AB454_contig5509_v2

NameAB454_contig5509_v2
AccessionID1836340
Sequence
GGATACCTCACTCCACCTACCGCGCTGGAACTTGTTGGGCACTCAATCGC
ATGTGGATCACATCAATATTTTGATCCATATTATGGGGGAGTTATGCCTA
CTTATGGACCTCAGCCTTTGGTGCATTCTCGTTGTATTGGAGTGCATCCC
GCTAGAATGCCCTTGCCCCTTGAAATGGCAGAGGAACCTGTTTATGTGAA
TGCCAAGCAGTACCATGGAATTCTCAGGCGACGACAGTCACGTGCCAAGG
CTGAGCTTGAAAAGAAACTAATAAAAGTTaAGaAAAGCCCTATCTTCATG
AGTCTCGGCATTTGCATGCCATGAGAAGAGCAAGAGGTTCAGGTGGCCGT
TTCTGAACACAAAGAAGCTTGGTAGTACTGATGCTGACACTGCACCTGAC
AAAGGTGCCACCAATCCTGGTGGAGCTGTTTCAACACATCCCATTAATTC
ATTGCACCAACCACAAACATACCCCAATGCCAATGGCAACAGCTGCTACC
CACACCATCAAGGATTCCAGTTTTCTGGATATCATTTGCACTCAGGTGAT
AGGACAGGAAGGAGGGAGTATTTCGCGGGGCAGCAGGACGGGAAATACTT
ATGCTAGAAGG
Length611
Typecontig
Organism American Beech

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References

Dababase Accession
GFF_source SeqManPro

ESTs in this contig

Type Feature Position
EST ABWP1_057236_0086_1024 0-198
EST ABWP1_039641_0223_3571 165-377
EST ABWP2_089879_1874_2247 251-498
EST ABWP1_122265_0656_3440 385-611

GO terms assigned to this feature

Accession Category Term
GO:0005634 cellular_component nucleus
GO:0003700 molecular_function transcription factor activity

InterProScan Analysis

Analysis Date: 11-02-2009 (Interpro: AB454_contigs_v2)
SEQUENCE: AB454_contig5509_v2_1_ORF1 CRC64: E1AB92C5839CF9EA LENGTH: 107 aa
InterPro
IPR001289
Family
CCAAT-binding transcription factor, subunit B
PF02045 [61-99]T 1.5e-09 PF02045 CBFB_NFYA CBFB_NFYA
SM00521 [59-102]T 1.7e-06 SM00521 no description no description
SEQUENCE: AB454_contig5509_v2_2_ORF1 CRC64: 498628334F7A913F LENGTH: 65 aa
No hits reported.
SEQUENCE: AB454_contig5509_v2_2_ORF2 CRC64: D7C337E9ABD06862 LENGTH: 101 aa
No hits reported.
SEQUENCE: AB454_contig5509_v2_3_ORF2 CRC64: 2E2404D3300653D9 LENGTH: 85 aa
noIPR
unintegrated
unintegrated
seg [38-50]? NA seg seg seg
SEQUENCE: AB454_contig5509_v2_4_ORF2 CRC64: 3F9326C16062371F LENGTH: 75 aa
No hits reported.
SEQUENCE: AB454_contig5509_v2_4_ORF3 CRC64: EDEF2754AF319B71 LENGTH: 59 aa
No hits reported.
SEQUENCE: AB454_contig5509_v2_6_ORF1 CRC64: A474EEA7FB24C052 LENGTH: 55 aa
noIPR
unintegrated
unintegrated
seg [1-13]? NA seg seg seg
SEQUENCE: AB454_contig5509_v2_1_ORF1 CRC64: E1AB92C5839CF9EA LENGTH: 107 aa
InterPro
IPR001289
Family
CCAAT-binding transcription factor, subunit B
PFAMPF02045CBFB_NFYA
 1.5e-09 [61-99]T       
SMARTSM00521no description
 1.7e-06 [59-102]T       
Parent no parent
Children no children
Found in no entries
Contains IPR018362
GO terms Molecular Function: transcription factor activity (GO:0003700)
Cellular Component: nucleus (GO:0005634)
SEQUENCE: AB454_contig5509_v2_2_ORF1 CRC64: 498628334F7A913F LENGTH: 65 aa
No hits reported.
SEQUENCE: AB454_contig5509_v2_2_ORF2 CRC64: D7C337E9ABD06862 LENGTH: 101 aa
No hits reported.
SEQUENCE: AB454_contig5509_v2_3_ORF2 CRC64: 2E2404D3300653D9 LENGTH: 85 aa
noIPR
unintegrated
unintegrated
SEGseg seg
 NA [38-50]?       
Parent no parent
Children no children
Found in no entries
Contains no entries
GO terms none
SEQUENCE: AB454_contig5509_v2_4_ORF2 CRC64: 3F9326C16062371F LENGTH: 75 aa
No hits reported.
SEQUENCE: AB454_contig5509_v2_4_ORF3 CRC64: EDEF2754AF319B71 LENGTH: 59 aa
No hits reported.
SEQUENCE: AB454_contig5509_v2_6_ORF1 CRC64: A474EEA7FB24C052 LENGTH: 55 aa
noIPR
unintegrated
unintegrated
SEGseg seg
 NA [1-13]?       
Parent no parent
Children no children
Found in no entries
Contains no entries
GO terms none

Blast Hits to Uniprot

Analysis Date: 11-02-2009 (Blast: AB454_v2_uniprot)
Best 10 Hits Shown | Show Best 25 Hits | Show All Hits
Note: Click a description for more details.
Match Name E value Identity
A5BU97_VITVI1.34723e-4377.42%
Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_002755 PE=4 SV=1
HSP 1 
Score: 152.91 bits (385), Expect = 1.34723e-43
Identity = 72/93 (77.42%), Postives = 79/93 (84.95%), Query Frame = 1
Query:    7 LTPPTALELVGHSIACGSHQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            LT P  LELVGHSIAC S+ Y DPYYGG+M  YGPQPLVH   +G+H ARMPLPLEM ++PVYVN KQYHGILRRRQSRAKAELEKKLIKV+K
Sbjct:  217 LTQPPQLELVGHSIACASNPYQDPYYGGMMTAYGPQPLVHPHLLGMHEARMPLPLEMTQDPVYVNPKQYHGILRRRQSRAKAELEKKLIKVRK 309

HSP 2 
Score: 47.3654 bits (111), Expect = 1.34723e-43
Identity = 20/23 (86.96%), Postives = 21/23 (91.30%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRH HA+RRAR SGGRF
Sbjct:  309 KPYLHESRHQHALRRARSSGGRF 331

A7NZQ3_VITVI1.35087e-4377.42%
Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024601001 PE=4 SV=1
HSP 1 
Score: 152.91 bits (385), Expect = 1.35087e-43
Identity = 72/93 (77.42%), Postives = 79/93 (84.95%), Query Frame = 1
Query:    7 LTPPTALELVGHSIACGSHQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            LT P  LELVGHSIAC S+ Y DPYYGG+M  YGPQPLVH   +G+H ARMPLPLEM ++PVYVN KQYHGILRRRQSRAKAELEKKLIKV+K
Sbjct:  116 LTQPPQLELVGHSIACASNPYQDPYYGGMMTAYGPQPLVHPHLLGMHEARMPLPLEMTQDPVYVNPKQYHGILRRRQSRAKAELEKKLIKVRK 208

HSP 2 
Score: 47.3654 bits (111), Expect = 1.35087e-43
Identity = 20/23 (86.96%), Postives = 21/23 (91.30%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRH HA+RRAR SGGRF
Sbjct:  208 KPYLHESRHQHALRRARSSGGRF 230

A7Q299_VITVI2.26451e-4268.09%
Chromosome chr13 scaffold_45, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028796001 PE=4 SV=1
HSP 1 
Score: 132.88 bits (333), Expect = 2.26451e-42
Identity = 64/94 (68.09%), Postives = 74/94 (78.72%), Query Frame = 1
Query:    4 YLTPPTALELVGHSIACGSHQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            +L P + +ELVGHSI   S+ Y DP+  G+M +YGPQ +VH    G+H  RMPLPLEM EEPVYVNAKQYHGILRRRQSRAKAELEKK IKV+K
Sbjct:    4 HLEPNSQMELVGHSIVLTSYPYQDPHNVGIMTSYGPQAMVHPHLFGMHQPRMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKAIKVRK 97

HSP 2 
Score: 49.2914 bits (116), Expect = 2.26451e-42
Identity = 22/29 (75.86%), Postives = 23/29 (79.31%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF*TQRSL 371
            KPYLHESRH HAMRRARG GGRF   + L
Sbjct:   97 KPYLHESRHQHAMRRARGCGGRFLNTKKL 125

HSP 3 
Score: 34.6538 bits (78), Expect = 2.26451e-42
Identity = 19/47 (40.43%), Postives = 28/47 (59.57%), Query Frame = 2
Query:  350 FLNTKKLGSTDADTAPDKGATNPGGAVSTHPINSLHQPQTYPNANGN 490
            FLNTKKL + DA+T  +KG+ + G A+ST   +S        N++ N
Sbjct:  119 FLNTKKLDNNDANTTAEKGSVS-GAALSTQSASSSGSEHLPTNSSRN 164

A5PGU3_ANTMA1.18736e-3874.74%
YA4 OS=Antirrhinum majus GN=nf-YA PE=2 SV=1
HSP 1 
Score: 135.961 bits (341), Expect = 1.18736e-38
Identity = 71/95 (74.74%), Postives = 76/95 (80.00%), Query Frame = 1
Query:    1 GYLTPPTALELVGHSIACGSHQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            G LT P  LEL GHSIAC S+ Y D YYGG+M  YG QPLV S    +H  RMPLPLEMA+EPVYVNAKQYHGILRRRQSRAKAELEKKLIKV+K
Sbjct:  111 GSLTQPPQLELTGHSIACASNPY-DTYYGGMMAAYG-QPLVPSHLYEMHQTRMPLPLEMAQEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVRK 203

HSP 2 
Score: 47.7506 bits (112), Expect = 1.18736e-38
Identity = 20/23 (86.96%), Postives = 21/23 (91.30%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRH HA+RR RGSGGRF
Sbjct:  203 KPYLHESRHQHALRRERGSGGRF 225

A5ADH0_VITVI2.33079e-3772.37%
Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000211 PE=4 SV=1
HSP 1 
Score: 115.931 bits (289), Expect = 2.33079e-37
Identity = 55/76 (72.37%), Postives = 62/76 (81.58%), Query Frame = 1
Query:   58 SHQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            S+ Y DP+  G+M +YGPQ +VH    G+H  RMPLPLEM EEPVYVNAKQYHGILRRRQSRAKAELEKK IKV+K
Sbjct:   66 SYPYQDPHNVGIMTSYGPQAMVHPHLFGMHQPRMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKAIKVRK 141

HSP 2 
Score: 49.2914 bits (116), Expect = 2.33079e-37
Identity = 22/29 (75.86%), Postives = 23/29 (79.31%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF*TQRSL 371
            KPYLHESRH HAMRRARG GGRF   + L
Sbjct:  141 KPYLHESRHQHAMRRARGCGGRFLNTKKL 169

HSP 3 
Score: 34.6538 bits (78), Expect = 2.33079e-37
Identity = 19/47 (40.43%), Postives = 28/47 (59.57%), Query Frame = 2
Query:  350 FLNTKKLGSTDADTAPDKGATNPGGAVSTHPINSLHQPQTYPNANGN 490
            FLNTKKL + DA+T  +KG+ + G A+ST   +S        N++ N
Sbjct:  163 FLNTKKLDNNDANTTAEKGSVS-GAALSTQSASSSGSEHLPTNSSRN 208

B9RID0_RICCO3.69385e-3770.97%
Nuclear transcription factor Y subunit A-1, putative OS=Ricinus communis GN=RCOM_1578050 PE=4 SV=1
HSP 1 
Score: 127.872 bits (320), Expect = 3.69385e-37
Identity = 66/93 (70.97%), Postives = 74/93 (79.57%), Query Frame = 1
Query:    7 LTPPTALELVGHSIACGSHQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            LT PT LELVGHSIAC S+ Y DPYYGG+M  YG QPL +   +G H  RM LP E+A+EPVYVNAKQY GILRRRQ+RAKAE EKKLIKV+K
Sbjct:  117 LTQPTQLELVGHSIACASNPYQDPYYGGMMAPYGHQPLGYP-FLGGHQVRMALPNEIAQEPVYVNAKQYPGILRRRQARAKAEHEKKLIKVRK 208

HSP 2 
Score: 50.8322 bits (120), Expect = 3.69385e-37
Identity = 22/23 (95.65%), Postives = 22/23 (95.65%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRH HAMRRARGSGGRF
Sbjct:  208 KPYLHESRHQHAMRRARGSGGRF 230

B9HNQ1_POPTR5.40754e-3664.21%
Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_767936 PE=4 SV=1
HSP 1 
Score: 124.02 bits (310), Expect = 5.40754e-36
Identity = 61/95 (64.21%), Postives = 74/95 (77.89%), Query Frame = 1
Query:    1 GYLTPPTALELVGHSIACGSHQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            G+L P + +ELVGHSI   SH Y DP YGG+  +YG Q +V  +  G+  ARMPLPLEM EEPVYVNAKQ+HGI+RRRQ+RAKAELEKK +KV+K
Sbjct:  110 GHLEPNSQMELVGHSIVLTSHPYTDPQYGGMFASYGAQAMV-PQLYGMPHARMPLPLEMEEEPVYVNAKQFHGIMRRRQARAKAELEKKAVKVRK 203

HSP 2 
Score: 48.1358 bits (113), Expect = 5.40754e-36
Identity = 21/29 (72.41%), Postives = 23/29 (79.31%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF*TQRSL 371
            KPYLHESRH HA+RRARG GGRF   + L
Sbjct:  203 KPYLHESRHQHALRRARGCGGRFLNTKKL 231

HSP 3 
Score: 23.0978 bits (48), Expect = 5.40754e-36
Identity = 20/87 (22.99%), Postives = 34/87 (39.08%), Query Frame = 2
Query:  350 FLNTKKLGSTDADTAPDKG---ATNPGGAVSTHPINSLHQPQTYPNANGNSCYPHHQGFQFSGYHLHSGDRTGRREYFAGQQDGKYL 601
            FLNTKKL ++  +   +KG     N      +  ++     +   + N +      +G Q S     +G     R Y +   DG +L
Sbjct:  225 FLNTKKLDNSATNPTSEKGINSVANISKQSYSFSVSECFPTEGSGDLNSSGDLEEGKGSQASSNGHGNGHALSSR-YHSSSHDGSFL 310

B9RVQ7_RICCO4.31574e-3561.05%
Nuclear transcription factor Y subunit A-1, putative OS=Ricinus communis GN=RCOM_0968980 PE=4 SV=1
HSP 1 
Score: 122.865 bits (307), Expect = 4.31574e-35
Identity = 58/95 (61.05%), Postives = 74/95 (77.89%), Query Frame = 1
Query:    1 GYLTPPTALELVGHSIACGSHQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            G++ P + +ELVGHSI   S+ Y D  YGG++P+Y PQ +V  +  G+H ARM LPLEM EEPVYVNAKQ++GILRRRQ+RAKAE+EKK IK +K
Sbjct:  107 GHVEPNSQMELVGHSIVLTSYPYSDAQYGGMLPSYAPQAMVTPQLYGMHHARMALPLEMEEEPVYVNAKQFNGILRRRQARAKAEIEKKAIKARK 201

HSP 2 
Score: 48.9062 bits (115), Expect = 4.31574e-35
Identity = 21/23 (91.30%), Postives = 21/23 (91.30%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRH HAMRRARG GGRF
Sbjct:  201 KPYLHESRHQHAMRRARGCGGRF 223

A9S234_PHYPA4.63108e-3464.21%
Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_162379 PE=4 SV=1
HSP 1 
Score: 119.783 bits (299), Expect = 4.63108e-34
Identity = 61/95 (64.21%), Postives = 72/95 (75.79%), Query Frame = 1
Query:    4 YLTPPTALELVGHSIACGSHQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAEE-PVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            YL P T LEL GHS+A  ++ + DPY+GG++  YG Q ++H   +GV  ARMPLP EM EE PVYVNAKQYHGILRRRQSRAKAE E KLIK +K
Sbjct:  129 YLLPHTQLEL-GHSMARAAYPFADPYFGGIVAAYGAQAVIHPHMLGVQQARMPLPSEMMEEEPVYVNAKQYHGILRRRQSRAKAESENKLIKSRK 222

