Fagaceae Genomics Web

AB454_contig6024_v2

Name	AB454_contig6024_v2
Accession	ID1838310
Sequence	AGTAGGAGGCACTGATAACACAGCCTCTACGTTCCCTCGAGCTCACTGGG TTGGGGTCAAGTTTTGTCAATCGGATTCACTTAGTCCTGGGAAGTCTGTG GAGGTGTCACAGCCCATAAAGAAGAGCCGAAGAGGACCCAGGTCTAGGAG CTCACAGTATCGTGGTGTAACGTTTTACCGGAGAACTGGTCGCTGGGAGT CTCACATATGGGATTGTGGAAAGCAAGTTTATCTGGGTGGATTTGACACT GCACATGCA
Length	259
Type	contig
Organism	American Beech

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References

Dababase	Accession
GFF_source	SeqManPro

Alignment Viewer

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ESTs in this contig

Type	Feature	Position
EST	ABWP2_018634_1817_1438	0-148
EST	ABWP1_067263_0828_2840	7-259

GO terms assigned to this feature

Accession	Category	Term
GO:0003677	molecular_function	DNA binding
GO:0003700	molecular_function	transcription factor activity

KEGG Analysis

Analysis Date: 11-25-2009 (KEGG: AB454_v2) K09284 AP2; AP2-like factor, euAP2 lineage

Analysis Date: 11-25-2009 (KEGG: AB454_v2)
K09284 AP2; AP2-like factor, euAP2 lineage

InterProScan Analysis

Analysis Date: 11-02-2009 (Interpro: AB454_contigs_v2)

SEQUENCE: AB454_contig6024_v2_2_ORF1 CRC64: 36DE8D6226AD1769 LENGTH: 86 aa

InterPro
IPR001471
Domain

Pathogenesis-related transcriptional factor/ERF, DNA-binding
PF00847		AP2
SM00380		no description

InterPro
IPR016177
Domain

DNA-binding, integrase-type
SSF54171		DNA-binding domain

noIPR
unintegrated

unintegrated
seg		seg

SEQUENCE: AB454_contig6024_v2_2_ORF1 CRC64: 36DE8D6226AD1769 LENGTH: 86 aa

InterPro
IPR001471
Domain

Pathogenesis-related transcriptional factor/ERF, DNA-binding

PFAM

PF00847

AP2

3.5e-08 [51-84]T

SMART

SM00380

no description

0.0015 [52-86]T

Parent

IPR016177

Children

no children

Found in

IPR017392

Contains

no entries

GO terms

Molecular Function: transcription factor activity (GO:0003700)

InterPro
IPR016177
Domain

DNA-binding, integrase-type

SUPERFAMILY

SSF54171

DNA-binding domain

7.3e-07 [51-86]T

Parent

no parent

Children

IPR001471 IPR001739 IPR004191 IPR015094

Found in

no entries

Contains

no entries

GO terms

Molecular Function: DNA binding (GO:0003677)

noIPR
unintegrated

unintegrated

SEG

seg

seg

NA [42-51]?

Parent

no parent

Children

no children

Found in

no entries

Contains

no entries

GO terms

none

Blast Hits to Uniprot

Analysis Date: 11-02-2009 (Blast: AB454_v2_uniprot)
Best 10 Hits Shown | Show Best 25 Hits | Show All Hits
Note: Click a description for more details.

Match Name	E value	Identity
Q9AXI4_PEA	4.576e-31	73.56%
APETAL2-like protein OS=Pisum sativum PE=2 SV=1
HSP 1 Score: 137.117 bits (344), Expect = 4.576e-31 Identity = 64/87 (73.56%), Postives = 70/87 (80.46%), Query Frame = 2 Query: 8 GTDNTASTFPRAHWVGVKFCQSDSLSPGKSVEVS---QPIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259 GT + +STFPRAHWVGVKFCQS++L GKS+EVS QP+KK QYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA Sbjct: 125 GTSSCSSTFPRAHWVGVKFCQSETLGSGKSMEVSSSSQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 211
B9H6I6_POPTR	1.73888e-30	74.71%
AP2 domain-containing transcription factor OS=Populus trichocarpa GN=RAP1 PE=4 SV=1
HSP 1 Score: 135.191 bits (339), Expect = 1.73888e-30 Identity = 65/87 (74.71%), Postives = 67/87 (77.01%), Query Frame = 2 Query: 2 VGGTDNTASTFPRAHWVGVKFCQSDS-LSPGKSVEVSQPIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259 VGG D FPRAHWVGVKFCQSDS L KS+EVSQP+KK QYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA Sbjct: 119 VGGGDGGGGGFPRAHWVGVKFCQSDSSLVSQKSMEVSQPLKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 205
B9HH99_POPTR	3.87382e-30	73.26%
AP2 domain-containing transcription factor OS=Populus trichocarpa GN=RAP2 PE=4 SV=1
HSP 1 Score: 134.035 bits (336), Expect = 3.87382e-30 Identity = 63/86 (73.26%), Postives = 67/86 (77.91%), Query Frame = 2 Query: 5 GGTDNTASTFPRAHWVGVKFCQSDS-LSPGKSVEVSQPIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259 GG D FPRAHWVGVKFCQS+S L+ KS+EVSQP+KK QYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA Sbjct: 124 GGGDGVGGGFPRAHWVGVKFCQSESSLASQKSMEVSQPLKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 209
A7PLE5_VITVI	8.0774e-28	70.24%
Transcription factor APETALA2 OS=Vitis vinifera GN=AP2 PE=2 SV=1
HSP 1 Score: 126.331 bits (316), Expect = 8.0774e-28 Identity = 59/84 (70.24%), Postives = 64/84 (76.19%), Query Frame = 2 Query: 23 ASTFPRAHWVGVKFCQSDSLSPG-----KSVEVSQPIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259 A+ FPRAHWVGVKFCQS+ L+ KS+E SQP+KK QYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA Sbjct: 106 AAAFPRAHWVGVKFCQSEPLNTAGVATAKSLEASQPLKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 189
A6XA55_MALDO	6.83793e-27	71.76%
AP2-like protein (Fragment) OS=Malus domestica PE=2 SV=1
HSP 1 Score: 123.25 bits (308), Expect = 6.83793e-27 Identity = 61/85 (71.76%), Postives = 65/85 (76.47%), Query Frame = 2 Query: 17 NTASTFPRAHWVGVKFCQSDSLSPGK---SVEVS-QPIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259 +T S+FPRAHWVGV F QSDS SPGK + E S QP+KK QYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA Sbjct: 34 STTSSFPRAHWVGVNFGQSDSGSPGKPPPTAEASHQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 118
Q8VWW8_MALDO	4.43222e-26	68.24%
Transcription factor AHAP2 OS=Malus domestica GN=AHAP2 PE=2 SV=2
HSP 1 Score: 120.553 bits (301), Expect = 4.43222e-26 Identity = 58/85 (68.24%), Postives = 62/85 (72.94%), Query Frame = 2 Query: 17 NTASTFPRAHWVGVKFCQSDSLSPGKSVEVS----QPIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259 +T+S+FPRAHWVGV F QSDS SPG QP+KK QYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA Sbjct: 132 STSSSFPRAHWVGVNFGQSDSGSPGNPPPAGEASHQPMKKSRRGPRSRNSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 216
AP2_ARATH	7.56021e-26	67.42%
Floral homeotic protein APETALA 2 OS=Arabidopsis thaliana GN=AP2 PE=1 SV=1
HSP 1 Score: 119.783 bits (299), Expect = 7.56021e-26 Identity = 60/89 (67.42%), Postives = 63/89 (70.79%), Query Frame = 2 Query: 23 ASTFPRAHWVGVKFCQSD---SLSPGKS-------VEVSQPIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259 AS FPRAHW GVKFCQSD S GK+ VE +QP+KK QYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA Sbjct: 77 ASGFPRAHWFGVKFCQSDLATGSSAGKATNVAAAVVEPAQPLKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 165
Q58KH6_BRACM	6.40011e-25	61.70%
AP2-like transcriptional factor OS=Brassica campestris GN=BAP2 PE=4 SV=1
HSP 1 Score: 116.701 bits (291), Expect = 6.40011e-25 Identity = 58/94 (61.70%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 8 GTDNTASTFPRAHWVGVKFCQSDSLSPGKS----------VEVSQPIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259 G S FPR+HW GVKFCQSD L+ G S VE +QP+KK QYRGVTFYRRTGRWESH+WDCGKQVYLGGFDTAHA Sbjct: 77 GGGGPGSGFPRSHWFGVKFCQSD-LATGSSAGKPATVAAVVEPAQPLKKSRRGPRSRSSQYRGVTFYRRTGRWESHMWDCGKQVYLGGFDTAHA 169
B5B0E0_PONTR	1.86215e-24	71.79%
Transcription factor APETALA2 OS=Poncirus trifoliata GN=AP2 PE=2 SV=1
HSP 1 Score: 115.161 bits (287), Expect = 1.86215e-24 Identity = 56/78 (71.79%), Postives = 60/78 (76.92%), Query Frame = 2 Query: 32 FPRAHWVGVKFCQSDSL-SPGKSV-EVSQPIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259 FPRA+WVGVKFCQS+ + GKSV E QP+KK QYRGVTFYRRTGRWESHIWD GKQVYLGGFDTAHA Sbjct: 116 FPRANWVGVKFCQSEPIVEAGKSVIEAPQPLKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDSGKQVYLGGFDTAHA 193
Q84U24_ANTMA	3.17634e-24	71.43%
LIPLESS1 OS=Antirrhinum majus GN=lip1 PE=2 SV=1
HSP 1 Score: 114.39 bits (285), Expect = 3.17634e-24 Identity = 55/77 (71.43%), Postives = 58/77 (75.32%), Query Frame = 2 Query: 35 PRAHWVGVKFCQSDSLSP--GKSVEVSQPIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259 PRAHWVGVKFCQSD GK+V + P+KK QYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA Sbjct: 97 PRAHWVGVKFCQSDPNGAVLGKAV-AAHPLKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 172

