Fagaceae Genomics Web

AB454_contig6053_v2

Name	AB454_contig6053_v2
Accession	ID1838403
Sequence	CGAAACGCTGCGTATAAGCGCGAATCTCGCTTCTTCAAATTCAAACGCAA CGGAATCACCACCGCTCTCTTTAGCTGATTCGGTGGAgARTCAGAGTCGG AATCGGAGGAgGGCTAGGGCTGGTAGAGGAAGAGTACGTGAATTCAAGCT TGAGGCTGATTTGCTGCGAGGAAATCGACGGTCGTAGATGGAACTACGTG GCAGAAAAAGCTCCCTCTCTGGAACCTTCAGGAAGGGCTCCATTCGCGCC CTCACTATGCACACTCCTCCAGCTCCCGTTGAGGATCTAATGTCATTCGT AAGATCGTATGTGGTTCCAGAAGGTTT
Length	327
Type	contig
Organism	American Beech

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References

Dababase	Accession
GFF_source	SeqManPro

Alignment Viewer

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ESTs in this contig

Type	Feature	Position
EST	ABWP1_018068_0542_2657	0-254
EST	ABWP1_013431_0579_2277	83-327

InterProScan Analysis

Analysis Date: 11-02-2009 (Interpro: AB454_contigs_v2)

SEQUENCE: AB454_contig6053_v2_2_ORF1 CRC64: 2A44214ADD333D99 LENGTH: 61 aa

noIPR
unintegrated

unintegrated
seg		seg

SEQUENCE: AB454_contig6053_v2_3_ORF2 CRC64: EFE084FFD8186906 LENGTH: 71 aa

noIPR
unintegrated

unintegrated
seg		seg

SEQUENCE: AB454_contig6053_v2_4_ORF1 CRC64: 2A3411214D572C83 LENGTH: 78 aa

noIPR
unintegrated

unintegrated
seg		seg

SEQUENCE: AB454_contig6053_v2_2_ORF1 CRC64: 2A44214ADD333D99 LENGTH: 61 aa

noIPR
unintegrated

unintegrated

SEG

seg

seg

NA [6-16]?

NA [33-46]?

Parent

no parent

Children

no children

Found in

no entries

Contains

no entries

GO terms

none

SEQUENCE: AB454_contig6053_v2_3_ORF2 CRC64: EFE084FFD8186906 LENGTH: 71 aa

noIPR
unintegrated

unintegrated

SEG

seg

seg

NA [1-20]?

Parent

no parent

Children

no children

Found in

no entries

Contains

no entries

GO terms

none

SEQUENCE: AB454_contig6053_v2_4_ORF1 CRC64: 2A3411214D572C83 LENGTH: 78 aa

noIPR
unintegrated

unintegrated

SEG

seg

seg

NA [66-78]?

Parent

no parent

Children

no children

Found in

no entries

Contains

no entries

GO terms

none

Blast Hits to Uniprot

Analysis Date: 11-02-2009 (Blast: AB454_v2_uniprot)
Best 10 Hits Shown
Note: Click a description for more details.

Match Name	E value	Identity
B9SIQ0_RICCO	7.43709e-16	85.19%
Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0825020 PE=4 SV=1
HSP 1 Score: 54.6842 bits (130), Expect = 7.43709e-16 Identity = 23/27 (85.19%), Postives = 26/27 (96.30%), Query Frame = 3 Query: 126 EEEYVNSSLRLICCEEIDGRRWNYVAE 206 EEE+V+SSLRLICCEEIDGR+W YVAE Sbjct: 74 EEEFVDSSLRLICCEEIDGRKWKYVAE 100 HSP 2 Score: 52.373 bits (124), Expect = 7.43709e-16 Identity = 22/35 (62.86%), Postives = 29/35 (82.86%), Query Frame = 2 Query: 221 GTFRKGSIRALTMHTPPAPVEDLMSFVRSYVVPEG 325 G F+K S R++++ P APVE+LMSF+RSYVVPEG Sbjct: 105 GRFKKNSFRSVSLQNPQAPVEELMSFIRSYVVPEG 139
A7QCD7_VITVI	2.92306e-14	63.89%
Chromosome undetermined scaffold_77, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035355001 PE=4 SV=1
HSP 1 Score: 51.6026 bits (122), Expect = 2.92306e-14 Identity = 23/36 (63.89%), Postives = 29/36 (80.56%), Query Frame = 2 Query: 218 SGTFRKGSIRALTMHTPPAPVEDLMSFVRSYVVPEG 325 +G R GS+RA+ TP APV++LMSF+RSYVVPEG Sbjct: 88 NGQGRNGSLRAVCSQTPQAPVDELMSFIRSYVVPEG 123 HSP 2 Score: 50.0618 bits (118), Expect = 2.92306e-14 Identity = 19/27 (70.37%), Postives = 26/27 (96.30%), Query Frame = 3 Query: 126 EEEYVNSSLRLICCEEIDGRRWNYVAE 206 +E++V++SLRLICCEEI+GRRWNYV + Sbjct: 57 DEQFVDASLRLICCEEINGRRWNYVVD 83
A5AUK4_VITVI	2.92685e-14	63.89%
Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003254 PE=4 SV=1
HSP 1 Score: 51.6026 bits (122), Expect = 2.92685e-14 Identity = 23/36 (63.89%), Postives = 29/36 (80.56%), Query Frame = 2 Query: 218 SGTFRKGSIRALTMHTPPAPVEDLMSFVRSYVVPEG 325 +G R GS+RA+ TP APV++LMSF+RSYVVPEG Sbjct: 88 NGQGRNGSLRAVCSQTPQAPVDELMSFIRSYVVPEG 123 HSP 2 Score: 50.0618 bits (118), Expect = 2.92685e-14 Identity = 19/27 (70.37%), Postives = 26/27 (96.30%), Query Frame = 3 Query: 126 EEEYVNSSLRLICCEEIDGRRWNYVAE 206 +E++V++SLRLICCEEI+GRRWNYV + Sbjct: 57 DEQFVDASLRLICCEEINGRRWNYVVD 83
Q93YU2_ARATH	9.25723e-12	50.00%
Putative uncharacterized protein At5g49820 OS=Arabidopsis thaliana GN=At5g49820 PE=2 SV=1
HSP 1 Score: 47.7506 bits (112), Expect = 9.25723e-12 Identity = 20/40 (50.00%), Postives = 31/40 (77.50%), Query Frame = 2 Query: 206 KSSLSGTFRKGSIRALTMHTPPAPVEDLMSFVRSYVVPEG 325 +S SG F+K S+RA+++ +P P +++ SF+RSYVVPEG Sbjct: 77 ESDGSGRFKKNSVRAISLESPQTPFDEVGSFLRSYVVPEG 116 HSP 2 Score: 45.4394 bits (106), Expect = 9.25723e-12 Identity = 18/27 (66.67%), Postives = 25/27 (92.59%), Query Frame = 3 Query: 126 EEEYVNSSLRLICCEEIDGRRWNYVAE 206 + ++++S+LRLICCEEIDGRR+ YVAE Sbjct: 51 DSQFLHSTLRLICCEEIDGRRFKYVAE 77

Blast Hits to Contigs V2 ABall

Analysis Date: 11-02-2009 (Blast: AB454_contigs_v2_vs_ABall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.

