXXXXXXXXXXILLQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 11 Score: 35.433 bits (71), Expect = 6.39529e-17 Query: 310 LIPTSTTI*VQVPXXXXXXXXXXIRVQV 393 HSP 12 Score: 31.7459 bits (63), Expect = 6.39529e-17 Query: 2 TNKTIQVLIPTST 40 HSP 13 Score: 49.1792 bits (101), Expect = 3.31341e-15 Query: 177 GTCTHMVVEVGMSTCMVLL 233 HSP 14 Score: 46.8882 bits (96), Expect = 3.31341e-15 Query: 291 TCTRMXXXXXXXXXVGTCTHMVVEVGMSTCMVQL 392 HSP 15 Score: 58.8016 bits (122), Expect = 8.41988e-15 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 16 Score: 35.8912 bits (72), Expect = 8.41988e-15 Query: 3 WRWG*VLVWFCW 38 HSP 17 Score: 53.7613 bits (111), Expect = 2.08336e-14 Query: 151 ILLQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 18 Score: 34.9748 bits (70), Expect = 2.08336e-14 Query: 310 LIPTSTTI*VQVPXXXXXXXXXXIRVQVT 396 HSP 19 Score: 23.9778 bits (46), Expect = 2.08336e-14 Query: 1 HQQNHTST 24 HSP 20 Score: 56.5106 bits (117), Expect = 3.98063e-14 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 21 Score: 35.8912 bits (72), Expect = 3.98063e-14 Query: 6 WRWG*VLVWFC 38 HSP 22 Score: 51.0121 bits (105), Expect = 2.1255e-12 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 23 Score: 37.2658 bits (75), Expect = 2.1255e-12 Query: 2 GGGGDEYLYGFVG 40 HSP 24 Score: 54.6777 bits (113), Expect = 2.95857e-12 Query: 157 LQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 25 Score: 33.1419 bits (66), Expect = 2.95857e-12 Query: 310 LIPTSTTI*VQVPXXXXXXXXXXIRVQVTT 399 HSP 26 Score: 53.3031 bits (110), Expect = 2.7209e-11 Query: 97 TTIRXXXXXXXXXXXXXXILLQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 27 Score: 29.4657 bits (58), Expect = 2.7209e-11 Query: 5 NKTIQVLIPTST 40 | ||||
RO454_contig17513_v2 | 1.68204e-22 | 88.00% | ||
RO454_contig17513_v2 | ||||
HSP 1 Score: 53.3031 bits (110), Expect = 1.68204e-22 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 2 Score: 50.0956 bits (103), Expect = 1.68204e-22 Query: 291 VVTCTRMXXXXXXXXXVGTCTHMVVEVGMSTCMVQL 398 HSP 3 Score: 38.1822 bits (77), Expect = 1.68204e-22 Query: 3 WRWG*VLVWFCW 38 HSP 4 Score: 60.1762 bits (125), Expect = 9.20876e-21 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 5 Score: 41.3897 bits (84), Expect = 9.20876e-21 Query: 291 GTCTHMVVEVGMSTCMVQL 347 HSP 6 Score: 34.0583 bits (68), Expect = 9.20876e-21 Query: 2 GGGGDEYLYGFVG 40 HSP 7 Score: 54.2195 bits (112), Expect = 1.14627e-14 Query: 159 TCTHMVVEVGMSTCMVLLVVVGIC 230 HSP 8 Score: 42.3061 bits (86), Expect = 1.14627e-14 Query: 291 GTCTHMVVEVGMSTCMVQL 347 HSP 9 Score: 55.1359 bits (114), Expect = 2.21586e-14 Query: 151 ILLQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 10 Score: 31.7673 bits (63), Expect = 2.21586e-14 Query: 310 LIPTSTTI*VQVPXXXXXXXXXXIRVQVTT 399 HSP 11 Score: 26.7294 bits (52), Expect = 2.21586e-14 Query: 2 TNKTIQVLIPTST 40 HSP 12 Score: 52.3867 bits (108), Expect = 1.01579e-13 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 13 Score: 37.2658 bits (75), Expect = 1.01579e-13 Query: 2 GGGGDEYLYGFVG 40 HSP 14 Score: 21.6867 bits (41), Expect = 1.01579e-13 Query: 291 MSTCMVQL 314 HSP 15 Score: 61.5509 bits (128), Expect = 1.86529e-13 Query: 151 ILLQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 16 Score: 24.8942 bits (48), Expect = 1.86529e-13 Query: 316 PTSTTI*VQVP 348 HSP 17 Score: 23.9778 bits (46), Expect = 1.86529e-13 Query: 1 HQQNHTST 24 HSP 18 