Blast Hits to Contigs V2 ABall

Analysis Date: 11-02-2009 (Blast: AB454_contigs_v2_vs_ABall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.

Match Name	E value	Identity
ABall_contig6115_v2	9.70758e-58	100.00%
ABall_contig6115_v2
HSP 1 Score: 215.509 bits (464), Expect = 9.70758e-58 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1 Query: 1 SRRH*HSLYVPSSSLGWGQVLSIGFTSWEVCGGVTAHKEEPKRTQVELTVSWCNVLPENWSLGVSHMGLWKASLSGWIHCTC 258 SRRH*HSLYVPSSSLGWGQVLSIGFTSWEVCGGVTAHKEEPKRTQVELTVSWCNVLPENWSLGVSHMGLWKASLSGWIHCTC Sbjct: 1 SRRH*HSLYVPSSSLGWGQVLSIGFTSWEVCGGVTAHKEEPKRTQVELTVSWCNVLPENWSLGVSHMGLWKASLSGWIHCTC 258 HSP 2 Score: 212.301 bits (457), Expect = 8.96712e-57 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = -3 Query: 3 HVQCQIHPDKLAFHNPICETPSDQFSGKTLHHDTVSSTWVLFGSSLWAVTPPQTSQDVNPIDKTPQPSELEGTRLCYQCLL 257 HVQCQIHPDKLAFHNPICETPSDQFSGKTLHHDTVSSTWVLFGSSLWAVTPPQTSQDVNPIDKTPQPSELEGTRLCYQCLL Sbjct: 3 HVQCQIHPDKLAFHNPICETPSDQFSGKTLHHDTVSSTWVLFGSSLWAVTPPQTSQDVNPIDKTPQPSELEGTRLCYQCLL 257 HSP 3 Score: 205.428 bits (442), Expect = 1.05116e-54 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = -2 Query: 1 ACAVSNPPRTCFPQSHMDSQRPVLRNVTPRYCELLDLGPLRLFFMGCDTSTDFPGLSESDQNLTPTQARGNVEAVLSVPPT 258 ACAVSNPPRTCFPQSHMDSQRPVLRNVTPRYCELLDLGPLRLFFMGCDTSTDFPGLSESDQNLTPTQARGNVEAVLSVPPT Sbjct: 1 ACAVSNPPRTCFPQSHMDSQRPVLRNVTPRYCELLDLGPLRLFFMGCDTSTDFPGLSESDQNLTPTQARGNVEAVLSVPPT 258 HSP 4* Score: 199.472 bits (429), Expect = 6.52859e-53 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = -1 Query: 2 CMCSVKSTQINLLSTIPYVRLPATSSPVKRYTTILAPRPGSSSALLYGLHLHRLPRTKIRLTKLDPNPVSSRERRGCVISASY 259 CMCSVKSTQINLLSTIPYVRLPATSSPVKRYTTILAPRPGSSSALLYGLHLHRLPRTKIRLTKLDPNPVSSRERRGCVISASY Sbjct: 2 CMCSVKSTQINLLSTIPYVRLPATSSPVKRYTTILAPRPGSSSALLYGLHLHRLPRTKIRLTKLDPNPVSSRERRGCVISASY 259 HSP 5* Score: 198.097 bits (426), Expect = 1.69287e-52 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 3 Query: 3 EALITQPLRSLELTGLGSSFVNRIHLVLGSLWRCHSPRRAEEDPGLGAHSIVVRFTGELVAGSLTYGIVESKFIWVDLTLHM 257 EALITQPLRSLELTGLGSSFVNRIHLVLGSLWRCHSPRRAEEDPGLGAHSIVVRFTGELVAGSLTYGIVESKFIWVDLTLHM Sbjct: 3 EALITQPLRSLELTGLGSSFVNRIHLVLGSLWRCHSPRRAEEDPGLGAHSIVVRFTGELVAGSLTYGIVESKFIWVDLTLHM 257 HSP 6* Score: 192.14 bits (413), Expect = 1.05141e-50 Identity = 76/86 (88.37%), Postives = 76/86 (88.37%), Query Frame = 2 Query: 2 VGGTDNTASTFPRAHWVGVKFCQSDSLSPGKSVEVSQPIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259 VGGTDNTASTFPRAHWVGVKFCQSDSLSPGKSVEVSQPIKK QYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA Sbjct: 2 VGGTDNTASTFPRAHWVGVKFCQSDSLSPGKSVEVSQPIKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259

Match Name

E value

Identity

ABall_contig6115_v2

9.70758e-58

100.00%

ABall_contig6115_v2

HSP 1

Score: 215.509 bits (464), Expect = 9.70758e-58
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1

Query:    1 SRRH**HSLYVPSSSLGWGQVLSIGFT*SWEVCGGVTAHKEEPKRTQV*ELTVSWCNVLPENWSLGVSHMGLWKASLSGWI*HCTC 258
            SRRH**HSLYVPSSSLGWGQVLSIGFT*SWEVCGGVTAHKEEPKRTQV*ELTVSWCNVLPENWSLGVSHMGLWKASLSGWI*HCTC
Sbjct:    1 SRRH**HSLYVPSSSLGWGQVLSIGFT*SWEVCGGVTAHKEEPKRTQV*ELTVSWCNVLPENWSLGVSHMGLWKASLSGWI*HCTC 258

HSP 2

Score: 212.301 bits (457), Expect = 8.96712e-57
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = -3

Query:    3 HVQCQIHPDKLAFHNPICETPSDQFSGKTLHHDTVSS*TWVLFGSSLWAVTPPQTSQD*VNPIDKT*PQPSELEGT*RLCYQCLL 257
            HVQCQIHPDKLAFHNPICETPSDQFSGKTLHHDTVSS*TWVLFGSSLWAVTPPQTSQD*VNPIDKT*PQPSELEGT*RLCYQCLL
Sbjct:    3 HVQCQIHPDKLAFHNPICETPSDQFSGKTLHHDTVSS*TWVLFGSSLWAVTPPQTSQD*VNPIDKT*PQPSELEGT*RLCYQCLL 257

HSP 3

Score: 205.428 bits (442), Expect = 1.05116e-54
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = -2

Query:    1 ACAVSNPPR*TCFPQSHM*DSQRPVLR*NVTPRYCELLDLGPLRLFFMGCDTSTDFPGLSESD*QNLTPTQ*ARGNVEAVLSVPPT 258
            ACAVSNPPR*TCFPQSHM*DSQRPVLR*NVTPRYCELLDLGPLRLFFMGCDTSTDFPGLSESD*QNLTPTQ*ARGNVEAVLSVPPT
Sbjct:    1 ACAVSNPPR*TCFPQSHM*DSQRPVLR*NVTPRYCELLDLGPLRLFFMGCDTSTDFPGLSESD*QNLTPTQ*ARGNVEAVLSVPPT 258

HSP 4

Score: 199.472 bits (429), Expect = 6.52859e-53
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = -1

Query:    2 CMCSVKSTQINLLSTIPYVRLPATSSPVKRYTTIL*APRPGSSSALLYGL*HLHRLPRTK*IRLTKLDPNPVSSRERRGCVISASY 259
            CMCSVKSTQINLLSTIPYVRLPATSSPVKRYTTIL*APRPGSSSALLYGL*HLHRLPRTK*IRLTKLDPNPVSSRERRGCVISASY
Sbjct:    2 CMCSVKSTQINLLSTIPYVRLPATSSPVKRYTTIL*APRPGSSSALLYGL*HLHRLPRTK*IRLTKLDPNPVSSRERRGCVISASY 259