Match Name	E value	Identity
ABall_contig6146_v2	1.71891e-56	88.89%
ABall_contig6146_v2
HSP 1 Score: 211.843 bits (456), Expect = 1.71891e-56 Identity = 96/108 (88.89%), Postives = 96/108 (88.89%), Query Frame = -3 Query: 2 TFWNHIRSYEHILNGSWRSVHSEGANGALPEGSREGAFSATFHLRPSISSQQISLKLEFTYXXXXXXXXXXXXTLXLHRISRERWFRCVIRSEIRAYTQRF 325 TFWNHIRSYEHILNGSWRSVHSEGANGALPEGSREGAFSATFHLRPSISSQQISLKLEFTY TLXLHRISRERWFRCVIRSEIRAYTQRF Sbjct: 2 TFWNHIRSYEHILNGSWRSVHSEGANGALPEGSREGAFSATFHLRPSISSQQISLKLEFTYSSSTSPSPPPIPTLXLHRISRERWFRCVIRSEIRAYTQRF 325 HSP 2* Score: 164.648 bits (353), Expect = 3.66027e-56 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = -2 Query: 120 NLLEPHTILRMTLDPQRELEECA*GREWSPSRFQRGSFFCHVVPSTTVDFLAANQPQAIHVLFLYQ 326 NLLEPHTILRMTLDPQRELEECAGREWSPSRFQRGSFFCHVVPSTTVDFLAANQPQAIHVLFLYQ Sbjct: 120 NLLEPHTILRMTLDPQRELEECAGREWSPSRFQRGSFFCHVVPSTTVDFLAANQPQAIHVLFLYQ 326 HSP 3* Score: 65.0265 bits (137), Expect = 3.66027e-56 Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = -1 Query: 1 STESAKESGGDSVAFEFEEARFALIRSVS 87 STESAKESGGDSVAFEFEEARFALIRSVS Sbjct: 1 STESAKESGGDSVAFEFEEARFALIRSVS 87 HSP 4 Score: 166.022 bits (356), Expect = 4.98746e-54 Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 3 Query: 126 EEEYVNSSLRLICCEEIDGRRWNYVAEKAPSLEPSGRAPFAPSLCTLLQLPLRICHSDRMWFQKV 326 EEEYVNSSLRLICCEEIDGRRWNYVAEKAPSLEPSGRAPFAPSLCTLLQLPLRICHSDRMWFQKV Sbjct: 126 EEEYVNSSLRLICCEEIDGRRWNYVAEKAPSLEPSGRAPFAPSLCTLLQLPLRICHSDRMWFQKV 326 HSP 5 Score: 56.5106 bits (117), Expect = 4.98746e-54 Identity = 23/23 (100.00%), Postives = 23/23 (100.00%), Query Frame = 1 Query: 1 RNAAYKRESRFFKFKRNGITTAL 69 RNAAYKRESRFFKFKRNGITTAL Sbjct: 1 RNAAYKRESRFFKFKRNGITTAL 69 HSP 6 Score: 162.357 bits (348), Expect = 7.73473e-52 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1 Query: 121 WRKSTIQAGFAARKSTVVDGTTWQKKLPLWNLQEGLHSRPHYAHSSSSRGSNVIRKIVCGSRRF 327 WRKSTIQAGFAARKSTVVDGTTWQKKLPLWNLQEGLHSRPHYAHSSSSRGSNVIRKIVCGSRRF Sbjct: 121 WRKSTIQAGFAARKSTVVDGTTWQKKLPLWNLQEGLHSRPHYAHSSSSRGSNVIRKIVCGSRRF 327 HSP 7* Score: 52.8449 bits (109), Expect = 7.73473e-52 Identity = 22/22 (100.00%), Postives = 22/22 (100.00%), Query Frame = 3 Query: 3 KRCVARISLLQIQTQRNHHRS 68 KRCVARISLLQIQTQRNHHRS Sbjct: 3 KRCVARISLLQIQTQRNHHRS 68 HSP 8* Score: 152.92 bits (331), Expect = 2.40158e-51 Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = -1 Query: 133 KPSGTTYDLTNDIRSSTGAGGVCIVRARMEPFLKVPERELFLPRSSIYDRRFPRSKSASSLNSRT 327 KPSGTTYDLTNDIRSSTGAGGVCIVRARMEPFLKVPERELFLPRSSIYDRRFPRSKSASSLNSRT Sbjct: 133 KPSGTTYDLTNDIRSSTGAGGVCIVRARMEPFLKVPERELFLPRSSIYDRRFPRSKSASSLNSRT 327 HSP 9 Score: 60.6344 bits (126), Expect = 2.40158e-51 Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = -2 Query: 3 NQLKRAVVIPLRLNLKKRDSRLYAAF 80 NQLKRAVVIPLRLNLKKRDSRLYAAF Sbjct: 3 NQLKRAVVIPLRLNLKKRDSRLYAAF 80 HSP 10 Score: 175.645 bits (377), Expect = 1.35544e-45 Identity = 83/108 (76.85%), Postives = 83/108 (76.85%), Query Frame = 2 Query: 2 ETLRIXXXXXXXXXXXTESPPLSLADSVEXQSXXXXXXXXXXXXXXEFKLEADLLRGNRRSMELRGRKSSLSGTFRKGSIRALTMHTPPAPVEDLMSFVRSYVVPEG 325 ETLRI TESPPLSLADSVEXQS EFKLEADLLRGNRRSMELRGRKSSLSGTFRKGSIRALTMHTPPAPVEDLMSFVRSYVVPEG Sbjct: 2 ETLRISANLASSNSNATESPPLSLADSVEXQSRNRRRARAGRGRVREFKLEADLLRGNRRS*MELRGRKSSLSGTFRKGSIRALTMHTPPAPVEDLMSFVRSYVVPEG 325

Match Name

E value

Identity

ABall_contig6146_v2

1.71891e-56

88.89%

ABall_contig6146_v2

HSP 1

Score: 211.843 bits (456), Expect = 1.71891e-56
Identity = 96/108 (88.89%), Postives = 96/108 (88.89%), Query Frame = -3