Score: 35.433 bits (71), Expect = 5.42404e-11 Query: 159 TCTHMVVEVGMSTCMVLLVVVGIC 230 HSP 19 Score: 29.0181 bits (57), Expect = 5.42404e-11 Query: 1 VEVGMSTCMVLLV 39 HSP 20 Score: 28.5598 bits (56), Expect = 5.42404e-11 Query: 297 TCTHMVVEVGMSTCMV 344 HSP 21 Score: 25.3524 bits (49), Expect = 5.42404e-11 Query: 321 CTRMXXXXXXXXXVGTCTHMVVE 389 HSP 22 Score: 51.0121 bits (105), Expect = 6.83451e-11 Query: 154 LLQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 23 Score: 30.3778 bits (60), Expect = 6.83451e-11 Query: 2 TNKTIQVLIPTST 40 | ||||
RO454_contig15020_v2 | 4.03403e-22 | 88.00% | ||
RO454_contig15020_v2 | ||||
HSP 1 Score: 55.5941 bits (115), Expect = 4.03403e-22 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 2 Score: 43.6807 bits (89), Expect = 4.03403e-22 Query: 291 GTCTHMVVEVGMSTCMVQL 347 HSP 3 Score: 40.9315 bits (83), Expect = 4.03403e-22 Query: 3 WRWG*VLVWFCW 38 HSP 4 Score: 58.3434 bits (121), Expect = 4.07706e-20 Query: 159 TCTHMVVEVGMSTCMVLLVVVGIC 230 HSP 5 Score: 44.5971 bits (91), Expect = 4.07706e-20 Query: 291 GTCTHMVVEVGMSTCMVQL 347 HSP 6 Score: 30.3927 bits (60), Expect = 4.07706e-20 Query: 3 WRWG*VLVWFCW 38 HSP 7 Score: 52.3867 bits (108), Expect = 1.72553e-17 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 8 Score: 43.6807 bits (89), Expect = 1.72553e-17 Query: 291 TCTHMVVEVGMSTCMVQL 344 HSP 9 Score: 24.8942 bits (48), Expect = 1.72553e-17 Query: 324 VVTCTRMXXXXXXXXXVGTCTHMVV 398 HSP 10 Score: 52.8449 bits (109), Expect = 2.24169e-13 Query: 151 ILLQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 11 Score: 29.0096 bits (57), Expect = 2.24169e-13 Query: 2 TNKTIQVLIPTST 40 HSP 12 Score: 24.8942 bits (48), Expect = 2.24169e-13 Query: 310 LIPTSTTI*VQVP 348 HSP 13 Score: 51.9285 bits (107), Expect = 1.39205e-11 Query: 168 GTCTHMVVEVGMSTCMVLLVVV 233 HSP 14 Score: 34.0583 bits (68), Expect = 1.39205e-11 Query: 3 WRWG*VLVWFCW 38 | ||||
RO454_contig26951_v2 | 3.60916e-14 | 92.00% | ||
RO454_contig26951_v2 | ||||
HSP 1 Score: 57.427 bits (119), Expect = 3.60916e-14 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 2 Score: 28.5598 bits (56), Expect = 3.60916e-14 Query: 297 TCTHMVVEVGMSTCMV 344 HSP 3 Score: 23.5196 bits (45), Expect = 3.60916e-14 Query: 3 WRWG*VLVWFCW 38 | ||||
RO454_contig8095_v2 | 8.235e-14 | 92.00% | ||
RO454_contig8095_v2 | ||||
HSP 1 Score: 57.8852 bits (120), Expect = 8.235e-14 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 2 Score: 29.0181 bits (57), Expect = 8.235e-14 Query: 297 VVTCTRMXXXXXXXXXVGTCTHMVVEVGMSTCMV 398 HSP 3 Score: 22.1449 bits (42), Expect = 8.235e-14 Query: 9 WRWG*VLVWF 38 HSP 4 Score: 58.8016 bits (122), Expect = 3.88248e-11 Query: 151 ILLQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 5 Score: 24.436 bits (47), Expect = 3.88248e-11 Query: 313 IPTSTTI*VQVPXXXXXXXXXXIRVQVTT 399 | ||||
RO454_contig181_v2 | 2.72215e-13 | 92.00% | ||
RO454_contig181_v2 | ||||
HSP 1 Score: 58.8016 bits (122), Expect = 2.72215e-13 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 2 Score: 29.9345 bits (59), Expect = 2.72215e-13 Query: 321 VTCTRMXXXXXXXXXVGTCTHMVVE 395 | ||||
RO454_contig15019_v2 | 4.20821e-11 | 92.00% | ||
RO454_contig15019_v2 | ||||
HSP 1 Score: 58.8016 bits (122), Expect = 4.20821e-11 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 2 Score: 22.6031 bits (43), Expect = 4.20821e-11 Query: 321 GTCTHMVVE 347 | ||||
Loading...