HSP 5

Score: 198.097 bits (426), Expect = 1.69287e-52
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 3

Query:    3 *EALITQPLRSLELTGLGSSFVNRIHLVLGSLWRCHSP*RRAEEDPGLGAHSIVV*RFTGELVAGSLTYGIVESKFIWVDLTLHM 257
            *EALITQPLRSLELTGLGSSFVNRIHLVLGSLWRCHSP*RRAEEDPGLGAHSIVV*RFTGELVAGSLTYGIVESKFIWVDLTLHM
Sbjct:    3 *EALITQPLRSLELTGLGSSFVNRIHLVLGSLWRCHSP*RRAEEDPGLGAHSIVV*RFTGELVAGSLTYGIVESKFIWVDLTLHM 257

HSP 6

Score: 192.14 bits (413), Expect = 1.05141e-50
Identity = 76/86 (88.37%), Postives = 76/86 (88.37%), Query Frame = 2

Query:    2 VGGTDNTASTFPRAHWVGVKFCQSDSLSPGKSVEVSQPIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259
            VGGTDNTASTFPRAHWVGVKFCQSDSLSPGKSVEVSQPIKK          QYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA
Sbjct:    2 VGGTDNTASTFPRAHWVGVKFCQSDSLSPGKSVEVSQPIKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259

Blast Hits to Contigs V2 AC454

Analysis Date: 11-02-2009 (Blast: AB454_contigs_v2_vs_AC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.

Match Name	E value	Identity
AC454_contig5246_v2	5.56153e-40	95.59%
AC454_contig5246_v2
HSP 1 Score: 158.691 bits (340), Expect = 5.56153e-40 Identity = 65/68 (95.59%), Postives = 66/68 (97.06%), Query Frame = -2 Query: 55 ACAVSNPPRTCFPQSHMDSQRPVLRNVTPRYCELLDLGPLRLFFMGCDTSTDFPGLSESDQNLT 258 ACAVSNPPRTCFPQSHMDSQRPVLRNVTPRYCELLDLGP RLFFMGC+TSTDFPGLSESD QNLT Sbjct: 210 ACAVSNPPRTCFPQSHMDSQRPVLRNVTPRYCELLDLGPRRLFFMGCETSTDFPGLSESDWQNLT 413 HSP 2 Score: 144.028 bits (308), Expect = 1.44244e-35 Identity = 57/68 (83.82%), Postives = 58/68 (85.29%), Query Frame = 2 Query: 56 VKFCQSDSLSPGKSVEVSQPIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259 VKFCQSDSLSPGKSVEVSQP+KK QYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA Sbjct: 209 VKFCQSDSLSPGKSVEVSQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 412 HSP 3 Score: 140.363 bits (300), Expect = 1.83052e-34 Identity = 55/68 (80.88%), Postives = 60/68 (88.24%), Query Frame = 1 Query: 55 GQVLSIGFTSWEVCGGVTAHKEEPKRTQVELTVSWCNVLPENWSLGVSHMGLWKASLSGWIHCTC 258 G VL IGF W+VCGG+TAH+EEP RT+VE TVS C+VLPENW LGVSHMGLWKASLSGWIHCTC Sbjct: 210 GVLPIGFAPWKVCGGLTAHEEEPPRTKVEFTVSRCHVLPENWPLGVSHMGLWKASLSGWIHCTC 413 HSP 4 Score: 131.657 bits (281), Expect = 7.64417e-32 Identity = 56/68 (82.35%), Postives = 57/68 (83.82%), Query Frame = -3 Query: 54 HVQCQIHPDKLAFHNPICETPSDQFSGKTLHHDTVSSTWVLFGSSLWAVTPPQTSQDVNPIDKTP 257 HVQCQIHPDKLAFHNPICETPS QFSGKT H DTV+ST VL GSS WAV PPQT Q * NPI KTP Sbjct: 211 HVQCQIHPDKLAFHNPICETPSGQFSGKTHLDTVNSTLVLGGSSSWAVRPPQTFQGANPIGKTP 414 HSP 5* Score: 130.282 bits (278), Expect = 1.98214e-31 Identity = 56/69 (81.16%), Postives = 57/69 (82.61%), Query Frame = 3 Query: 51 LGSSFVNRIHLVLGSLWRCHSPRRAEEDPGLGAHSIVVRFTGELVAGSLTYGIVESKFIWVDLTLHM 257 +G SF NRI L L SLWR HSPRRA ED GLG HSI V RFTGEL AGSLTYGIVESKFIWVDLTLHM Sbjct: 211 VGLSFANRIRLALESLWRSHSPRRAAEDQGLGVHSIEVSRFTGELAAGSLTYGIVESKFIWVDLTLHM 417 HSP 6 Score: 124.784 bits (266), Expect = 8.96083e-30 Identity = 56/69 (81.16%), Postives = 60/69 (86.96%), Query Frame = -1 Query: 53 CMCSVKSTQINLLSTIPYVRLPATSSPVKRYTTILAPRPGSSSALLYGLHLHRLPRTKIRLTKLDP 259 CMCSVKSTQINLLSTIPYVRLPA SSPVKR T+IL PRP SS+ALL+GL* LHRL R K IRL KL+P Sbjct: 209 CMCSVKSTQINLLSTIPYVRLPAASSPVKRDTSILTPRPWSSAALLHGLDLHRLSRAKRIRLAKLNP 415
AC454_contig32365_v2	8.96499e-22	75.51%
AC454_contig32365_v2
HSP 1 Score: 98.2075 bits (208), Expect = 8.96499e-22 Identity = 37/49 (75.51%), Postives = 38/49 (77.55%), Query Frame = 2 Query: 113 PIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259 P+KK QYR VTFYRRTGRWESHIWDCGKQVYLGGFDTAHA Sbjct: 17 PVKKSRRGPRSRSSQYRXVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 163 HSP 2 Score: 78.9628 bits (166), Expect = 5.56929e-16 Identity = 35/47 (74.47%), Postives = 37/47 (78.72%), Query Frame = -2 Query: 112 AVSNPPRTCFPQSHMDSQRPVLRNVTPRYCELLDLGPLRLFFMG 252 AVSNPP+ TCFPQS +DS RPVL * VT RY EL DLGPL LFF G Sbjct: 24 AVSNPPKYTCFPQSQIDSHRPVLLKVTXRYELRDLGPLLLFFTG 164 HSP 3* Score: 74.3807 bits (156), Expect = 1.33397e-14 Identity = 27/50 (54.00%), Postives = 41/50 (82.00%), Query Frame = 1 Query: 109 TAHKEEPKRTQVELTVSWCNVLPENWSLGVSHMGLWKASLSGWIHCTC 258 TA +EE +RT+V E +V C+ L ++WS+G+S++GLW+AS+ GWIHC+C Sbjct: 18 TAGEEEERTKVSEFSVPGCHFLKDWSMGISYLGLWEASVFGWIHCSC 167

Blast Hits to Contigs V2 CC454

Analysis Date: 11-02-2009 (Blast: AB454_contigs_v2_vs_CC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.