Query:    2 TFWNHIRSYE*H*ILNGSWRSVHSEGANGALPEGSREGAFSAT*FHLRPSISSQQISLKLEFTYXXXXXXXXXXXXTLXLHRIS*RERW*FRCV*I*RSEIRAYTQRF 325
            TFWNHIRSYE*H*ILNGSWRSVHSEGANGALPEGSREGAFSAT*FHLRPSISSQQISLKLEFTY            TLXLHRIS*RERW*FRCV*I*RSEIRAYTQRF
Sbjct:    2 TFWNHIRSYE*H*ILNGSWRSVHSEGANGALPEGSREGAFSAT*FHLRPSISSQQISLKLEFTYSSSTSPSPPPIPTLXLHRIS*RERW*FRCV*I*RSEIRAYTQRF 325

HSP 2

Score: 164.648 bits (353), Expect = 3.66027e-56
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = -2

Query:  120 NLLEPHTILRMTLDPQRELEECA**GREWSPS*RFQRGSFFCHVVPSTTVDFLAANQPQA*IHVLFLYQ 326
            NLLEPHTILRMTLDPQRELEECA**GREWSPS*RFQRGSFFCHVVPSTTVDFLAANQPQA*IHVLFLYQ
Sbjct:  120 NLLEPHTILRMTLDPQRELEECA**GREWSPS*RFQRGSFFCHVVPSTTVDFLAANQPQA*IHVLFLYQ 326

HSP 3

Score: 65.0265 bits (137), Expect = 3.66027e-56
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = -1

Query:    1 STESAKESGGDSVAFEFEEARFALIRSVS 87
            STESAKESGGDSVAFEFEEARFALIRSVS
Sbjct:    1 STESAKESGGDSVAFEFEEARFALIRSVS 87

HSP 4

Score: 166.022 bits (356), Expect = 4.98746e-54
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 3

Query:  126 EEEYVNSSLRLICCEEIDGRRWNYVAEKAPSLEPSGRAPFAPSLCTLLQLPLRI*CHS*DRMWFQKV 326
            EEEYVNSSLRLICCEEIDGRRWNYVAEKAPSLEPSGRAPFAPSLCTLLQLPLRI*CHS*DRMWFQKV
Sbjct:  126 EEEYVNSSLRLICCEEIDGRRWNYVAEKAPSLEPSGRAPFAPSLCTLLQLPLRI*CHS*DRMWFQKV 326

HSP 5

Score: 56.5106 bits (117), Expect = 4.98746e-54
Identity = 23/23 (100.00%), Postives = 23/23 (100.00%), Query Frame = 1

Query:    1 RNAAYKRESRFFKFKRNGITTAL 69
            RNAAYKRESRFFKFKRNGITTAL
Sbjct:    1 RNAAYKRESRFFKFKRNGITTAL 69

HSP 6

Score: 162.357 bits (348), Expect = 7.73473e-52
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1

Query:  121 W*RKST*IQA*G*FAARKSTVVDGTTWQKKLPLWNLQEGLHSRPHYAHSSSSR*GSNVIRKIVCGSRRF 327
            W*RKST*IQA*G*FAARKSTVVDGTTWQKKLPLWNLQEGLHSRPHYAHSSSSR*GSNVIRKIVCGSRRF
Sbjct:  121 W*RKST*IQA*G*FAARKSTVVDGTTWQKKLPLWNLQEGLHSRPHYAHSSSSR*GSNVIRKIVCGSRRF 327

HSP 7

Score: 52.8449 bits (109), Expect = 7.73473e-52
Identity = 22/22 (100.00%), Postives = 22/22 (100.00%), Query Frame = 3

Query:    3 KRCV*ARISLLQIQTQRNHHRS 68
            KRCV*ARISLLQIQTQRNHHRS
Sbjct:    3 KRCV*ARISLLQIQTQRNHHRS 68

HSP 8

Score: 152.92 bits (331), Expect = 2.40158e-51
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = -1

Query:  133 KPSGTTYDLTNDIRSSTGAGGVCIVRARMEPFLKVPERELFLPRSSIYDRRFPRSKSASSLNSRT 327
            KPSGTTYDLTNDIRSSTGAGGVCIVRARMEPFLKVPERELFLPRSSIYDRRFPRSKSASSLNSRT
Sbjct:  133 KPSGTTYDLTNDIRSSTGAGGVCIVRARMEPFLKVPERELFLPRSSIYDRRFPRSKSASSLNSRT 327

HSP 9

Score: 60.6344 bits (126), Expect = 2.40158e-51
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = -2

Query:    3 NQLKRAVVIPLRLNLKKRDSRLYAAF 80
            NQLKRAVVIPLRLNLKKRDSRLYAAF
Sbjct:    3 NQLKRAVVIPLRLNLKKRDSRLYAAF 80

HSP 10

Score: 175.645 bits (377), Expect = 1.35544e-45
Identity = 83/108 (76.85%), Postives = 83/108 (76.85%), Query Frame = 2

Query:    2 ETLRIXXXXXXXXXXXTESPPLSLADSVEXQSXXXXXXXXXXXXXXEFKLEADLLRGNRRS*MELRGRKSSLSGTFRKGSIRALTMHTPPAPVEDLMSFVRSYVVPEG 325
            ETLRI           TESPPLSLADSVEXQS              EFKLEADLLRGNRRS*MELRGRKSSLSGTFRKGSIRALTMHTPPAPVEDLMSFVRSYVVPEG
Sbjct:    2 ETLRISANLASSNSNATESPPLSLADSVEXQSRNRRRARAGRGRVREFKLEADLLRGNRRS*MELRGRKSSLSGTFRKGSIRALTMHTPPAPVEDLMSFVRSYVVPEG 325

Blast Hits to MedicagoProt

Analysis Date: 11-02-2009 (Blast: AB454_contigs_v2_vs_MedicagoProt_20080227)
Best 10 Hits Shown
Note: Click a description for more details.

Match Name	E value	Identity
IMGA\|AC144806_8.4 Protein of unknown function DUF647 chr04_p	8.32811e-15	47.50%
eudomolecule_IMGAG_V2 20685580-20692547 E EGN_Mt071002 20080227
HSP 1 Score: 48.521 bits (114), Expect = 8.32811e-15 Identity = 19/40 (47.50%), Postives = 31/40 (77.50%), Query Frame = 2 Query: 206 KSSLSGTFRKGSIRALTMHTPPAPVEDLMSFVRSYVVPEG 325 +++ SG F+ S R+L++ TP P++++MSF+ SYVVPEG Sbjct: 70 ETNASGQFKNNSFRSLSLQTPKPPLDEMMSFITSYVVPEG 109 HSP 2 Score: 46.595 bits (109), Expect = 8.32811e-15 Identity = 19/21 (90.48%), Postives = 20/21 (95.24%), Query Frame = 3 Query: 144 SSLRLICCEEIDGRRWNYVAE 206 S+LR ICCEEIDGRRWNYVAE Sbjct: 50 STLRFICCEEIDGRRWNYVAE 70