HSP 2 
Score: 48.521 bits (114), Expect = 4.63108e-34
Identity = 20/23 (86.96%), Postives = 22/23 (95.65%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRH HA+RRARG+GGRF
Sbjct:  222 KPYLHESRHQHALRRARGNGGRF 244

C0PQJ9_PICSI4.65415e-3461.05%
Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1
HSP 1 
Score: 117.857 bits (294), Expect = 4.65415e-34
Identity = 58/95 (61.05%), Postives = 69/95 (72.63%), Query Frame = 1
Query:    4 YLTPPTALELVGHSIACGSHQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMA-EEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            YL P   LE   HSIAC ++ Y +PY+GG++  Y  Q ++H   +GV  ARMPLPL+M  EEPVYVNAKQYHGILRRRQ RAKAE E KLIK +K
Sbjct:  128 YLVPHAQLEF-NHSIACAAYPYAEPYFGGILAAYPAQAMIHPNMLGVQQARMPLPLDMTEEEPVYVNAKQYHGILRRRQLRAKAESENKLIKTRK 221

HSP 2 
Score: 50.447 bits (119), Expect = 4.65415e-34
Identity = 22/29 (75.86%), Postives = 24/29 (82.76%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF*TQRSL 371
            KPYLHESRHLHAM+RARG GGRF   + L
Sbjct:  221 KPYLHESRHLHAMKRARGCGGRFLNTKKL 249

Blast Hits to Contigs V2 ABall

Analysis Date: 11-02-2009 (Blast: AB454_contigs_v2_vs_ABall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
ABall_contig5602_v29.92231e-144100.00%
ABall_contig5602_v2
HSP 1 
Score: 502.806 bits (1091), Expect = 9.92231e-144
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = -3
Query:    1 F*HKYFPSCCPAKYSLLPVLSPECK*YPENWNP*WCG*QLLPLALGYVCGWCNELMGCVETAPPGLVAPLSGAVSASVLPSFFVFRNGHLNLLLFSWHANAETHEDRAFLNFY*FLFKLSLGT*LSSPENSMVLLGIHINRFLCHFKGQGHSSGMHSNTTRMHQRLRSISRHNSPIIWIKILM*STCD*VPNKFQRGRWSEVS 609
            F*HKYFPSCCPAKYSLLPVLSPECK*YPENWNP*WCG*QLLPLALGYVCGWCNELMGCVETAPPGLVAPLSGAVSASVLPSFFVFRNGHLNLLLFSWHANAETHEDRAFLNFY*FLFKLSLGT*LSSPENSMVLLGIHINRFLCHFKGQGHSSGMHSNTTRMHQRLRSISRHNSPIIWIKILM*STCD*VPNKFQRGRWSEVS
Sbjct:    1 F*HKYFPSCCPAKYSLLPVLSPECK*YPENWNP*WCG*QLLPLALGYVCGWCNELMGCVETAPPGLVAPLSGAVSASVLPSFFVFRNGHLNLLLFSWHANAETHEDRAFLNFY*FLFKLSLGT*LSSPENSMVLLGIHINRFLCHFKGQGHSSGMHSNTTRMHQRLRSISRHNSPIIWIKILM*STCD*VPNKFQRGRWSEVS 609

HSP 2 
Score: 478.521 bits (1038), Expect = 2.02835e-136
Identity = 195/203 (96.06%), Postives = 195/203 (96.06%), Query Frame = 1
Query:    1 GYLTPPTALELVGHSIACGSHQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKKSPIFMSLGICMPXXXXXXXXAVSEHKEAW*Y*C*HCT*QRCHQSWWSCFNTSH*FIAPTTNIPQCQWQQLLPTPSRIPVFWISFALR**DRKEGVFRGAAGREILMLE 609
            GYLTPPTALELVGHSIACGSHQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKKSPIFMSLGICMP        AVSEHKEAW*Y*C*HCT*QRCHQSWWSCFNTSH*FIAPTTNIPQCQWQQLLPTPSRIPVFWISFALR**DRKEGVFRGAAGREILMLE
Sbjct:    1 GYLTPPTALELVGHSIACGSHQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKKSPIFMSLGICMP*EEQEVQVAVSEHKEAW*Y*C*HCT*QRCHQSWWSCFNTSH*FIAPTTNIPQCQWQQLLPTPSRIPVFWISFALR**DRKEGVFRGAAGREILMLE 609

HSP 3 
Score: 275.534 bits (595), Expect = 7.77315e-132
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 2
Query:  287 ALSS*VSAFACHEKSKRFRWPFLNTKKLGSTDADTAPDKGATNPGGAVSTHPINSLHQPQTYPNANGNSCYPHHQGFQFSGYHLHSGDRTGRREYFAGQQDGKYLC*K 610
            ALSS*VSAFACHEKSKRFRWPFLNTKKLGSTDADTAPDKGATNPGGAVSTHPINSLHQPQTYPNANGNSCYPHHQGFQFSGYHLHSGDRTGRREYFAGQQDGKYLC*K
Sbjct:  287 ALSS*VSAFACHEKSKRFRWPFLNTKKLGSTDADTAPDKGATNPGGAVSTHPINSLHQPQTYPNANGNSCYPHHQGFQFSGYHLHSGDRTGRREYFAGQQDGKYLC*K 610

HSP 4 
Score: 210.01 bits (452), Expect = 7.77315e-132
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 2
Query:    2 DTSLHLPRWNLLGTQSHVDHINILIHIMGELCLLMDLSLWCILVVLECIPLECPCPLKWQRNLFM*MPSSTMEFSGDDSHVP 247
            DTSLHLPRWNLLGTQSHVDHINILIHIMGELCLLMDLSLWCILVVLECIPLECPCPLKWQRNLFM*MPSSTMEFSGDDSHVP
Sbjct:    2 DTSLHLPRWNLLGTQSHVDHINILIHIMGELCLLMDLSLWCILVVLECIPLECPCPLKWQRNLFM*MPSSTMEFSGDDSHVP 247

HSP 5 
Score: 453.777 bits (984), Expect = 5.69647e-129
Identity = 190/203 (93.60%), Postives = 190/203 (93.60%), Query Frame = 3
Query:    3 IPHSTYRAGTCWALNRMWITSIF*SILWGSYAYLWTSAFGAFSLYWSASR*NALAP*NGRGTCLCECQAVPWNSQATTVTCQG*A*KETNKS*EKPYLHESRHLHAMRRARGSGGRF*TQRSLVVLMLTLHLTKVPPILVELFQHIPLIHCTNHKXXXXXXXXXXXXXIKDSSFLDIICTQVIGQEGGSISRGSRTGNTYARR 611
            IPHSTYRAGTCWALNRMWITSIF*SILWGSYAYLWTSAFGAFSLYWSASR*NALAP*NGRGTCLCECQAVPWNSQATTVTCQG*A*KETNKS*EKPYLHESRHLHAMRRARGSGGRF*TQRSLVVLMLTLHLTKVPPILVELFQHIPLIHCTNHK             IKDSSFLDIICTQVIGQEGGSISRGSRTGNTYARR
Sbjct:    3 IPHSTYRAGTCWALNRMWITSIF*SILWGSYAYLWTSAFGAFSLYWSASR*NALAP*NGRGTCLCECQAVPWNSQATTVTCQG*A*KETNKS*EKPYLHESRHLHAMRRARGSGGRF*TQRSLVVLMLTLHLTKVPPILVELFQHIPLIHCTNHKHTPMPMATAATHTIKDSSFLDIICTQVIGQEGGSISRGSRTGNTYARR 611

HSP 6 
Score: 440.948 bits (956), Expect = 4.14737e-125
Identity = 194/203 (95.57%), Postives = 194/203 (95.57%), Query Frame = -2
Query:    2 LLA*VFPVLLPREILPPSCPIT*VQMISRKLESLMVWXXXXXXXXXVCLWLVQ*INGMC*NSSTRIGGTFVRCSVSISTTKLLCVQKRPPEPLALLMACKCRDS*R*GFS*LLLVSFQAQPWHVTVVA*EFHGTAWHSHKQVPLPFQGARAF*RDALQYNENAPKAEVHK*A*LPHNMDQNIDVIHMRLSAQQVPAR*VE*GI 610
            LLA*VFPVLLPREILPPSCPIT*VQMISRKLESLMVW         VCLWLVQ*INGMC*NSSTRIGGTFVRCSVSISTTKLLCVQKRPPEPLALLMACKCRDS*R*GFS*LLLVSFQAQPWHVTVVA*EFHGTAWHSHKQVPLPFQGARAF*RDALQYNENAPKAEVHK*A*LPHNMDQNIDVIHMRLSAQQVPAR*VE*GI
Sbjct:    2 LLA*VFPVLLPREILPPSCPIT*VQMISRKLESLMVWVAAVAIGIGVCLWLVQ*INGMC*NSSTRIGGTFVRCSVSISTTKLLCVQKRPPEPLALLMACKCRDS*R*GFS*LLLVSFQAQPWHVTVVA*EFHGTAWHSHKQVPLPFQGARAF*RDALQYNENAPKAEVHK*A*LPHNMDQNIDVIHMRLSAQQVPAR*VE*GI 610

HSP 7 
Score: 222.382 bits (479), Expect = 5.1121e-109
Identity = 94/107 (87.85%), Postives = 94/107 (87.85%), Query Frame = -1
Query:    3 HGMQMPRLMKIGXXXXXXXXXXXXXLARDCRRLRIPWYCLAFT*TGSSAISRGKGILAGCTPIQRECTKG*GP*VGITPP*YGSKY*CDPHAIECPTSSSAVGGVRY 323
            HGMQMPRLMKIG             LARDCRRLRIPWYCLAFT*TGSSAISRGKGILAGCTPIQRECTKG*GP*VGITPP*YGSKY*CDPHAIECPTSSSAVGGVRY
Sbjct:    3 HGMQMPRLMKIGLFLTFISFFSSSALARDCRRLRIPWYCLAFT*TGSSAISRGKGILAGCTPIQRECTKG*GP*VGITPP*YGSKY*CDPHAIECPTSSSAVGGVRY 323

HSP 8 
Score: 187.1 bits (402), Expect = 5.1121e-109
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = -1
Query:  369 NTPSFLSYHLSANDIQKTGILDGVGSSCCHWHWGMFVVGAMN*WDVLKQLHQDWWHLCQVQCQHQYYQ 572
            NTPSFLSYHLSANDIQKTGILDGVGSSCCHWHWGMFVVGAMN*WDVLKQLHQDWWHLCQVQCQHQYYQ
Sbjct:  369 NTPSFLSYHLSANDIQKTGILDGVGSSCCHWHWGMFVVGAMN*WDVLKQLHQDWWHLCQVQCQHQYYQ 572

Blast Hits to Contigs V2 AC454

Analysis Date: 11-02-2009 (Blast: AB454_contigs_v2_vs_AC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
AC454_contig31367_v25.14067e-2172.73%
AC454_contig31367_v2
HSP 1 
Score: 63.3837 bits (132), Expect = 5.14067e-21
Identity = 24/33 (72.73%), Postives = 28/33 (84.85%), Query Frame = 1
Query:  187 PVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            P+YVN KQYHGILRRRQSRAK E + KL+K +K
Sbjct:   31 PIYVNPKQYHGILRRRQSRAKLEAQNKLVKARK 129

HSP 2 
Score: 31.3091 bits (62), Expect = 5.14067e-21
Identity = 10/28 (35.71%), Postives = 20/28 (71.43%), Query Frame = 1
Query:   40 HSIACGSHQYFDPYYGGVMPTYGPQPLV 123
            +S+A   + Y +P +GG++ +YGPQ ++
Sbjct:  184 YSMARVPYPYAEPCFGGLLTSYGPQAIM 267

HSP 3 
Score: 29.9345 bits (59), Expect = 5.14067e-21
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 3
Query:  285 KPYLHESRHLH 317
            KPYLHESRH H
Sbjct:    1 KPYLHESRHRH 33

HSP 4 
Score: 25.3524 bits (49), Expect = 5.14067e-21
Identity = 8/16 (50.00%), Postives = 13/16 (81.25%), Query Frame = 1
Query:  136 IGVHPARMPLPLEMAE 183
            +G+ PAR+PLPL+  +
Sbjct:  136 MGMAPARVPLPLDFTD 183

AC454_contig32057_v24.03074e-1751.61%
AC454_contig32057_v2
HSP 1 
Score: 84.4613 bits (178), Expect = 4.03074e-17
Identity = 32/62 (51.61%), Postives = 44/62 (70.97%), Query Frame = 1
Query:    4 YLTPPTALELVGHSIACGSHQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAEEP 189
            +L P + +ELVGHSI    + Y DP+YGG++  YG Q ++ ++  G+H ARMPLPLEM EEP
Sbjct:    1 HLDPNSNMELVGHSIVLTPYMYSDPHYGGMLAPYGHQAMIPAQLYGMHQARMPLPLEMEEEP 186

HSP 2 
Score: 69.3404 bits (145), Expect = 1.43623e-12
Identity = 32/62 (51.61%), Postives = 39/62 (62.90%), Query Frame = 2
Query:    2 DTSLHLPRWNLLGTQSHVDHINILIHIMGELCLLMDLSLWCILVVLECIPLECPCPLKWQRN 187
            +TS+  P WNLL TQ +  HI I IHIM E  LLM + L  +   +ECI LEC   LKW+RN
Sbjct:    3 NTSIQTPTWNLLVTQLY*HHICIQIHIMAECWLLMGIKL*YLPNYMECIRLECLYLLKWKRN 188

HSP 3 
Score: 65.2165 bits (136), Expect = 2.504e-11
Identity = 27/61 (44.26%), Postives = 36/61 (59.02%), Query Frame = 3
Query:    6 PHSTYRAGTCWALNRMWITSIF*SILWGSYAYLWTSAFGAFSLYWSASR*NALAP*NGRGT 188
            P S  + GTCW+LN +    +F S LW +   LW S++    + W+AS *NA   *NGRGT
Sbjct:    2 PRSKLQHGTCWSLNCIDTIYVFRSTLWRNVGSLWASSYDTCPIIWNASG*NAFTS*NGRGT 184

AC454_contig19312_v23.81743e-1379.31%
AC454_contig19312_v2
HSP 1 
Score: 58.8016 bits (122), Expect = 3.81743e-13
Identity = 23/29 (79.31%), Postives = 24/29 (82.76%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF*TQRSL 371
            KPYLHESRHLHAMRRARG GGRF   + L
Sbjct:  316 KPYLHESRHLHAMRRARGCGGRFLNTKKL 402

HSP 2 
Score: 31.3091 bits (62), Expect = 3.81743e-13
Identity = 13/16 (81.25%), Postives = 15/16 (93.75%), Query Frame = 1
Query:  238 SRAKAELEKKLIKVKK 285
            SRAKAEL+KK IKV+K
Sbjct:  400 SRAKAELQKKAIKVRK 447

Blast Hits to Contigs V2 CC454

Analysis Date: 11-02-2009 (Blast: AB454_contigs_v2_vs_CC454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
CC454_contig1853_v21.01187e-4863.83%
CC454_contig1853_v2
HSP 1 
Score: 149.985 bits (321), Expect = 1.01187e-48
Identity = 60/94 (63.83%), Postives = 75/94 (79.79%), Query Frame = 1
Query:    4 YLTPPTALELVGHSIACGSHQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            +L P + +ELVGHSI    + Y DP+YGG++  YG Q ++ ++  G+H ARMPLPLEM EEPV+VNAKQYHGILRRRQSRAKAEL+KK IKV+K
Sbjct:  796 HLDPNSXMELVGHSIVLTPYMYSDPHYGGMLAPYGHQAMIPAQLYGMHQARMPLPLEMEEEPVFVNAKQYHGILRRRQSRAKAELQKKAIKVRK 1077