Match Name	E value	Identity
CC454_contig47181_v2	5.63226e-33	87.04%
CC454_contig47181_v2
HSP 1 Score: 114.245 bits (243), Expect = 5.63226e-33 Identity = 47/54 (87.04%), Postives = 49/54 (90.74%), Query Frame = -2 Query: 52 SHMDSQRPVLRNVTPRYCELLDLGPLRLFFMGCDTSTDFPGLSESDQNLTP 213 +HMDSQRPVL NVTPRYCELLDLGP RLFFMGC+TSTDFPGLSESD Q L P Sbjct: 227 NHMDSQRPVLLNVTPRYCELLDLGPRRLFFMGCETSTDFPGLSESDWQKLNP 388 HSP 2* Score: 31.3091 bits (62), Expect = 5.63226e-33 Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = -2 Query: 22 QNLTPTQARGNVEA 66 +NLTPTQARGNV A Sbjct: 375 KNLTPTQARGNVAA 419 HSP 3* Score: 28.1016 bits (55), Expect = 5.63226e-33 Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = -3 Query: 210 HPDKLAFHNP 239 +PDKLAFHNP Sbjct: 76 YPDKLAFHNP 105 HSP 4 Score: 101.873 bits (216), Expect = 9.22913e-32 Identity = 40/54 (74.07%), Postives = 43/54 (79.63%), Query Frame = 2 Query: 50 VGVKFCQSDSLSPGKSVEVSQPIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIW 211 +G+ FCQSDSLSPGKSVEVSQP+KK QYRGVTFYRRTGRWESHIW Sbjct: 229 LGLSFCQSDSLSPGKSVEVSQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIW 390 HSP 5 Score: 38.1822 bits (77), Expect = 9.22913e-32 Identity = 13/15 (86.67%), Postives = 15/15 (100.00%), Query Frame = 2 Query: 20 TASTFPRAHWVGVKF 64 +A+TFPRAHWVGVKF Sbjct: 377 SAATFPRAHWVGVKF 421 HSP 6 Score: 29.4763 bits (58), Expect = 9.22913e-32 Identity = 12/15 (80.00%), Postives = 12/15 (80.00%), Query Frame = 3 Query: 201 LTYGIVESKFIWVDL 245 L GIVESKFIWV L Sbjct: 70 LNVGIVESKFIWVRL 114 HSP 7 Score: 86.7523 bits (183), Expect = 2.37977e-22 Identity = 35/49 (71.43%), Postives = 40/49 (81.63%), Query Frame = 1 Query: 64 LSIGFTSWEVCGGVTAHKEEPKRTQVELTVSWCNVLPENWSLGVSHM 210 L IGF * W+VCGG+ AH+EEP RT+VE TVS C+VL ENW LGVSHM Sbjct: 230 LPIGFAPWKVCGGLAAHEEEPPRTKVEFTVSRCHVLENWPLGVSHM 376 HSP 8 Score: 26.727 bits (52), Expect = 2.37977e-22 Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 2 Query: 212 DCGKQVYLG 238 DCGKQVYLG Sbjct: 77 DCGKQVYLG 103 HSP 9 Score: 23.9778 bits (46), Expect = 2.37977e-22 Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 28 YVPSSSLGWGQVLS 69 YV S SLGWG V + Sbjct: 372 YVSSGSLGWGVFA 413 HSP 10* Score: 85.3777 bits (180), Expect = 2.22221e-19 Identity = 39/55 (70.91%), Postives = 39/55 (70.91%), Query Frame = 3 Query: 48 GLGSSFVNRIHLVLGSLWRCHSPRRAEEDPGLGAHSIVVRFTGELVAGSLTYG 212 G G F NRI L L SLWR SPRRA ED GLG HSI V RF GEL AGSLTYG Sbjct: 228 GWGVFANRIRLALESLWRSRSPRRAAEDQGLGVHSIEVSRFIGELAAGSLTYG 392 HSP 11* Score: 24.8942 bits (48), Expect = 2.22221e-19 Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 1 Query: 211 GLWKASLSG 237 GLWKASLSG Sbjct: 78 GLWKASLSG 104 HSP 12 Score: 84.4613 bits (178), Expect = 3.03635e-19 Identity = 39/60 (65.00%), Postives = 43/60 (71.67%), Query Frame = -1 Query: 32 PYVRLPATSSPVKRYTTILAPRPGSSSALLYGLHLHRLPRTKIRLTKLDPNPVSSRE 211 PYVRLPA SSP+KR T+IL PRP SS+ALL+GL LHRL R K IRL K P P E Sbjct: 229 PYVRLPAASSPIKRDTSILTPRPWSSAALLHGLRDLHRLSRAKRIRLAKTPQPSEPEE 408 HSP 13 Score: 25.3524 bits (49), Expect = 3.03635e-19 Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = -2 Query: 211 PRTCFPQS 237 PRTCFPQS Sbjct: 78 PRTCFPQS 104 HSP 14* Score: 75.7553 bits (159), Expect = 7.10087e-19 Identity = 35/49 (71.43%), Postives = 36/49 (73.47%), Query Frame = -3 Query: 63 ICETPSDQFSGKTLHHDTVSSTWVLFGSSLWAVTPPQTSQDVNPIDK 209 ICETPS QFS KT H DTV+ST VL GSS WA PPQT Q NPI K Sbjct: 231 ICETPSGQFSYKTHLDTVNSTLVLGGSSSWAARPPQTFQGANPIGK 377 HSP 15* Score: 24.8942 bits (48), Expect = 7.10087e-19 Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = -1 Query: 209 TQINLLSTIP 238 TQINLLSTIP Sbjct: 77 TQINLLSTIP 106 HSP 16 Score: 24.8942 bits (48), Expect = 7.10087e-19 Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = -1 Query: 29 KLDPNPVSSRER 64 KL+PNPVS R+R Sbjct: 377 KLNPNPVSPRKR 412

Match Name

E value

Identity

CC454_contig47181_v2

5.63226e-33

87.04%

CC454_contig47181_v2

HSP 1

Score: 114.245 bits (243), Expect = 5.63226e-33
Identity = 47/54 (87.04%), Postives = 49/54 (90.74%), Query Frame = -2

Query:   52 SHM*DSQRPVLR*NVTPRYCELLDLGPLRLFFMGCDTSTDFPGLSESD*QNLTP 213
            +HM*DSQRPVL *NVTPRYCELLDLGP RLFFMGC+TSTDFPGLSESD Q L P
Sbjct:  227 NHM*DSQRPVLL*NVTPRYCELLDLGPRRLFFMGCETSTDFPGLSESDWQKLNP 388

HSP 2

Score: 31.3091 bits (62), Expect = 5.63226e-33
Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = -2

Query:   22 QNLTPTQ*ARGNVEA 66
            +NLTPTQ*ARGNV A
Sbjct:  375 KNLTPTQ*ARGNVAA 419

HSP 3

Score: 28.1016 bits (55), Expect = 5.63226e-33
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = -3

Query:  210 HPDKLAFHNP 239
            +PDKLAFHNP
Sbjct:   76 YPDKLAFHNP 105

HSP 4

Score: 101.873 bits (216), Expect = 9.22913e-32
Identity = 40/54 (74.07%), Postives = 43/54 (79.63%), Query Frame = 2

Query:   50 VGVKFCQSDSLSPGKSVEVSQPIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIW 211
            +G+ FCQSDSLSPGKSVEVSQP+KK          QYRGVTFYRRTGRWESHIW
Sbjct:  229 LGLSFCQSDSLSPGKSVEVSQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIW 390

HSP 5

Score: 38.1822 bits (77), Expect = 9.22913e-32
Identity = 13/15 (86.67%), Postives = 15/15 (100.00%), Query Frame = 2

Query:   20 TASTFPRAHWVGVKF 64
            +A+TFPRAHWVGVKF
Sbjct:  377 SAATFPRAHWVGVKF 421

HSP 6

Score: 29.4763 bits (58), Expect = 9.22913e-32
Identity = 12/15 (80.00%), Postives = 12/15 (80.00%), Query Frame = 3

Query:  201 LTYGIVESKFIWVDL 245
            L  GIVESKFIWV L
Sbjct:   70 LNVGIVESKFIWVRL 114

HSP 7

Score: 86.7523 bits (183), Expect = 2.37977e-22
Identity = 35/49 (71.43%), Postives = 40/49 (81.63%), Query Frame = 1

Query:   64 LSIGFT*SWEVCGGVTAHKEEPKRTQV*ELTVSWCNVLPENWSLGVSHM 210
            L IGF * W+VCGG+ AH+EEP RT+V*E TVS C+VL ENW LGVSHM
Sbjct:  230 LPIGFA*PWKVCGGLAAHEEEPPRTKV*EFTVSRCHVL*ENWPLGVSHM 376

HSP 8

Score: 26.727 bits (52), Expect = 2.37977e-22
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 2

Query:  212 DCGKQVYLG 238
            DCGKQVYLG
Sbjct:   77 DCGKQVYLG 103

HSP 9

Score: 23.9778 bits (46), Expect = 2.37977e-22
Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 1

Query:   28 YVPSSSLGWGQVLS 69
            YV S SLGWG V +
Sbjct:  372 YVSSGSLGWG*VFA 413

HSP 10

Score: 85.3777 bits (180), Expect = 2.22221e-19
Identity = 39/55 (70.91%), Postives = 39/55 (70.91%), Query Frame = 3

Query:   48 GLGSSFVNRIHLVLGSLWRCHSP*RRAEEDPGLGAHSIVV*RFTGELVAGSLTYG 212
            G G  F NRI L L SLWR  SP*RRA ED GLG HSI V RF GEL AGSLTYG
Sbjct:  228 GWG*VFANRIRLALESLWRSRSP*RRAAEDQGLGVHSIEVSRFIGELAAGSLTYG 392

HSP 11

Score: 24.8942 bits (48), Expect = 2.22221e-19
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 1

Query:  211 GLWKASLSG 237
            GLWKASLSG
Sbjct:   78 GLWKASLSG 104

HSP 12

Score: 84.4613 bits (178), Expect = 3.03635e-19
Identity = 39/60 (65.00%), Postives = 43/60 (71.67%), Query Frame = -1