Match Name

E value

Identity

IMGA|AC144806_8.4 Protein of unknown function DUF647 chr04_p

8.32811e-15

47.50%

eudomolecule_IMGAG_V2 20685580-20692547 E EGN_Mt071002 20080227

HSP 1

Score: 48.521 bits (114), Expect = 8.32811e-15
Identity = 19/40 (47.50%), Postives = 31/40 (77.50%), Query Frame = 2

Query:  206 KSSLSGTFRKGSIRALTMHTPPAPVEDLMSFVRSYVVPEG 325
            +++ SG F+  S R+L++ TP  P++++MSF+ SYVVPEG
Sbjct:   70 ETNASGQFKNNSFRSLSLQTPKPPLDEMMSFITSYVVPEG 109

HSP 2

Score: 46.595 bits (109), Expect = 8.32811e-15
Identity = 19/21 (90.48%), Postives = 20/21 (95.24%), Query Frame = 3

Query:  144 SSLRLICCEEIDGRRWNYVAE 206
            S+LR ICCEEIDGRRWNYVAE
Sbjct:   50 STLRFICCEEIDGRRWNYVAE 70

Blast Hits to Contig V2 Oall

Analysis Date: 11-02-2009 (Blast: AB454_contigs_v2_vs_Oall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.

Match Name	E value	Identity
Oall_contig9807_v2	3.63506e-29	96.43%
Oall_contig9807_v2
HSP 1 Score: 68.424 bits (143), Expect = 3.63506e-29 Identity = 27/28 (96.43%), Postives = 27/28 (96.43%), Query Frame = 3 Query: 126 EEEYVNSSLRLICCEEIDGRRWNYVAEK 209 EEEYVNSSLRLIC EEIDGRRWNYVAEK Sbjct: 116 EEEYVNSSLRLICSEEIDGRRWNYVAEK 199 HSP 2 Score: 67.5076 bits (141), Expect = 3.63506e-29 Identity = 28/39 (71.79%), Postives = 32/39 (82.05%), Query Frame = 2 Query: 206 KSSLSGTFRKGSIRALTMHTPPAPVEDLMSFVRSYVVPE 322 K +LSGTF K SIR LT++TP P EDLMSF+RSYVVPE Sbjct: 2 KDALSGTFNKASIRXLTLNTPQPPREDLMSFLRSYVVPE 118 HSP 3 Score: 21.6867 bits (41), Expect = 3.63506e-29 Identity = 7/12 (58.33%), Postives = 9/12 (75.00%), Query Frame = 3 Query: 30 LLQIQTQRNHHR 65 L+QIQ + HHR Sbjct: 252 LIQIQQSQRHHR 287 HSP 4 Score: 65.2165 bits (136), Expect = 1.56136e-22 Identity = 25/30 (83.33%), Postives = 27/30 (90.00%), Query Frame = -2 Query: 120 FFCHVVPSTTVDFLAANQPQAIHVLFLYQ 209 FFCHVVPS TVDFL ANQPQA IH+LFL+Q Sbjct: 116 FFCHVVPSATVDFLGANQPQARIHILFLHQ 205 HSP 5* Score: 54.2195 bits (112), Expect = 1.56136e-22 Identity = 24/40 (60.00%), Postives = 28/40 (70.00%), Query Frame = -2 Query: 204 LLEPHTILRMTLDPQRELEECA*GREWSPSRFQRGSFF 323 LLE H IL+MT +P E+EEC+ GREW RFQR F Sbjct: 1 LLELHRILKMTSNPHEEVEECSEGREWRLCRFQRVRLF 120 HSP 6 Score: 62.0091 bits (129), Expect = 2.13474e-22 Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 1 Query: 202 QKKLPLWNLQEGLHSRPHYAHSSSSRGSNVIRKIVCGSR 321 +K+ LWNLQ+ LHSRPH HSS+S G +VI KI+C SR Sbjct: 3 RKRRTLWNLQQSLHSRPHSEHSSTSSGFDVIFKILCSSR 122 HSP 7* Score: 56.9688 bits (118), Expect = 2.13474e-22 Identity = 25/30 (83.33%), Postives = 26/30 (86.67%), Query Frame = 1 Query: 121 WRKSTIQAGFAARKSTVVDGTTWQKK 210 W RKS I+AGFA RKSTV DGTTWQKK Sbjct: 115 WWRKSMIRAGFAPRKSTVADGTTWQKK 204 HSP 8 Score: 50.9817 bits (106), Expect = 4.29614e-17 Identity = 25/39 (64.10%), Postives = 26/39 (66.67%), Query Frame = -1 Query: 205 SGTTYDLTNDIRSSTGAGGVCIVRARMEPFLKVPERELF 321 SGTT DL NDI+SS G GV VR RME LKVPE F Sbjct: 3 SGTTDLKNDIKSSRGGGVFRVRXRMEALLKVPESASF 119 HSP 9 Score: 50.0756 bits (104), Expect = 4.29614e-17 Identity = 22/26 (84.62%), Postives = 22/26 (84.62%), Query Frame = -1 Query: 133 LFLPRSSIYDRRFPRSKSASSLNSRT 210 LFLPRSSI DRRFPRSKS SS NS T Sbjct: 115 LFLPRSSICDRRFPRSKSTSSSNSHT 192 HSP 10 Score: 52.8449 bits (109), Expect = 7.7417e-17 Identity = 26/40 (65.00%), Postives = 29/40 (72.50%), Query Frame = 3 Query: 204 EKAPSLEPSGRAPFAPSLCTLLQLPLRICHSDRMWFQK 323 +K SLEPS + PFA SL TLL L +RICH D M FQK Sbjct: 1 KKTHSLEPSTKPPFAXSLTLLNLLVRICHFDPMFQK 120 HSP 11 Score: 47.3464 bits (97), Expect = 7.7417e-17 Identity = 20/23 (86.96%), Postives = 21/23 (91.30%), Query Frame = 2 Query: 140 EFKLEADLLRGNRRS*MELRGRK 208 EF+LE DLLRGNRRS MELRGRK Sbjct: 117 EFELEVDLLRGNRRSQMELRGRK 185