HSP 2 
Score: 60.6344 bits (126), Expect = 1.01187e-48
Identity = 24/36 (66.67%), Postives = 28/36 (77.78%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF*TQRSLVVLMLTL 392
            KPYLHESRHLHAMRRARG GG F   R L+++ + L
Sbjct:  691 KPYLHESRHLHAMRRARGCGGAFLIXRXLIMMPILL 798

HSP 3 
Score: 87.2105 bits (184), Expect = 1.47969e-27
Identity = 46/92 (50.00%), Postives = 57/92 (61.96%), Query Frame = -3
Query:    4 NFY*FLFKLSLGT*LSSPENSMVLLGIHINRFLCHFKGQGHSSGMHSNTTRMHQRLRSISRHNSPIIWIKILM*STCD*VPNKFQRGRWSEV 279
            NFY FL KLSL T*LSS +N+M+LL I+ +RFL HFK   HSS MHS     +  L  I   +S I+WI I +    +*V NKF  G W +V
Sbjct:  802 NFYRFLLKLSLST*LSSSQNTMILLCIYEDRFLFHFKR*RHSSLMHSI*LGRYHSLMPIRSQHSAIMWI*IHIWCQYN*VTNKFHXGVWIKV 1077

HSP 4 
Score: 52.3867 bits (108), Expect = 1.47969e-27
Identity = 20/28 (71.43%), Postives = 25/28 (89.29%), Query Frame = -2
Query:  284 LLCVQKRPPEPLALLMACKCRDS*R*GF 367
            LL ++K PP+PLALL+AC+CRDS*R GF
Sbjct:  716 LLXIKKAPPQPLALLIACRCRDS*RYGF 799

HSP 5 
Score: 101.873 bits (216), Expect = 2.76974e-27
Identity = 43/91 (47.25%), Postives = 59/91 (64.84%), Query Frame = 3
Query:    6 PHSTYRAGTCWALNRMWITSIF*SILWGSYAYLWTSAFGAFSLYWSASR*NALAP*NGRGTCLCECQAVPWNSQATTVTCQG*A*KETNKS 278
            P S  + GTCW+LN +    +F S LW +   LW S++    + W+AS *NA   *NGRGTCL +C+A+ W S+  TVTC G*A +E++KS
Sbjct:  803 P*SKLQHGTCWSLNCIDTIYVFRSTLWRNVGSLWASSYDTCPIIWNASG*NAFTS*NGRGTCLRKCKAISWYSETKTVTC*G*ASEESDKS 1075

HSP 6 
Score: 36.8076 bits (74), Expect = 2.76974e-27
Identity = 17/27 (62.96%), Postives = 20/27 (74.07%), Query Frame = 2
Query:  287 ALSS*VSAFACHEKSKRFRWPFLNTKK 367
            A+SS*VS  AC+E+ KR    FLNTKK
Sbjct:  716 AISS*VSTPACYEEGKRLWGRFLNTKK 796

HSP 7 
Score: 85.3777 bits (180), Expect = 7.5985e-22
Identity = 46/80 (57.50%), Postives = 49/80 (61.25%), Query Frame = -1
Query:    6 ARDCRRLRIPWYCLAFT*TGSSAISRGKGILAGCTPIQRECTKG*GP*VGITPP*YGSKY*CDPHAIECPTSSSAVGGVR 245
            ARDC RLRIP YC AFT TGSS+ISRGKGILA C P        * P*    PP* GS+Y    + IE PTSS    G R
Sbjct:  836 ARDCLRLRIP*YCFAFTKTGSSSISRGKGILA*CIPYNWAGIIA*CP*GANIPP*CGSEYIYGVNTIE*PTSSMLEFGSR 1075

HSP 8 
Score: 34.9748 bits (70), Expect = 7.5985e-22
Identity = 18/36 (50.00%), Postives = 19/36 (52.78%), Query Frame = -3
Query:  283 VSASVLPSFFVFRNGHLNLLLFSWHANAETHEDRAF 390
            V  + L  F V R    NLL  S HA  ETHED AF
Sbjct:  693 VGLASLSXFXVLRKRPHNLLPSS*HAGVETHEDMAF 800

HSP 9 
Score: 84.0031 bits (177), Expect = 1.046e-16
Identity = 41/81 (50.62%), Postives = 50/81 (61.73%), Query Frame = 2
Query:    2 DTSLHLPRWNLLGTQSHVDHINILIHIMGELCLLMDLSLWCILVVLECIPLECPCPLKWQRNLFM*MPSSTMEFSGDDSHV 244
            +T +  P WNLL TQ +  HI I IHIM E  LLM + L  +   +ECI LEC   LKW+RNL  *M S+ M F  +DSHV
Sbjct:  837 NTLIQTPXWNLLVTQLY*HHICIQIHIMAECWLLMGIKL*YLPNYMECIRLECLYLLKWKRNLSS*MQSNIMVF*DEDSHV 1079

HSP 10 
Score: 78.9628 bits (166), Expect = 3.44202e-15
Identity = 39/92 (42.39%), Postives = 53/92 (57.61%), Query Frame = -2
Query:    2 LLLVSFQAQPWHVTVVA*EFHGTAWHSHKQVPLPFQGARAF*RDALQYNENAPKAEVHK*A*LPHNMDQNIDVIHMRLSAQQVPAR*VE*GI 277
            LL +S +AQP HVTV   E+H  A H  +QVPLPFQ  +AF* DA          + HK     HN+D N  ++ ++LS QQVP   ++ G+
Sbjct:  804 LLSLSSEAQP*HVTVFVSEYHDIALHLRRQVPLPFQEVKAF*PDAFHIIGQVS*LDAHKEPTFRHNVDLNTYMVSIQLSDQQVPCWSLDQGV 1079

CC454_contig27514_v29.18408e-4869.89%
CC454_contig27514_v2
HSP 1 
Score: 153.193 bits (328), Expect = 9.18408e-48
Identity = 65/93 (69.89%), Postives = 74/93 (79.57%), Query Frame = 1
Query:    7 LTPPTALELVGHSIACGSHQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            LT P  LELVGHSIAC S+ Y D YYGG++  YG QP  +   +G+  ARMPLPLEM +EPVYVNAKQY GILRRRQ+RAKAELEKKLIKV+K
Sbjct:  512 LTQPPQLELVGHSIACASNPYQDQYYGGMIAAYGHQPYGYPPFLGMPHARMPLPLEMXQEPVYVNAKQYQGILRRRQARAKAELEKKLIKVRK 790

HSP 2 
Score: 54.2195 bits (112), Expect = 9.18408e-48
Identity = 20/23 (86.96%), Postives = 21/23 (91.30%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRH HAMRR RG+GGRF
Sbjct:  788 KPYLHESRHQHAMRRERGTGGRF 856

HSP 3 
Score: 97.2911 bits (206), Expect = 2.77068e-27
Identity = 46/91 (50.55%), Postives = 56/91 (61.54%), Query Frame = -3
Query:    7 NFY*FLFKLSLGT*LSSPENSMVLLGIHINRFLCHFKGQGHSSGMHSNTTRMHQRLRSISRHNSPIIWIKILM*STCD*VPNKFQRGRWSE 279
            NFY  LFKL     LS P+N++VL  IHINR LCH +GQ H    HS   R+  RL  IS ++SPII I I +*  C+*V N F+ GR  E
Sbjct:  512 NFYQLLFKLGFSXCLSPPQNTLVLFSIHINRLLCHLEGQRHXGMRHSXKWRITIRLMPISCYHSPIILILIWI*CACN*VTNXFKLGRLCE 784

HSP 4 
Score: 41.3897 bits (84), Expect = 2.77068e-27
Identity = 18/34 (52.94%), Postives = 23/34 (67.65%), Query Frame = -2
Query:  284 SISTTKLLCVQKRPPEPLALLMACKCRDS*R*GF 385
            S + +  +   KRPP PL+LL+AC C DS*R GF
Sbjct:  787 SFAASAAVFFAKRPPVPLSLLIAC*CLDS*RYGF 888

HSP 5 
Score: 64.7583 bits (135), Expect = 3.48549e-18
Identity = 27/32 (84.38%), Postives = 27/32 (84.38%), Query Frame = -1
Query:  150 ARDCRRLRIPWYCLAFT*TGSSAISRGKGILA 245
            AR C RL IPWYCLAFT*TGS  ISRGKGILA
Sbjct:  655 ARACLRLXIPWYCLAFT*TGSCXISRGKGILA 750

HSP 6 
Score: 43.2225 bits (88), Expect = 3.48549e-18
Identity = 24/38 (63.16%), Postives = 25/38 (65.79%), Query Frame = -1
Query:    3 G*GP*VGITPP*YGSKY*CDPHAIECPTSSSAVGGVRY 116
            G* P*  I PP*Y S Y  D HAIE PTSSS  G VR+
Sbjct:  508 G*CP*AAIIPP*Y*S*YGFDAHAIE*PTSSSWGGCVRH 621

HSP 7 
Score: 81.712 bits (172), Expect = 5.11925e-16
Identity = 44/94 (46.81%), Postives = 55/94 (58.51%), Query Frame = 3
Query:    3 IPHSTYRAGTCWALNRMWITSIF*SILWGSYAYLWTSAFGAFSLYWSASR*NALAP*NGRGTCLCECQAVPWNSQATTVTCQG*A*KETNKS*E 284
            +PH+T  A T W+LN M I SI  SILWG+ + LW SA    S+  +AS   A AP +    CLCEC  VP   +A T T    A*KE +KS*+
Sbjct:  508 MPHTTSPA*TXWSLNCMRIKSISGSILWGNDSSLWASALWLSSISXNASCQXAFAPRDXTXACLCEC*TVPRYXEAETGTX*SRA*KEVDKS*K 789

HSP 8 
Score: 73.4643 bits (154), Expect = 1.55606e-13
Identity = 41/93 (44.09%), Postives = 55/93 (59.14%), Query Frame = -2
Query:    2 *LLLVSFQAQPWHVTVVA*EFHGTAWHSHKQVPLPFQGARAF*RDALQYNENAPKAEVHK*A*LPHNMDQNIDVIHMRLSAQQVPAR*VE*GI 280
            *LL  SFQA+   V V A  + GT  HSHKQ  +  +GA+A   +A    E+  KA+ HK    PHN+D ++D++ M+LS Q V A  V *GI
Sbjct:  507 *LLSTSFQARL*XVPVSASXYLGTV*HSHKQAXVXSRGAKAXWHEAFXEMEDNHKADAHKLLSFPHNIDPDMDLMRMQLSDQXVQAGEVV*GI 785

HSP 9 
Score: 71.1732 bits (149), Expect = 7.61552e-13
Identity = 37/80 (46.25%), Postives = 46/80 (57.50%), Query Frame = 2
Query:    2 DTSLHLPRWNLLGTQSHVDHINILIHIMGELCLLMDLSLWCILVVLECIPLECPCPLKWQRNLFM*MPSSTMEFSGDDSH 241
            + S +LP  N L TQ H   I+I I+IMGE   LM +SL  IL   EC+   C CP +   +LFM*M +ST  F G D H
Sbjct:  507 NASHNLPSLNXLVTQLHAHQIHIRINIMGE**QLMGISLMVILHFXECLMPXCLCPSRXHXSLFM*MLNSTKVF*GGDRH 746

CC454_contig17969_v23.45087e-3265.57%
CC454_contig17969_v2
HSP 1 
Score: 98.2075 bits (208), Expect = 3.45087e-32
Identity = 40/61 (65.57%), Postives = 48/61 (78.69%), Query Frame = 1
Query:  103 YGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            YG QP+VH + +G+  A +PLP +  EEPV+VNAKQYHGILRRRQSRAKAE E K IK +K
Sbjct:  753 YGGQPMVHLQLMGIQQAGVPLPSDAVEEPVFVNAKQYHGILRRRQSRAKAESEHKAIKSRK 935

HSP 2 
Score: 56.9688 bits (118), Expect = 3.45087e-32
Identity = 21/23 (91.30%), Postives = 22/23 (95.65%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRHLHA+RRARG GGRF
Sbjct:  687 KPYLHESRHLHALRRARGCGGRF 755

HSP 3 
Score: 55.1359 bits (114), Expect = 9.50846e-16
Identity = 28/48 (58.33%), Postives = 29/48 (60.42%), Query Frame = -1
Query:  102 ARDCRRLRIPWYCLAFT*TGSSAISRGKGILAGCTPIQRECTKG*GP* 245
            ARDCRR R+P YC AFT TGSS  S GKG  A   PI    T G  P*
Sbjct:  793 ARDCRRRRMP*YCFAFTNTGSSTASDGKGTPACWIPIN*RWTIGCPP* 936

HSP 4 
Score: 44.5971 bits (91), Expect = 9.50846e-16
Identity = 17/25 (68.00%), Postives = 20/25 (80.00%), Query Frame = -2
Query:  284 VQKRPPEPLALLMACKCRDS*R*GF 358
            ++ RPP PLALL ACKCRDS + GF
Sbjct:  682 LRNRPPHPLALLSACKCRDSCKYGF 756

CC454_contig11890_v21.41217e-2672.73%
CC454_contig11890_v2
HSP 1 
Score: 63.3837 bits (132), Expect = 1.41217e-26
Identity = 24/33 (72.73%), Postives = 28/33 (84.85%), Query Frame = 1
Query:  187 PVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            P+YVN KQYHGILRRRQSRAK E + KL+K +K
Sbjct:  655 PIYVNPKQYHGILRRRQSRAKLEAQNKLVKARK 753

HSP 2 
Score: 51.0121 bits (105), Expect = 1.41217e-26
Identity = 18/23 (78.26%), Postives = 20/23 (86.96%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRH HA+ R RG+GGRF
Sbjct:  589 KPYLHESRHRHALNRTRGTGGRF 657

HSP 3 
Score: 31.3091 bits (62), Expect = 1.41217e-26
Identity = 10/28 (35.71%), Postives = 20/28 (71.43%), Query Frame = 1
Query:   40 HSIACGSHQYFDPYYGGVMPTYGPQPLV 123
            +S+A   + Y +P +GG++ +YGPQ ++
Sbjct:  808 YSMARVPYPYAEPCFGGLLTSYGPQAIM 891

HSP 4 
Score: 25.3524 bits (49), Expect = 1.41217e-26
Identity = 8/16 (50.00%), Postives = 13/16 (81.25%), Query Frame = 1
Query:  136 IGVHPARMPLPLEMAE 183
            +G+ PAR+PLPL+  +
Sbjct:  760 MGMAPARVPLPLDFTD 807

CC454_contig19322_v23.74634e-2165.71%
CC454_contig19322_v2
HSP 1 
Score: 59.2598 bits (123), Expect = 3.74634e-21
Identity = 23/35 (65.71%), Postives = 28/35 (80.00%), Query Frame = 1
Query:  181 EEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            +EP+YVN KQYH IL+RRQ RAK E + KLIK +K
Sbjct:   72 DEPIYVNKKQYHAILKRRQFRAKLEAQNKLIKSRK 176

HSP 2 
Score: 57.8852 bits (120), Expect = 3.74634e-21
Identity = 21/23 (91.30%), Postives = 23/23 (100.00%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRHLHA++RARGSGGRF
Sbjct:  174 KPYLHESRHLHALKRARGSGGRF 242

Blast Hits to Contigs V2 CCall

Analysis Date: 11-02-2009 (Blast: AB454_contigs_v2_vs_CCall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
CCall_contig7005_v25.07877e-4863.83%
CCall_contig7005_v2
HSP 1 
Score: 149.985 bits (321), Expect = 5.07877e-48
Identity = 60/94 (63.83%), Postives = 75/94 (79.79%), Query Frame = 1
Query:    4 YLTPPTALELVGHSIACGSHQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            +L P + +ELVGHSI    + Y DP+YGG++  YG Q ++ ++  G+H ARMPLPLEM EEPV+VNAKQYHGILRRRQSRAKAEL+KK IKV+K
Sbjct:  490 HLDPNSXMELVGHSIVLTPYMYSDPHYGGMLAPYGHQAMIPAQLYGMHQARMPLPLEMEEEPVFVNAKQYHGILRRRQSRAKAELQKKAIKVRK 771

HSP 2 
Score: 58.3434 bits (121), Expect = 5.07877e-48
Identity = 22/23 (95.65%), Postives = 22/23 (95.65%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRHLHAMRRARG GGRF
Sbjct:  769 KPYLHESRHLHAMRRARGCGGRF 837