Query:   32 PYVRLPATSSPVKRYTTIL*APRPGSSSALLYGL*HLHRLPRTK*IRLTKLDPNPVSSRE 211
            PYVRLPA SSP+KR T+IL* PRP SS+ALL+GL  LHRL R K IRL K  P P    E
Sbjct:  229 PYVRLPAASSPIKRDTSIL*TPRPWSSAALLHGLRDLHRLSRAKRIRLAKT*PQPSEPEE 408

HSP 13

Score: 25.3524 bits (49), Expect = 3.03635e-19
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = -2

Query:  211 PR*TCFPQS 237
            PR*TCFPQS
Sbjct:   78 PR*TCFPQS 104

HSP 14

Score: 75.7553 bits (159), Expect = 7.10087e-19
Identity = 35/49 (71.43%), Postives = 36/49 (73.47%), Query Frame = -3

Query:   63 ICETPSDQFSGKTLHHDTVSS*TWVLFGSSLWAVTPPQTSQD*VNPIDK 209
            ICETPS QFS KT H DTV+S*T VL GSS WA  PPQT Q * NPI K
Sbjct:  231 ICETPSGQFSYKT*HLDTVNS*TLVLGGSSSWAARPPQTFQG*ANPIGK 377

HSP 15

Score: 24.8942 bits (48), Expect = 7.10087e-19
Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = -1

Query:  209 TQINLLSTIP 238
            TQINLLSTIP
Sbjct:   77 TQINLLSTIP 106

HSP 16

Score: 24.8942 bits (48), Expect = 7.10087e-19
Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = -1

Query:   29 KLDPNPVSSRER 64
            KL+PNPVS R+R
Sbjct:  377 KLNPNPVSPRKR 412

Blast Hits to Contigs V2 CCall

Analysis Date: 11-02-2009 (Blast: AB454_contigs_v2_vs_CCall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.

Match Name	E value	Identity
CCall_contig46502_v2	5.84417e-33	87.04%
CCall_contig46502_v2
HSP 1 Score: 114.245 bits (243), Expect = 5.84417e-33 Identity = 47/54 (87.04%), Postives = 49/54 (90.74%), Query Frame = -2 Query: 52 SHMDSQRPVLRNVTPRYCELLDLGPLRLFFMGCDTSTDFPGLSESDQNLTP 213 +HMDSQRPVL NVTPRYCELLDLGP RLFFMGC+TSTDFPGLSESD Q L P Sbjct: 227 NHMDSQRPVLLNVTPRYCELLDLGPRRLFFMGCETSTDFPGLSESDWQKLNP 388 HSP 2* Score: 31.3091 bits (62), Expect = 5.84417e-33 Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = -2 Query: 22 QNLTPTQARGNVEA 66 +NLTPTQARGNV A Sbjct: 375 KNLTPTQARGNVAA 419 HSP 3* Score: 28.1016 bits (55), Expect = 5.84417e-33 Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = -3 Query: 210 HPDKLAFHNP 239 +PDKLAFHNP Sbjct: 76 YPDKLAFHNP 105 HSP 4 Score: 101.873 bits (216), Expect = 9.57638e-32 Identity = 40/54 (74.07%), Postives = 43/54 (79.63%), Query Frame = 2 Query: 50 VGVKFCQSDSLSPGKSVEVSQPIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIW 211 +G+ FCQSDSLSPGKSVEVSQP+KK QYRGVTFYRRTGRWESHIW Sbjct: 229 LGLSFCQSDSLSPGKSVEVSQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIW 390 HSP 5 Score: 38.1822 bits (77), Expect = 9.57638e-32 Identity = 13/15 (86.67%), Postives = 15/15 (100.00%), Query Frame = 2 Query: 20 TASTFPRAHWVGVKF 64 +A+TFPRAHWVGVKF Sbjct: 377 SAATFPRAHWVGVKF 421 HSP 6 Score: 29.4763 bits (58), Expect = 9.57638e-32 Identity = 12/15 (80.00%), Postives = 12/15 (80.00%), Query Frame = 3 Query: 201 LTYGIVESKFIWVDL 245 L GIVESKFIWV L Sbjct: 70 LNVGIVESKFIWVRL 114 HSP 7 Score: 86.7523 bits (183), Expect = 2.46931e-22 Identity = 35/49 (71.43%), Postives = 40/49 (81.63%), Query Frame = 1 Query: 64 LSIGFTSWEVCGGVTAHKEEPKRTQVELTVSWCNVLPENWSLGVSHM 210 L IGF * W+VCGG+ AH+EEP RT+VE TVS C+VL ENW LGVSHM Sbjct: 230 LPIGFAPWKVCGGLAAHEEEPPRTKVEFTVSRCHVLENWPLGVSHM 376 HSP 8 Score: 26.727 bits (52), Expect = 2.46931e-22 Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 2 Query: 212 DCGKQVYLG 238 DCGKQVYLG Sbjct: 77 DCGKQVYLG 103 HSP 9 Score: 23.9778 bits (46), Expect = 2.46931e-22 Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 28 YVPSSSLGWGQVLS 69 YV S SLGWG V + Sbjct: 372 YVSSGSLGWGVFA 413 HSP 10* Score: 85.3777 bits (180), Expect = 2.30582e-19 Identity = 39/55 (70.91%), Postives = 39/55 (70.91%), Query Frame = 3 Query: 48 GLGSSFVNRIHLVLGSLWRCHSPRRAEEDPGLGAHSIVVRFTGELVAGSLTYG 212 G G F NRI L L SLWR SPRRA ED GLG HSI V RF GEL AGSLTYG Sbjct: 228 GWGVFANRIRLALESLWRSRSPRRAAEDQGLGVHSIEVSRFIGELAAGSLTYG 392 HSP 11* Score: 24.8942 bits (48), Expect = 2.30582e-19 Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 1 Query: 211 GLWKASLSG 237 GLWKASLSG Sbjct: 78 GLWKASLSG 104 HSP 12 Score: 84.4613 bits (178), Expect = 3.15059e-19 Identity = 39/60 (65.00%), Postives = 43/60 (71.67%), Query Frame = -1 Query: 32 PYVRLPATSSPVKRYTTILAPRPGSSSALLYGLHLHRLPRTKIRLTKLDPNPVSSRE 211 PYVRLPA SSP+KR T+IL PRP SS+ALL+GL LHRL R K IRL K P P E Sbjct: 229 PYVRLPAASSPIKRDTSILTPRPWSSAALLHGLRDLHRLSRAKRIRLAKTPQPSEPEE 408 HSP 13 Score: 25.3524 bits (49), Expect = 3.15059e-19 Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = -2 Query: 211 PRTCFPQS 237 PRTCFPQS Sbjct: 78 PRTCFPQS 104 HSP 14* Score: 75.7553 bits (159), Expect = 7.36805e-19 Identity = 35/49 (71.43%), Postives = 36/49 (73.47%), Query Frame = -3 Query: 63 ICETPSDQFSGKTLHHDTVSSTWVLFGSSLWAVTPPQTSQDVNPIDK 209 ICETPS QFS KT H DTV+ST VL GSS WA PPQT Q NPI K Sbjct: 231 ICETPSGQFSYKTHLDTVNSTLVLGGSSSWAARPPQTFQGANPIGK 377 HSP 15* Score: 24.8942 bits (48), Expect = 7.36805e-19 Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = -1 Query: 209 TQINLLSTIP 238 TQINLLSTIP Sbjct: 77 TQINLLSTIP 106 HSP 16 Score: 24.8942 bits (48), Expect = 7.36805e-19 Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = -1 Query: 29 KLDPNPVSSRER 64 KL+PNPVS R+R Sbjct: 377 KLNPNPVSPRKR 412

Match Name

E value

Identity

CCall_contig46502_v2

5.84417e-33

87.04%

CCall_contig46502_v2

HSP 1

Score: 114.245 bits (243), Expect = 5.84417e-33
Identity = 47/54 (87.04%), Postives = 49/54 (90.74%), Query Frame = -2

Query:   52 SHM*DSQRPVLR*NVTPRYCELLDLGPLRLFFMGCDTSTDFPGLSESD*QNLTP 213
            +HM*DSQRPVL *NVTPRYCELLDLGP RLFFMGC+TSTDFPGLSESD Q L P
Sbjct:  227 NHM*DSQRPVLL*NVTPRYCELLDLGPRRLFFMGCETSTDFPGLSESDWQKLNP 388

HSP 2

Score: 31.3091 bits (62), Expect = 5.84417e-33
Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = -2