Blast Hits to Contigs V2 WO454
Analysis Date: 11-03-2009 (Blast: AC454_contigs_v2_vs_WO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Best 10 Hits Shown
Note: Click a description for more details.
| Match Name | E value | Identity | ||
|---|---|---|---|---|
WO454_contig3958_v2 | 6.79276e-24 | 66.67% | ||
WO454_contig3958_v2 | ||||
HSP 1 Score: 53.7613 bits (111), Expect = 6.79276e-24 Query: 291 VVTCTRMXXXXXXXXXVGTCTHMVVEVGMSTCMVQL 398 HSP 2 Score: 51.4703 bits (106), Expect = 6.79276e-24 Query: 165 GTCTHMVVEVGMSTCMVLLVVVG 233 HSP 3 Score: 37.2658 bits (75), Expect = 6.79276e-24 Query: 2 GGGGDEYLYGFVG 40 HSP 4 Score: 52.3867 bits (108), Expect = 4.32237e-23 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 5 Score: 50.0956 bits (103), Expect = 4.32237e-23 Query: 291 CTRMXXXXXXXXXVGTCTHMVVEVGMSTCMVQL 389 HSP 6 Score: 37.2658 bits (75), Expect = 4.32237e-23 Query: 3 WRWG*VLVWFCW 38 HSP 7 Score: 61.0927 bits (127), Expect = 9.59372e-20 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 8 Score: 44.5971 bits (91), Expect = 9.59372e-20 Query: 291 VVTCTRMXXXXXXXXXVGTCTHMVVEVGMSTCMVQL 398 HSP 9 Score: 27.1852 bits (53), Expect = 9.59372e-20 Query: 3 WRWG*VLVWFCW 38 HSP 10 Score: 60.6344 bits (126), Expect = 5.16997e-18 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 11 Score: 40.9315 bits (83), Expect = 5.16997e-18 Query: 3 WRWG*VLVWFCW 38 HSP 12 Score: 25.3524 bits (49), Expect = 5.16997e-18 Query: 321 VTCTRMXXXXXXXXXVGTCTHMVVE 395 HSP 13 Score: 51.0121 bits (105), Expect = 6.05925e-15 Query: 154 LLQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 14 Score: 34.9748 bits (70), Expect = 6.05925e-15 Query: 310 LIPTSTTI*VQVPXXXXXXXXXXIRVQVTT 399 HSP 15 Score: 30.3778 bits (60), Expect = 6.05925e-15 Query: 2 TNKTIQVLIPTST 40 HSP 16 Score: 62.0091 bits (129), Expect = 5.0766e-14 Query: 97 TTIRXXXXXXXXXXXXXXILLQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 17 Score: 29.0096 bits (57), Expect = 5.0766e-14 Query: 2 TNKTIQVLIPTST 40 HSP 18 Score: 22.1449 bits (42), Expect = 5.0766e-14 Query: 319 TSTTI*VQVPXXXXXXXXXXIRVQVTT 399 HSP 19 Score: 54.6777 bits (113), Expect = 1.36257e-12 Query: 97 TTIRXXXXXXXXXXXXXXILLQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 20 Score: 34.9748 bits (70), Expect = 1.36257e-12 Query: 316 PTSTTI*VQVPXXXXXXXXXXIRVQVTT 399 | ||||
WO454_contig19466_v2 | 1.73889e-23 | 96.00% | ||
WO454_contig19466_v2 | ||||
HSP 1 Score: 61.0927 bits (127), Expect = 1.73889e-23 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 2 Score: 46.43 bits (95), Expect = 1.73889e-23 Query: 291 GTCTHMVVEVGMSTCMVQL 347 HSP 3 Score: 37.2658 bits (75), Expect = 1.73889e-23 Query: 2 GGGGDEYLYGFVG 40 HSP 4 Score: 57.8852 bits (120), Expect = 5.19199e-18 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 5 Score: 46.43 bits (95), Expect = 5.19199e-18 Query: 291 GTCTHMVVEVGMSTCMVQL 347 HSP 6 Score: 21.6867 bits (41), Expect = 5.19199e-18 Query: 9 WRWG*VLVWF 38 HSP 7 Score: 57.427 bits (119), Expect = 