Oall_contig13459_v2	8.69035e-23	82.50%
Oall_contig13459_v2
HSP 1 Score: 81.712 bits (172), Expect = 8.69035e-23 Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = 2 Query: 206 KSSLSGTFRKGSIRALTMHTPPAPVEDLMSFVRSYVVPEG 325 K +LSGTF+K SIRALT+H+P APVEDLMSFVRSYVVPEG Sbjct: 150 KDALSGTFKKNSIRALTLHSPQAPVEDLMSFVRSYVVPEG 269 HSP 2 Score: 38.6404 bits (78), Expect = 8.69035e-23 Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = 3 Query: 168 EEIDGRRWNYVAEK 209 EEIDGRRWNYVAEK Sbjct: 267 EEIDGRRWNYVAEK 308 HSP 3 Score: 71.3694 bits (151), Expect = 1.05539e-17 Identity = 33/41 (80.49%), Postives = 33/41 (80.49%), Query Frame = -1 Query: 205 KPSGTTYDLTNDIRSSTGAGGVCIVRARMEPFLKVPERELF 327 KPSGTT DLTNDIRSSTGA G C VRARME FLKVPE F Sbjct: 148 KPSGTTDLTNDIRSSTGACGECKVRARMEFFLKVPESASF 270 HSP 4* Score: 31.7673 bits (63), Expect = 1.05539e-17 Identity = 13/14 (92.86%), Postives = 14/14 (100.00%), Query Frame = -3 Query: 170 AFSATFHLRPSIS 211 +FSATFHLRPSIS Sbjct: 265 SFSATFHLRPSIS 306 HSP 5* Score: 70.2568 bits (147), Expect = 1.69519e-17 Identity = 30/41 (73.17%), Postives = 32/41 (78.05%), Query Frame = 3 Query: 204 EKAPSLEPSGRAPFAPSLCTLLQLPLRICHSDRMWFQKV 326 +K LEPS R PFAPSLCTL +L LRICH D MWFQKV Sbjct: 149 KKTRFLEPSRRTPFAPSLCTLRKLQLRICHLDLMWFQKV 271 HSP 6 Score: 32.2255 bits (64), Expect = 1.69519e-17 Identity = 12/14 (85.71%), Postives = 12/14 (85.71%), Query Frame = 1 Query: 169 RKSTVVDGTTWQKK 210 RKSTV DGTTW KK Sbjct: 266 RKSTVADGTTWLKK 307 HSP 7 Score: 67.5076 bits (141), Expect = 1.45936e-16 Identity = 29/40 (72.50%), Postives = 31/40 (77.50%), Query Frame = -3 Query: 206 TFWNHIRSYEHILNGSWRSVHSEGANGALPEGSREGAF 325 TFWNHIRSY+H ILN S R V SEGANG L EGSR+ F Sbjct: 150 TFWNHIRSYKHQILNWSLRRVQSEGANGVLLEGSRKRVF 269 HSP 8 Score: 31.7673 bits (63), Expect = 1.45936e-16 Identity = 12/14 (85.71%), Postives = 12/14 (85.71%), Query Frame = -2 Query: 168 FFCHVVPSTTVDFL 209 FF HVVPS TVDFL Sbjct: 267 FFSHVVPSATVDFL 308 HSP 9 Score: 65.6747 bits (137), Expect = 2.08284e-15 Identity = 29/41 (70.73%), Postives = 31/41 (75.61%), Query Frame = -2 Query: 204 NLLEPHTILRMTLDPQRELEECA*GREWSPSRFQRGSFF 326 NLLEPH IL+MT DPQ EL E A GREWS SRFQ+ F Sbjct: 149 NLLEPHKILQMTSDPQLELAESAKGREWSSSRFQKARLF 271 HSP 10 Score: 29.6879 bits (59), Expect = 2.08284e-15 Identity = 12/14 (85.71%), Postives = 12/14 (85.71%), Query Frame = -1 Query: 169 LFLPRSSIYDRRFP 210 LF PRSSI DRRFP Sbjct: 266 LFQPRSSICDRRFP 307 HSP 11 Score: 70.2568 bits (147), Expect = 2.47448e-15 Identity = 29/41 (70.73%), Postives = 34/41 (82.93%), Query Frame = 1 Query: 205 KKLPLWNLQEGLHSRPHYAHSSSSRGSNVIRKIVCGSRRF 327 K+ WNLQE LHSRPH+A S+SS GS+VI KI+CGSRRF Sbjct: 148 KRRAFWNLQEELHSRPHFALSASSSGSDVICKILCGSRRF 270 HSP 12* Score: 24.8942 bits (48), Expect = 2.47448e-15 Identity = 11/13 (84.62%), Postives = 11/13 (84.62%), Query Frame = 2 Query: 170 GNRRSMELRGRK 208 GNRRS MELRG K Sbjct: 268 GNRRSQMELRGK 306