Query:   22 QNLTPTQ*ARGNVEA 66
            +NLTPTQ*ARGNV A
Sbjct:  375 KNLTPTQ*ARGNVAA 419

HSP 3

Score: 28.1016 bits (55), Expect = 5.84417e-33
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = -3

Query:  210 HPDKLAFHNP 239
            +PDKLAFHNP
Sbjct:   76 YPDKLAFHNP 105

HSP 4

Score: 101.873 bits (216), Expect = 9.57638e-32
Identity = 40/54 (74.07%), Postives = 43/54 (79.63%), Query Frame = 2

Query:   50 VGVKFCQSDSLSPGKSVEVSQPIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIW 211
            +G+ FCQSDSLSPGKSVEVSQP+KK          QYRGVTFYRRTGRWESHIW
Sbjct:  229 LGLSFCQSDSLSPGKSVEVSQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIW 390

HSP 5

Score: 38.1822 bits (77), Expect = 9.57638e-32
Identity = 13/15 (86.67%), Postives = 15/15 (100.00%), Query Frame = 2

Query:   20 TASTFPRAHWVGVKF 64
            +A+TFPRAHWVGVKF
Sbjct:  377 SAATFPRAHWVGVKF 421

HSP 6

Score: 29.4763 bits (58), Expect = 9.57638e-32
Identity = 12/15 (80.00%), Postives = 12/15 (80.00%), Query Frame = 3

Query:  201 LTYGIVESKFIWVDL 245
            L  GIVESKFIWV L
Sbjct:   70 LNVGIVESKFIWVRL 114

HSP 7

Score: 86.7523 bits (183), Expect = 2.46931e-22
Identity = 35/49 (71.43%), Postives = 40/49 (81.63%), Query Frame = 1

Query:   64 LSIGFT*SWEVCGGVTAHKEEPKRTQV*ELTVSWCNVLPENWSLGVSHM 210
            L IGF * W+VCGG+ AH+EEP RT+V*E TVS C+VL ENW LGVSHM
Sbjct:  230 LPIGFA*PWKVCGGLAAHEEEPPRTKV*EFTVSRCHVL*ENWPLGVSHM 376

HSP 8

Score: 26.727 bits (52), Expect = 2.46931e-22
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 2

Query:  212 DCGKQVYLG 238
            DCGKQVYLG
Sbjct:   77 DCGKQVYLG 103

HSP 9

Score: 23.9778 bits (46), Expect = 2.46931e-22
Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 1

Query:   28 YVPSSSLGWGQVLS 69
            YV S SLGWG V +
Sbjct:  372 YVSSGSLGWG*VFA 413

HSP 10

Score: 85.3777 bits (180), Expect = 2.30582e-19
Identity = 39/55 (70.91%), Postives = 39/55 (70.91%), Query Frame = 3

Query:   48 GLGSSFVNRIHLVLGSLWRCHSP*RRAEEDPGLGAHSIVV*RFTGELVAGSLTYG 212
            G G  F NRI L L SLWR  SP*RRA ED GLG HSI V RF GEL AGSLTYG
Sbjct:  228 GWG*VFANRIRLALESLWRSRSP*RRAAEDQGLGVHSIEVSRFIGELAAGSLTYG 392

HSP 11

Score: 24.8942 bits (48), Expect = 2.30582e-19
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 1

Query:  211 GLWKASLSG 237
            GLWKASLSG
Sbjct:   78 GLWKASLSG 104

HSP 12

Score: 84.4613 bits (178), Expect = 3.15059e-19
Identity = 39/60 (65.00%), Postives = 43/60 (71.67%), Query Frame = -1

Query:   32 PYVRLPATSSPVKRYTTIL*APRPGSSSALLYGL*HLHRLPRTK*IRLTKLDPNPVSSRE 211
            PYVRLPA SSP+KR T+IL* PRP SS+ALL+GL  LHRL R K IRL K  P P    E
Sbjct:  229 PYVRLPAASSPIKRDTSIL*TPRPWSSAALLHGLRDLHRLSRAKRIRLAKT*PQPSEPEE 408

HSP 13

Score: 25.3524 bits (49), Expect = 3.15059e-19
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = -2

Query:  211 PR*TCFPQS 237
            PR*TCFPQS
Sbjct:   78 PR*TCFPQS 104

HSP 14

Score: 75.7553 bits (159), Expect = 7.36805e-19
Identity = 35/49 (71.43%), Postives = 36/49 (73.47%), Query Frame = -3

Query:   63 ICETPSDQFSGKTLHHDTVSS*TWVLFGSSLWAVTPPQTSQD*VNPIDK 209
            ICETPS QFS KT H DTV+S*T VL GSS WA  PPQT Q * NPI K
Sbjct:  231 ICETPSGQFSYKT*HLDTVNS*TLVLGGSSSWAARPPQTFQG*ANPIGK 377

HSP 15

Score: 24.8942 bits (48), Expect = 7.36805e-19
Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = -1

Query:  209 TQINLLSTIP 238
            TQINLLSTIP
Sbjct:   77 TQINLLSTIP 106

HSP 16

Score: 24.8942 bits (48), Expect = 7.36805e-19
Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = -1

Query:   29 KLDPNPVSSRER 64
            KL+PNPVS R+R
Sbjct:  377 KLNPNPVSPRKR 412

Blast Hits to MedicagoProt

Analysis Date: 11-02-2009 (Blast: AB454_contigs_v2_vs_MedicagoProt_20080227)
Best 10 Hits Shown
Note: Click a description for more details.

Match Name	E value	Identity
IMGA\|CR955007_2.4 Pathogene	9.56722e-33	72.62%
is-related transcriptional factor and ERF chr05_pseudomolecule_IMGAG_V2 5937325-5940825 E EGN_Mt071002 20080227
HSP 1 Score: 134.42 bits (337), Expect = 9.56722e-33 Identity = 61/84 (72.62%), Postives = 67/84 (79.76%), Query Frame = 2 Query: 8 GTDNTASTFPRAHWVGVKFCQSDSLSPGKSVEVSQPIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259 G +S+FPRAHWVGVKFCQS+S++ GK VE SQP+KK QYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA Sbjct: 103 GGGGGSSSFPRAHWVGVKFCQSESVNGGKIVEASQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 186
IMGA\|AC145164_12.4 Pathogene	3.52948e-19	71.43%
is-related transcriptional factor and ERF chr04_pseudomolecule_IMGAG_V2 14697735-14694034 E EGN_Mt071002 20080227
HSP 1 Score: 89.3521 bits (220), Expect = 3.52948e-19 Identity = 40/56 (71.43%), Postives = 42/56 (75.00%), Query Frame = 2 Query: 92 KSVEVSQPIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259 K V+ Q +KK QYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA Sbjct: 110 KIVQAPQQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 165
IMGA\|AC165216_1.4 Pathogene	2.98789e-18	76.00%
is-related transcriptional factor and ERF chr07_pseudomolecule_IMGAG_V2 25923675-25920635 H EGN_Mt071002 20080227
HSP 1 Score: 86.2705 bits (212), Expect = 2.98789e-18 Identity = 38/50 (76.00%), Postives = 39/50 (78.00%), Query Frame = 2 Query: 110 QPIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259 Q +KK QYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA Sbjct: 124 QQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 173

Blast Hits to Contig V2 Oall

Analysis Date: 11-02-2009 (Blast: AB454_contigs_v2_vs_Oall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.