HSP 3 
Score: 87.2105 bits (184), Expect = 2.87686e-27
Identity = 46/92 (50.00%), Postives = 57/92 (61.96%), Query Frame = -3
Query:    4 NFY*FLFKLSLGT*LSSPENSMVLLGIHINRFLCHFKGQGHSSGMHSNTTRMHQRLRSISRHNSPIIWIKILM*STCD*VPNKFQRGRWSEV 279
            NFY FL KLSL T*LSS +N+M+LL I+ +RFL HFK   HSS MHS     +  L  I   +S I+WI I +    +*V NKF  G W +V
Sbjct:  490 NFYRFLLKLSLST*LSSSQNTMILLCIYEDRFLFHFKR*RHSSLMHSI*LGRYHSLMPIRSQHSAIMWI*IHIWCQYN*VTNKFHXGVWIKV 765

HSP 4 
Score: 51.4703 bits (106), Expect = 2.87686e-27
Identity = 20/32 (62.50%), Postives = 26/32 (81.25%), Query Frame = -2
Query:  284 STTKLLCVQKRPPEPLALLMACKCRDS*R*GF 379
            S +    ++KRPP+PLALL+AC+CRDS*R GF
Sbjct:  768 SLSXFXVLRKRPPQPLALLIACRCRDS*RYGF 863

HSP 5 
Score: 101.873 bits (216), Expect = 5.2923e-24
Identity = 43/91 (47.25%), Postives = 59/91 (64.84%), Query Frame = 3
Query:    6 PHSTYRAGTCWALNRMWITSIF*SILWGSYAYLWTSAFGAFSLYWSASR*NALAP*NGRGTCLCECQAVPWNSQATTVTCQG*A*KETNKS 278
            P S  + GTCW+LN +    +F S LW +   LW S++    + W+AS *NA   *NGRGTCL +C+A+ W S+  TVTC G*A +E++KS
Sbjct:  492 P*SKLQHGTCWSLNCIDTIYVFRSTLWRNVGSLWASSYDTCPIIWNASG*NAFTS*NGRGTCLRKCKAISWYSETKTVTC*G*ASEESDKS 764

HSP 6 
Score: 25.8106 bits (50), Expect = 5.2923e-24
Identity = 11/17 (64.71%), Postives = 14/17 (82.35%), Query Frame = 2
Query:  287 ALSS*VSAFACHEKSKR 337
            A+SS*VS  AC+E+ KR
Sbjct:  771 AISS*VSTPACYEEGKR 821

HSP 7 
Score: 85.3777 bits (180), Expect = 2.45449e-20
Identity = 46/80 (57.50%), Postives = 49/80 (61.25%), Query Frame = -1
Query:    6 ARDCRRLRIPWYCLAFT*TGSSAISRGKGILAGCTPIQRECTKG*GP*VGITPP*YGSKY*CDPHAIECPTSSSAVGGVR 245
            ARDC RLRIP YC AFT TGSS+ISRGKGILA C P        * P*    PP* GS+Y    + IE PTSS    G R
Sbjct:  492 ARDCLRLRIP*YCFAFTKTGSSSISRGKGILA*CIPYNWAGIIA*CP*GANIPP*CGSEYIYGVNTIE*PTSSMLEFGSR 731

HSP 8 
Score: 29.9345 bits (59), Expect = 2.45449e-20
Identity = 13/19 (68.42%), Postives = 13/19 (68.42%), Query Frame = -3
Query:  283 NLLLFSWHANAETHEDRAF 339
            NLL  S HA  ETHED AF
Sbjct:  767 NLLPSS*HAGVETHEDMAF 823

HSP 9 
Score: 84.0031 bits (177), Expect = 1.08635e-16
Identity = 41/81 (50.62%), Postives = 50/81 (61.73%), Query Frame = 2
Query:    2 DTSLHLPRWNLLGTQSHVDHINILIHIMGELCLLMDLSLWCILVVLECIPLECPCPLKWQRNLFM*MPSSTMEFSGDDSHV 244
            +T +  P WNLL TQ +  HI I IHIM E  LLM + L  +   +ECI LEC   LKW+RNL  *M S+ M F  +DSHV
Sbjct:  488 NTLIQTPXWNLLVTQLY*HHICIQIHIMAECWLLMGIKL*YLPNYMECIRLECLYLLKWKRNLSS*MQSNIMVF*DEDSHV 730

HSP 10 
Score: 78.9628 bits (166), Expect = 3.57477e-15
Identity = 39/92 (42.39%), Postives = 53/92 (57.61%), Query Frame = -2
Query:    2 LLLVSFQAQPWHVTVVA*EFHGTAWHSHKQVPLPFQGARAF*RDALQYNENAPKAEVHK*A*LPHNMDQNIDVIHMRLSAQQVPAR*VE*GI 277
            LL +S +AQP HVTV   E+H  A H  +QVPLPFQ  +AF* DA          + HK     HN+D N  ++ ++LS QQVP   ++ G+
Sbjct:  488 LLSLSSEAQP*HVTVFVSEYHDIALHLRRQVPLPFQEVKAF*PDAFHIIGQVS*LDAHKEPTFRHNVDLNTYMVSIQLSDQQVPCWSLDQGV 763

CCall_contig27083_v29.5383e-4869.89%
CCall_contig27083_v2
HSP 1 
Score: 153.193 bits (328), Expect = 9.5383e-48
Identity = 65/93 (69.89%), Postives = 74/93 (79.57%), Query Frame = 1
Query:    7 LTPPTALELVGHSIACGSHQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            LT P  LELVGHSIAC S+ Y D YYGG++  YG QP  +   +G+  ARMPLPLEM +EPVYVNAKQY GILRRRQ+RAKAELEKKLIKV+K
Sbjct:  512 LTQPPQLELVGHSIACASNPYQDQYYGGMIAAYGHQPYGYPPFLGMPHARMPLPLEMXQEPVYVNAKQYQGILRRRQARAKAELEKKLIKVRK 790

HSP 2 
Score: 54.2195 bits (112), Expect = 9.5383e-48
Identity = 20/23 (86.96%), Postives = 21/23 (91.30%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRH HAMRR RG+GGRF
Sbjct:  788 KPYLHESRHQHAMRRERGTGGRF 856

HSP 3 
Score: 97.2911 bits (206), Expect = 2.87754e-27
Identity = 46/91 (50.55%), Postives = 56/91 (61.54%), Query Frame = -3
Query:    7 NFY*FLFKLSLGT*LSSPENSMVLLGIHINRFLCHFKGQGHSSGMHSNTTRMHQRLRSISRHNSPIIWIKILM*STCD*VPNKFQRGRWSE 279
            NFY  LFKL     LS P+N++VL  IHINR LCH +GQ H    HS   R+  RL  IS ++SPII I I +*  C+*V N F+ GR  E
Sbjct:  512 NFYQLLFKLGFSXCLSPPQNTLVLFSIHINRLLCHLEGQRHXGMRHSXKWRITIRLMPISCYHSPIILILIWI*CACN*VTNXFKLGRLCE 784

HSP 4 
Score: 41.3897 bits (84), Expect = 2.87754e-27
Identity = 18/34 (52.94%), Postives = 23/34 (67.65%), Query Frame = -2
Query:  284 SISTTKLLCVQKRPPEPLALLMACKCRDS*R*GF 385
            S + +  +   KRPP PL+LL+AC C DS*R GF
Sbjct:  787 SFAASAAVFFAKRPPVPLSLLIAC*CLDS*RYGF 888

HSP 5 
Score: 64.7583 bits (135), Expect = 3.61991e-18
Identity = 27/32 (84.38%), Postives = 27/32 (84.38%), Query Frame = -1
Query:  150 ARDCRRLRIPWYCLAFT*TGSSAISRGKGILA 245
            AR C RL IPWYCLAFT*TGS  ISRGKGILA
Sbjct:  655 ARACLRLXIPWYCLAFT*TGSCXISRGKGILA 750

HSP 6 
Score: 43.2225 bits (88), Expect = 3.61991e-18
Identity = 24/38 (63.16%), Postives = 25/38 (65.79%), Query Frame = -1
Query:    3 G*GP*VGITPP*YGSKY*CDPHAIECPTSSSAVGGVRY 116
            G* P*  I PP*Y S Y  D HAIE PTSSS  G VR+
Sbjct:  508 G*CP*AAIIPP*Y*S*YGFDAHAIE*PTSSSWGGCVRH 621

HSP 7 
Score: 81.712 bits (172), Expect = 5.31668e-16
Identity = 44/94 (46.81%), Postives = 55/94 (58.51%), Query Frame = 3
Query:    3 IPHSTYRAGTCWALNRMWITSIF*SILWGSYAYLWTSAFGAFSLYWSASR*NALAP*NGRGTCLCECQAVPWNSQATTVTCQG*A*KETNKS*E 284
            +PH+T  A T W+LN M I SI  SILWG+ + LW SA    S+  +AS   A AP +    CLCEC  VP   +A T T    A*KE +KS*+
Sbjct:  508 MPHTTSPA*TXWSLNCMRIKSISGSILWGNDSSLWASALWLSSISXNASCQXAFAPRDXTXACLCEC*TVPRYXEAETGTX*SRA*KEVDKS*K 789

HSP 8 
Score: 73.4643 bits (154), Expect = 1.61608e-13
Identity = 41/93 (44.09%), Postives = 55/93 (59.14%), Query Frame = -2
Query:    2 *LLLVSFQAQPWHVTVVA*EFHGTAWHSHKQVPLPFQGARAF*RDALQYNENAPKAEVHK*A*LPHNMDQNIDVIHMRLSAQQVPAR*VE*GI 280
            *LL  SFQA+   V V A  + GT  HSHKQ  +  +GA+A   +A    E+  KA+ HK    PHN+D ++D++ M+LS Q V A  V *GI
Sbjct:  507 *LLSTSFQARL*XVPVSASXYLGTV*HSHKQAXVXSRGAKAXWHEAFXEMEDNHKADAHKLLSFPHNIDPDMDLMRMQLSDQXVQAGEVV*GI 785

HSP 9 
Score: 71.1732 bits (149), Expect = 7.90924e-13
Identity = 37/80 (46.25%), Postives = 46/80 (57.50%), Query Frame = 2
Query:    2 DTSLHLPRWNLLGTQSHVDHINILIHIMGELCLLMDLSLWCILVVLECIPLECPCPLKWQRNLFM*MPSSTMEFSGDDSH 241
            + S +LP  N L TQ H   I+I I+IMGE   LM +SL  IL   EC+   C CP +   +LFM*M +ST  F G D H
Sbjct:  507 NASHNLPSLNXLVTQLHAHQIHIRINIMGE**QLMGISLMVILHFXECLMPXCLCPSRXHXSLFM*MLNSTKVF*GGDRH 746

CCall_contig17830_v23.58396e-3265.57%
CCall_contig17830_v2
HSP 1 
Score: 98.2075 bits (208), Expect = 3.58396e-32
Identity = 40/61 (65.57%), Postives = 48/61 (78.69%), Query Frame = 1
Query:  103 YGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            YG QP+VH + +G+  A +PLP +  EEPV+VNAKQYHGILRRRQSRAKAE E K IK +K
Sbjct:  753 YGGQPMVHLQLMGIQQAGVPLPSDAVEEPVFVNAKQYHGILRRRQSRAKAESEHKAIKSRK 935

HSP 2 
Score: 56.9688 bits (118), Expect = 3.58396e-32
Identity = 21/23 (91.30%), Postives = 22/23 (95.65%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRHLHA+RRARG GGRF
Sbjct:  687 KPYLHESRHLHALRRARGCGGRF 755

HSP 3 
Score: 55.1359 bits (114), Expect = 9.87519e-16
Identity = 28/48 (58.33%), Postives = 29/48 (60.42%), Query Frame = -1
Query:  102 ARDCRRLRIPWYCLAFT*TGSSAISRGKGILAGCTPIQRECTKG*GP* 245
            ARDCRR R+P YC AFT TGSS  S GKG  A   PI    T G  P*
Sbjct:  793 ARDCRRRRMP*YCFAFTNTGSSTASDGKGTPACWIPIN*RWTIGCPP* 936

HSP 4 
Score: 44.5971 bits (91), Expect = 9.87519e-16
Identity = 17/25 (68.00%), Postives = 20/25 (80.00%), Query Frame = -2
Query:  284 VQKRPPEPLALLMACKCRDS*R*GF 358
            ++ RPP PLALL ACKCRDS + GF
Sbjct:  682 LRNRPPHPLALLSACKCRDSCKYGF 756

CCall_contig24295_v21.48059e-2672.73%
CCall_contig24295_v2
HSP 1 
Score: 63.3837 bits (132), Expect = 1.48059e-26
Identity = 24/33 (72.73%), Postives = 28/33 (84.85%), Query Frame = 1
Query:  187 PVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            P+YVN KQYHGILRRRQSRAK E + KL+K +K
Sbjct:  688 PIYVNPKQYHGILRRRQSRAKLEAQNKLVKARK 786

HSP 2 
Score: 51.0121 bits (105), Expect = 1.48059e-26
Identity = 18/23 (78.26%), Postives = 20/23 (86.96%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRH HA+ R RG+GGRF
Sbjct:  784 KPYLHESRHRHALNRTRGTGGRF 852

HSP 3 
Score: 31.3091 bits (62), Expect = 1.48059e-26
Identity = 10/28 (35.71%), Postives = 20/28 (71.43%), Query Frame = 1
Query:   40 HSIACGSHQYFDPYYGGVMPTYGPQPLV 123
            +S+A   + Y +P +GG++ +YGPQ ++
Sbjct:  550 YSMARVPYPYAEPCFGGLLTSYGPQAIM 633

HSP 4 
Score: 25.3524 bits (49), Expect = 1.48059e-26
Identity = 8/16 (50.00%), Postives = 13/16 (81.25%), Query Frame = 1
Query:  136 IGVHPARMPLPLEMAE 183
            +G+ PAR+PLPL+  +
Sbjct:  634 MGMAPARVPLPLDFTD 681

CCall_contig36234_v23.89083e-2165.71%
CCall_contig36234_v2
HSP 1 
Score: 59.2598 bits (123), Expect = 3.89083e-21
Identity = 23/35 (65.71%), Postives = 28/35 (80.00%), Query Frame = 1
Query:  181 EEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            +EP+YVN KQYH IL+RRQ RAK E + KLIK +K
Sbjct:   72 DEPIYVNKKQYHAILKRRQFRAKLEAQNKLIKSRK 176

HSP 2 
Score: 57.8852 bits (120), Expect = 3.89083e-21
Identity = 21/23 (91.30%), Postives = 23/23 (100.00%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRHLHA++RARGSGGRF
Sbjct:  174 KPYLHESRHLHALKRARGSGGRF 242

Blast Hits to C. Parasitica Protein

Analysis Date: 11-02-2009 (Blast: AB454_contigs_v2_vs_CparasiticaFilteredProteinModelsAAseqs)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
estExt_Genewise1Plus.C_1401652.86107e-1284.00%
Crypa1|95989|estExt_Genewise1Plus.C_140165
HSP 1 
Score: 46.9802 bits (110), Expect = 2.86107e-12
Identity = 21/25 (84.00%), Postives = 21/25 (84.00%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF*T 359
            KPYLHESRH HAMRR RG GGRF T
Sbjct:  215 KPYLHESRHNHAMRRPRGPGGRFLT 239

HSP 2 
Score: 39.2762 bits (90), Expect = 2.86107e-12
Identity = 22/55 (40.00%), Postives = 30/55 (54.55%), Query Frame = 1
Query:  142 VHPARMPLPLEMA-----EEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKKSP 291
            V P + P   EM      E P+YVNAKQ+H IL+RR +R + E   +L    + P
Sbjct:  162 VPPVQQPQSPEMPQGGQEESPLYVNAKQFHRILKRRVARQRLEEALRLTSKGRKP 216