Blast Hits to Contig V2 RO454

Analysis Date: 11-02-2009 (Blast: AB454_contigs_v2_vs_RO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.

Match Name	E value	Identity
RO454_contig6459_v2	2.27595e-29	96.43%
RO454_contig6459_v2
HSP 1 Score: 68.424 bits (143), Expect = 2.27595e-29 Identity = 27/28 (96.43%), Postives = 27/28 (96.43%), Query Frame = 3 Query: 126 EEEYVNSSLRLICCEEIDGRRWNYVAEK 209 EEEYVNSSLRLIC EEIDGRRWNYVAEK Sbjct: 116 EEEYVNSSLRLICSEEIDGRRWNYVAEK 199 HSP 2 Score: 67.5076 bits (141), Expect = 2.27595e-29 Identity = 28/39 (71.79%), Postives = 32/39 (82.05%), Query Frame = 2 Query: 206 KSSLSGTFRKGSIRALTMHTPPAPVEDLMSFVRSYVVPE 322 K +LSGTF K SIR LT++TP P EDLMSF+RSYVVPE Sbjct: 2 KDALSGTFNKASIRXLTLNTPQPPREDLMSFLRSYVVPE 118 HSP 3 Score: 21.6867 bits (41), Expect = 2.27595e-29 Identity = 7/12 (58.33%), Postives = 9/12 (75.00%), Query Frame = 3 Query: 30 LLQIQTQRNHHR 65 L+QIQ + HHR Sbjct: 252 LIQIQQSQRHHR 287 HSP 4 Score: 65.2165 bits (136), Expect = 9.63981e-23 Identity = 25/30 (83.33%), Postives = 27/30 (90.00%), Query Frame = -2 Query: 120 FFCHVVPSTTVDFLAANQPQAIHVLFLYQ 209 FFCHVVPS TVDFL ANQPQA IH+LFL+Q Sbjct: 116 FFCHVVPSATVDFLGANQPQARIHILFLHQ 205 HSP 5* Score: 54.2195 bits (112), Expect = 9.63981e-23 Identity = 24/40 (60.00%), Postives = 28/40 (70.00%), Query Frame = -2 Query: 204 LLEPHTILRMTLDPQRELEECA*GREWSPSRFQRGSFF 323 LLE H IL+MT +P E+EEC+ GREW RFQR F Sbjct: 1 LLELHRILKMTSNPHEEVEECSEGREWRLCRFQRVRLF 120 HSP 6 Score: 62.0091 bits (129), Expect = 1.31798e-22 Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 1 Query: 202 QKKLPLWNLQEGLHSRPHYAHSSSSRGSNVIRKIVCGSR 321 +K+ LWNLQ+ LHSRPH HSS+S G +VI KI+C SR Sbjct: 3 RKRRTLWNLQQSLHSRPHSEHSSTSSGFDVIFKILCSSR 122 HSP 7* Score: 56.9688 bits (118), Expect = 1.31798e-22 Identity = 25/30 (83.33%), Postives = 26/30 (86.67%), Query Frame = 1 Query: 121 WRKSTIQAGFAARKSTVVDGTTWQKK 210 W RKS I+AGFA RKSTV DGTTWQKK Sbjct: 115 WWRKSMIRAGFAPRKSTVADGTTWQKK 204 HSP 8 Score: 50.9817 bits (106), Expect = 2.65216e-17 Identity = 25/39 (64.10%), Postives = 26/39 (66.67%), Query Frame = -1 Query: 205 SGTTYDLTNDIRSSTGAGGVCIVRARMEPFLKVPERELF 321 SGTT DL NDI+SS G GV VR RME LKVPE F Sbjct: 3 SGTTDLKNDIKSSRGGGVFRVRXRMEALLKVPESASF 119 HSP 9 Score: 50.0756 bits (104), Expect = 2.65216e-17 Identity = 22/26 (84.62%), Postives = 22/26 (84.62%), Query Frame = -1 Query: 133 LFLPRSSIYDRRFPRSKSASSLNSRT 210 LFLPRSSI DRRFPRSKS SS NS T Sbjct: 115 LFLPRSSICDRRFPRSKSTSSSNSHT 192 HSP 10 Score: 52.8449 bits (109), Expect = 4.77919e-17 Identity = 26/40 (65.00%), Postives = 29/40 (72.50%), Query Frame = 3 Query: 204 EKAPSLEPSGRAPFAPSLCTLLQLPLRICHSDRMWFQK 323 +K SLEPS + PFA SL TLL L +RICH D M FQK Sbjct: 1 KKTHSLEPSTKPPFAXSLTLLNLLVRICHFDPMFQK 120 HSP 11 Score: 47.3464 bits (97), Expect = 4.77919e-17 Identity = 20/23 (86.96%), Postives = 21/23 (91.30%), Query Frame = 2 Query: 140 EFKLEADLLRGNRRS*MELRGRK 208 EF+LE DLLRGNRRS MELRGRK Sbjct: 117 EFELEVDLLRGNRRSQMELRGRK 185

Match Name

E value

Identity

RO454_contig6459_v2

2.27595e-29

96.43%

RO454_contig6459_v2

HSP 1

Score: 68.424 bits (143), Expect = 2.27595e-29
Identity = 27/28 (96.43%), Postives = 27/28 (96.43%), Query Frame = 3

Query:  126 EEEYVNSSLRLICCEEIDGRRWNYVAEK 209
            EEEYVNSSLRLIC EEIDGRRWNYVAEK
Sbjct:  116 EEEYVNSSLRLICSEEIDGRRWNYVAEK 199

HSP 2

Score: 67.5076 bits (141), Expect = 2.27595e-29
Identity = 28/39 (71.79%), Postives = 32/39 (82.05%), Query Frame = 2

Query:  206 KSSLSGTFRKGSIRALTMHTPPAPVEDLMSFVRSYVVPE 322
            K +LSGTF K SIR LT++TP  P EDLMSF+RSYVVPE
Sbjct:    2 KDALSGTFNKASIRXLTLNTPQPPREDLMSFLRSYVVPE 118

HSP 3

Score: 21.6867 bits (41), Expect = 2.27595e-29
Identity = 7/12 (58.33%), Postives = 9/12 (75.00%), Query Frame = 3

Query:   30 LLQIQTQRNHHR 65
            L+QIQ  + HHR
Sbjct:  252 LIQIQQSQRHHR 287

HSP 4

Score: 65.2165 bits (136), Expect = 9.63981e-23
Identity = 25/30 (83.33%), Postives = 27/30 (90.00%), Query Frame = -2

Query:  120 FFCHVVPSTTVDFLAANQPQA*IHVLFLYQ 209
            FFCHVVPS TVDFL ANQPQA IH+LFL+Q
Sbjct:  116 FFCHVVPSATVDFLGANQPQARIHILFLHQ 205

HSP 5

Score: 54.2195 bits (112), Expect = 9.63981e-23
Identity = 24/40 (60.00%), Postives = 28/40 (70.00%), Query Frame = -2

Query:  204 LLEPHTILRMTLDPQRELEECA**GREWSPS*RFQRGSFF 323
            LLE H IL+MT +P  E+EEC+ *GREW   *RFQR   F
Sbjct:    1 LLELHRILKMTSNPHEEVEECSE*GREWRLC*RFQRVRLF 120

HSP 6

Score: 62.0091 bits (129), Expect = 1.31798e-22
Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 1

Query:  202 QKKLPLWNLQEGLHSRPHYAHSSSSR*GSNVIRKIVCGSR 321
            +K+  LWNLQ+ LHSRPH  HSS+S *G +VI KI+C SR
Sbjct:    3 RKRRTLWNLQQSLHSRPHSEHSSTSS*GFDVIFKILCSSR 122

HSP 7

Score: 56.9688 bits (118), Expect = 1.31798e-22
Identity = 25/30 (83.33%), Postives = 26/30 (86.67%), Query Frame = 1

Query:  121 W*RKST*IQA*G*FAARKSTVVDGTTWQKK 210
            W RKS *I+A*G*FA RKSTV DGTTWQKK
Sbjct:  115 WWRKSM*IRA*G*FAPRKSTVADGTTWQKK 204

HSP 8

Score: 50.9817 bits (106), Expect = 2.65216e-17
Identity = 25/39 (64.10%), Postives = 26/39 (66.67%), Query Frame = -1

Query:  205 SGTTYDLTNDIRSSTGAGGVCIVRARMEPFLKVPERELF 321
            SGTT DL NDI+SS G  GV  VR RME  LKVPE   F
Sbjct:    3 SGTT*DLKNDIKSSRGG*GVFRVRXRMEALLKVPESASF 119

HSP 9

Score: 50.0756 bits (104), Expect = 2.65216e-17
Identity = 22/26 (84.62%), Postives = 22/26 (84.62%), Query Frame = -1

Query:  133 LFLPRSSIYDRRFPRSKSASSLNSRT 210
            LFLPRSSI DRRFPRSKS SS NS T
Sbjct:  115 LFLPRSSICDRRFPRSKSTSSSNSHT 192

HSP 10

Score: 52.8449 bits (109), Expect = 4.77919e-17
Identity = 26/40 (65.00%), Postives = 29/40 (72.50%), Query Frame = 3

Query:  204 EKAPSLEPSGRAPFAPSLCTLLQLPLRI*CHS*DRMWFQK 323
            +K  SLEPS + PFA SL TLL L +RI*CH *D M FQK
Sbjct:    1 KKTHSLEPSTKPPFAXSL*TLLNLLVRI*CHF*DPM*FQK 120

HSP 11

Score: 47.3464 bits (97), Expect = 4.77919e-17
Identity = 20/23 (86.96%), Postives = 21/23 (91.30%), Query Frame = 2

Query:  140 EFKLEADLLRGNRRS*MELRGRK 208
            EF+LE DLLRGNRRS MELRGRK
Sbjct:  117 EFELEVDLLRGNRRSQMELRGRK 185

Blast Hits to TAIR7 Peptides

Analysis Date: 11-02-2009 (Blast: AB454_contigs_v2_vs_TAIR7_pep_20070425)
Best 10 Hits Shown
Note: Click a description for more details.