Match Name	E value	Identity
Oall_contig7661_v2	9.0735e-45	92.41%
Oall_contig7661_v2
HSP 1 Score: 175.187 bits (376), Expect = 9.0735e-45 Identity = 73/79 (92.41%), Postives = 75/79 (94.94%), Query Frame = -2 Query: 22 ACAVSNPPRTCFPQSHMDSQRPVLRNVTPRYCELLDLGPLRLFFMGCDTSTDFPGLSESDQNLTPTQARGNVEA 258 ACAVSNPP+TCFPQSHMDSQRPVLRNVTPRYCELLDLGP RLFFMGC+TST FPGLSESD QNLTPTQARGNV A Sbjct: 2 ACAVSNPPKTCFPQSHMDSQRPVLRNVTPRYCELLDLGPRRLFFMGCETSTHFPGLSESDWQNLTPTQARGNVAA 238 HSP 2* Score: 170.146 bits (365), Expect = 2.98576e-43 Identity = 66/80 (82.50%), Postives = 69/80 (86.25%), Query Frame = 2 Query: 20 TASTFPRAHWVGVKFCQSDSLSPGKSVEVSQPIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259 +A+TFPRAHWVGVKFCQSDSLSPGK VEVSQP+KK QYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA Sbjct: 1 SAATFPRAHWVGVKFCQSDSLSPGKCVEVSQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 240 HSP 3 Score: 157.316 bits (337), Expect = 2.17381e-39 Identity = 62/77 (80.52%), Postives = 67/77 (87.01%), Query Frame = 1 Query: 28 YVPSSSLGWGQVLSIGFTSWEVCGGVTAHKEEPKRTQVELTVSWCNVLPENWSLGVSHMGLWKASLSGWIHCTC 258 YV S SLGWG VL IGF W+VCGG+TAH+EEP RT+VELTVS C+VLPENW LGVSHMGLWKASL GWIHCTC Sbjct: 2 YVSSGSLGWGVLPIGFAPWKVCGGLTAHEEEPPRTKVELTVSRCHVLPENWPLGVSHMGLWKASLFGWIHCTC 232 HSP 4 Score: 143.112 bits (306), Expect = 4.10384e-35 Identity = 63/77 (81.82%), Postives = 64/77 (83.12%), Query Frame = 3 Query: 27 LRSLELTGLGSSFVNRIHLVLGSLWRCHSPRRAEEDPGLGAHSIVVRFTGELVAGSLTYGIVESKFIWVDLTLHM 257 LR L LTGLG SF NRI L L S+WR HSPRRA ED GLGAHSI V RFTGEL AGSLTYGIVESKFIWVDLTLHM Sbjct: 3 LRFLGLTGLGLSFANRIRLALESVWRSHSPRRAAEDQGLGAHSIEVSRFTGELAAGSLTYGIVESKFIWVDLTLHM 233 HSP 5 Score: 141.279 bits (302), Expect = 1.46194e-34 Identity = 62/78 (79.49%), Postives = 64/78 (82.05%), Query Frame = -3 Query: 24 HVQCQIHPDKLAFHNPICETPSDQFSGKTLHHDTVSSTWVLFGSSLWAVTPPQTSQDVNPIDKTPQPSELEGTR 257 HVQCQIHP+KLAFHNPICETPS QFSGKT H DTVSST VL GSS WAV PP T Q NPI KTPQPSE E T+ Sbjct: 3 HVQCQIHPNKLAFHNPICETPSGQFSGKTHLDTVSSTLVLGGSSSWAVRPPHTFQGANPIGKTPQPSEPEETQ 236 HSP 6* Score: 138.072 bits (295), Expect = 1.35043e-33 Identity = 62/77 (80.52%), Postives = 67/77 (87.01%), Query Frame = -1 Query: 29 CMCSVKSTQINLLSTIPYVRLPATSSPVKRYTTILAPRPGSSSALLYGLHLHRLPRTKIRLTKLDPNPVSSRER 259 CMCSVKSTQINLLSTIPYVRLPA SSPVKR T+ILAPRP SS+ALL+GL* LH L R K IRL KL+PNPVS R+R Sbjct: 1 CMCSVKSTQINLLSTIPYVRLPAASSPVKRDTSILAPRPWSSAALLHGLDLHTLSRAKRIRLAKLNPNPVSPRKR 231
Oall_contig11840_v2	3.5041e-21	100.00%
Oall_contig11840_v2
HSP 1 Score: 96.8329 bits (205), Expect = 3.5041e-21 Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 2 Query: 155 QYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259 QYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA Sbjct: 265 QYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 369 HSP 2 Score: 84.4613 bits (178), Expect = 1.85699e-17 Identity = 36/48 (75.00%), Postives = 38/48 (79.17%), Query Frame = -2 Query: 109 AVSNPPRTCFPQSHMDSQRPVLRNVTPRYCELLDLGPLRLFFMGC 252 AVSNPP+ TCFPQSH+ DS RPVLRNVTPRY EL DLGP LF C Sbjct: 272 AVSNPPKYTCFPQSHICDSHRPVLRNVTPRYELRDLGPRLLFLACC 415 HSP 3 Score: 67.5076 bits (141), Expect = 2.35714e-12 Identity = 28/50 (56.00%), Postives = 38/50 (76.00%), Query Frame = 1 Query: 109 TAHKEEPKRTQVELTVSWCNVLPENWSLGVSHMGLWKASLSGWIHCTC 258 TA +E+ T V EL+V NVLPEN ++G+++MGLWKAS+ WIHC+C Sbjct: 266 TASQEKTGTVPELSVPGRNVLPENRAMGITYMGLWKASIFRWIHCSC 415

Blast Hits to Populus Trichocarpa Proteins

Analysis Date: 11-02-2009 (Blast: AB454_contigs_v2_vs_PopulusProt_JamboreeModels1_1)
Best 10 Hits Shown
Note: Click a description for more details.

Match Name	E value	Identity
gw1.V.4061.1	8.33988e-33	74.71%
jgi\|Poptr1_1\|208660\|gw1.V.4061.1
HSP 1 Score: 135.191 bits (339), Expect = 8.33988e-33 Identity = 65/87 (74.71%), Postives = 67/87 (77.01%), Query Frame = 2 Query: 2 VGGTDNTASTFPRAHWVGVKFCQSDS-LSPGKSVEVSQPIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259 VGG D FPRAHWVGVKFCQSDS L KS+EVSQP+KK QYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA Sbjct: 119 VGGGDGGGGGFPRAHWVGVKFCQSDSSLVSQKSMEVSQPLKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 205
grail3.0019003502	1.85793e-32	73.26%
jgi\|Poptr1_1\|655117\|grail3.0019003502
HSP 1 Score: 134.035 bits (336), Expect = 1.85793e-32 Identity = 63/86 (73.26%), Postives = 67/86 (77.91%), Query Frame = 2 Query: 5 GGTDNTASTFPRAHWVGVKFCQSDS-LSPGKSVEVSQPIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259 GG D FPRAHWVGVKFCQS+S L+ KS+EVSQP+KK QYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA Sbjct: 124 GGGDGVGGGFPRAHWVGVKFCQSESSLASQKSMEVSQPLKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 209
gw1.28.415.1	1.52695e-18	76.00%
jgi\|Poptr1_1\|281841\|gw1.28.415.1
HSP 1 Score: 87.8113 bits (216), Expect = 1.52695e-18 Identity = 38/50 (76.00%), Postives = 40/50 (80.00%), Query Frame = 2 Query: 110 QPIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259 +P+KK QYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA Sbjct: 2 KPVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 51
gw1.XVI.2655.1	1.52695e-18	76.00%
jgi\|Poptr1_1\|256716\|gw1.XVI.2655.1
HSP 1 Score: 87.8113 bits (216), Expect = 1.52695e-18 Identity = 38/50 (76.00%), Postives = 40/50 (80.00%), Query Frame = 2 Query: 110 QPIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259 +P+KK QYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA Sbjct: 5 KPVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 54

Blast Hits to Contig V2 RO454

Analysis Date: 11-02-2009 (Blast: AB454_contigs_v2_vs_RO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.