Blast Hits to MedicagoProt

Analysis Date: 11-02-2009 (Blast: AB454_contigs_v2_vs_MedicagoProt_20080227)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
IMGA|AC137554_20.4 CCAAT-binding tran2.53989e-2243.62%
cription factor, subunit B chr02_pseudomolecule_IMGAG_V2 23056002-23052136 E EGN_Mt071002 20080227
HSP 1 
Score: 72.0182 bits (175), Expect = 2.53989e-22
Identity = 41/94 (43.62%), Postives = 55/94 (58.51%), Query Frame = 1
Query:   43 SIACGSHQYFDPYYGGVMP-TYGPQ------------PLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            S+A  +  Y DP Y G++  +YG Q             L+  + +     R+PLP +MAEEP+YVN+KQYH I+RRRQ RAK E   KLIK +K
Sbjct:  126 SLAHVALHYADPGYNGLLSASYGQQYKAYSIMSSNSDQLLQGQLMETASVRIPLPSDMAEEPIYVNSKQYHAIMRRRQCRAKLEAHNKLIKDRK 219

HSP 2 
Score: 48.9062 bits (115), Expect = 2.53989e-22
Identity = 20/29 (68.97%), Postives = 25/29 (86.21%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF*TQRSL 371
            KPYLHESRH+HA++RARG+GGRF   + L
Sbjct:  219 KPYLHESRHVHALKRARGAGGRFLNAKKL 247

IMGA|AC202362_15.3 CCAAT-binding tran4.30091e-2249.40%
cription factor, subunit B chr01_pseudomolecule_IMGAG_V2 215445-217850 F EGN_Mt071002 20080227
HSP 1 
Score: 71.633 bits (174), Expect = 4.30091e-22
Identity = 41/83 (49.40%), Postives = 49/83 (59.04%), Query Frame = 1
Query:   43 SIACGSHQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAEE--PVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            S+ C  + Y D +YG +  TYGPQ             R+ LPL M  +  P YVNAKQYHGI+RRR SRAKA L+ KLIK  K
Sbjct:  126 SMICAKYPYMDQFYG-LFSTYGPQI----------SGRIMLPLSMTSDDGPTYVNAKQYHGIIRRRHSRAKAVLQNKLIKRNK 197

HSP 2 
Score: 48.521 bits (114), Expect = 4.30091e-22
Identity = 20/23 (86.96%), Postives = 21/23 (91.30%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPY+HESRHLHAMRR RG GGRF
Sbjct:  197 KPYMHESRHLHAMRRPRGCGGRF 219

Blast Hits to Contig V2 Oall

Analysis Date: 11-02-2009 (Blast: AB454_contigs_v2_vs_Oall_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
Oall_contig18316_v23.99253e-4870.97%
Oall_contig18316_v2
HSP 1 
Score: 154.109 bits (330), Expect = 3.99253e-48
Identity = 66/93 (70.97%), Postives = 75/93 (80.65%), Query Frame = 1
Query:    7 LTPPTALELVGHSIACGSHQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            LT P  LELVGHSIAC S+ Y D YYGG++  YG QP  +   +G+  ARMPLPLEMA+EPVYVNAKQY GILRRRQ+RAKAELEKKLIKV+K
Sbjct:  738 LTQPPQLELVGHSIACASNPYQD*YYGGMIAAYGHQPYGYPPFLGMPHARMPLPLEMAQEPVYVNAKQYQGILRRRQARAKAELEKKLIKVRK 1016

HSP 2 
Score: 54.2195 bits (112), Expect = 3.99253e-48
Identity = 20/23 (86.96%), Postives = 21/23 (91.30%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRH HAMRR RG+GGRF
Sbjct:  672 KPYLHESRHQHAMRRERGTGGRF 740

HSP 3 
Score: 105.997 bits (225), Expect = 7.99838e-30
Identity = 49/91 (53.85%), Postives = 59/91 (64.84%), Query Frame = -3
Query:    7 NFY*FLFKLSLGT*LSSPENSMVLLGIHINRFLCHFKGQGHSSGMHSNTTRMHQRLRSISRHNSPIIWIKILM*STCD*VPNKFQRGRWSE 279
            NFY  LFKL   T LS P+N++VL  IHINR LCH +GQ HS   HS   R+  RL  IS ++SPII I I +*  C+*V NKF+ GR  E
Sbjct:  744 NFYQLLFKLGFSTCLSPPQNTLVLFSIHINRLLCHLEGQRHSGMRHSKKRRITIRLMPISCYHSPIILILIWI*CACN*VTNKFKLGRLCE 1016

HSP 4 
Score: 40.9315 bits (83), Expect = 7.99838e-30
Identity = 17/23 (73.91%), Postives = 19/23 (82.61%), Query Frame = -2
Query:  284 KRPPEPLALLMACKCRDS*R*GF 352
            KRPP PL+LL+AC C DS*R GF
Sbjct:  673 KRPPVPLSLLIAC*CLDS*RYGF 741

HSP 5 
Score: 97.2911 bits (206), Expect = 8.53652e-21
Identity = 48/92 (52.17%), Postives = 57/92 (61.96%), Query Frame = 3
Query:    9 HSTYRAGTCWALNRMWITSIF*SILWGSYAYLWTSAFGAFSLYWSASR*NALAP*NGRGTCLCECQAVPWNSQATTVTCQG*A*KETNKS*E 284
            H+T  A TCW+LN M I SI   ILWG+ + LW SA    S  W+AS  NA AP +G   CLCEC  VP  S+A T TC   A*KE +KS*+
Sbjct:  739 HTTSPA*TCWSLNCMRIKSISGLILWGNDSSLWASALWLSSFSWNASCQNAFAPRDGTRACLCEC*TVPRYSEAETGTC*SRA*KEVDKS*K 1014

HSP 6 
Score: 69.7986 bits (146), Expect = 9.19567e-20
Identity = 29/32 (90.62%), Postives = 29/32 (90.62%), Query Frame = -1
Query:  150 ARDCRRLRIPWYCLAFT*TGSSAISRGKGILA 245
            AR C RLRIPWYCLAFT*TGS AISRGKGILA
Sbjct:  778 ARACLRLRIPWYCLAFT*TGSCAISRGKGILA 873

HSP 7 
Score: 43.2225 bits (88), Expect = 9.19567e-20
Identity = 24/38 (63.16%), Postives = 25/38 (65.79%), Query Frame = -1
Query:    3 G*GP*VGITPP*YGSKY*CDPHAIECPTSSSAVGGVRY 116
            G* P*  I PP*Y S Y  D HAIE PTSSS  G VR+
Sbjct:  907 G*CP*AAIIPP*Y*S*YGFDAHAIE*PTSSSWGGCVRH 1020

HSP 8 
Score: 89.0434 bits (188), Expect = 2.59479e-18
Identity = 42/81 (51.85%), Postives = 53/81 (65.43%), Query Frame = 2
Query:    2 DTSLHLPRWNLLGTQSHVDHINILIHIMGELCLLMDLSLWCILVVLECIPLECPCPLKWQRNLFM*MPSSTMEFSGDDSHV 244
            + S +LP  NLL TQ H   I+I I+IMGE   LM +SL  IL+ LEC+  EC CP +W ++LFM*M +ST  F G D HV
Sbjct:  779 NVSHNLPSLNLLVTQLHAHQIHIRINIMGE**QLMGISLMVILLFLECLMPECLCPSRWHKSLFM*MLNSTKVF*GGDRHV 1021

HSP 9 
Score: 87.2105 bits (184), Expect = 9.24357e-18
Identity = 42/86 (48.84%), Postives = 57/86 (66.28%), Query Frame = -2
Query:   23 *LLLVSFQAQPWHVTVVA*EFHGTAWHSHKQVPLPFQGARAF*RDALQYNENAPKAEVHK*A*LPHNMDQNIDVIHMRLSAQQVPA 280
            *LL  SFQA+  HV V A E+ GT  HSHKQ  +P +GA+AF  +A Q  E+  KA+ HK    PHN++ ++D++ M+LS QQV A
Sbjct:  743 *LLSTSFQARL*HVPVSASEYLGTV*HSHKQALVPSRGAKAFWHEAFQEKEDNHKADAHKLLSFPHNINPDMDLMRMQLSDQQVQA 1000

Oall_contig23382_v21.07451e-4166.67%
Oall_contig23382_v2
HSP 1 
Score: 128.449 bits (274), Expect = 1.07451e-41
Identity = 50/75 (66.67%), Postives = 63/75 (84.00%), Query Frame = 1
Query:   61 HQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            + Y +P+YGG++  YG Q ++ ++  G+H ARMPLPLEM EEPV+VNAKQYHGILRRRQSRAKAEL+KK IKV+K
Sbjct:  600 YMYSEPHYGGMLAPYGHQAMIPAQLYGMHQARMPLPLEMEEEPVFVNAKQYHGILRRRQSRAKAELQKKAIKVRK 824

HSP 2 
Score: 58.3434 bits (121), Expect = 1.07451e-41
Identity = 22/23 (95.65%), Postives = 22/23 (95.65%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRHLHAMRRARG GGRF
Sbjct:  534 KPYLHESRHLHAMRRARGCGGRF 602

HSP 3 
Score: 76.6717 bits (161), Expect = 3.07017e-24
Identity = 38/60 (63.33%), Postives = 40/60 (66.67%), Query Frame = -1
Query:   66 ARDCRRLRIPWYCLAFT*TGSSAISRGKGILAGCTPIQRECTKG*GP*VGITPP*YGSKY 245
            ARDC RLRIP YC AFT TGSS+ISRGKGILA C P        * P*    PP* GS+Y
Sbjct:  640 ARDCLRLRIP*YCFAFTKTGSSSISRGKGILA*CIPYNWAGIIA*CP*GANIPP*CGSEY 819

HSP 4 
Score: 51.4703 bits (106), Expect = 3.07017e-24
Identity = 20/32 (62.50%), Postives = 26/32 (81.25%), Query Frame = -2
Query:  284 STTKLLCVQKRPPEPLALLMACKCRDS*R*GF 379
            S +    ++KRPP+PLALL+AC+CRDS*R GF
Sbjct:  508 SLSGFFVLRKRPPQPLALLIACRCRDS*RYGF 603

HSP 5 
Score: 84.0031 bits (177), Expect = 3.93073e-18
Identity = 34/71 (47.89%), Postives = 48/71 (67.61%), Query Frame = 3
Query:   66 IF*SILWGSYAYLWTSAFGAFSLYWSASR*NALAP*NGRGTCLCECQAVPWNSQATTVTCQG*A*KETNKS 278
            +F + LW +   LW S++    + W+AS *NA   *NGRGTCL +C+A+ W S+  TVTC G*A +E++KS
Sbjct:  607 VFRATLWRNVGSLWASSYDTCPIIWNASG*NAFTS*NGRGTCLRKCKAISWYSETKTVTC*G*ASEESDKS 819

HSP 6 
Score: 23.5196 bits (45), Expect = 3.93073e-18
Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = 2
Query:  287 ALSS*VSAFACHEKSK 334
            A+SS*VS  AC+E+ K
Sbjct:  553 AISS*VSTPACYEEGK 600

HSP 7 
Score: 73.4643 bits (154), Expect = 1.07947e-16
Identity = 36/69 (52.17%), Postives = 45/69 (65.22%), Query Frame = -3
Query:   73 NFY*FLFKLSLGT*LSSPENSMVLLGIHINRFLCHFKGQGHSSGMHSNTTRMHQRLRSISRHNSPIIWI 279
            NFY FL KLSL T*LSS +N+M+LL I+ +RFL HFK   HSS MHS     +  L  I   +S I+W+
Sbjct:  606 NFYRFLLKLSLST*LSSSQNTMILLCIYEDRFLFHFKR*RHSSLMHSI*LGRYHSLMPIRSQHSAIMWL 812

HSP 8 
Score: 27.6434 bits (54), Expect = 1.07947e-16
Identity = 12/19 (63.16%), Postives = 12/19 (63.16%), Query Frame = -3
Query:  283 NLLLFSWHANAETHEDRAF 339
            N L  S HA  ETHED AF
Sbjct:  548 NXLPSS*HAGVETHEDMAF 604

HSP 9 
Score: 21.6867 bits (41), Expect = 1.07947e-16
Identity = 6/10 (60.00%), Postives = 9/10 (90.00%), Query Frame = -2
Query:  341 KLLCVQKRPP 370
            +LLC++K PP
Sbjct:  516 RLLCIKKAPP 545

Oall_contig23489_v23.68727e-3565.52%
Oall_contig23489_v2
HSP 1 
Score: 93.1672 bits (197), Expect = 3.68727e-35
Identity = 38/58 (65.52%), Postives = 46/58 (79.31%), Query Frame = 1
Query:  112 QPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            QP+VH + +G+  A +PLP +  EEPV+VNAKQYHGILRRRQSRAKAE E K IK +K
Sbjct:  554 QPMVHLQLMGIQQAGVPLPSDAVEEPVFVNAKQYHGILRRRQSRAKAESEHKAIKSRK 727

HSP 2 
Score: 56.9688 bits (118), Expect = 3.68727e-35
Identity = 21/23 (91.30%), Postives = 22/23 (95.65%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRHLHA+RRARG GGRF
Sbjct:  488 KPYLHESRHLHALRRARGCGGRF 556

HSP 3 
Score: 32.6837 bits (65), Expect = 3.68727e-35
Identity = 12/28 (42.86%), Postives = 17/28 (60.71%), Query Frame = 1
Query:   37 GHSIACGSHQYFDPYYGGVMPTYGPQPL 120
            G ++A G++ Y DPYY  +   Y  QPL
Sbjct:  751 GPAMAPGAYPYPDPYYRSIFAPYDAQPL 834

HSP 4 
Score: 54.2195 bits (112), Expect = 1.44965e-15
Identity = 26/44 (59.09%), Postives = 27/44 (61.36%), Query Frame = -1
Query:  114 ARDCRRLRIPWYCLAFT*TGSSAISRGKGILAGCTPIQRECTKG 245
            ARDCRR R+P YC AFT TGSS  S GKG  A   PI    T G
Sbjct:  594 ARDCRRRRMP*YCFAFTNTGSSTASDGKGTPACWIPIN*RWTIG 725

HSP 5 
Score: 44.5971 bits (91), Expect = 1.44965e-15
Identity = 17/25 (68.00%), Postives = 20/25 (80.00%), Query Frame = -2
Query:  284 VQKRPPEPLALLMACKCRDS*R*GF 358
            ++ RPP PLALL ACKCRDS + GF
Sbjct:  483 LRNRPPHPLALLSACKCRDSCKYGF 557

Oall_contig37603_v27.71456e-3172.73%
Oall_contig37603_v2
HSP 1 
Score: 63.3837 bits (132), Expect = 7.71456e-31
Identity = 24/33 (72.73%), Postives = 28/33 (84.85%), Query Frame = 1
Query:  187 PVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            P+YVN KQYHGILRRRQSRAK E + KL+K +K
Sbjct:  687 PIYVNPKQYHGILRRRQSRAKLEAQNKLVKARK 785

HSP 2 
Score: 53.7613 bits (111), Expect = 7.71456e-31
Identity = 18/48 (37.50%), Postives = 33/48 (68.75%), Query Frame = 1
Query:   40 HSIACGSHQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAE 183
            +S+A   + Y +P +GG++  YGPQ ++  + +G+ PAR+PLPL+  +
Sbjct:  792 YSMARVPYPYAEPCFGGLLTAYGPQAIIRPQMMGMAPARVPLPLDFTD 935

HSP 3 
Score: 51.0121 bits (105), Expect = 7.71456e-31
Identity = 18/23 (78.26%), Postives = 20/23 (86.96%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRH HA+ R RG+GGRF
Sbjct:  621 KPYLHESRHRHALNRTRGTGGRF 689

Oall_contig37664_v22.47309e-2768.57%
Oall_contig37664_v2
HSP 1 
Score: 60.6344 bits (126), Expect = 2.47309e-27
Identity = 24/35 (68.57%), Postives = 28/35 (80.00%), Query Frame = 1
Query:  181 EEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            +EP+YVN KQYH ILRRRQ RAK E + KLIK +K
Sbjct:  200 DEPIYVNKKQYHAILRRRQFRAKLEAQNKLIKSRK 304

HSP 2 
Score: 59.2598 bits (123), Expect = 2.47309e-27
Identity = 22/29 (75.86%), Postives = 26/29 (89.66%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF*TQRSL 371
            KPYLHESRHLHA++RARGSGGRF  ++ L
Sbjct:  116 KPYLHESRHLHALKRARGSGGRFLNKKKL 202