Match Name	E value	Identity
AT5G49820.1	4.32221e-14	50.00%
EMB1879 (EMBRYO DEFECTIVE 1879) \| chr5:20263979-20266658 REVERSE
HSP 1 Score: 47.7506 bits (112), Expect = 4.32221e-14 Identity = 20/40 (50.00%), Postives = 31/40 (77.50%), Query Frame = 2 Query: 206 KSSLSGTFRKGSIRALTMHTPPAPVEDLMSFVRSYVVPEG 325 +S SG F+K S+RA+++ +P P +++ SF+RSYVVPEG Sbjct: 77 ESDGSGRFKKNSVRAISLESPQTPFDEVGSFLRSYVVPEG 116 HSP 2 Score: 45.4394 bits (106), Expect = 4.32221e-14 Identity = 18/27 (66.67%), Postives = 25/27 (92.59%), Query Frame = 3 Query: 126 EEEYVNSSLRLICCEEIDGRRWNYVAE 206 + ++++S+LRLICCEEIDGRR+ YVAE Sbjct: 51 DSQFLHSTLRLICCEEIDGRRFKYVAE 77

Match Name

E value

Identity

AT5G49820.1

4.32221e-14

50.00%

EMB1879 (EMBRYO DEFECTIVE 1879) | chr5:20263979-20266658 REVERSE

HSP 1

Score: 47.7506 bits (112), Expect = 4.32221e-14
Identity = 20/40 (50.00%), Postives = 31/40 (77.50%), Query Frame = 2

Query:  206 KSSLSGTFRKGSIRALTMHTPPAPVEDLMSFVRSYVVPEG 325
            +S  SG F+K S+RA+++ +P  P +++ SF+RSYVVPEG
Sbjct:   77 ESDGSGRFKKNSVRAISLESPQTPFDEVGSFLRSYVVPEG 116

HSP 2

Score: 45.4394 bits (106), Expect = 4.32221e-14
Identity = 18/27 (66.67%), Postives = 25/27 (92.59%), Query Frame = 3

Query:  126 EEEYVNSSLRLICCEEIDGRRWNYVAE 206
            + ++++S+LRLICCEEIDGRR+ YVAE
Sbjct:   51 DSQFLHSTLRLICCEEIDGRRFKYVAE 77

Blast Hits to Contigs V2 WO454

Analysis Date: 11-02-2009 (Blast: AB454_contigs_v2_vs_WO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.

Match Name	E value	Identity
WO454_contig6803_v2	4.15749e-23	82.50%
WO454_contig6803_v2
HSP 1 Score: 81.712 bits (172), Expect = 4.15749e-23 Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = 2 Query: 206 KSSLSGTFRKGSIRALTMHTPPAPVEDLMSFVRSYVVPEG 325 K +LSGTF+K SIRALT+H+P APVEDLMSFVRSYVVPEG Sbjct: 150 KDALSGTFKKNSIRALTLHSPQAPVEDLMSFVRSYVVPEG 269 HSP 2 Score: 38.6404 bits (78), Expect = 4.15749e-23 Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = 3 Query: 168 EEIDGRRWNYVAEK 209 EEIDGRRWNYVAEK Sbjct: 267 EEIDGRRWNYVAEK 308 HSP 3 Score: 71.3694 bits (151), Expect = 5.05179e-18 Identity = 33/41 (80.49%), Postives = 33/41 (80.49%), Query Frame = -1 Query: 205 KPSGTTYDLTNDIRSSTGAGGVCIVRARMEPFLKVPERELF 327 KPSGTT DLTNDIRSSTGA G C VRARME FLKVPE F Sbjct: 148 KPSGTTDLTNDIRSSTGACGECKVRARMEFFLKVPESASF 270 HSP 4* Score: 31.7673 bits (63), Expect = 5.05179e-18 Identity = 13/14 (92.86%), Postives = 14/14 (100.00%), Query Frame = -3 Query: 170 AFSATFHLRPSIS 211 +FSATFHLRPSIS Sbjct: 265 SFSATFHLRPSIS 306 HSP 5* Score: 70.2568 bits (147), Expect = 8.10765e-18 Identity = 30/41 (73.17%), Postives = 32/41 (78.05%), Query Frame = 3 Query: 204 EKAPSLEPSGRAPFAPSLCTLLQLPLRICHSDRMWFQKV 326 +K LEPS R PFAPSLCTL +L LRICH D MWFQKV Sbjct: 149 KKTRFLEPSRRTPFAPSLCTLRKLQLRICHLDLMWFQKV 271 HSP 6 Score: 32.2255 bits (64), Expect = 8.10765e-18 Identity = 12/14 (85.71%), Postives = 12/14 (85.71%), Query Frame = 1 Query: 169 RKSTVVDGTTWQKK 210 RKSTV DGTTW KK Sbjct: 266 RKSTVADGTTWLKK 307 HSP 7 Score: 67.5076 bits (141), Expect = 6.98496e-17 Identity = 29/40 (72.50%), Postives = 31/40 (77.50%), Query Frame = -3 Query: 206 TFWNHIRSYEHILNGSWRSVHSEGANGALPEGSREGAF 325 TFWNHIRSY+H ILN S R V SEGANG L EGSR+ F Sbjct: 150 TFWNHIRSYKHQILNWSLRRVQSEGANGVLLEGSRKRVF 269 HSP 8 Score: 31.7673 bits (63), Expect = 6.98496e-17 Identity = 12/14 (85.71%), Postives = 12/14 (85.71%), Query Frame = -2 Query: 168 FFCHVVPSTTVDFL 209 FF HVVPS TVDFL Sbjct: 267 FFSHVVPSATVDFL 308 HSP 9 Score: 65.6747 bits (137), Expect = 9.96827e-16 Identity = 29/41 (70.73%), Postives = 31/41 (75.61%), Query Frame = -2 Query: 204 NLLEPHTILRMTLDPQRELEECA*GREWSPSRFQRGSFF 326 NLLEPH IL+MT DPQ EL E A GREWS SRFQ+ F Sbjct: 149 NLLEPHKILQMTSDPQLELAESAKGREWSSSRFQKARLF 271 HSP 10 Score: 29.6879 bits (59), Expect = 9.96827e-16 Identity = 12/14 (85.71%), Postives = 12/14 (85.71%), Query Frame = -1 Query: 169 LFLPRSSIYDRRFP 210 LF PRSSI DRRFP Sbjct: 266 LFQPRSSICDRRFP 307 HSP 11 Score: 70.2568 bits (147), Expect = 1.1833e-15 Identity = 29/41 (70.73%), Postives = 34/41 (82.93%), Query Frame = 1 Query: 205 KKLPLWNLQEGLHSRPHYAHSSSSRGSNVIRKIVCGSRRF 327 K+ WNLQE LHSRPH+A S+SS GS+VI KI+CGSRRF Sbjct: 148 KRRAFWNLQEELHSRPHFALSASSSGSDVICKILCGSRRF 270 HSP 12* Score: 24.8942 bits (48), Expect = 1.1833e-15 Identity = 11/13 (84.62%), Postives = 11/13 (84.62%), Query Frame = 2 Query: 170 GNRRSMELRGRK 208 GNRRS MELRG K Sbjct: 268 GNRRSQMELRGK 306