Match Name	E value	Identity
RO454_contig4940_v2	5.56584e-45	92.41%
RO454_contig4940_v2
HSP 1 Score: 175.187 bits (376), Expect = 5.56584e-45 Identity = 73/79 (92.41%), Postives = 75/79 (94.94%), Query Frame = -2 Query: 22 ACAVSNPPRTCFPQSHMDSQRPVLRNVTPRYCELLDLGPLRLFFMGCDTSTDFPGLSESDQNLTPTQARGNVEA 258 ACAVSNPP+TCFPQSHMDSQRPVLRNVTPRYCELLDLGP RLFFMGC+TST FPGLSESD QNLTPTQARGNV A Sbjct: 2 ACAVSNPPKTCFPQSHMDSQRPVLRNVTPRYCELLDLGPRRLFFMGCETSTHFPGLSESDWQNLTPTQARGNVAA 238 HSP 2* Score: 170.146 bits (365), Expect = 1.83151e-43 Identity = 66/80 (82.50%), Postives = 69/80 (86.25%), Query Frame = 2 Query: 20 TASTFPRAHWVGVKFCQSDSLSPGKSVEVSQPIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259 +A+TFPRAHWVGVKFCQSDSLSPGK VEVSQP+KK QYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA Sbjct: 1 SAATFPRAHWVGVKFCQSDSLSPGKCVEVSQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 240 HSP 3 Score: 157.316 bits (337), Expect = 1.33345e-39 Identity = 62/77 (80.52%), Postives = 67/77 (87.01%), Query Frame = 1 Query: 28 YVPSSSLGWGQVLSIGFTSWEVCGGVTAHKEEPKRTQVELTVSWCNVLPENWSLGVSHMGLWKASLSGWIHCTC 258 YV S SLGWG VL IGF W+VCGG+TAH+EEP RT+VELTVS C+VLPENW LGVSHMGLWKASL GWIHCTC Sbjct: 2 YVSSGSLGWGVLPIGFAPWKVCGGLTAHEEEPPRTKVELTVSRCHVLPENWPLGVSHMGLWKASLFGWIHCTC 232 HSP 4 Score: 143.112 bits (306), Expect = 2.51737e-35 Identity = 63/77 (81.82%), Postives = 64/77 (83.12%), Query Frame = 3 Query: 27 LRSLELTGLGSSFVNRIHLVLGSLWRCHSPRRAEEDPGLGAHSIVVRFTGELVAGSLTYGIVESKFIWVDLTLHM 257 LR L LTGLG SF NRI L L S+WR HSPRRA ED GLGAHSI V RFTGEL AGSLTYGIVESKFIWVDLTLHM Sbjct: 3 LRFLGLTGLGLSFANRIRLALESVWRSHSPRRAAEDQGLGAHSIEVSRFTGELAAGSLTYGIVESKFIWVDLTLHM 233 HSP 5 Score: 141.279 bits (302), Expect = 8.96777e-35 Identity = 62/78 (79.49%), Postives = 64/78 (82.05%), Query Frame = -3 Query: 24 HVQCQIHPDKLAFHNPICETPSDQFSGKTLHHDTVSSTWVLFGSSLWAVTPPQTSQDVNPIDKTPQPSELEGTR 257 HVQCQIHP+KLAFHNPICETPS QFSGKT H DTVSST VL GSS WAV PP T Q NPI KTPQPSE E T+ Sbjct: 3 HVQCQIHPNKLAFHNPICETPSGQFSGKTHLDTVSSTLVLGGSSSWAVRPPHTFQGANPIGKTPQPSEPEETQ 236 HSP 6* Score: 138.072 bits (295), Expect = 8.28373e-34 Identity = 62/77 (80.52%), Postives = 67/77 (87.01%), Query Frame = -1 Query: 29 CMCSVKSTQINLLSTIPYVRLPATSSPVKRYTTILAPRPGSSSALLYGLHLHRLPRTKIRLTKLDPNPVSSRER 259 CMCSVKSTQINLLSTIPYVRLPA SSPVKR T+ILAPRP SS+ALL+GL* LH L R K IRL KL+PNPVS R+R Sbjct: 1 CMCSVKSTQINLLSTIPYVRLPAASSPVKRDTSILAPRPWSSAALLHGLDLHTLSRAKRIRLAKLNPNPVSPRKR 231
RO454_contig7857_v2	2.14948e-21	100.00%
RO454_contig7857_v2
HSP 1 Score: 96.8329 bits (205), Expect = 2.14948e-21 Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 2 Query: 155 QYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259 QYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA Sbjct: 265 QYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 369 HSP 2 Score: 84.4613 bits (178), Expect = 1.13911e-17 Identity = 36/48 (75.00%), Postives = 38/48 (79.17%), Query Frame = -2 Query: 109 AVSNPPRTCFPQSHMDSQRPVLRNVTPRYCELLDLGPLRLFFMGC 252 AVSNPP+ TCFPQSH+ DS RPVLRNVTPRY EL DLGP LF C Sbjct: 272 AVSNPPKYTCFPQSHICDSHRPVLRNVTPRYELRDLGPRLLFLACC 415 HSP 3 Score: 67.5076 bits (141), Expect = 1.44591e-12 Identity = 28/50 (56.00%), Postives = 38/50 (76.00%), Query Frame = 1 Query: 109 TAHKEEPKRTQVELTVSWCNVLPENWSLGVSHMGLWKASLSGWIHCTC 258 TA +E+ T V EL+V NVLPEN ++G+++MGLWKAS+ WIHC+C Sbjct: 266 TASQEKTGTVPELSVPGRNVLPENRAMGITYMGLWKASIFRWIHCSC 415

Blast Hits to TAIR7 Peptides

Analysis Date: 11-02-2009 (Blast: AB454_contigs_v2_vs_TAIR7_pep_20070425)
Best 10 Hits Shown
Note: Click a description for more details.

Match Name	E value	Identity
AT4G36920.1	3.16157e-28	67.42%
AP2 (APETALA 2); transcription factor \| chr4:17400995-17403137 FORWARD
HSP 1 Score: 119.783 bits (299), Expect = 3.16157e-28 Identity = 60/89 (67.42%), Postives = 63/89 (70.79%), Query Frame = 2 Query: 23 ASTFPRAHWVGVKFCQSD---SLSPGKS-------VEVSQPIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259 AS FPRAHW GVKFCQSD S GK+ VE +QP+KK QYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA Sbjct: 77 ASGFPRAHWFGVKFCQSDLATGSSAGKATNVAAAVVEPAQPLKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 165
AT5G67180.1	2.42635e-20	60.26%
AP2 domain-containing transcription factor, putative \| chr5:26819345-26821160 REVERSE
HSP 1 Score: 93.5893 bits (231), Expect = 2.42635e-20 Identity = 47/78 (60.26%), Postives = 50/78 (64.10%), Query Frame = 2 Query: 35 PRAHWVGVKFC-QSDSLSPGK--SVEVSQPIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259 P W G +SD G+ E+S PIKK QYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA Sbjct: 53 PGVRWSGFNSVGKSDPSGSGRPEEPEISPPIKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 130
AT5G60120.1	1.57271e-19	78.43%
TOE2 (TARGET OF EAT1 2); DNA binding / transcription factor \| chr5:24225379-24228293 FORWARD
HSP 1 Score: 90.8929 bits (224), Expect = 1.57271e-19 Identity = 40/51 (78.43%), Postives = 41/51 (80.39%), Query Frame = 2 Query: 107 SQPIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259 SQP+KK QYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA Sbjct: 144 SQPVKKSRRGPRSKSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 194
AT2G28550.2	8.62976e-18	73.08%
TOE1 (TARGET OF EAT1 1); DNA binding / transcription factor \| chr2:12233521-12235328 REVERSE
HSP 1 Score: 85.1149 bits (209), Expect = 8.62976e-18 Identity = 38/52 (73.08%), Postives = 39/52 (75.00%), Query Frame = 2 Query: 104 VSQPIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259 V +KK QYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA Sbjct: 136 VPAQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 187
AT2G28550.1	8.62976e-18	73.08%
TOE1 (TARGET OF EAT1 1); DNA binding / transcription factor \| chr2:12233245-12235328 REVERSE
HSP 1 Score: 85.1149 bits (209), Expect = 8.62976e-18 Identity = 38/52 (73.08%), Postives = 39/52 (75.00%), Query Frame = 2 Query: 104 VSQPIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259 V +KK QYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA Sbjct: 136 VPAQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 187
AT3G54990.2	1.92251e-17	53.42%
SMZ (SCHLAFMUTZE) \| chr3:20386013-20387499 REVERSE
HSP 1 Score: 83.9593 bits (206), Expect = 1.92251e-17 Identity = 39/73 (53.42%), Postives = 47/73 (64.38%), Query Frame = 2 Query: 41 AHWVGVKFCQSDSLSPGKSVEVSQPIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259 +HW+ + Q ++ + +KK QYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTA+A Sbjct: 93 SHWLNLSSLQRNT---------QKMVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAYA 156
AT3G54990.1	1.92251e-17	53.42%
SMZ (SCHLAFMUTZE); DNA binding / transcription factor \| chr3:20384695-20387499 REVERSE
HSP 1 Score: 83.9593 bits (206), Expect = 1.92251e-17 Identity = 39/73 (53.42%), Postives = 47/73 (64.38%), Query Frame = 2 Query: 41 AHWVGVKFCQSDSLSPGKSVEVSQPIKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHA 259 +HW+ + Q ++ + +KK QYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTA+A Sbjct: 93 SHWLNLSSLQRNT---------QKMVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAYA 156
AT2G39250.1	1.37776e-15	96.97%
SNZ (SCHNARCHZAPFEN); DNA binding / transcription factor \| chr2:16396088-16398009 REVERSE
HSP 1 Score: 77.7962 bits (190), Expect = 1.37776e-15 Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = 2 Query: 158 YRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAH 256 YRGVTFYRRTGRWESHIWDCGKQVYLGGFDTA+ Sbjct: 109 YRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAY 141

Fagaceae Genomics Web

AB454_contig6024_v2

References

ESTs in this contig

GO terms assigned to this feature

KEGG Analysis

InterProScan Analysis

Blast Hits to Uniprot

Blast Hits to Contigs V2 ABall

Blast Hits to Contigs V2 AC454

Blast Hits to Contigs V2 CC454

Blast Hits to Contigs V2 CCall

Blast Hits to MedicagoProt

Blast Hits to Contig V2 Oall

Blast Hits to Populus Trichocarpa Proteins

Blast Hits to Contig V2 RO454

Blast Hits to TAIR7 Peptides

Organisms

Project Information

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