HSP 3 
Score: 36.3494 bits (73), Expect = 2.47309e-27
Identity = 14/28 (50.00%), Postives = 17/28 (60.71%), Query Frame = 1
Query:   43 SIACGSHQYFDPYYGGVMPTYGPQPLVH 126
            SIAC    Y DPYYG    T+G Q ++H
Sbjct:  365 SIACLQFPYSDPYYGLFAATFGHQAIMH 448

HSP 4 
Score: 41.8479 bits (85), Expect = 3.49171e-13
Identity = 17/37 (45.95%), Postives = 25/37 (67.57%), Query Frame = -2
Query:  272 ISTTKLLCVQKRPPEPLALLMACKCRDS*R*GFS*LL 382
            + ++    ++KRPP+PLAL  A +CRDS*R G   L+
Sbjct:  105 LDSSSFFLLRKRPPDPLALFNAWRCRDS*RYGLRLLM 215

HSP 5 
Score: 39.5569 bits (80), Expect = 3.49171e-13
Identity = 15/23 (65.22%), Postives = 17/23 (73.91%), Query Frame = -1
Query:  177 ARDCRRLRIPWYCLAFT*TGSSA 245
            AR+C RLRI WYC   T* GSS+
Sbjct:  240 ARNCLRLRIAWYCFLLT*MGSSS 308

HSP 6 
Score: 26.2688 bits (51), Expect = 3.49171e-13
Identity = 12/30 (40.00%), Postives = 15/30 (50.00%), Query Frame = -3
Query:   67 SSGMHSNTTRMHQRLRSISRHNSPIIWIKI 156
            SSG   +  RMH  L S       +IWI+I
Sbjct:  335 SSGHPYHLGRMHNSLMSKCSSKQTVIWIRI 424

Oall_contig3303_v28.54002e-1573.33%
Oall_contig3303_v2
HSP 1 
Score: 57.427 bits (119), Expect = 8.54002e-15
Identity = 22/30 (73.33%), Postives = 25/30 (83.33%), Query Frame = 1
Query:  187 PVYVNAKQYHGILRRRQSRAKAELEKKLIK 276
            P+YVN K YHGILRRRQSRAK E + KL+K
Sbjct:    6 PIYVNPKXYHGILRRRQSRAKLEAQNKLVK 95

HSP 2 
Score: 30.8509 bits (61), Expect = 8.54002e-15
Identity = 10/28 (35.71%), Postives = 19/28 (67.86%), Query Frame = 1
Query:   40 HSIACGSHQYFDPYYGGVMPTYGPQPLV 123
            +S+A   + Y +P +GG++  YGPQ ++
Sbjct:  150 YSMARVXYPYAEPCFGGLLTAYGPQAIM 233

HSP 3 
Score: 25.3524 bits (49), Expect = 8.54002e-15
Identity = 8/16 (50.00%), Postives = 13/16 (81.25%), Query Frame = 1
Query:  136 IGVHPARMPLPLEMAE 183
            +G+ PAR+PLPL+  +
Sbjct:  102 MGMAPARVPLPLDFTD 149

Blast Hits to Populus Trichocarpa Proteins

Analysis Date: 11-02-2009 (Blast: AB454_contigs_v2_vs_PopulusProt_JamboreeModels1_1)
Best 10 Hits Shown | Show Best 25 Hits
Note: Click a description for more details.
Match Name E value Identity
fgenesh4_pg.C_LG_IX0009873.57384e-3864.21%
jgi|Poptr1_1|767936|fgenesh4_pg.C_LG_IX000987
HSP 1 
Score: 124.02 bits (310), Expect = 3.57384e-38
Identity = 61/95 (64.21%), Postives = 74/95 (77.89%), Query Frame = 1
Query:    1 GYLTPPTALELVGHSIACGSHQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            G+L P + +ELVGHSI   SH Y DP YGG+  +YG Q +V  +  G+  ARMPLPLEM EEPVYVNAKQ+HGI+RRRQ+RAKAELEKK +KV+K
Sbjct:  110 GHLEPNSQMELVGHSIVLTSHPYTDPQYGGMFASYGAQAMV-PQLYGMPHARMPLPLEMEEEPVYVNAKQFHGIMRRRQARAKAELEKKAVKVRK 203

HSP 2 
Score: 48.1358 bits (113), Expect = 3.57384e-38
Identity = 21/29 (72.41%), Postives = 23/29 (79.31%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF*TQRSL 371
            KPYLHESRH HA+RRARG GGRF   + L
Sbjct:  203 KPYLHESRHQHALRRARGCGGRFLNTKKL 231

HSP 3 
Score: 23.0978 bits (48), Expect = 3.57384e-38
Identity = 20/87 (22.99%), Postives = 34/87 (39.08%), Query Frame = 2
Query:  350 FLNTKKLGSTDADTAPDKG---ATNPGGAVSTHPINSLHQPQTYPNANGNSCYPHHQGFQFSGYHLHSGDRTGRREYFAGQQDGKYL 601
            FLNTKKL ++  +   +KG     N      +  ++     +   + N +      +G Q S     +G     R Y +   DG +L
Sbjct:  225 FLNTKKLDNSATNPTSEKGINSVANISKQSYSFSVSECFPTEGSGDLNSSGDLEEGKGSQASSNGHGNGHALSSR-YHSSSHDGSFL 310

gw1.I.1522.18.59187e-3362.37%
jgi|Poptr1_1|172922|gw1.I.1522.1
HSP 1 
Score: 111.694 bits (278), Expect = 8.59187e-33
Identity = 58/93 (62.37%), Postives = 69/93 (74.19%), Query Frame = 1
Query:    7 LTPPTALELVGHSIACGSHQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            L+     ELV HSIAC S+ Y D YY G+M  YG QPL +   +G+  ARM LPLE+A+EPVYVNAKQY GI+RRRQ RAKAE+EKKLIK +K
Sbjct:   89 LSQSPQFELVSHSIACASNPYQDAYYSGMM-AYGHQPLGYPHFVGMPHARMLLPLEVAQEPVYVNAKQYPGIIRRRQQRAKAEVEKKLIKSRK 180

HSP 2 
Score: 45.0542 bits (105), Expect = 8.59187e-33
Identity = 19/23 (82.61%), Postives = 20/23 (86.96%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRH HA+RR R SGGRF
Sbjct:  180 KPYLHESRHQHAIRRERSSGGRF 202

grail3.00240383012.86757e-3058.51%
jgi|Poptr1_1|652752|grail3.0024038301
HSP 1 
Score: 97.0561 bits (240), Expect = 2.86757e-30
Identity = 55/94 (58.51%), Postives = 60/94 (63.83%), Query Frame = 1
Query:    4 YLTPPTALELVGHSIACGSHQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            YL P T LEL GHSI                        VHS+  G +P+RM LP EMAEEPVYVNAKQYHGILRRRQSRAKAELE+KLIK +K
Sbjct:  108 YLGPSTQLELAGHSI------------------------VHSQYAGPNPSRMVLPHEMAEEPVYVNAKQYHGILRRRQSRAKAELERKLIKTRK 177

HSP 2 
Score: 51.2174 bits (121), Expect = 2.86757e-30
Identity = 22/23 (95.65%), Postives = 22/23 (95.65%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRHLHAMRRARG GGRF
Sbjct:  177 KPYLHESRHLHAMRRARGCGGRF 199

estExt_fgenesh4_pg.C_LG_I29036.81377e-2949.04%
jgi|Poptr1_1|815791|estExt_fgenesh4_pg.C_LG_I2903
HSP 1 
Score: 97.0561 bits (240), Expect = 6.81377e-29
Identity = 51/104 (49.04%), Postives = 64/104 (61.54%), Query Frame = 1
Query:    4 YLTPPTALELVGHSIACGSHQYFDPYYGGVMPTYGPQP----------LVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            Y TP       GH++A  ++ Y DPYY  +   Y PQP          +VH + +G+  A +PLP +  EEPV+VNAKQYHGILRRRQSRAKAE E K IK +K
Sbjct:   59 YATPQLG---AGHAMAPATYPYPDPYYRSIFAPYDPQPYPPQPYGAQPMVHLQLMGIQQAGVPLPSDAVEEPVFVNAKQYHGILRRRQSRAKAESESKAIKSRK 159

HSP 2 
Score: 46.595 bits (109), Expect = 6.81377e-29
Identity = 19/23 (82.61%), Postives = 21/23 (91.30%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRH HA++RARG GGRF
Sbjct:  159 KPYLHESRHQHALKRARGCGGRF 181

eugene3.023600048.86787e-2949.04%
jgi|Poptr1_1|588264|eugene3.02360004
HSP 1 
Score: 96.6709 bits (239), Expect = 8.86787e-29
Identity = 51/104 (49.04%), Postives = 64/104 (61.54%), Query Frame = 1
Query:    4 YLTPPTALELVGHSIACGSHQYFDPYYGGVMPT----------YGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            Y TP       GH++A  ++ Y DPYY  +             YG QP+VH + +G+  A +PLP +  EEPV+VNAKQYHGILRRRQSRAKAE E K IK +K
Sbjct:   46 YATPQLG---AGHAMAPAAYPYPDPYYRSIFAPCDAQPYAPQPYGAQPMVHLQLMGIQQAGVPLPSDAVEEPVFVNAKQYHGILRRRQSRAKAESENKAIKSRK 146

HSP 2 
Score: 46.595 bits (109), Expect = 8.86787e-29
Identity = 19/23 (82.61%), Postives = 21/23 (91.30%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRH HA++RARG GGRF
Sbjct:  146 KPYLHESRHQHALKRARGCGGRF 168

eugene3.000117552.26283e-2782.22%
jgi|Poptr1_1|549314|eugene3.00011755
HSP 1 
Score: 79.337 bits (194), Expect = 2.26283e-27
Identity = 37/45 (82.22%), Postives = 43/45 (95.56%), Query Frame = 1
Query:  151 ARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            ARMPLPLEM EEPVYVNAKQ++GI+RRRQ+RAKAELEKK +KV+K
Sbjct:    4 ARMPLPLEMEEEPVYVNAKQFNGIMRRRQARAKAELEKKAVKVRK 48

HSP 2 
Score: 49.2914 bits (116), Expect = 2.26283e-27
Identity = 22/29 (75.86%), Postives = 23/29 (79.31%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF*TQRSL 371
            KPYLHESRH HAMRRARG GGRF   + L
Sbjct:   48 KPYLHESRHQHAMRRARGCGGRFLNTKKL 76

HSP 3 
Score: 30.0314 bits (66), Expect = 2.26283e-27
Identity = 26/81 (32.10%), Postives = 37/81 (45.68%), Query Frame = 2
Query:  350 FLNTKKLGSTDADTAPDKGA--TNPGGAVSTHPINSLHQPQTYPNANGNSCYPHHQGFQFSGYHLHSGDRTGRREYFAGQQ 586
            FLNTKKL    A+   DKG    +  G +     + +   QT+ ++N   C+ +  G   S YH  S D +     F GQQ
Sbjct:   70 FLNTKKLDHNAANPTSDKGTGDLDSSGDLQEGKESMVQDMQTHASSN---CHGNGNGLS-SRYHSLSDDGS-----FLGQQ 141

eugene3.000609804.5871e-2756.58%
jgi|Poptr1_1|561021|eugene3.00060980
HSP 1 
Score: 88.9669 bits (219), Expect = 4.5871e-27
Identity = 43/76 (56.58%), Postives = 57/76 (75.00%), Query Frame = 1
Query:   73 DPYYGGVMPTYGP----QPLVHSRCIGVHPARMPLPLEMAEE-PVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            DPY+GG+   YGP    QP + S  +G+   R+PLPL++A++ P+YVNAKQYHGILRRRQSRAK E + KL+K +K
Sbjct:  142 DPYFGGLFNPYGPHAFIQPQMGSHMVGMTAGRVPLPLDLADDGPIYVNAKQYHGILRRRQSRAKLEAQNKLVKNRK 217

HSP 2 
Score: 48.521 bits (114), Expect = 4.5871e-27
Identity = 20/29 (68.97%), Postives = 24/29 (82.76%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF*TQRSL 371
            KPYLHESRH+HA+ R RGSGGRF + + L
Sbjct:  217 KPYLHESRHIHALNRVRGSGGRFLSTKKL 245

estExt_fgenesh4_pg.C_LG_XVIII00204.36354e-2450.00%
jgi|Poptr1_1|825603|estExt_fgenesh4_pg.C_LG_XVIII0020
HSP 1 
Score: 78.1814 bits (191), Expect = 4.36354e-24
Identity = 39/78 (50.00%), Postives = 55/78 (70.51%), Query Frame = 1
Query:   67 YFDPYYGGVMPTYGP----QPLVHSRCIGVHPARMPLPLEMAEE-PVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            Y DPY+GG+   Y      QP + S  +G+   R+PLP+++A++ P+YVNAKQY GI+RRRQSRAK E + KL+K +K
Sbjct:   30 YADPYFGGLCNPYELHAFIQPHLGSHMVGMTAGRVPLPVDLADDGPIYVNAKQYRGIIRRRQSRAKLEAQNKLVKNRK 107

HSP 2 
Score: 49.2914 bits (116), Expect = 4.36354e-24
Identity = 20/29 (68.97%), Postives = 25/29 (86.21%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF*TQRSL 371
            KPYLHESRH+HA+ R RGSGGRF +++ L
Sbjct:  107 KPYLHESRHIHALNRVRGSGGRFLSKKKL 135

eugene3.000911162.39235e-2166.00%
jgi|Poptr1_1|557856|eugene3.00091116
HSP 1 
Score: 71.633 bits (174), Expect = 2.39235e-21
Identity = 33/50 (66.00%), Postives = 44/50 (88.00%), Query Frame = 1
Query:  136 IGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            +G+  ARM LPLE+A++PV+VNAKQY GI+RRR+ RAKAE++KKLIK +K
Sbjct:  132 VGMPHARMLLPLEVAQDPVFVNAKQYPGIIRRREQRAKAEVDKKLIKARK 181

HSP 2 
Score: 46.595 bits (109), Expect = 2.39235e-21
Identity = 20/23 (86.96%), Postives = 20/23 (86.96%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRH HAMRR R SGGRF
Sbjct:  181 KPYLHESRHRHAMRRERSSGGRF 203

eugene3.000611214.59598e-1942.17%
jgi|Poptr1_1|561162|eugene3.00061121
HSP 1 
Score: 63.5438 bits (153), Expect = 4.59598e-19
Identity = 35/83 (42.17%), Postives = 49/83 (59.04%), Query Frame = 1
Query:   37 GHSIACGSHQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            G  + C  +   D  YG +  T+GPQ  +  R +      +P+     + P+YVNAKQYHGI+RRR+SRAKA LE KL + +K
Sbjct:   75 GQPVICAKYPVVDQCYG-LFSTFGPQ--ISGRIM------LPMSTTTDDVPIYVNAKQYHGIIRRRKSRAKAALENKLPRNRK 148

HSP 2 
Score: 46.9802 bits (110), Expect = 4.59598e-19
Identity = 20/29 (68.97%), Postives = 22/29 (75.86%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF*TQRSL 371
            KPY+H SRHLHAMRR RG GGRF   + L
Sbjct:  148 KPYMHRSRHLHAMRRPRGCGGRFLNTKEL 176

Blast Hits to Contig V2 RO454

Analysis Date: 11-02-2009 (Blast: AB454_contigs_v2_vs_RO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
RO454_contig21568_v25.83113e-4266.67%
RO454_contig21568_v2
HSP 1 
Score: 128.449 bits (274), Expect = 5.83113e-42
Identity = 50/75 (66.67%), Postives = 63/75 (84.00%), Query Frame = 1
Query:   61 HQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            + Y +P+YGG++  YG Q ++ ++  G+H ARMPLPLEM EEPV+VNAKQYHGILRRRQSRAKAEL+KK IKV+K
Sbjct:  142 YMYSEPHYGGMLAPYGHQAMIPAQLYGMHQARMPLPLEMEEEPVFVNAKQYHGILRRRQSRAKAELQKKAIKVRK 366