Match Name

E value

Identity

WO454_contig6803_v2

4.15749e-23

82.50%

WO454_contig6803_v2

HSP 1

Score: 81.712 bits (172), Expect = 4.15749e-23
Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = 2

Query:  206 KSSLSGTFRKGSIRALTMHTPPAPVEDLMSFVRSYVVPEG 325
            K +LSGTF+K SIRALT+H+P APVEDLMSFVRSYVVPEG
Sbjct:  150 KDALSGTFKKNSIRALTLHSPQAPVEDLMSFVRSYVVPEG 269

HSP 2

Score: 38.6404 bits (78), Expect = 4.15749e-23
Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = 3

Query:  168 EEIDGRRWNYVAEK 209
            EEIDGRRWNYVAEK
Sbjct:  267 EEIDGRRWNYVAEK 308

HSP 3

Score: 71.3694 bits (151), Expect = 5.05179e-18
Identity = 33/41 (80.49%), Postives = 33/41 (80.49%), Query Frame = -1

Query:  205 KPSGTTYDLTNDIRSSTGAGGVCIVRARMEPFLKVPERELF 327
            KPSGTT DLTNDIRSSTGA G C VRARME FLKVPE   F
Sbjct:  148 KPSGTT*DLTNDIRSSTGACGECKVRARMEFFLKVPESASF 270

HSP 4

Score: 31.7673 bits (63), Expect = 5.05179e-18
Identity = 13/14 (92.86%), Postives = 14/14 (100.00%), Query Frame = -3

Query:  170 AFSAT*FHLRPSIS 211
            +FSAT*FHLRPSIS
Sbjct:  265 SFSAT*FHLRPSIS 306

HSP 5

Score: 70.2568 bits (147), Expect = 8.10765e-18
Identity = 30/41 (73.17%), Postives = 32/41 (78.05%), Query Frame = 3

Query:  204 EKAPSLEPSGRAPFAPSLCTLLQLPLRI*CHS*DRMWFQKV 326
            +K   LEPS R PFAPSLCTL +L LRI*CH *D MWFQKV
Sbjct:  149 KKTRFLEPSRRTPFAPSLCTLRKLQLRI*CHL*DLMWFQKV 271

HSP 6

Score: 32.2255 bits (64), Expect = 8.10765e-18
Identity = 12/14 (85.71%), Postives = 12/14 (85.71%), Query Frame = 1

Query:  169 RKSTVVDGTTWQKK 210
            RKSTV DGTTW KK
Sbjct:  266 RKSTVADGTTWLKK 307

HSP 7

Score: 67.5076 bits (141), Expect = 6.98496e-17
Identity = 29/40 (72.50%), Postives = 31/40 (77.50%), Query Frame = -3

Query:  206 TFWNHIRSYE*H*ILNGSWRSVHSEGANGALPEGSREGAF 325
            TFWNHIRSY+*H ILN S R V SEGANG L EGSR+  F
Sbjct:  150 TFWNHIRSYK*HQILNWSLRRVQSEGANGVLLEGSRKRVF 269

HSP 8

Score: 31.7673 bits (63), Expect = 6.98496e-17
Identity = 12/14 (85.71%), Postives = 12/14 (85.71%), Query Frame = -2

Query:  168 FFCHVVPSTTVDFL 209
            FF HVVPS TVDFL
Sbjct:  267 FFSHVVPSATVDFL 308

HSP 9

Score: 65.6747 bits (137), Expect = 9.96827e-16
Identity = 29/41 (70.73%), Postives = 31/41 (75.61%), Query Frame = -2

Query:  204 NLLEPHTILRMTLDPQRELEECA**GREWSPS*RFQRGSFF 326
            NLLEPH IL+MT DPQ EL E A *GREWS S*RFQ+   F
Sbjct:  149 NLLEPHKILQMTSDPQLELAESAK*GREWSSS*RFQKARLF 271

HSP 10

Score: 29.6879 bits (59), Expect = 9.96827e-16
Identity = 12/14 (85.71%), Postives = 12/14 (85.71%), Query Frame = -1

Query:  169 LFLPRSSIYDRRFP 210
            LF PRSSI DRRFP
Sbjct:  266 LFQPRSSICDRRFP 307

HSP 11

Score: 70.2568 bits (147), Expect = 1.1833e-15
Identity = 29/41 (70.73%), Postives = 34/41 (82.93%), Query Frame = 1

Query:  205 KKLPLWNLQEGLHSRPHYAHSSSSR*GSNVIRKIVCGSRRF 327
            K+   WNLQE LHSRPH+A S+SS *GS+VI KI+CGSRRF
Sbjct:  148 KRRAFWNLQEELHSRPHFALSASSS*GSDVICKILCGSRRF 270

HSP 12

Score: 24.8942 bits (48), Expect = 1.1833e-15
Identity = 11/13 (84.62%), Postives = 11/13 (84.62%), Query Frame = 2

Query:  170 GNRRS*MELRGRK 208
            GNRRS MELRG K
Sbjct:  268 GNRRSQMELRG*K 306

Fagaceae Genomics Web

AB454_contig6053_v2

References

ESTs in this contig

InterProScan Analysis

Blast Hits to Uniprot

Blast Hits to Contigs V2 ABall

Blast Hits to MedicagoProt

Blast Hits to Contig V2 Oall

Blast Hits to Contig V2 RO454

Blast Hits to TAIR7 Peptides

Blast Hits to Contigs V2 WO454

Organisms

Project Information

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