2.70084e-15 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 8 Score: 40.9315 bits (83), Expect = 2.70084e-15 Query: 3 WRWG*VLVWFCW 38 HSP 9 Score: 57.427 bits (119), Expect = 3.31374e-15 Query: 157 LQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 10 Score: 30.3778 bits (60), Expect = 3.31374e-15 Query: 2 TNKTIQVLIPTST 40 HSP 11 Score: 28.5598 bits (56), Expect = 3.31374e-15 Query: 310 LIPTSTTI*VQVP 348 HSP 12 Score: 57.427 bits (119), Expect = 1.38843e-12 Query: 151 ILLQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 13 Score: 31.7459 bits (63), Expect = 1.38843e-12 Query: 2 TNKTIQVLIPTST 40 HSP 14 Score: 56.0524 bits (116), Expect = 2.30376e-12 Query: 157 LQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 15 Score: 29.9345 bits (59), Expect = 2.30376e-12 Query: 310 LIPTSTTI*VQVP 348 | ||||
WO454_contig11562_v2 | 3.9473e-19 | 88.00% | ||
WO454_contig11562_v2 | ||||
HSP 1 Score: 55.1359 bits (114), Expect = 3.9473e-19 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 2 Score: 46.43 bits (95), Expect = 3.9473e-19 Query: 291 GTCTHMVVEVGMSTCMVQL 347 HSP 3 Score: 28.1016 bits (55), Expect = 3.9473e-19 Query: 11 GGWGTLGTPIVVGGGGDEYLYG 76 HSP 4 Score: 61.0927 bits (127), Expect = 5.22742e-16 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 5 Score: 37.2658 bits (75), Expect = 5.22742e-16 Query: 3 WRWG*VLVWFCW 38 HSP 6 Score: 57.427 bits (119), Expect = 2.00164e-11 Query: 157 LQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 7 Score: 25.3613 bits (49), Expect = 2.00164e-11 Query: 2 TNKTIQVLIPTST 40 HSP 8 Score: 52.3867 bits (108), Expect = 2.74346e-11 Query: 154 LLQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 9 Score: 29.9345 bits (59), Expect = 2.74346e-11 Query: 310 LIPTSTTI*VQVP 348 | ||||
WO454_contig15356_v2 | 3.59459e-18 | 88.00% | ||
WO454_contig15356_v2 | ||||
HSP 1 Score: 55.5941 bits (115), Expect = 3.59459e-18 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 2 Score: 50.0956 bits (103), Expect = 3.59459e-18 Query: 291 VVTCTRMXXXXXXXXXVGTCTHMVVEVGMSTCMVQL 398 HSP 3 Score: 55.5941 bits (115), Expect = 1.27968e-15 Query: 159 TCTHMVVEVGMSTCMVLLVVVGIC 230 HSP 4 Score: 32.6837 bits (65), Expect = 1.27968e-15 Query: 3 WRWG*VLVWFCW 38 HSP 5 Score: 25.8106 bits (50), Expect = 1.27968e-15 Query: 294 VVTCTRMXXXXXXXXXVGTCTHMVVEVGMSTCMVQ 398 | ||||
WO454_contig21891_v2 | 3.53651e-17 | 95.45% | ||
WO454_contig21891_v2 | ||||
HSP 1 Score: 51.4703 bits (106), Expect = 3.53651e-17 Query: 168 GTCTHMVVEVGMSTCMVLLVVV 233 HSP 2 Score: 50.0956 bits (103), Expect = 3.53651e-17 Query: 291 VVTCTRMXXXXXXXXXVGTCTHMVVEVGMSTCMVQL 398 HSP 3 Score: 61.0927 bits (127), Expect = 3.12807e-16 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 4 Score: 37.2658 bits (75), Expect = 3.12807e-16 Query: 2 GGGGDEYLYGFVG 40 HSP 5 Score: 57.427 bits (119), Expect = 4.09973e-13 Query: 157 LQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 6 Score: 30.3778 bits (60), Expect = 4.09973e-13 Query: 2 TNKTIQVLIPTST 40 HSP 7 Score: 48.721 bits (100), Expect = 4.2282e-11 Query: 169 TTTNKTIQVLIPTSTTI*VQVP 234 HSP 8 Score: 32.2255 bits (64), Expect = 4.2282e-11 Query: 310 LIPTSTTI*VQVPXXXXXXXXXXIRVQVTT 399 | ||||