HSP 2 
Score: 58.3434 bits (121), Expect = 5.83113e-42
Identity = 22/23 (95.65%), Postives = 22/23 (95.65%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRHLHAMRRARG GGRF
Sbjct:   76 KPYLHESRHLHAMRRARGCGGRF 144

HSP 3 
Score: 76.6717 bits (161), Expect = 1.66848e-24
Identity = 38/60 (63.33%), Postives = 40/60 (66.67%), Query Frame = -1
Query:   66 ARDCRRLRIPWYCLAFT*TGSSAISRGKGILAGCTPIQRECTKG*GP*VGITPP*YGSKY 245
            ARDC RLRIP YC AFT TGSS+ISRGKGILA C P        * P*    PP* GS+Y
Sbjct:  182 ARDCLRLRIP*YCFAFTKTGSSSISRGKGILA*CIPYNWAGIIA*CP*GANIPP*CGSEY 361

HSP 4 
Score: 51.4703 bits (106), Expect = 1.66848e-24
Identity = 20/32 (62.50%), Postives = 26/32 (81.25%), Query Frame = -2
Query:  284 STTKLLCVQKRPPEPLALLMACKCRDS*R*GF 379
            S +    ++KRPP+PLALL+AC+CRDS*R GF
Sbjct:   50 SLSGFFVLRKRPPQPLALLIACRCRDS*RYGF 145

HSP 5 
Score: 84.0031 bits (177), Expect = 4.49382e-19
Identity = 34/71 (47.89%), Postives = 48/71 (67.61%), Query Frame = 3
Query:   66 IF*SILWGSYAYLWTSAFGAFSLYWSASR*NALAP*NGRGTCLCECQAVPWNSQATTVTCQG*A*KETNKS 278
            +F + LW +   LW S++    + W+AS *NA   *NGRGTCL +C+A+ W S+  TVTC G*A +E++KS
Sbjct:  149 VFRATLWRNVGSLWASSYDTCPIIWNASG*NAFTS*NGRGTCLRKCKAISWYSETKTVTC*G*ASEESDKS 361

HSP 6 
Score: 25.8106 bits (50), Expect = 4.49382e-19
Identity = 11/17 (64.71%), Postives = 14/17 (82.35%), Query Frame = 2
Query:  287 ALSS*VSAFACHEKSKR 337
            A+SS*VS  AC+E+ KR
Sbjct:   92 AISS*VSTPACYEEGKR 142

HSP 7 
Score: 73.4643 bits (154), Expect = 1.38562e-18
Identity = 36/69 (52.17%), Postives = 45/69 (65.22%), Query Frame = -3
Query:   73 NFY*FLFKLSLGT*LSSPENSMVLLGIHINRFLCHFKGQGHSSGMHSNTTRMHQRLRSISRHNSPIIWI 279
            NFY FL KLSL T*LSS +N+M+LL I+ +RFL HFK   HSS MHS     +  L  I   +S I+W+
Sbjct:  148 NFYRFLLKLSLST*LSSSQNTMILLCIYEDRFLFHFKR*RHSSLMHSI*LGRYHSLMPIRSQHSAIMWL 354

HSP 8 
Score: 29.9345 bits (59), Expect = 1.38562e-18
Identity = 13/19 (68.42%), Postives = 13/19 (68.42%), Query Frame = -3
Query:  283 NLLLFSWHANAETHEDRAF 339
            NLL  S HA  ETHED AF
Sbjct:   90 NLLPSS*HAGVETHEDMAF 146

HSP 9 
Score: 21.6867 bits (41), Expect = 1.38562e-18
Identity = 6/10 (60.00%), Postives = 9/10 (90.00%), Query Frame = -2
Query:  341 KLLCVQKRPP 370
            +LLC++K PP
Sbjct:   58 RLLCIKKAPP 87

HSP 10 
Score: 62.0091 bits (129), Expect = 2.23708e-11
Identity = 31/70 (44.29%), Postives = 38/70 (54.29%), Query Frame = -2
Query:   68 LLLVSFQAQPWHVTVVA*EFHGTAWHSHKQVPLPFQGARAF*RDALQYNENAPKAEVHK*A*LPHNMDQN 277
            LL +S +AQP HVTV   E+H  A H  +QVPLPFQ  +AF* DA          + HK     HN+  N
Sbjct:  150 LLSLSSEAQP*HVTVFVSEYHDIALHLRRQVPLPFQEVKAF*PDAFHIIGQVS*LDAHKEPTFRHNVALN 359

HSP 11 
Score: 21.6867 bits (41), Expect = 2.23708e-11
Identity = 8/11 (72.73%), Postives = 9/11 (81.82%), Query Frame = -1
Query:  291 HGMQMPRLMKI 323
            H MQ+ RLMKI
Sbjct:  106 HSMQVSRLMKI 138

HSP 12 
Score: 63.8419 bits (133), Expect = 6.02799e-11
Identity = 32/62 (51.61%), Postives = 38/62 (61.29%), Query Frame = 2
Query:   59 HINILIHIMGELCLLMDLSLWCILVVLECIPLECPCPLKWQRNLFM*MPSSTMEFSGDDSHV 244
            HI I  HIM E  LLM + L  +   +ECI LEC   LKW+RNL  *M S+ M F  +DSHV
Sbjct:  183 HICIQSHIMAECWLLMGIKL*YLPNYMECIRLECLYLLKWKRNLSS*MQSNIMVF*DEDSHV 368

RO454_contig26393_v22.38455e-3365.52%
RO454_contig26393_v2
HSP 1 
Score: 93.1672 bits (197), Expect = 2.38455e-33
Identity = 38/58 (65.52%), Postives = 46/58 (79.31%), Query Frame = 1
Query:  112 QPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            QP+VH + +G+  A +PLP +  EEPV+VNAKQYHGILRRRQSRAKAE E K IK +K
Sbjct:  479 QPMVHLQLMGIQQAGVPLPSDAVEEPVFVNAKQYHGILRRRQSRAKAESEHKAIKSRK 652

HSP 2 
Score: 56.9688 bits (118), Expect = 2.38455e-33
Identity = 21/23 (91.30%), Postives = 22/23 (95.65%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRHLHA+RRARG GGRF
Sbjct:  413 KPYLHESRHLHALRRARGCGGRF 481

HSP 3 
Score: 25.8106 bits (50), Expect = 2.38455e-33
Identity = 9/18 (50.00%), Postives = 10/18 (55.56%), Query Frame = 1
Query:   67 YFDPYYGGVMPTYGPQPL 120
            Y DPYY  +   Y  QPL
Sbjct:  676 YPDPYYRSIFAPYDAQPL 729

HSP 4 
Score: 54.2195 bits (112), Expect = 8.82877e-16
Identity = 26/44 (59.09%), Postives = 27/44 (61.36%), Query Frame = -1
Query:  114 ARDCRRLRIPWYCLAFT*TGSSAISRGKGILAGCTPIQRECTKG 245
            ARDCRR R+P YC AFT TGSS  S GKG  A   PI    T G
Sbjct:  519 ARDCRRRRMP*YCFAFTNTGSSTASDGKGTPACWIPIN*RWTIG 650

HSP 5 
Score: 44.5971 bits (91), Expect = 8.82877e-16
Identity = 17/25 (68.00%), Postives = 20/25 (80.00%), Query Frame = -2
Query:  284 VQKRPPEPLALLMACKCRDS*R*GF 358
            ++ RPP PLALL ACKCRDS + GF
Sbjct:  408 LRNRPPHPLALLSACKCRDSCKYGF 482

RO454_contig2056_v29.61884e-2772.73%
RO454_contig2056_v2
HSP 1 
Score: 63.3837 bits (132), Expect = 9.61884e-27
Identity = 24/33 (72.73%), Postives = 28/33 (84.85%), Query Frame = 1
Query:  187 PVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            P+YVN KQYHGILRRRQSRAK E + KL+K +K
Sbjct:  282 PIYVNPKQYHGILRRRQSRAKLEAQNKLVKARK 380

HSP 2 
Score: 51.0121 bits (105), Expect = 9.61884e-27
Identity = 18/23 (78.26%), Postives = 20/23 (86.96%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRH HA+ R RG+GGRF
Sbjct:  378 KPYLHESRHRHALNRTRGTGGRF 446

HSP 3 
Score: 30.8509 bits (61), Expect = 9.61884e-27
Identity = 10/28 (35.71%), Postives = 19/28 (67.86%), Query Frame = 1
Query:   40 HSIACGSHQYFDPYYGGVMPTYGPQPLV 123
            +S+A   + Y +P +GG++  YGPQ ++
Sbjct:  144 YSMARVXYPYAEPCFGGLLTAYGPQAIM 227

HSP 4 
Score: 25.3524 bits (49), Expect = 9.61884e-27
Identity = 8/16 (50.00%), Postives = 13/16 (81.25%), Query Frame = 1
Query:  136 IGVHPARMPLPLEMAE 183
            +G+ PAR+PLPL+  +
Sbjct:  228 MGMAPARVPLPLDFTD 275

Blast Hits to TAIR7 Peptides

Analysis Date: 11-02-2009 (Blast: AB454_contigs_v2_vs_TAIR7_pep_20070425)
Best 10 Hits Shown | Show Best 25 Hits
Note: Click a description for more details.
Match Name E value Identity
AT3G20910.1 2.29694e-3259.38%
CCAAT-binding transcription factor (CBF-B/NF-YA) family protein | chr3:7326501-7328375 FORWARD
HSP 1 
Score: 107.457 bits (267), Expect = 2.29694e-32
Identity = 57/96 (59.38%), Postives = 67/96 (69.79%), Query Frame = 1
Query:    1 GYLTPPTALELVGHSIA-CGSHQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            G   PP   +LVGH++    S+ Y DPYY GVM  YG  PL      G+  +RMPLP EMA+EPV+VNAKQY  ILRRRQ+RAKAELEKKLIK +K
Sbjct:  104 GITQPPPHPQLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQEPVFVNAKQYQAILRRRQARAKAELEKKLIKSRK 199

HSP 2 
Score: 47.7506 bits (112), Expect = 2.29694e-32
Identity = 20/23 (86.96%), Postives = 21/23 (91.30%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRH HAMRR RG+GGRF
Sbjct:  199 KPYLHESRHQHAMRRPRGTGGRF 221

AT5G12840.3 2.30077e-3261.63%
HAP2A (EMBRYO DEFECTIVE 2220); transcription factor | chr5:4051150-4052964 REVERSE
HSP 1 
Score: 106.686 bits (265), Expect = 2.30077e-32
Identity = 53/86 (61.63%), Postives = 65/86 (75.58%), Query Frame = 1
Query:   28 ELVGHSIACGSHQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            ELVGH IAC  + Y DPYYGG+M  YG Q L     +G+   R  LPL+MA+EPVYVNAKQY GILRRR++RAKAELE+K+I+ +K
Sbjct:  120 ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQYEGILRRRKARAKAELERKVIRDRK 205

HSP 2 
Score: 48.521 bits (114), Expect = 2.30077e-32
Identity = 21/23 (91.30%), Postives = 21/23 (91.30%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRH HAMRRAR SGGRF
Sbjct:  205 KPYLHESRHKHAMRRARASGGRF 227

AT5G12840.1 2.30077e-3261.63%
HAP2A (EMBRYO DEFECTIVE 2220); transcription factor | chr5:4051150-4052964 REVERSE
HSP 1 
Score: 106.686 bits (265), Expect = 2.30077e-32
Identity = 53/86 (61.63%), Postives = 65/86 (75.58%), Query Frame = 1
Query:   28 ELVGHSIACGSHQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            ELVGH IAC  + Y DPYYGG+M  YG Q L     +G+   R  LPL+MA+EPVYVNAKQY GILRRR++RAKAELE+K+I+ +K
Sbjct:  120 ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQYEGILRRRKARAKAELERKVIRDRK 205

HSP 2 
Score: 48.521 bits (114), Expect = 2.30077e-32
Identity = 21/23 (91.30%), Postives = 21/23 (91.30%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRH HAMRRAR SGGRF
Sbjct:  205 KPYLHESRHKHAMRRARASGGRF 227

AT5G12840.4 2.30119e-3261.63%
HAP2A (EMBRYO DEFECTIVE 2220); transcription factor | chr5:4051150-4052964 REVERSE
HSP 1 
Score: 106.686 bits (265), Expect = 2.30119e-32
Identity = 53/86 (61.63%), Postives = 65/86 (75.58%), Query Frame = 1
Query:   28 ELVGHSIACGSHQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            ELVGH IAC  + Y DPYYGG+M  YG Q L     +G+   R  LPL+MA+EPVYVNAKQY GILRRR++RAKAELE+K+I+ +K
Sbjct:  119 ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQYEGILRRRKARAKAELERKVIRDRK 204

HSP 2 
Score: 48.521 bits (114), Expect = 2.30119e-32
Identity = 21/23 (91.30%), Postives = 21/23 (91.30%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRH HAMRRAR SGGRF
Sbjct:  204 KPYLHESRHKHAMRRARASGGRF 226

AT5G12840.2 2.30119e-3261.63%
HAP2A (EMBRYO DEFECTIVE 2220); transcription factor | chr5:4051150-4052964 REVERSE
HSP 1 
Score: 106.686 bits (265), Expect = 2.30119e-32
Identity = 53/86 (61.63%), Postives = 65/86 (75.58%), Query Frame = 1
Query:   28 ELVGHSIACGSHQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            ELVGH IAC  + Y DPYYGG+M  YG Q L     +G+   R  LPL+MA+EPVYVNAKQY GILRRR++RAKAELE+K+I+ +K
Sbjct:  119 ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQYEGILRRRKARAKAELERKVIRDRK 204

HSP 2 
Score: 48.521 bits (114), Expect = 2.30119e-32
Identity = 21/23 (91.30%), Postives = 21/23 (91.30%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRH HAMRRAR SGGRF
Sbjct:  204 KPYLHESRHKHAMRRARASGGRF 226

AT1G30500.2 2.2555e-2551.81%
CCAAT-binding transcription factor (CBF-B/NF-YA) family protein | chr1:10804718-10805878 REVERSE
HSP 1 
Score: 83.9593 bits (206), Expect = 2.2555e-25
Identity = 43/83 (51.81%), Postives = 56/83 (67.47%), Query Frame = 1
Query:   40 HSIACGSHQYFDPYYGGVM-PTYGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            +S+A G + Y DPYY  +  P   P   VH + +GV    +PLP +  EEPV+VNAKQYHGILRRRQSRA+ E + K+IK +K
Sbjct:   51 NSMAPGQYPYPDPYYRSIFAPPPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYHGILRRRQSRARLESQNKVIKSRK 133

HSP 2 
Score: 47.7506 bits (112), Expect = 2.2555e-25
Identity = 20/23 (86.96%), Postives = 21/23 (91.30%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRHLHA+RR RG GGRF
Sbjct:  133 KPYLHESRHLHAIRRPRGCGGRF 155

AT1G30500.1 3.82163e-2550.00%
CCAAT-binding transcription factor (CBF-B/NF-YA) family protein | chr1:10804718-10805878 REVERSE
HSP 1 
Score: 83.1889 bits (204), Expect = 3.82163e-25
Identity = 41/82 (50.00%), Postives = 56/82 (68.29%), Query Frame = 1
Query:   40 HSIACGSHQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            +S+A G + Y DPYY  +   + P P  ++  +GV    +PLP +  EEPV+VNAKQYHGILRRRQSRA+ E + K+IK +K
Sbjct:   51 NSMAPGQYPYPDPYYRSI---FAPPPQPYTGLMGVQQQGVPLPSDAVEEPVFVNAKQYHGILRRRQSRARLESQNKVIKSRK 129

HSP 2 
Score: 47.7506 bits (112), Expect = 3.82163e-25
Identity = 20/23 (86.96%), Postives = 21/23 (91.30%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRHLHA+RR RG GGRF
Sbjct:  129 KPYLHESRHLHAIRRPRGCGGRF 151