WO454_contig7556_v2 | 1.53263e-16 | 88.00% | ||
WO454_contig7556_v2 | ||||
HSP 1 Score: 55.5941 bits (115), Expect = 1.53263e-16 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 2 Score: 44.5971 bits (91), Expect = 1.53263e-16 Query: 291 VVTCTRMXXXXXXXXXVGTCTHMVVEVGMSTCMVQL 398 HSP 3 Score: 53.3031 bits (110), Expect = 6.05528e-15 Query: 162 GTCTHMVVEVGMSTCMVLLVVVGI 233 HSP 4 Score: 35.8912 bits (72), Expect = 6.05528e-15 Query: 3 WRWG*VLVWFCW 38 HSP 5 Score: 22.6031 bits (43), Expect = 6.05528e-15 Query: 321 CTRMXXXXXXXXXVGTCTHMVVE 389 HSP 6 Score: 57.427 bits (119), Expect = 3.79315e-11 Query: 97 TTIRXXXXXXXXXXXXXXILLQIPTTTNKTIQVLIPTSTTI*VQVP 234 HSP 7 Score: 24.4493 bits (47), Expect = 3.79315e-11 Query: 2 TNKTIQVLIPTST 40 | ||||
WO454_contig15358_v2 | 7.60446e-15 | 89.47% | ||
WO454_contig15358_v2 | ||||
HSP 1 Score: 44.1389 bits (90), Expect = 7.60446e-15 Query: 291 GTCTHMVVEVGMSTCMVQL 347 HSP 2 Score: 42.3061 bits (86), Expect = 7.60446e-15 Query: 183 GTCTHMVVEVGMSTCMV 233 HSP 3 Score: 23.0613 bits (44), Expect = 7.60446e-15 Query: 9 WRWG*VLVWF 38 HSP 4 Score: 56.0524 bits (116), Expect = 1.27909e-12 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 5 Score: 29.9345 bits (59), Expect = 1.27909e-12 Query: 11 GGGGDEYLYG 40 | ||||
WO454_contig4845_v2 | 2.28269e-13 | 92.00% | ||
WO454_contig4845_v2 | ||||
HSP 1 Score: 57.8852 bits (120), Expect = 2.28269e-13 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 2 Score: 26.2688 bits (51), Expect = 2.28269e-13 Query: 321 VVTCTRMXXXXXXXXXVGTCTHMVVE 398 HSP 3 Score: 22.1449 bits (42), Expect = 2.28269e-13 Query: 9 WRWG*VLVWF 38 | ||||
WO454_contig15357_v2 | 5.1585e-13 | 95.65% | ||
WO454_contig15357_v2 | ||||
HSP 1 Score: 53.3031 bits (110), Expect = 5.1585e-13 Query: 162 TCTHMVVEVGMSTCMVLLVVVGI 230 HSP 2 Score: 31.3091 bits (62), Expect = 5.1585e-13 Query: 297 GTCTHMVVEVGMSTCMV 347 HSP 3 Score: 21.6867 bits (41), Expect = 5.1585e-13 Query: 9 WRWG*VLVWF 38 HSP 4 Score: 60.6344 bits (126), Expect = 6.73926e-13 Query: 159 GTCTHMVVEVGMSTCMVLLVVVGIC 233 HSP 5 Score: 27.1852 bits (53), Expect = 6.73926e-13 Query: 3 WRWG*VLVWFCW 38 HSP 6 Score: 49.6374 bits (102), Expect = 7.01078e-11 Query: 291 GTCTHMVVEVGMSTCMVQL 347 HSP 7 Score: 31.3091 bits (62), Expect = 7.01078e-11 Query: 192 GTCTHMVVEVGMST 233 | ||||
WO454_contig10662_v2 | 9.50992e-12 | 61.11% | ||
WO454_contig10662_v2 | ||||
HSP 1 Score: 47.8046 bits (98), Expect = 9.50992e-12 Query: 291 VVTCTRMXXXXXXXXXVGTCTHMVVEVGMSTCMVQL 398 HSP 2 Score: 23.9778 bits (46), Expect = 9.50992e-12 Query: 207 GTCTHMVVE 233 HSP 3 Score: 23.9778 bits (46), Expect = 9.50992e-12 Query: 11 GGGGDEYLYG 40 HSP 4 Score: 21.6867 bits (41), Expect = 9.50992e-12 Query: 162 VGMSTCMVLLVVVGI 206 | ||||
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