AT1G72830.2 1.08175e-2451.85%
HAP2C (Heme activator protein (yeast) homolog 2C); transcription factor | chr1:27409361-27410750 REVERSE
HSP 1 
Score: 82.8037 bits (203), Expect = 1.08175e-24
Identity = 42/81 (51.85%), Postives = 57/81 (70.37%), Query Frame = 1
Query:   58 SHQYFDPYYGGVMP-TYGPQ-PLVHSRCIGVHPARMPLPLEMAE-EPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKKSP 291
            S  Y DP+YGG++  TY PQ P  + + + + P R+PLP E+ E +PV+VNAKQYH I+RRRQ RAK E + KLI+ +K P
Sbjct:  134 SFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETDPVFVNAKQYHAIMRRRQQRAKLEAQNKLIRARKVP 214

HSP 2 
Score: 46.595 bits (109), Expect = 1.08175e-24
Identity = 19/29 (65.52%), Postives = 24/29 (82.76%), Query Frame = 3
Query:  288 PYLHESRHLHAMRRARGSGGRF*TQRSLV 374
            PYLHESRH+HA++R RGSGGRF   + L+
Sbjct:  214 PYLHESRHVHALKRPRGSGGRFLNTKKLL 242

AT1G72830.1 1.08193e-2451.90%
HAP2C (Heme activator protein (yeast) homolog 2C); transcription factor | chr1:27409361-27410750 REVERSE
HSP 1 
Score: 80.8777 bits (198), Expect = 1.08193e-24
Identity = 41/79 (51.90%), Postives = 56/79 (70.89%), Query Frame = 1
Query:   58 SHQYFDPYYGGVMP-TYGPQ-PLVHSRCIGVHPARMPLPLEMAE-EPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            S  Y DP+YGG++  TY PQ P  + + + + P R+PLP E+ E +PV+VNAKQYH I+RRRQ RAK E + KLI+ +K
Sbjct:  134 SFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETDPVFVNAKQYHAIMRRRQQRAKLEAQNKLIRARK 212

HSP 2 
Score: 48.521 bits (114), Expect = 1.08193e-24
Identity = 20/30 (66.67%), Postives = 25/30 (83.33%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF*TQRSLV 374
            KPYLHESRH+HA++R RGSGGRF   + L+
Sbjct:  212 KPYLHESRHVHALKRPRGSGGRFLNTKKLL 241

AT1G54160.1 1.1049e-2343.68%
CCAAT-binding transcription factor (CBF-B/NF-YA) family protein | chr1:20221248-20222373 REVERSE
HSP 1 
Score: 68.1662 bits (165), Expect = 1.1049e-23
Identity = 38/87 (43.68%), Postives = 53/87 (60.92%), Query Frame = 1
Query:   34 VGHSIACGSHQYFDPYYGGVMPTYGPQP--LVHSRCIGVHPARMPLPLEMAE-EPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            +  S+ C    +F+   G + P Y   P  L H   +G+  +R+PLP  + E EP++VNAKQYH ILRRR+ RAK E + KLIK +K
Sbjct:  128 ISWSLQCAETSHFN---GFLAPEYASTPTALPHLEMMGLVSSRVPLPHHIQENEPIFVNAKQYHAILRRRKHRAKLEAQNKLIKCRK 211

HSP 2 
Score: 51.2174 bits (121), Expect = 1.1049e-23
Identity = 22/29 (75.86%), Postives = 25/29 (86.21%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF*TQRSL 371
            KPYLHESRHLHA++RARGSGGRF   + L
Sbjct:  211 KPYLHESRHLHALKRARGSGGRFLNTKKL 239

HSP 3 
Score: 26.5646 bits (57), Expect = 1.1049e-23
Identity = 21/64 (32.81%), Postives = 29/64 (45.31%), Query Frame = 2
Query:  350 FLNTKKLGSTDADTAPDKGATNPGGAVSTHPINS-LHQPQTYPNANGNSCYPHHQG--FQFSGY 532
            FLNTKKL  +       + A     ++S H   S +      P++N N C    Q   F+FSGY
Sbjct:  233 FLNTKKLQESSNSLCSSQMANGQNFSMSPHGGGSGIGSSSISPSSNSN-CINMFQNPQFRFSGY 295

Blast Hits to Contigs V2 WO454

Analysis Date: 11-02-2009 (Blast: AB454_contigs_v2_vs_WO454_contigs_v2)
Best 10 Hits Shown
Note: Click a description for more details.
Match Name E value Identity
WO454_contig6173_v22.94766e-3669.57%
WO454_contig6173_v2
HSP 1 
Score: 121.118 bits (258), Expect = 2.94766e-36
Identity = 48/69 (69.57%), Postives = 59/69 (85.51%), Query Frame = 1
Query:   79 YYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            +YGG++  YG Q ++ ++  G+H ARMPLPLEM EEPV+VNAKQYHGILRRRQSRAKAEL+KK IKV+K
Sbjct:   49 HYGGMLAPYGHQAMIPAQLYGMHQARMPLPLEMEEEPVFVNAKQYHGILRRRQSRAKAELQKKAIKVRK 255

HSP 2 
Score: 45.5136 bits (93), Expect = 2.94766e-36
Identity = 17/17 (100.00%), Postives = 17/17 (100.00%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRAR 335
            KPYLHESRHLHAMRRAR
Sbjct:    1 KPYLHESRHLHAMRRAR 51

HSP 3 
Score: 69.3404 bits (145), Expect = 9.42417e-18
Identity = 35/55 (63.64%), Postives = 36/55 (65.45%), Query Frame = -1
Query:   81 ARDCRRLRIPWYCLAFT*TGSSAISRGKGILAGCTPIQRECTKG*GP*VGITPP* 245
            ARDC RLRIP YC AFT TGSS+ISRGKGILA C P        * P*    PP*
Sbjct:   89 ARDCLRLRIP*YCFAFTKTGSSSISRGKGILA*CIPYNWAGIIA*CP*GANIPP* 253

HSP 4 
Score: 34.9748 bits (70), Expect = 9.42417e-18
Identity = 14/17 (82.35%), Postives = 16/17 (94.12%), Query Frame = -2
Query:  284 LALLMACKCRDS*R*GF 334
            LALL+AC+CRDS*R GF
Sbjct:    2 LALLIACRCRDS*RYGF 52

HSP 5 
Score: 79.8792 bits (168), Expect = 1.75792e-17
Identity = 32/66 (48.48%), Postives = 44/66 (66.67%), Query Frame = 3
Query:   81 LWGSYAYLWTSAFGAFSLYWSASR*NALAP*NGRGTCLCECQAVPWNSQATTVTCQG*A*KETNKS 278
            LW +   LW S++    + W+AS  NA   *NGRGTCL +C+A+ W S+  TVTC G*A +E++KS
Sbjct:   56 LWXNVGSLWASSYDTCPIIWNASGXNAFTS*NGRGTCLRKCKAISWYSETKTVTC*G*ASEESDKS 253

HSP 6 
Score: 23.5196 bits (45), Expect = 1.75792e-17
Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = 2
Query:  287 ALSS*VSAFACHEKSK 334
            A+SS*VS  AC+E+ K
Sbjct:    2 AISS*VSTPACYEEGK 49

HSP 7 
Score: 65.2165 bits (136), Expect = 1.27788e-12
Identity = 34/67 (50.75%), Postives = 42/67 (62.69%), Query Frame = -3
Query:   79 NFY*FLFKLSLGT*LSSPENSMVLLGIHINRFLCHFKGQGHSSGMHSNTTRMHQRLRSISRHNSPII 279
            NFY FL KLSL T*LSS +N+M+LL I+ +RFL HFK   HS  MHS     +  L  I   +S I+
Sbjct:   55 NFYRFLLKLSLST*LSSSQNTMILLCIYEDRFLFHFKR*RHSXLMHSI*LGRYHSLMPIRSQHSXIM 255

HSP 8 
Score: 21.6867 bits (41), Expect = 1.27788e-12
Identity = 8/11 (72.73%), Postives = 9/11 (81.82%), Query Frame = -1
Query:  291 HGMQMPRLMKI 323
            H MQ+ RLMKI
Sbjct:   13 HSMQVSRLMKI 45

WO454_contig16403_v21.7466e-3571.21%
WO454_contig16403_v2
HSP 1 
Score: 110.579 bits (235), Expect = 1.7466e-35
Identity = 47/66 (71.21%), Postives = 55/66 (83.33%), Query Frame = 1
Query:   88 GVMPTYGPQPLVHSRCIGVHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            G++  YG QP  +   +G+  ARMPLPLEMA+EPVYVNAKQY GILRRRQ+RAKAELEKKLIKV+K
Sbjct:  576 GMIAAYGHQPYGYPPFLGMPHARMPLPLEMAQEPVYVNAKQYQGILRRRQARAKAELEKKLIKVRK 773

HSP 2 
Score: 54.2195 bits (112), Expect = 1.7466e-35
Identity = 20/23 (86.96%), Postives = 21/23 (91.30%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRH HAMRR RG+GGRF
Sbjct:  510 KPYLHESRHQHAMRRERGTGGRF 578

HSP 3 
Score: 78.0464 bits (164), Expect = 7.23067e-22
Identity = 34/64 (53.12%), Postives = 41/64 (64.06%), Query Frame = -3
Query:   88 NFY*FLFKLSLGT*LSSPENSMVLLGIHINRFLCHFKGQGHSSGMHSNTTRMHQRLRSISRHNS 279
            NFY  LFKL   T LS P+N++VL  IHINR LCH +GQ HS   HS   R+  RL  IS ++S
Sbjct:  582 NFYQLLFKLGFSTCLSPPQNTLVLFSIHINRLLCHLEGQRHSGMRHSKKRRITIRLMPISCYHS 773

HSP 4 
Score: 40.9315 bits (83), Expect = 7.23067e-22
Identity = 17/23 (73.91%), Postives = 19/23 (82.61%), Query Frame = -2
Query:  284 KRPPEPLALLMACKCRDS*R*GF 352
            KRPP PL+LL+AC C DS*R GF
Sbjct:  511 KRPPVPLSLLIAC*CLDS*RYGF 579

HSP 5 
Score: 69.7986 bits (146), Expect = 7.27458e-13
Identity = 29/32 (90.62%), Postives = 29/32 (90.62%), Query Frame = -1
Query:  150 ARDCRRLRIPWYCLAFT*TGSSAISRGKGILA 245
            AR C RLRIPWYCLAFT*TGS AISRGKGILA
Sbjct:  616 ARACLRLRIPWYCLAFT*TGSCAISRGKGILA 711

HSP 6 
Score: 66.5912 bits (139), Expect = 6.71969e-12
Identity = 33/66 (50.00%), Postives = 40/66 (60.61%), Query Frame = 3
Query:   87 GSYAYLWTSAFGAFSLYWSASR*NALAP*NGRGTCLCECQAVPWNSQATTVTCQG*A*KETNKS*E 284
            G+ + LW SA    S  W+AS  NA AP +G   CLCEC  VP  S+A T TC   A*KE +KS*+
Sbjct:  577 GNDSSLWASALWLSSFSWNASCQNAFAPRDGTRACLCEC*TVPRYSEAETGTC*SRA*KEVDKS*K 774

HSP 7 
Score: 63.3837 bits (132), Expect = 6.20713e-11
Identity = 31/60 (51.67%), Postives = 39/60 (65.00%), Query Frame = -2
Query:  101 *LLLVSFQAQPWHVTVVA*EFHGTAWHSHKQVPLPFQGARAF*RDALQYNENAPKAEVHK 280
            *LL  SFQA+  HV V A E+ GT  HSHKQ  +P +GA+AF  +A Q  E+  KA+ HK
Sbjct:  581 *LLSTSFQARL*HVPVSASEYLGTV*HSHKQALVPSRGAKAFWHEAFQEKEDNHKADAHK 760

WO454_contig21267_v23.34123e-3172.73%
WO454_contig21267_v2
HSP 1 
Score: 63.3837 bits (132), Expect = 3.34123e-31
Identity = 24/33 (72.73%), Postives = 28/33 (84.85%), Query Frame = 1
Query:  187 PVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            P+YVN KQYHGILRRRQSRAK E + KL+K +K
Sbjct:   76 PIYVNPKQYHGILRRRQSRAKLEAQNKLVKARK 174

HSP 2 
Score: 53.7613 bits (111), Expect = 3.34123e-31
Identity = 18/48 (37.50%), Postives = 33/48 (68.75%), Query Frame = 1
Query:   40 HSIACGSHQYFDPYYGGVMPTYGPQPLVHSRCIGVHPARMPLPLEMAE 183
            +S+A   + Y +P +GG++  YGPQ ++  + +G+ PAR+PLPL+  +
Sbjct:  181 YSMARVPYPYAEPCFGGLLTAYGPQAIIRPQMMGMAPARVPLPLDFTD 324

HSP 3 
Score: 51.0121 bits (105), Expect = 3.34123e-31
Identity = 18/23 (78.26%), Postives = 20/23 (86.96%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRH HA+ R RG+GGRF
Sbjct:   10 KPYLHESRHRHALNRTRGTGGRF 78

WO454_contig20831_v28.21118e-2768.75%
WO454_contig20831_v2
HSP 1 
Score: 78.9628 bits (166), Expect = 8.21118e-27
Identity = 33/48 (68.75%), Postives = 38/48 (79.17%), Query Frame = 1
Query:  142 VHPARMPLPLEMAEEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            +  A +PLP +  EEPV+VNAKQYHGILRRRQSRAKAE E K IK +K
Sbjct:    3 IQQAGVPLPSDAVEEPVFVNAKQYHGILRRRQSRAKAESEHKAIKSRK 146

HSP 2 
Score: 56.9688 bits (118), Expect = 8.21118e-27
Identity = 21/23 (91.30%), Postives = 22/23 (95.65%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF 353
            KPYLHESRHLHA+RRARG GGRF
Sbjct:  144 KPYLHESRHLHALRRARGCGGRF 212

HSP 3 
Score: 51.0121 bits (105), Expect = 7.06525e-15
Identity = 21/29 (72.41%), Postives = 22/29 (75.86%), Query Frame = -1
Query:  159 ARDCRRLRIPWYCLAFT*TGSSAISRGKG 245
            ARDCRR R+P YC AFT TGSS  S GKG
Sbjct:   20 ARDCRRRRMP*YCFAFTNTGSSTASDGKG 106

HSP 4 
Score: 44.5971 bits (91), Expect = 7.06525e-15
Identity = 17/25 (68.00%), Postives = 20/25 (80.00%), Query Frame = -2
Query:  284 VQKRPPEPLALLMACKCRDS*R*GF 358
            ++ RPP PLALL ACKCRDS + GF
Sbjct:  143 LRNRPPHPLALLSACKCRDSCKYGF 217

WO454_contig17023_v22.95813e-2268.57%
WO454_contig17023_v2
HSP 1 
Score: 60.6344 bits (126), Expect = 2.95813e-22
Identity = 24/35 (68.57%), Postives = 28/35 (80.00%), Query Frame = 1
Query:  181 EEPVYVNAKQYHGILRRRQSRAKAELEKKLIKVKK 285
            +EP+YVN KQYH ILRRRQ RAK E + KLIK +K
Sbjct:   17 DEPIYVNKKQYHAILRRRQFRAKLEAQNKLIKSRK 121

HSP 2 
Score: 59.2598 bits (123), Expect = 2.95813e-22
Identity = 22/29 (75.86%), Postives = 26/29 (89.66%), Query Frame = 3
Query:  285 KPYLHESRHLHAMRRARGSGGRF*TQRSL 371
            KPYLHESRHLHA++RARGSGGRF  ++ L
Sbjct:  119 KPYLHESRHLHALKRARGSGGRFLNKKKL 205

HSP 3 
Score: 41.8479 bits (85), Expect = 6.69736e-11
Identity = 17/37 (45.95%), Postives = 25/37 (67.57%), Query Frame = -2
Query:  272 ISTTKLLCVQKRPPEPLALLMACKCRDS*R*GFS*LL 382
            + ++    ++KRPP+PLAL  A +CRDS*R G   L+
Sbjct:  106 LDSSSFFLLRKRPPDPLALFNAWRCRDS*RYGLRLLM 216

HSP 4 
Score: 39.5569 bits (80), Expect = 6.69736e-11
Identity = 15/23 (65.22%), Postives = 17/23 (73.91%), Query Frame = -1
Query:  177 ARDCRRLRIPWYCLAFT*TGSSA 245
            AR+C RLRI WYC   T* GSS+
Sbjct:   13 ARNCLRLRIAWYCFLLT*MGSSS 81

tags